Pregenerated sensors for TRMT2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022721Ensembl transcript IDs: ENSMUST00000100099.10, ENSMUST00000115640.8, ENSMUST00000128045.3, ENSMUST00000140206.8, ENSMUST00000145112.9, ENSMUST00000231509.2, ENSMUST00000232293.2
Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTaGCCTCCCTGTCTCTTACAGGTGGGTCTTATATGTACAGTCATG | + |
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Preference number: 1 (lower is better) Translates to: PRHCQQVLPHIPGLQ*PPCLLQVGLICTVM Trigger: CATGACTGTACATATAAGACCCACCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR GCA 90 bp | TTATATGTACAGTCATGCTGCAAGGGTGGGGAGCCTGTGCTGATGTaGTTCTGTGTGTTGGCCAAGGCTGTAGGGTGTACCCTGATGGTC | + |
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Preference number: 1 (lower is better) Translates to: LYVQSCCKGGEPVLM*FCVLAKAVGCTLMV Trigger: GACCATCAGGGTACACCCTACAGCCTTGGCCAACACACAGAAGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTGTACATATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR GCA 90 bp | TTGGGGTGTTGTTGCATCCTCTCAAACAGGATAAGCATCTCACAGTaGGGAGTCTGTGGGAACAGGTCCACTGCCACAGCCTTGACTGGA | + |
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Preference number: 1 (lower is better) Translates to: LGCCCILSNRISISQ*GVCGNRSTATALTG Trigger: TCCAGTCAAGGCTGTGGCAGTGGACCTGTTCCCACAGACTCCGCACTGTGAGATGCTTATCCTGTTTGAGAGGATGCAACAACACCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR CCA 90 bp | TTGCATCCTCTCAAACAGGATAAGCATCTCACAGTGCGGAGTCTGTaGGAACAGGTCCACTGCCACAGCCTTGACTGGATGGAATGGGGT | + |
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Preference number: 1 (lower is better) Translates to: LHPLKQDKHLTVRSL*EQVHCHSLDWMEWG Trigger: ACCCCATTCCATCCAGTCAAGGCTGTGGCAGTGGACCTGTTCCCACAGACTCCGCACTGTGAGATGCTTATCCTGTTTGAGAGGATGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR CCA 90 bp | ACACTCTACATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATaGGTGACATGTGCTGTTAGAAAGATAAGATGGCAACTGTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: TLYILSVSNHVPEDT*VTCAVRKIRWQLWA Trigger: GGCCCACAGTTGCCATCTTATCTTTCTAACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGTAGAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR TCA 90 bp | TCCTATACTTCCCTTATGAGAGGGAAATCTCTGTTTCCTGTGGAGTaGTATCAGGAAGATTTCTTGGGGTCTGAAATTCTTGATGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SYTSLMRGKSLFPVE*YQEDFLGSEILDAP Trigger: TGGAGCATCAAGAATTTCAGACCCCAAGAAATCTTCCTGATATCACTCCACAGGAAACAGAGATTTCCCTCTCATAAGGGAAGTATAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR CCA 90 bp | CAGAAAGGATTGTCCAAGGTGGCAAGTAGGAATGAGTTAAGGCTCTaGTTCACCACAGAAATGTTAGTAAAATCAGCAATTGTTTATTCT | + |
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Preference number: 1 (lower is better) Translates to: QKGLSKVASRNELRL*FTTEMLVKSAIVYS Trigger: AGAATAAACAATTGCTGATTTTACTAACATTTCTGTGGTGAACCAGAGCCTTAACTCATTCCTACTTGCCACCTTGGACAATCCTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR-3UTR GCA 90 bp | AACTGTGGGCCTCCCAACAGCATCTTCCTCCTCCTTAATCATGTGTGTGACAGCTATGTACAGTCATGCTaGAAGGGTGGGGAGCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: NCGPPNSIFLLLNHVCDSYVQSC*KGGEPV Trigger: CACAGGCTCCCCACCCTTGCAGCATGACTGTACATA...GCTGTCACACACATGATTAAGGAGGAGGAAGATGCTGTTGGGAGGCCCACAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR CAA 90 bp | CTGAAATTCTTGATGCTCCAGGGCTTCTATGCCATTGGGGTGTTGTaGCATCCTCTCAAACAGGATAAGCATCTCACAGTGCGGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LKFLMLQGFYAIGVL*HPLKQDKHLTVRSL Trigger: CAGACTCCGCACTGTGAGATGCTTATCCTGTTTGAGAGGATGCAACAACACCCCAATGGCATAGAAGCCCTGGAGCATCAAGAATTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR CAA 90 bp | GGTCTGAAATTCTTGATGCTCCAGGGCTTCTATGCCATTGGGGTGTaGTTGCATCCTCTCAAACAGGATAAGCATCTCACAGTGCGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GLKFLMLQGFYAIGV*LHPLKQDKHLTVRS Trigger: ACTCCGCACTGTGAGATGCTTATCCTGTTTGAGAGGATGCAACAACACCCCAATGGCATAGAAGCCCTGGAGCATCAAGAATTTCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAATCTCTGTTTCCTGTGGAGTGATATCAGGAAGATTTCTTGGGGTCTGAAAACAGTGCGGAGTCTGTaGGAACAGGTCCACTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GNLCFLWSDIRKISWGLKTVRSL*EQVHCH Trigger: GTGGCAGTGGACCTGTTCCCACAGACTCCGCACTGT...TTTCAGACCCCAAGAAATCTTCCTGATATCACTCCACAGGAAACAGAGATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR CAA 90 bp | TTCCTGTGGAGTGATATCAGGAAGATTTCTTGGGGTCTGAAATTCTaGATGCTCCAGGGCTTCTATGCCATTGGGGTGTTGTTGCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: FLWSDIRKISWGLKF*MLQGFYAIGVLLHP Trigger: AGGATGCAACAACACCCCAATGGCATAGAAGCCCTGGAGCATCAAGAATTTCAGACCCCAAGAAATCTTCCTGATATCACTCCACAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGGTGGGTCTTATATGTACATGTACCCTGATGGTCTaGACACATAAAACTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: IPGLQCPPCLLQVGLICTCTLMV*THKTVQ Trigger: TTGGACAGTTTTATGTGTTCAGACCATCAGGGTACA...TGTACATATAAGACCCACCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGAAAAAGCATATGGTAATGGTGGTATCTCTGCAGCCTCACCGACCCAGGCACCTGGAATACCTGGGTaGTGTTTGGTCCTAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: IEKAYGNGGISAASPTQAPGIPG*CLVLKH Trigger: ATGTTTTAGGACCAAACACCACCCAGGTATTCCAGG...TGCCTGGGTCGGTGAGGCTGCAGAGATACCACCATTACCATATGCTTTTTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR CAA 90 bp | GGGAATGGCTGGTTTCTTTCTTCTGATGGGAGTGCTGGATCTGATTaGTGGATCTTCAACTGGCCAAGGTTGTCTATAGTCAATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: GNGWFLSSDGSAGSD*WIFNWPRLSIVNCV Trigger: AACACAATTGACTATAGACAACCTTGGCCAGTTGAAGATCCACAAATCAGATCCAGCACTCCCATCAGAAGAAAGAAACCAGCCATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR CAA 90 bp | GATGGGAGTGCTGGATCTGATTTGTGGATCTTCAACTGGCCAAGGTaGTCTATAGTCAATTGTGTTTTTAAGTGCCTTAGTGGACACACT | + |
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Preference number: 2 (lower is better) Translates to: DGSAGSDLWIFNWPR*SIVNCVFKCLSGHT Trigger: AGTGTGTCCACTAAGGCACTTAAAAACACAATTGACTATAGACAACCTTGGCCAGTTGAAGATCCACAAATCAGATCCAGCACTCCCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR-3UTR GCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATAAGCATCTCACAGTaGGGAGTCTGTGGGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLISISQ*GVCGNR Trigger: CCTGTTCCCACAGACTCCGCACTGTGAGATGCTTAT...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATTTTGGTCCTAAAACATaGTTCTCTGGGGCTAAATTC | + |
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Preference number: 2 (lower is better) Translates to: EGLHSTSSVSLTMYLKIHFGPKT*FSGAKF Trigger: GAATTTAGCCCCAGAGAACCATGTTTTAGGACCAAA...ATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR-3UTR TCA 90 bp | TATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCATGTATTGTGTTCAGTCTTTTaGCTAACCATTGCCCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: YYLFRGATLYILSVSNHVLCSVF*LTIALK Trigger: TTTAAGGGCAATGGTTAGTCAAAAGACTGAACACAA...TACATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTCCTGTGCTCCTATACTTCCCTTATGAGAGGGAAATCTCTGTTTCCTGTATCAGGAAGATTTCTTaGGGTCTGAAATTCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: SFPVLLYFPYEREISVSCIRKIS*GLKFLM Trigger: CATCAAGAATTTCAGACCCCAAGAAATCTTCCTGAT...ACAGGAAACAGAGATTTCCCTCTCATAAGGGAAGTATAGGAGCACAGGAAAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR GCA 72 bp | TGCAGCCTCACCGACCCAGGCACTGTCAACAGGTGCTaGCACACATTCCTGGTCTCCAGTGCCCTCCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: CSLTDPGTVNRC*HTFLVSSALPV Trigger: GACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR CCA 72 bp | ACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTaGTCTCCAGTGCCCTCCCTGTCTCTTACAGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: TQALSTGAATHS*SPVPSLSLTGG Trigger: CCCACCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR GCA 72 bp | CAGTCATGCTGCAAGGGTGGGGAGCCTGTGCTGATGTaGTTCTGTGTGTTGGCCAAGGCTGTAGGGTGTACC | + |
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Preference number: 3 (lower is better) Translates to: QSCCKGGEPVLM*FCVLAKAVGCT Trigger: GGTACACCCTACAGCCTTGGCCAACACACAGAAGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR CCA 72 bp | TTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGGTaGGTCTTATATGTACAGTCATGCTGCAAGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: FLVSSALPVSYR*VLYVQSCCKGG Trigger: CCCACCCTTGCAGCATGACTGTACATATAAGACCCACCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR GCA 72 bp | TGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTaGCCTCCCTGTCTCTTACAGGTGGGTCTTATATGT | + |
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Preference number: 3 (lower is better) Translates to: CQQVLPHIPGLQ*PPCLLQVGLIC Trigger: ACATATAAGACCCACCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR GCA 72 bp | GTCTCTTACAGGTGGGTCTTATATGTACAGTCATGCTaGAAGGGTGGGGAGCCTGTGCTGATGTGCTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VSYRWVLYVQSC*KGGEPVLMCFC Trigger: ACAGAAGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTGTACATATAAGACCCACCTGTAAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR CCA 72 bp | CCCTGGAATACCTGGGTGGTGTTTGGTCCTAAAACATaGTTCTCTGGGGCTAAATTCAAGCAAGCCCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: PWNTWVVFGPKT*FSGAKFKQALA Trigger: TGCCAGGGCTTGCTTGAATTTAGCCCCAGAGAACCATGTTTTAGGACCAAACACCACCCAGGTATTCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR-3UTR CAA 90 bp | AACTGTGGGCCTCCCAACAGCATCTTCCTCCTCCTTAATCATGTGTGTGACAGCGGTAGACTTGGACACTaGATTCTTTTCTGCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: NCGPPNSIFLLLNHVCDSGRLGH*ILFCLP Trigger: TGGGAGGCAGAAAAGAATCAAGTGTCCAAGTCTACC...GCTGTCACACACATGATTAAGGAGGAGGAAGATGCTGTTGGGAGGCCCACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR TCA 72 bp | GCTCCCCAGCTTTCCTGTGCTCCTATACTTCCCTTATaGGAGGGAAATCTCTGTTTCCTGTGGAGTGATATC | + |
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Preference number: 3 (lower is better) Translates to: APQLSCAPILPL*EGNLCFLWSDI Trigger: GATATCACTCCACAGGAAACAGAGATTTCCCTCTCATAAGGGAAGTATAGGAGCACAGGAAAGCTGGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATGCCTTTCAGAAAGGATaGTCCAAGGTGGCAAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: EGLHSTSSVSLTMYLKIHAFQKG*SKVASR Trigger: CCTACTTGCCACCTTGGACAATCCTTTCTGAAAGGC...ATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCTCCTATACTTCCCTTATGAGAGGGAAATCTCTGTTTCCTGTGGAGTGATAGCCATTGGGGTGTTGTaGCATCCTCTCAAACAGGAT | + |
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Preference number: 3 (lower is better) Translates to: VLLYFPYEREISVSCGVIAIGVL*HPLKQD Trigger: ATCCTGTTTGAGAGGATGCAACAACACCCCAATGGC...TATCACTCCACAGGAAACAGAGATTTCCCTCTCATAAGGGAAGTATAGGAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR TCA 72 bp | TTGATCTCAAGGATAGCTGCTCTGTGCAGCCAGGCCTaGTTGCAGGTTTTTGTCTACCTATGCTCATTGGAT | + |
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Preference number: 3 (lower is better) Translates to: LISRIAALCSQA*LQVFVYLCSLD Trigger: ATCCAATGAGCATAGGTAGACAAAAACCTGCAATCAGGCCTGGCTGCACAGAGCAGCTATCCTTGAGATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR TCA 72 bp | ATAAATAGGGAACTGGCCTTCAATGTAGCCCATCACTaGCCAAGAGCTGCCTGGCACATTGTACACGATAAG | + |
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Preference number: 3 (lower is better) Translates to: INRELAFNVAHH*PRAAWHIVHDK Trigger: CTTATCGTGTACAATGTGCCAGGCAGCTCTTGGTCAGTGATGGGCTACATTGAAGGCCAGTTCCCTATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTGTGCTCCTATACTTCCCTTATGAGAGGGAAATCTCTGTTTCCTGTGGATGGGGTCTGAAATTCTaGATGCTCCAGGGCTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: FPVLLYFPYEREISVSCGWGLKF*MLQGFY Trigger: ATAGAAGCCCTGGAGCATCAAGAATTTCAGACCCCA...TCCACAGGAAACAGAGATTTCCCTCTCATAAGGGAAGTATAGGAGCACAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR TCA 72 bp | TCCCTTATGAGAGGGAAATCTCTGTTTCCTGTGGAGTaGTATCAGGAAGATTTCTTGGGGTCTGAAATTCTT | + |
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Preference number: 3 (lower is better) Translates to: SLMRGKSLFPVE*YQEDFLGSEIL Trigger: AAGAATTTCAGACCCCAAGAAATCTTCCTGATATCACTCCACAGGAAACAGAGATTTCCCTCTCATAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| 3UTR CCA 72 bp | GATGGGAGTGCTGGATCTGATTTGTGGATCTTCAACTaGCCAAGGTTGTCTATAGTCAATTGTGTTTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: DGSAGSDLWIFN*PRLSIVNCVFK Trigger: CTTAAAAACACAATTGACTATAGACAACCTTGGCCAGTTGAAGATCCACAAATCAGATCCAGCACTCCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR CCA 72 bp | ATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATaGGTGACATGTGCTGTTAGAAAGATAAGATGGCAA | + |
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Preference number: 3 (lower is better) Translates to: ILSVSNHVPEDT*VTCAVRKIRWQ Trigger: TTGCCATCTTATCTTTCTAACAGCACATGTCACCCATGTATCTTCAGGTACATGGTTAGAGACACTGAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR CCA 72 bp | TTGTCCAAGGTGGCAAGTAGGAATGAGTTAAGGCTCTaGTTCACCACAGAAATGTTAGTAAAATCAGCAATT | + |
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Preference number: 3 (lower is better) Translates to: LSKVASRNELRL*FTTEMLVKSAI Trigger: AATTGCTGATTTTACTAACATTTCTGTGGTGAACCAGAGCCTTAACTCATTCCTACTTGCCACCTTGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| 3UTR TCA 72 bp | TTTTTAAGTGCCTTAGTGGACACACTTAACTCCATATaGACTCAGCATAGATTTGTGTTCAGCTATCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FLSALVDTLNSI*TQHRFVFSYPQ Trigger: CTGAGGATAGCTGAACACAAATCTATGCTGAGTTCATATGGAGTTAAGTGTGTCCACTAAGGCACTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR GCA 90 bp | GCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCATGGTCGCCAGCCATATaGTCCAGGGGCAGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ASPTQALSTGAATHSWSPWSPAI*SRGRPS Trigger: GGAAGGCCTGCCCCTGGAGCATATGGCTGGCGACCA...TGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR CCA 90 bp | GCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAGTGGGGCCGCAGAGCTaGGTACAGCACTGGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: ASPTQALSTGAATHSWSPVGPQS*VQHWHP Trigger: AGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCAC...TGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR CCA 90 bp | GCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAAGGGGCAGGCCTTCCTaGCTGGGAGTCTTTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ASPTQALSTGAATHSWSPRGRPS*LGVFLC Trigger: ACAGAGAAAGACTCCCAGCCAGGAAGGCCTGCCCCT...TGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR TCA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTAAACGCCGGACGTCACTaGAGCTGGCGTGGCGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: TLCLLGNCKALPSFPVLLNAGRH*SWRGEV Trigger: TACCTCGCCACGCCAGCTTCAGTGACGTCCGGCGTT...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR GCA 90 bp | GGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTATACTTCCCTTATGAGGGCCTATGGTGCCAGTaGCACAGCACACGTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GNCKALPSFPVLLYFPYEGLWCQ*HSTRPA Trigger: TGCTGGACGTGTGCTGTGGCACTGGCACCATAGGCC...CTCATAAGGGAAGTATAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| CDS-3UTR GCA 90 bp | GCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAATAAGCATCTCACAGTaGGGAGTCTGTGGGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: ASPTQALSTGAATHSWSPISISQ*GVCGNR Trigger: CCTGTTCCCACAGACTCCGCACTGTGAGATGCTTAT...TGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR CCA 90 bp | GTCTGTGGGAACAGGTCCACTGCCACAGCCTTGACTGGATGGAATGGGGTGCCTTCCTCCACAGCCTCCTaGCACAGTTCAATTCCCACT | + |
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Preference number: 4 (lower is better) Translates to: VCGNRSTATALTGWNGVPSSTAS*HSSIPT Trigger: AGTGGGAATTGAACTGTGCCAGGAGGCTGTGGAGGA...AGGCACCCCATTCCATCCAGTCAAGGCTGTGGCAGTGGACCTGTTCCCACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| CDS-3UTR TCA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTACCTGCTTCCTCTTTTTaGCATAGTGGGGCCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TLCLLGNCKALPSFPVLLPASSF*HSGAAE Trigger: CTCTGCGGCCCCACTATGTCAAAAAGAGGAAGCAGG...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR GCA 90 bp | ATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGGTGGGTCTTATATGTACAGGGCCAGGCCTATGGTaGCAGTGCCACAGCACACGT | + |
|
Preference number: 4 (lower is better) Translates to: IPGLQCPPCLLQVGLICTGPGLW*QCHSTR Trigger: ACGTGTGCTGTGGCACTGGCACCATAGGCCTGGCCC...TGTACATATAAGACCCACCTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | CAACAGGTGCTGCCACACATTCCTGGTCTCCAGTGCCCTCCCTGTCTCTTACAGAAAGTTGCCCATGGCTaGCCTGGGGTTACAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQVLPHIPGLQCPPCLLQKVAHG*PGVTGN Trigger: GTTTCCTGTAACCCCAGGGCAGCCATGGGCAACTTT...CTGTAAGAGACAGGGAGGGCACTGGAGACCAGGAATGTGTGGCAGCACCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGCTTCTATGCCATTGGGGTGTTGTTGCATCCTCTCAAACAGGATAAGCCAGGGCCAGGCCTATaGTGCCAGTGCCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQGFYAIGVLLHPLKQDKPGPGL*CQCHST Trigger: TGTGCTGTGGCACTGGCACCATAGGCCTGGCCCTGG...CTTATCCTGTTTGAGAGGATGCAACAACACCCCAATGGCATAGAAGCCCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTACGAACAGTCAGTTaGTTCCAGTGGCCTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LCSLTDPGTVNRCCHTFLVRTVS*FQWPVY Trigger: ATATACAGGCCACTGGAAGCAACTGACTGTTCGTAC...CAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGCTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTAAAAGTTGCCCATGGCTaGCCTGGGGTTACAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLGNCKALPSFPVLLKVAHG*PGVTGN Trigger: GTTTCCTGTAACCCCAGGGCAGCCATGGGCAACTTT...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTATCCTCCACAGCCTCCTaGCACAGTTCAATTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLGNCKALPSFPVLLSSTAS*HSSIPT Trigger: AGTGGGAATTGAACTGTGCCAGGAGGCTGTGGAGGA...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000232293.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTATGCCCATGGCTGCCCTaGGGTTACAGGAAACATACA | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLGNCKALPSFPVLLCPWLP*GYRKHT Trigger: TGTATGTTTCCTGTAACCCCAGGGCAGCCATGGGCA...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTATGCCACAGCCTTGACTaGATGGAATGGGGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLGNCKALPSFPVLLCHSLD*MEWGAF Trigger: AAAGGCACCCCATTCCATCCAGTCAAGGCTGTGGCA...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAGCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGTGTTACAAAGGCACATaGTGGCTGTCCAAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCSLTDPGTVNRCCHTFLCYKGT*WLSKEF Trigger: AAACTCTTTGGACAGCCACCATGTGCCTTTGTAACA...CAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGCTGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | TTATATGTACAGTCATGCTGCAAGGGTGGGGAGCCTGTGCTGATGTGCTTCTGTCCACAAAGTTGCCCATaGCTGCCCTGGGGTTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYVQSCCKGGEPVLMCFCPQSCP*LPWGYR Trigger: CCTGTAACCCCAGGGCAGCCATGGGCAACTTTGTGG...ACAGAAGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTGTACATATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTATTGAGTAGAGGGGTATTCAGAGCCCTATTACCTGTTCAGAGGGGCTACCCTGCTTCCTCTTTTTaGCATAGTGGGGCCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVLSRGVFRALLPVQRGYPASSF*HSGAAE Trigger: CTCTGCGGCCCCACTATGTCAAAAAGAGGAAGCAGG...GTAGCCCCTCTGAACAGGTAATAGGGCTCTGAATACCCCTCTACTCAATACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGGCCTCCCAACAGCATCTTCCTCCTCCTTAATCATGTGTGTGACAGCGAACGGATGAATTCCTaGAAGGCCTTCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NCGPPNSIFLLLNHVCDSERMNS*KAFTTC Trigger: GCAGGTGGTGAAGGCCTTCCAGGAATTCATCCGTTC...GCTGTCACACACATGATTAAGGAGGAGGAAGATGCTGTTGGGAGGCCCACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGGCCTCCCAACAGCATCTTCCTCCTCCTTAATCATGTGTGTGACAGCTGCCCATGGCTGCCCTaGGGTTACAGGAAACATACA | + |
|
Preference number: 4 (lower is better) Translates to: NCGPPNSIFLLLNHVCDSCPWLP*GYRKHT Trigger: TGTATGTTTCCTGTAACCCCAGGGCAGCCATGGGCA...GCTGTCACACACATGATTAAGGAGGAGGAAGATGCTGTTGGGAGGCCCACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAAAGGATTGTCCAAGGTGGCAAGTAGGAATGAGTTAAGGCTCTGGTTCGGCCTATGGTGCCAGTaGCACAGCACACGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQKGLSKVASRNELRLWFGLWCQ*HSTRPA Trigger: TGCTGGACGTGTGCTGTGGCACTGGCACCATAGGCC...GAACCAGAGCCTTAACTCATTCCTACTTGCCACCTTGGACAATCCTTTCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTCCATGGGGTCAGCCTTaGGTCGGGCCAGGCGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCPWGQP*VGPGVR Trigger: GCGTACGCCTGGCCCGACCCAAGGCTGACCCCATGG...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACCATGGGGTCAGCCTTaGGTCGGGCCAGGCGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: SNCLFSNLSVPSLGHRCSPWGQP*VGPGVR Trigger: GCGTACGCCTGGCCCGACCCAAGGCTGACCCCATGG...TGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATACAGTGCGGAGTCTGTaGGAACAGGTCCACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGLHSTSSVSLTMYLKIHTVRSL*EQVHCH Trigger: GTGGCAGTGGACCTGTTCCCACAGACTCCGCACTGT...ATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAGCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGATCAGGAAGATTTCTTaGGGTCTGAAATTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LCSLTDPGTVNRCCHTFLIRKIS*GLKFLM Trigger: CATCAAGAATTTCAGACCCCAAGAAATCTTCCTGAT...CAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGCTGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGAATCTCTGTTTCCTGTaGAGTGATATCAGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SAASPTQALSTGAATHSWNLCFL*SDIRKI Trigger: AATCTTCCTGATATCACTCCACAGGAAACAGAGATT...CCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGCTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | ACACACTTAACTCCATATGAACTCAGCATAGATTTGTGTTCAGCTATCCTCAGTTGCCTGGCCCCTCCATaGAGTGGCACACCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THLTPYELSIDLCSAILSCLAPP*SGTPGR Trigger: CCTCCCTGGTGTGCCACTTCATGGAGGGGCCAGGCA...ACTGAGGATAGCTGAACACAAATCTATGCTGAGTTCATATGGAGTTAAGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | GAATCCTTCCTGCCTTTCAGAAAGGATTGTCCAAGGTGGCAAGTAGGAATGAGTACCTGGAAGAATGCATaGGGGGAGATGCGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESFLPFRKDCPRWQVGMSTWKNA*GEMRKV Trigger: GACCTTCCGCATCTCCCCTCATGCATTCTTCCAGGT...ACTCATTCCTACTTGCCACCTTGGACAATCCTTTCTGAAAGGCAGGAAGGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTACTGTTTCCTGTGGAGTaGTATCAGGAAGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLGNCKALPSFPVLLLFPVE*YQEDFL Trigger: CAAGAAATCTTCCTGATATCACTCCACAGGAAACAG...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTATTGAGTAGAGGGGTATTCAGAGCCCTATTACCTGTTCAGAGGGGCTACGTAGAGCACCTCAGCTaGAGGTGTGTTTACCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVLSRGVFRALLPVQRGYVEHLS*RCVYLE Trigger: TTCCAGGTAAACACACCTGCAGCTGAGGTGCTCTAC...GTAGCCCCTCTGAACAGGTAATAGGGCTCTGAATACCCCTCTACTCAATACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | ATTGAAAAAGCATATGGTAATGGTGGTATCTCTGCAGCCTCACCGACCCAGGCAGCTCCAGGGCTTCTATaGCATTGGGGTGTTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IEKAYGNGGISAASPTQAAPGLL*HWGVVA Trigger: TGCAACAACACCCCAATGGCATAGAAGCCCTGGAGC...TGCCTGGGTCGGTGAGGCTGCAGAGATACCACCATTACCATATGCTTTTTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCGTGGGGCCGCAGAGCTaGGTACAGCACTGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQLFILKSVCPIIRTQVFVGPQS*VQHWHP Trigger: AGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCAC...GAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATAACGCCGGACGTCACTaGAGCTGGCGTGGCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHNAGRH*SWRGEV Trigger: TACCTCGCCACGCCAGCTTCAGTGACGTCCGGCGTT...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCTTCAGTCTGCTGGGGTaGTGGCTTGACCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQLFILKSVCPIIRTQVFFSLLG*WLDPLQ Trigger: CTGGAGGGGGTCAAGCCATCACCCCAGCAGACTGAA...GAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGCCTGGCCCCTCCATaGAGTGGCACACCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRCLAPP*SGTPGR Trigger: CCTCCCTGGTGTGCCACTTCATGGAGGGGCCAGGCA...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | GTATTGAGTAGAGGGGTATTCAGAGCCCTATTACCTGTTCAGAGGGGCTACACTTGTCTCAGGGTCATATaGCGAGTATGGTGTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: VLSRGVFRALLPVQRGYTCLRVI*RVWCGT Trigger: CGTTCCACACCATACTCGGCATATGACCCTGAGACA...AGTGTAGCCCCTCTGAACAGGTAATAGGGCTCTGAATACCCCTCTACTCAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTGGTCGCCAGCCATATaGTCCAGGGGCAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCWSPAI*SRGRPS Trigger: GGAAGGCCTGCCCCTGGAGCATATGGCTGGCGACCA...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCGGGCCAGGCCTATGGTaGCAGTGCCACAGCACACGT | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLGPGLW*QCHSTR Trigger: ACGTGTGCTGTGGCACTGGCACCATAGGCCTGGCCC...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000232293.2 |
||
| CDS-3UTR GCA 90 bp | TATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCATGTATGGGAACAGGTCCACTaGCACAGCCTTGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YYLFRGATLYILSVSNHVWEQVH*HSLDWM Trigger: CATCCAGTCAAGGCTGTGGCAGTGGACCTGTTCCCA...TACATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCAGTGGGGCCGCAGAGCTaGGTACAGCACTGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNCLFSNLSVPSLGHRCSVGPQS*VQHWHP Trigger: AGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCAC...TGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTATGGCGAGGTACATTTTaGAGCTCCAGTTTAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLGNCKALPSFPVLLWRGTF*SSSLKI Trigger: AATCTTTAAACTGGAGCTCCAAAATGTACCTCGCCA...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTGCAATGGCCATGGCCTaGCCTCGGCTGCTGGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCAMAMA*PRLLVR Trigger: TCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGC...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCGCAATGGCCATGGCCTaGCCTCGGCTGCTGGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLAMAMA*PRLLVR Trigger: TCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGC...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCGATGGAAGTAGGCAATaGCCATGGCCTGGCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QQLFILKSVCPIIRTQVFDGSRQ*PWPGLG Trigger: GCCGAGGCCAGGCCATGGCCATTGCCTACTTCCATC...GAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| 3UTR CAA 72 bp | TTGATGCTCCAGGGCTTCTATGCCATTGGGGTGTTGTaGCATCCTCTCAAACAGGATAAGCATCTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LMLQGFYAIGVL*HPLKQDKHLTV Trigger: CACTGTGAGATGCTTATCCTGTTTGAGAGGATGCAACAACACCCCAATGGCATAGAAGCCCTGGAGCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
||
| CDS-3UTR TCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCTTCAGTCTGCTGGGGTaGTGGCTTGACCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLFSLLG*WLDPLQ Trigger: CTGGAGGGGGTCAAGCCATCACCCCAGCAGACTGAA...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATTTCAGTCTGCTGGGGTaGTGGCTTGACCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHFSLLG*WLDPLQ Trigger: CTGGAGGGGGTCAAGCCATCACCCCAGCAGACTGAA...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACTGCCTGGCCCCTCCATaGAGTGGCACACCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHCLAPP*SGTPGR Trigger: CCTCCCTGGTGTGCCACTTCATGGAGGGGCCAGGCA...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGGTCGCCAGCCATATaGTCCAGGGGCAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRWSPAI*SRGRPS Trigger: GGAAGGCCTGCCCCTGGAGCATATGGCTGGCGACCA...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGGGGCCAGGCCTATGGTaGCAGTGCCACAGCACACGT | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRGPGLW*QCHSTR Trigger: ACGTGTGCTGTGGCACTGGCACCATAGGCCTGGCCC...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000232293.2 |
||
| CDS-3UTR CCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGGCAATGGCCATGGCCTaGCCTCGGCTGCTGGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRAMAMA*PRLLVR Trigger: TCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGC...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATGATGGAAGTAGGCAATaGCCATGGCCTGGCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHDGSRQ*PWPGLG Trigger: GCCGAGGCCAGGCCATGGCCATTGCCTACTTCCATC...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCGATGGAAGTAGGCAATaGCCATGGCCTGGCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLDGSRQ*PWPGLG Trigger: GCCGAGGCCAGGCCATGGCCATTGCCTACTTCCATC...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CCA 90 bp | CAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCAGGGGCAGGCCTTCCTaGCTGGGAGTCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQLFILKSVCPIIRTQVFRGRPS*LGVFLC Trigger: ACAGAGAAAGACTCCCAGCCAGGAAGGCCTGCCCCT...GAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCCCTGCTTCCTCTTTTTaGCATAGTGGGGCCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQLFILKSVCPIIRTQVFPASSF*HSGAAE Trigger: CTCTGCGGCCCCACTATGTCAAAAAGAGGAAGCAGG...GAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACAAGATTTTACTGCTGGCTTATCAAACATTGGGAAGAAATGAAAAGCAATCTGACCTGCTGGGGTaGTGGCTTGACCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNKILLLAYQTLGRNEKQSDLLG*WLDPLQ Trigger: CTGGAGGGGGTCAAGCCATCACCCCAGCAGGTCAGA...TTGCTTTTCATTTCTTCCCAATGTTTGATAAGCCAGCAGTAAAATCTTGTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000231509.2 |
||
| CDS-3UTR GCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACTGGTCGCCAGCCATATaGTCCAGGGGCAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHWSPAI*SRGRPS Trigger: GGAAGGCCTGCCCCTGGAGCATATGGCTGGCGACCA...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACGGGCCAGGCCTATGGTaGCAGTGCCACAGCACACGT | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHGPGLW*QCHSTR Trigger: ACGTGTGCTGTGGCACTGGCACCATAGGCCTGGCCC...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000232293.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATAGTAGTTTACATACTTTAACGCCAGCACTCAGGAGTCATAAGCCAGATTCACTGAAGCTGGCGTaGCGAGGTACATTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHSSLHTLTPALRSHKPDSLKLA*RGTFWS Trigger: GCTCCAAAATGTACCTCGCCACGCCAGCTTCAGTGA...ATCTGGCTTATGACTCCTGAGTGCTGGCGTTAAAGTATGTAAACTACTATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTAGGGGCAGGCCTTCCTaGCTGGGAGTCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCRGRPS*LGVFLC Trigger: ACAGAGAAAGACTCCCAGCCAGGAAGGCCTGCCCCT...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACCCAGGGCCAGGCCTATaGTGCCAGTGCCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHPGPGL*CQCHST Trigger: TGTGCTGTGGCACTGGCACCATAGGCCTGGCCCTGG...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000232293.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAAACAAATACACAGTAATAGCACTGGGAAAACTGACACCCTTAAAGAACCAGGGCCAGGCCTATaGTGCCAGTGCCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLKQIHSNSTGKTDTLKEPGPGL*CQCHST Trigger: TGTGCTGTGGCACTGGCACCATAGGCCTGGCCCTGG...TTCTTTAAGGGTGTCAGTTTTCCCAGTGCTATTACTGTGTATTTGTTTTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGCCACAAAGTTGCCCATaGCTGCCCTGGGGTTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQQLFILKSVCPIIRTQVPQSCP*LPWGYR Trigger: CCTGTAACCCCAGGGCAGCCATGGGCAACTTTGTGG...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCACAGTGCGGAGTCTGTaGGAACAGGTCCACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLTVRSL*EQVHCH Trigger: GTGGCAGTGGACCTGTTCCCACAGACTCCGCACTGT...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| 3UTR CAA 72 bp | TTCTTGATGCTCCAGGGCTTCTATGCCATTGGGGTGTaGTTGCATCCTCTCAAACAGGATAAGCATCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLMLQGFYAIGV*LHPLKQDKHLT Trigger: TGTGAGATGCTTATCCTGTTTGAGAGGATGCAACAACACCCCAATGGCATAGAAGCCCTGGAGCATCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTACCTGGAAGAATGCATaGGGGGAGATGCGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCTWKNA*GEMRKV Trigger: GACCTTCCGCATCTCCCCTCATGCATTCTTCCAGGT...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCACCTGGAAGAATGCATaGGGGGAGATGCGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLTWKNA*GEMRKV Trigger: GACCTTCCGCATCTCCCCTCATGCATTCTTCCAGGT...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGACCTGGAAGAATGCATaGGGGGAGATGCGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NQQLFILKSVCPIIRTQVTWKNA*GEMRKV Trigger: GACCTTCCGCATCTCCCCTCATGCATTCTTCCAGGT...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACGGCCTATGGTGCCAGTaGCACAGCACACGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHGLWCQ*HSTRPA Trigger: TGCTGGACGTGTGCTGTGGCACTGGCACCATAGGCC...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000232293.2 |
||
| CDS-3UTR GCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCTGGGAACAGGTCCACTaGCACAGCCTTGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLWEQVH*HSLDWM Trigger: CATCCAGTCAAGGCTGTGGCAGTGGACCTGTTCCCA...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR GCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATTGGGAACAGGTCCACTaGCACAGCCTTGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHWEQVH*HSLDWM Trigger: CATCCAGTCAAGGCTGTGGCAGTGGACCTGTTCCCA...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCCGATATTCAGTCTGCTaGGGTGATGGCTTGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLRYSVC*GDGLTP Trigger: GGGGGTCAAGCCATCACCCCAGCAGACTGAATATCG...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CCA 90 bp | AGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACGATATTCAGTCTGCTaGGGTGATGGCTTGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNCLFSNLSVPSLGHRCSRYSVC*GDGLTP Trigger: GGGGGTCAAGCCATCACCCCAGCAGACTGAATATCG...TGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGAGGGGCAGGCCTTCCTaGCTGGGAGTCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRRGRPS*LGVFLC Trigger: ACAGAGAAAGACTCCCAGCCAGGAAGGCCTGCCCCT...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 |
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| CDS-3UTR CCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGCCACAAAGTTGCCCATaGCTGCCCTGGGGTTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRPQSCP*LPWGYR Trigger: CCTGTAACCCCAGGGCAGCCATGGGCAACTTTGTGG...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| 3UTR CAA 72 bp | AGTGATATCAGGAAGATTTCTTGGGGTCTGAAATTCTaGATGCTCCAGGGCTTCTATGCCATTGGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SDIRKISWGLKF*MLQGFYAIGVL Trigger: CAACACCCCAATGGCATAGAAGCCCTGGAGCATCAAGAATTTCAGACCCCAAGAAATCTTCCTGATATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| CDS-3UTR GCA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGAAGGCCTTCACCACCTaGTTAGTGGCCTCTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NQQLFILKSVCPIIRTQVKAFTT*LVASGM Trigger: CATTCCAGAGGCCACTAAGCAGGTGGTGAAGGCCTT...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR GCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTCCAGATCCTCAGCCCTaGCACAGTGGAACTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCPDPQP*HSGTQH Trigger: ATGTTGAGTTCCACTGTGGCAGGGCTGAGGATCTGG...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGGATGGGAAGACAGTCTaGTCACCAAACCTGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NQQLFILKSVCPIIRTQVDGKTV*SPNLAP Trigger: TGGTGCCAGGTTTGGTGAGCAGACTGTCTTCCCATC...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTGCTCCAGGGCTTCTATaGCATTGGGGTGTTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCAPGLL*HWGVVA Trigger: TGCAACAACACCCCAATGGCATAGAAGCCCTGGAGC...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCGCTCCAGGGCTTCTATaGCATTGGGGTGTTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLAPGLL*HWGVVA Trigger: TGCAACAACACCCCAATGGCATAGAAGCCCTGGAGC...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAAAGGATTGTCCAAGGTGGCAAGTAGGAATGAGTTAAGGCTCTGGTTCTGTTCCCAATTTCTTTaGCCAGTTTCTGTAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: FQKGLSKVASRNELRLWFCSQFL*PVSVAP Trigger: GGGTGCTACAGAAACTGGCCAAAGAAATTGGGAACA...GAACCAGAGCCTTAACTCATTCCTACTTGCCACCTTGGACAATCCTTTCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGCGATATTCAGTCTGCTaGGGTGATGGCTTGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRRYSVC*GDGLTP Trigger: GGGGGTCAAGCCATCACCCCAGCAGACTGAATATCG...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATGAACGGATGAATTCCTaGAAGGCCTTCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHERMNS*KAFTTC Trigger: GCAGGTGGTGAAGGCCTTCCAGGAATTCATCCGTTC...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCTGCCCATGGCTGCCCTaGGGTTACAGGAAACATACA | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLCPWLP*GYRKHT Trigger: TGTATGTTTCCTGTAACCCCAGGGCAGCCATGGGCA...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCTGCCACAGCCTTGACTaGATGGAATGGGGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLCHSLD*MEWGAF Trigger: AAAGGCACCCCATTCCATCCAGTCAAGGCTGTGGCA...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACACAGTGCGGAGTCTGTaGGAACAGGTCCACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHTVRSL*EQVHCH Trigger: GTGGCAGTGGACCTGTTCCCACAGACTCCGCACTGT...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| 3UTR CAA 72 bp | TGGTTTCTTTCTTCTGATGGGAGTGCTGGATCTGATTaGTGGATCTTCAACTGGCCAAGGTTGTCTATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WFLSSDGSAGSD*WIFNWPRLSIV Trigger: GACTATAGACAACCTTGGCCAGTTGAAGATCCACAAATCAGATCCAGCACTCCCATCAGAAGAAAGAAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| 3UTR CAA 72 bp | TACCTATGCTCATTGGATAGCCCCTGTAAATGGGTATaGAGTAGAGGGGTATTCAGAGCCCTATTACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLCSLDSPCKWV*SRGVFRALLPV Trigger: AACAGGTAATAGGGCTCTGAATACCCCTCTACTCAATACCCATTTACAGGGGCTATCCAATGAGCATAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTGTAGAGCACCTCAGCTaGAGGTGTGTTTACCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCVEHLS*RCVYLE Trigger: TTCCAGGTAAACACACCTGCAGCTGAGGTGCTCTAC...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGGTAGAGCACCTCAGCTaGAGGTGTGTTTACCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NQQLFILKSVCPIIRTQVVEHLS*RCVYLE Trigger: TTCCAGGTAAACACACCTGCAGCTGAGGTGCTCTAC...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGGATGGGAAGACAGTCTaGTCACCAAACCTGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRDGKTV*SPNLAP Trigger: TGGTGCCAGGTTTGGTGAGCAGACTGTCTTCCCATC...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGAAAGTTGCCCATGGCTaGCCTGGGGTTACAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRKVAHG*PGVTGN Trigger: GTTTCCTGTAACCCCAGGGCAGCCATGGGCAACTTT...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCAATAAGCATCTCACAGTaGGGAGTCTGTGGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNCLFSNLSVPSLGHRCSISISQ*GVCGNR Trigger: CCTGTTCCCACAGACTCCGCACTGTGAGATGCTTAT...TGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AGAACAAGATTTTACTGCTGGCTTATCAAACATTGGGAAGAAATGAAAAGCAAGGGGATTTCTCTGACCTaGTGGGGTGATGGCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: RTRFYCWLIKHWEEMKSKGISLT*WGDGLT Trigger: GGTCAAGCCATCACCCCAGCAGGTCAGAGAAATCCC...CTTGCTTTTCATTTCTTCCCAATGTTTGATAAGCCAGCAGTAAAATCTTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000231509.2 |
||
| CDS-3UTR CCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTCACTGAAGCTGGCGTaGCGAGGTACATTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRSLKLA*RGTFWS Trigger: GCTCCAAAATGTACCTCGCCACGCCAGCTTCAGTGA...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAAGATTTTACTGCTGGCTTATCAAACATTGGGAAGAAATGAAAAGCAAGATTTCTCTGACCTGCTaGGGTGATGGCTTGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTRFYCWLIKHWEEMKSKISLTC*GDGLTP Trigger: GGGGGTCAAGCCATCACCCCAGCAGGTCAGAGAAAT...CTTGCTTTTCATTTCTTCCCAATGTTTGATAAGCCAGCAGTAAAATCTTGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231509.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATAGAACAGCTACAAGTTaGTGGGAAGACAGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHRTATS*WEDSLL Trigger: GAGCAGACTGTCTTCCCATCAACTTGTAGCTGTTCT...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTAGAACAGCTACAAGTTaGTGGGAAGACAGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCRTATS*WEDSLL Trigger: GAGCAGACTGTCTTCCCATCAACTTGTAGCTGTTCT...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACAAGATTTTACTGCTGGCTTATCAAACATTGGGAAGAAATGAAAAGCAAAGAATGGGATTTCTCTaGCCTGCTGGGGTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNKILLLAYQTLGRNEKQRMGFL*PAGVMA Trigger: AGCCATCACCCCAGCAGGTCAGAGAAATCCCATTCT...TTGCTTTTCATTTCTTCCCAATGTTTGATAAGCCAGCAGTAAAATCTTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231509.2 |
||
| CDS-3UTR GCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTCTCAGGGTCATATaGCGAGTATGGTGTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRCLRVI*RVWCGT Trigger: CGTTCCACACCATACTCGGCATATGACCCTGAGACA...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCTGTTCCCAATTTCTTTaGCCAGTTTCTGTAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QQLFILKSVCPIIRTQVFCSQFL*PVSVAP Trigger: GGGTGCTACAGAAACTGGCCAAAGAAATTGGGAACA...GAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCCTGCTTAGTGGCCTCTaGAATGTGCACAGTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLLLSGL*NVHSVK Trigger: TTTGACACTGTGCACATTCCAGAGGCCACTAAGCAG...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACTCCTCCACAGCCTCCTaGCACAGTTCAATTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHSSTAS*HSSIPT Trigger: AGTGGGAATTGAACTGTGCCAGGAGGCTGTGGAGGA...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000232293.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAAACAAATACACAGTAATAGCACTGGGAAAACTGACACCCTTAAAGAATCCTCCACAGCCTCCTaGCACAGTTCAATTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VLKQIHSNSTGKTDTLKESSTAS*HSSIPT Trigger: AGTGGGAATTGAACTGTGCCAGGAGGCTGTGGAGGA...TTCTTTAAGGGTGTCAGTTTTCCCAGTGCTATTACTGTGTATTTGTTTTAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGCTTGACTGGATGGAATaGGGTGCCTTTTACTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NQQLFILKSVCPIIRTQVLDWME*GAFYSV Trigger: AACCGAGTAAAAGGCACCCCATTCCATCCAGTCAAG...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | ACACACTTAACTCCATATGAACTCAGCATAGATTTGTGTTCAGCTATCCTCAGTCTTGACTGGATGGAATaGGGTGCCTTTTACTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: THLTPYELSIDLCSAILSLDWME*GAFYSV Trigger: AACCGAGTAAAAGGCACCCCATTCCATCCAGTCAAG...ACTGAGGATAGCTGAACACAAATCTATGCTGAGTTCATATGGAGTTAAGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | AGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCAGGCAATTTGTGTTACTaGTGGCTCACTATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNCLFSNLSVPSLGHRCSGNLCY*WLTITF Trigger: GAAGGTGATAGTGAGCCATCAGTAACACAAATTGCC...TGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATGGCAATTTGTGTTACTaGTGGCTCACTATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHGNLCY*WLTITF Trigger: GAAGGTGATAGTGAGCCATCAGTAACACAAATTGCC...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCGTACGAACAGTCAGTTaGTTCCAGTGGCCTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLVRTVS*FQWPVY Trigger: ATATACAGGCCACTGGAAGCAACTGACTGTTCGTAC...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCAGTACGAACAGTCAGTTaGTTCCAGTGGCCTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: SNCLFSNLSVPSLGHRCSVRTVS*FQWPVY Trigger: ATATACAGGCCACTGGAAGCAACTGACTGTTCGTAC...TGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACATAAGCATCTCACAGTaGGGAGTCTGTGGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHISISQ*GVCGNR Trigger: CCTGTTCCCACAGACTCCGCACTGTGAGATGCTTAT...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTGTTCCCAATTTCTTTaGCCAGTTTCTGTAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCCSQFL*PVSVAP Trigger: GGGTGCTACAGAAACTGGCCAAAGAAATTGGGAACA...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGCTGTTTCCTGTGGAGTaGTATCAGGAAGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NQQLFILKSVCPIIRTQVLFPVE*YQEDFL Trigger: CAAGAAATCTTCCTGATATCACTCCACAGGAAACAG...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR TCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCCTGTTTCCTGTGGAGTaGTATCAGGAAGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLLFPVE*YQEDFL Trigger: CAAGAAATCTTCCTGATATCACTCCACAGGAAACAG...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCATGTTACAAAGGCACATaGTGGCTGTCCAAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNCLFSNLSVPSLGHRCSCYKGT*WLSKEF Trigger: AAACTCTTTGGACAGCCACCATGTGCCTTTGTAACA...TGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCTGTTACAAAGGCACATaGTGGCTGTCCAAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLCYKGT*WLSKEF Trigger: AAACTCTTTGGACAGCCACCATGTGCCTTTGTAACA...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACCTGCTTAGTGGCCTCTaGAATGTGCACAGTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHLLSGL*NVHSVK Trigger: TTTGACACTGTGCACATTCCAGAGGCCACTAAGCAG...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAAACAAATACACAGTAATAGCACTGGGAAAACTGACACCCTTAAAGAACTGCTTAGTGGCCTCTaGAATGTGCACAGTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLKQIHSNSTGKTDTLKELLSGL*NVHSVK Trigger: TTTGACACTGTGCACATTCCAGAGGCCACTAAGCAG...TTCTTTAAGGGTGTCAGTTTTCCCAGTGCTATTACTGTGTATTTGTTTTAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACCTTGACTGGATGGAATaGGGTGCCTTTTACTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHLDWME*GAFYSV Trigger: AACCGAGTAAAAGGCACCCCATTCCATCCAGTCAAG...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAACAAGATTTTACTGCTGGCTTATCAAACATTGGGAAGAAATGAAAAGCCCCATACACACAGAATaGGATTTCTCTGACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTRFYCWLIKHWEEMKSPIHTE*DFSDLL Trigger: CAGCAGGTCAGAGAAATCCCATTCTGTGTGTATGGG...GCTTTTCATTTCTTCCCAATGTTTGATAAGCCAGCAGTAAAATCTTGTTCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231509.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAAACAAATACACAGTAATAGCACTGGGAAAACTGACACCCTTAAAGAAGGCAATTTGTGTTACTaGTGGCTCACTATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKQIHSNSTGKTDTLKEGNLCY*WLTITF Trigger: GAAGGTGATAGTGAGCCATCAGTAACACAAATTGCC...TTCTTTAAGGGTGTCAGTTTTCCCAGTGCTATTACTGTGTATTTGTTTTAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCTGGCGAGGTACATTTTaGAGCTCCAGTTTAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLWRGTF*SSSLKI Trigger: AATCTTTAAACTGGAGCTCCAAAATGTACCTCGCCA...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACAAGATTTTACTGCTGGCTTATCAAACATTGGGAAGAAATGAAAAGCAATGTTCCCAATTTCTTTaGCCAGTTTCTGTAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QNKILLLAYQTLGRNEKQCSQFL*PVSVAP Trigger: GGGTGCTACAGAAACTGGCCAAAGAAATTGGGAACA...TTGCTTTTCATTTCTTCCCAATGTTTGATAAGCCAGCAGTAAAATCTTGTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231509.2 |
||
| CDS-3UTR TCA 90 bp | CAGAACAAGATTTTACTGCTGGCTTATCAAACATTGGGAAGAAATGAAAAGCAAATAATAAAATTGACATaGACAAGGGCCAGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNKILLLAYQTLGRNEKQIIKLT*TRASLP Trigger: TGGGAGGCTGGCCCTTGTTCATGTCAATTTTATTAT...TTGCTTTTCATTTCTTCCCAATGTTTGATAAGCCAGCAGTAAAATCTTGTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231509.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTCAACAAGCTTTATTGTaGTGTTGTCTCTGTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCQQALL*CCLCKS Trigger: GCTTTTACAGAGACAACAGCACAATAAAGCTTGTTG...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATATCAGGAAGATTTCTTaGGGTCTGAAATTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHIRKIS*GLKFLM Trigger: CATCAAGAATTTCAGACCCCAAGAAATCTTCCTGAT...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATCAGGAAGATTTCTTaGGGTCTGAAATTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLIRKIS*GLKFLM Trigger: CATCAAGAATTTCAGACCCCAAGAAATCTTCCTGAT...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGAATCTCTGTTTCCTGTaGAGTGATATCAGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: NQQLFILKSVCPIIRTQVNLCFL*SDIRKI Trigger: AATCTTCCTGATATCACTCCACAGGAAACAGAGATT...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATAATCTCTGTTTCCTGTaGAGTGATATCAGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFILKSVCPIIRTQVFTHNLCFL*SDIRKI Trigger: AATCTTCCTGATATCACTCCACAGGAAACAGAGATT...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGCAACAAGCTTTATTGTaGTGTTGTCTCTGTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KISNCLFSNLSVPSLGHRQQALL*CCLCKS Trigger: GCTTTTACAGAGACAACAGCACAATAAAGCTTGTTG...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACCAACAAGCTTTATTGTaGTGTTGTCTCTGTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKISNCLFSNLSVPSLGHQQALL*CCLCKS Trigger: GCTTTTACAGAGACAACAGCACAATAAAGCTTGTTG...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACAAGATTTTACTGCTGGCTTATCAAACATTGGGAAGAAATGAAAAGCAACAACAAGCTTTATTGTaGTGTTGTCTCTGTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKILLLAYQTLGRNEKQQQALL*CCLCKS Trigger: GCTTTTACAGAGACAACAGCACAATAAAGCTTGTTG...TTGCTTTTCATTTCTTCCCAATGTTTGATAAGCCAGCAGTAAAATCTTGTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231509.2 |
||
| CDS CCA 90 bp | GCCCAGGCCCTGCTTCCTCTTTTTGACATAGTGGGGCCGCAGAGCTaGGTACAGCACTGGCATCCTGGCCGCAGTCCTCCATGGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AQALLPLFDIVGPQS*VQHWHPGRSPPWAP Trigger: CGGAGCCCATGGAGGACTGCGGCCAGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCACTATGTCAAAAAGAGGAAGCAGGGCCTGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 90 bp | CGGGCCAGGCGTACGCTGAGCGGACAGCCTTTCCAGAGAGCACCGTaGAGCACTCGCAAGGCCTTGTCTCGTTCAGCAGCGCTTCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RARRTLSGQPFQRAP*STRKALSRSAALRN Trigger: ATTCCGAAGCGCTGCTGAACGAGACAAGGCCTTGCGAGTGCTGCACGGTGCTCTCTGGAAAGGCTGTCCGCTCAGCGTACGCCTGGCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 90 bp | CTTCCTCTTTTTGACATAGTGGGGCCGCAGAGCTGGGTACAGCACTaGCATCCTGGCCGCAGTCCTCCATGGGCTCCGGAACCTCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLFDIVGPQSWVQH*HPGRSPPWAPEPPP Trigger: GGGCGGAGGTTCCGGAGCCCATGGAGGACTGCGGCCAGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCACTATGTCAAAAAGAGGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100099.10 |
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| CDS TCA 90 bp | CAAAGTAGAGGGAGGTCACCCCACTGGCCTTGCCTGGCCCCTCCATaGAGTGGCACACCAGGGAGGCCTTTAGTCCTGCCACCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSRGRSPHWPCLAPP*SGTPGRPLVLPPPQ Trigger: CTGAGGAGGTGGCAGGACTAAAGGCCTCCCTGGTGTGCCACTTCATGGAGGGGCCAGGCAAGGCCAGTGGGGTGACCTCCCTCTACTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 90 bp | CATGAGGGGAGATGCGGAAGGTCAGCCCTAGCAGGTCTTCCTGAATaGACTGGTCGCCAGCCATATGCTCCAGGGGCAGGCCTTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HEGRCGRSALAGLPE*TGRQPYAPGAGLPG Trigger: GCCAGGAAGGCCTGCCCCTGGAGCATATGGCTGGCGACCAGTGCATTCAGGAAGACCTGCTAGGGCTGACCTTCCGCATCTCCCCTCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CCA 90 bp | CTTCCTCTTTTTGACATAGTGGGGCCGCAGAGCTGGGTACAGCACTaGCATCCTGGCCGCAGTCCTCCATGGGCTCCGGAACTTCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPLFDIVGPQSWVQH*HPGRSPPWAPELPR Trigger: CCGCGGAAGTTCCGGAGCCCATGGAGGACTGCGGCCAGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCACTATGTCAAAAAGAGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTAGCCATGGGGTCAGCCTaGGGTCGGGCCAGGCGTACG | + |
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Preference number: 5 (lower is better) Translates to: TLCLLGNCKALPSFPVLLAMGSA*GRARRT Trigger: CGTACGCCTGGCCCGACCCAAGGCTGACCCCATGGC...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 90 bp | CTACTCTCTTCACCTTCGGAGCCAGGGCCAGGCCTATGGTGCCAGTaGCACAGCACACGTCCAGCACTGTACTGCCCCCATCTAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSPSEPGPGLWCQ*HSTRPALYCPHLAV Trigger: CACAGCTAGATGGGGGCAGTACAGTGCTGGACGTGTGCTGTGGCACTGGCACCATAGGCCTGGCCCTGGCTCCGAAGGTGAAGAGAGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 ENSMUST00000232293.2 |
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| CDS-3UTR CAA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTAGTCACCCCACTGGCCTaGCCTGGCCCCTCCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLCLLGNCKALPSFPVLLVTPLA*PGPSMK Trigger: CTTCATGGAGGGGCCAGGCAAGGCCAGTGGGGTGAC...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 90 bp | CTGCCACCTCCTCAGAGCTCAGTTTCTGGGGATGGAAGTAGGCAATaGCCATGGCCTGGCCTCGGCTGCTGGTACGAACAGTCAGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LPPPQSSVSGDGSRQ*PWPGLGCWYEQSVA Trigger: AGCAACTGACTGTTCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGCCTACTTCCATCCCCAGAAACTGAGCTCTGAGGAGGTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 90 bp | GAGGCATTGGTGAGGGCGTTCATCCGGGCATCCTCCACAGCCTCCTaGCACAGTTCAATTCCCACTACTCTCTTCACCTTCGGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EALVRAFIRASSTAS*HSSIPTTLFTFGAR Trigger: CCTGGCTCCGAAGGTGAAGAGAGTAGTGGGAATTGAACTGTGCCAGGAGGCTGTGGAGGATGCCCGGATGAACGCCCTCACCAATGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232293.2 |
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| CDS GCA 90 bp | CACCTGCTTAGTGGCCTCTGGAATGTGCACAGTGTCAAAGGGAGCTaGCACAGCACATGTTCCACCCTTGTACTTGCCAAGCCGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLLSGLWNVHSVKGS*HSTCSTLVLAKPAA Trigger: GGCTGCCGGCTTGGCAAGTACAAGGGTGGAACATGTGCTGTGGCAGCTCCCTTTGACACTGTGCACATTCCAGAGGCCACTAAGCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CCA 90 bp | AGCTCATTGGTGAGGGCGTTCATCCGGGCATCCTCCACAGCCTCCTaGCACAGTTCAATTCCCACTACTCTCTTCACCTTCGGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLVRAFIRASSTAS*HSSIPTTLFTFGAR Trigger: CCTGGCTCCGAAGGTGAAGAGAGTAGTGGGAATTGAACTGTGCCAGGAGGCTGTGGAGGATGCCCGGATGAACGCCCTCACCAATGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000145112.9 |
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| CDS CCA 90 bp | AGTCTGTGGGAACAGGTCCACTGCCACAGCCTTGACTGGATGGAATaGGGTGCCTTTTACTCGGTTAGATGGGGCCCTGCAGAGGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: SLWEQVHCHSLDWME*GAFYSVRWGPAEVH Trigger: GTGGACCTCTGCAGGGCCCCATCTAACCGAGTAAAAGGCACCCCATTCCATCCAGTCAAGGCTGTGGCAGTGGACCTGTTCCCACAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | GCCTCACCGACCCAGGCACTGTCAACAGGTGCTGCCACACATTCCTGGTCTCCAAGGGCTTCTATGCCATaGGGGTGTTGTTGCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: ASPTQALSTGAATHSWSPRASMP*GCCCIL Trigger: GAGGATGCAACAACACCCCAATGGCATAGAAGCCCT...TGGAGACCAGGAATGTGTGGCAGCACCTGTTGACAGTGCCTGGGTCGGTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS GCA 90 bp | ACCACATCGGCAATTTGTGTTACTGATGGCTCACTATCACCTTCTTaGCGCCTCTTCCTAGCCATGGGGTCAGCCTTGGGTCGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTSAICVTDGSLSPS*RLFLAMGSALGRAR Trigger: CCTGGCCCGACCCAAGGCTGACCCCATGGCTAGGAAGAGGCGGCAAGAAGGTGATAGTGAGCCATCAGTAACACAAATTGCCGATGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 90 bp | CAGTGTCAAAGGGAGCTGCCACAGCACATGTTCCACCCTTGTACTTaGCAAGCCGGCAGCCAACTGTGTTGTCCTTGCCGTCTACCCCAA | + |
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Preference number: 5 (lower is better) Translates to: QCQRELPQHMFHPCT*QAGSQLCCPCRLPQ Trigger: TTGGGGTAGACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAACATGTGCTGTGGCAGCTCCCTTTGACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS GCA 90 bp | CCTCAGCTGCAGGTGTGTTTACCTGGAAGAATGCATGAGGGGAGATaGGGAAGGTCAGCCCTAGCAGGTCTTCCTGAATGCACTGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PQLQVCLPGRMHEGR*GRSALAGLPECTGR Trigger: GCGACCAGTGCATTCAGGAAGACCTGCTAGGGCTGACCTTCCGCATCTCCCCTCATGCATTCTTCCAGGTAAACACACCTGCAGCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CCA 90 bp | TCTGGGGATGGAAGTAGGCAATGGCCATGGCCTGGCCTCGGCTGCTaGTACGAACAGTCAGTTGCTTCCAGTGGCCTGTATATGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SGDGSRQWPWPGLGC*YEQSVASSGLYMSQ Trigger: CTGAGACATATACAGGCCACTGGAAGCAACTGACTGTTCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGCCTACTTCCATCCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 90 bp | GAATCATTGGTGAGGGCGTTCATCCGGGCATCCTCCACAGCCTCCTaGCACAGTTCAATTCCCACTACTCTCTTCACCTTCGGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESLVRAFIRASSTAS*HSSIPTTLFTFGAR Trigger: CCTGGCTCCGAAGGTGAAGAGAGTAGTGGGAATTGAACTGTGCCAGGAGGCTGTGGAGGATGCCCGGATGAACGCCCTCACCAATGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS TCA 90 bp | GGGCACTGTCCACAGAGGGGTCACCACATCGGCAATTTGTGTTACTaGTGGCTCACTATCACCTTCTTGCCGCCTCTTCCTAGCCATGGG | + |
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Preference number: 5 (lower is better) Translates to: GHCPQRGHHIGNLCY*WLTITFLPPLPSHG Trigger: CCCATGGCTAGGAAGAGGCGGCAAGAAGGTGATAGTGAGCCATCAGTAACACAAATTGCCGATGTGGTGACCCCTCTGTGGACAGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 90 bp | GCAATGGCCATGGCCTGGCCTCGGCTGCTGGTACGAACAGTCAGTTaGTTCCAGTGGCCTGTATATGTCTCAGGGTCATATGCCGAGTAT | + |
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Preference number: 5 (lower is better) Translates to: AMAMAWPRLLVRTVS*FQWPVYVSGSYAEY Trigger: ATACTCGGCATATGACCCTGAGACATATACAGGCCACTGGAAGCAACTGACTGTTCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 90 bp | GTTTCTGGGGATGGAAGTAGGCAATGGCCATGGCCTGGCCTCGGCTaGTGGTACGAACAGTCAGTTGCTTCCAGTGGCCTGTATATGTCT | + |
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Preference number: 5 (lower is better) Translates to: VSGDGSRQWPWPGLG*WYEQSVASSGLYMS Trigger: AGACATATACAGGCCACTGGAAGCAACTGACTGTTCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGCCTACTTCCATCCCCAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 90 bp | AATTCCTGGAAGGCCTTCACCACCTGCTTAGTGGCCTCTGGAATGTaGACAGTGTCAAAGGGAGCTGCCACAGCACATGTTCCACCCTTG | + |
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Preference number: 5 (lower is better) Translates to: NSWKAFTTCLVASGM*TVSKGAATAHVPPL Trigger: CAAGGGTGGAACATGTGCTGTGGCAGCTCCCTTTGACACTGTGCACATTCCAGAGGCCACTAAGCAGGTGGTGAAGGCCTTCCAGGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS GCA 90 bp | CAGGATAAGCATCTCACAGTGCGGAGTCTGTGGGAACAGGTCCACTaGCACAGCCTTGACTGGATGGAATGGGGTGCCTTTTACTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QDKHLTVRSLWEQVH*HSLDWMEWGAFYSV Trigger: AACCGAGTAAAAGGCACCCCATTCCATCCAGTCAAGGCTGTGGCAGTGGACCTGTTCCCACAGACTCCGCACTGTGAGATGCTTATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 90 bp | ACGGATGAATTCCTGGAAGGCCTTCACCACCTGCTTAGTGGCCTCTaGAATGTGCACAGTGTCAAAGGGAGCTGCCACAGCACATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TDEFLEGLHHLLSGL*NVHSVKGSCHSTCS Trigger: GGAACATGTGCTGTGGCAGCTCCCTTTGACACTGTGCACATTCCAGAGGCCACTAAGCAGGTGGTGAAGGCCTTCCAGGAATTCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 90 bp | TCGGATGAATTCCTGGAAGGCCTTCACCACCTGCTTAGTGGCCTCTaGAATGTGCACAGTGTCAAAGGGAGCTGCCACAGCACATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDEFLEGLHHLLSGL*NVHSVKGSCHSTCS Trigger: GGAACATGTGCTGTGGCAGCTCCCTTTGACACTGTGCACATTCCAGAGGCCACTAAGCAGGTGGTGAAGGCCTTCCAGGAATTCATCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145112.9 |
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| CDS-3UTR CAA 90 bp | GAATCCTTCCTGCCTTTCAGAAAGGATTGTCCAAGGTGGCAAGTAGGAATGAGTGTCACCCCACTGGCCTaGCCTGGCCCCTCCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESFLPFRKDCPRWQVGMSVTPLA*PGPSMK Trigger: CTTCATGGAGGGGCCAGGCAAGGCCAGTGGGGTGAC...ACTCATTCCTACTTGCCACCTTGGACAATCCTTTCTGAAAGGCAGGAAGGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | ACCCTCTGCTTACTAGGGAACTGTAAGGCGCTCCCCAGCTTTCCTGTGCTCCTAAGGGCTTCTATGCCATaGGGGTGTTGTTGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLCLLGNCKALPSFPVLLRASMP*GCCCIL Trigger: GAGGATGCAACAACACCCCAATGGCATAGAAGCCCT...TAGGAGCACAGGAAAGCTGGGGAGCGCCTTACAGTTCCCTAGTAAGCAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | TTATATGTACAGTCATGCTGCAAGGGTGGGGAGCCTGTGCTGATGTGCTTCTGTGTTCCACCCTTGTACTaGCCAAGCCGGCAGCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: LYVQSCCKGGEPVLMCFCVPPLY*PSRQPT Trigger: AGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAAC...ACAGAAGCACATCAGCACAGGCTCCCCACCCTTGCAGCATGACTGTACATATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS TCA 90 bp | TTAGAATGTAGGCCAGCCCGTGGTGGGTCTAGAACAGCTACAAGTTaGTGGGAAGACAGTCTGCTCACCAAACCTGGCACCAGATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LECRPARGGSRTATS*WEDSLLTKPGTRSS Trigger: TGAGGATCTGGTGCCAGGTTTGGTGAGCAGACTGTCTTCCCATCAACTTGTAGCTGTTCTAGACCCACCACGGGCTGGCCTACATTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000145112.9 |
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| CDS-3UTR CAA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGGCCATGGGGTCAGCCTaGGGTCGGGCCAGGCGTACG | + |
|
Preference number: 5 (lower is better) Translates to: NQQLFILKSVCPIIRTQVAMGSA*GRARRT Trigger: CGTACGCCTGGCCCGACCCAAGGCTGACCCCATGGC...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATGCCATGGGGTCAGCCTaGGGTCGGGCCAGGCGTACG | + |
|
Preference number: 5 (lower is better) Translates to: LFILKSVCPIIRTQVFTHAMGSA*GRARRT Trigger: CGTACGCCTGGCCCGACCCAAGGCTGACCCCATGGC...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 90 bp | TTCCACCCTTGTACTTGCCAAGCCGGCAGCCAACTGTGTTGTCCTTaGCGTCTACCCCAACTCCGACCAGGAATTCACATTTATTACGAT | + |
|
Preference number: 5 (lower is better) Translates to: FHPCTCQAGSQLCCP*RLPQLRPGIHIYYD Trigger: ATCGTAATAAATGTGAATTCCTGGTCGGAGTTGGGGTAGACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS-3UTR CAA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCGTCACCCCACTGGCCTaGCCTGGCCCCTCCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLVTPLA*PGPSMK Trigger: CTTCATGGAGGGGCCAGGCAAGGCCAGTGGGGTGAC...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS TCA 90 bp | GCTGGCGTGGCGAGGTACATTTTGGAGCTCCAGTTTAAAGATTTCTaGTGTGAACAAGTCATCCCTTATGTAGCTGTAGAGCCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGVARYILELQFKDF*CEQVIPYVAVEPRL Trigger: CAGCCTGGGCTCTACAGCTACATAAGGGATGACTTGTTCACATCAGAAATCTTTAAACTGGAGCTCCAAAATGTACCTCGCCACGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 90 bp | AGAAAACGCCGGACGTCACTGAAGCTGGCGTGGCGAGGTACATTTTaGAGCTCCAGTTTAAAGATTTCTGATGTGAACAAGTCATCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKRRTSLKLAWRGTF*SSSLKISDVNKSSL Trigger: AAGGGATGACTTGTTCACATCAGAAATCTTTAAACTGGAGCTCCAAAATGTACCTCGCCACGCCAGCTTCAGTGACGTCCGGCGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCATGTACCTGAAGATACATATCACCTTAGAATCATaGGTGAGGGCGTTCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGLHSTSSVSLTMYLKIHITLES*VRAFIR Trigger: CCGGATGAACGCCCTCACCAATGATTCTAAGGTGAT...ATGTATCTTCAGGTACATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | TATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCATGTAGCCATTGGGGTGTTGTaGCATCCTCTCAAACAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YYLFRGATLYILSVSNHVAIGVL*HPLKQD Trigger: ATCCTGTTTGAGAGGATGCAACAACACCCCAATGGC...TACATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | TGGGTATTGAGTAGAGGGGTATTCAGAGCCCTATTACCTGTTCAGAGGGGCTACCCAAAGAGTTTGATTTaGTGGGACTGTAGACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WVLSRGVFRALLPVQRGYPKSLI*WDCRPK Trigger: TTTTGGTCTACAGTCCCACAAAATCAAACTCTTTGG...GTAGCCCCTCTGAACAGGTAATAGGGCTCTGAATACCCCTCTACTCAATACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGGTTCCACCCTTGTACTaGCCAAGCCGGCAGCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: KISNCLFSNLSVPSLGHRVPPLY*PSRQPT Trigger: AGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAAC...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | TATTACCTGTTCAGAGGGGCTACACTCTACATCCTCAGTGTCTCTAACCATGTATGGGGTCTGAAATTCTaGATGCTCCAGGGCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: YYLFRGATLYILSVSNHVWGLKF*MLQGFY Trigger: ATAGAAGCCCTGGAGCATCAAGAATTTCAGACCCCA...TACATGGTTAGAGACACTGAGGATGTAGAGTGTAGCCCCTCTGAACAGGTAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | AACTGTGGGCCTCCCAACAGCATCTTCCTCCTCCTTAATCATGTGTGTGACAGCTATCAGGAAGATTTCTaGGGGTCTGAAATTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NCGPPNSIFLLLNHVCDSYQEDF*GSEILD Trigger: ATCAAGAATTTCAGACCCCAAGAAATCTTCCTGATA...GCTGTCACACACATGATTAAGGAGGAGGAAGATGCTGTTGGGAGGCCCACAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCAGGGCTTCTATGCCATaGGGGTGTTGTTGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLRASMP*GCCCIL Trigger: GAGGATGCAACAACACCCCAATGGCATAGAAGCCCT...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATAGTAGTTTACATACTTTAACGCCAGCACTCAGGAGTCATAAGCCAGATGTGGCGAGGTACATTTaGGAGCTCCAGTTTAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RHSSLHTLTPALRSHKPDVARYI*ELQFKD Trigger: ATCTTTAAACTGGAGCTCCAAAATGTACCTCGCCAC...ATCTGGCTTATGACTCCTGAGTGCTGGCGTTAAAGTATGTAAACTACTATGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCGGTACGAACAGTCAGTaGCTTCCAGTGGCCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLGTNSQ*LPVACI Trigger: TATACAGGCCACTGGAAGCAACTGACTGTTCGTACC...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS-3UTR CAA 90 bp | AGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCAGGTACGAACAGTCAGTaGCTTCCAGTGGCCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: SNCLFSNLSVPSLGHRCSGTNSQ*LPVACI Trigger: TATACAGGCCACTGGAAGCAACTGACTGTTCGTACC...TGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATGCCATTGGGGTGTTGTaGCATCCTCTCAAACAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFILKSVCPIIRTQVFTHAIGVL*HPLKQD Trigger: ATCCTGTTTGAGAGGATGCAACAACACCCCAATGGC...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGGGTACGAACAGTCAGTaGCTTCCAGTGGCCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: KISNCLFSNLSVPSLGHRGTNSQ*LPVACI Trigger: TATACAGGCCACTGGAAGCAACTGACTGTTCGTACC...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCTGGGGTCTGAAATTCTaGATGCTCCAGGGCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: NCLFSNLSVPSLGHRCSLWGLKF*MLQGFY Trigger: ATAGAAGCCCTGGAGCATCAAGAATTTCAGACCCCA...GAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGGTGGCGAGGTACATTTaGGAGCTCCAGTTTAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NQQLFILKSVCPIIRTQVVARYI*ELQFKD Trigger: ATCTTTAAACTGGAGCTCCAAAATGTACCTCGCCAC...CACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTGTGGCGAGGTACATTTaGGAGCTCCAGTTTAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ISNCLFSNLSVPSLGHRCVARYI*ELQFKD Trigger: ATCTTTAAACTGGAGCTCCAAAATGTACCTCGCCAC...ACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACGCCATTGGGGTGTTGTaGCATCCTCTCAAACAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKISNCLFSNLSVPSLGHAIGVL*HPLKQD Trigger: ATCCTGTTTGAGAGGATGCAACAACACCCCAATGGC...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGGGGTCTGAAATTCTaGATGCTCCAGGGCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: KISNCLFSNLSVPSLGHRWGLKF*MLQGFY Trigger: ATAGAAGCCCTGGAGCATCAAGAATTTCAGACCCCA...CCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCCCAAAGAGTTTGATTTaGTGGGACTGTAGACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QQLFILKSVCPIIRTQVFPKSLI*WDCRPK Trigger: TTTTGGTCTACAGTCCCACAAAATCAAACTCTTTGG...GAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACAGGTGTTCACTCATTATCAGGAAGATTTCTaGGGGTCTGAAATTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFILKSVCPIIRTQVFTHYQEDF*GSEILD Trigger: ATCAAGAATTTCAGACCCCAAGAAATCTTCCTGATA...ATGAGTGAACACCTGTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAAATCAGCAATTGTTTATTCTCAAATCTGTCTGTCCCATCATTAGGACACTATCAGGAAGATTTCTaGGGGTCTGAAATTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKISNCLFSNLSVPSLGHYQEDF*GSEILD Trigger: ATCAAGAATTTCAGACCCCAAGAAATCTTCCTGATA...GTGTCCTAATGATGGGACAGACAGATTTGAGAATAAACAATTGCTGATTTTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS CCA 72 bp | AGTGGGGCCGCAGAGCTGGGTACAGCACTGGCATCCTaGCCGCAGTCCTCCATGGGCTCCGGAACCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGAAELGTALAS*PQSSMGSGTSA Trigger: GGCGGAGGTTCCGGAGCCCATGGAGGACTGCGGCCAGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100099.10 |
||
| CDS CCA 72 bp | AGTGGGGCCGCAGAGCTGGGTACAGCACTGGCATCCTaGCCGCAGTCCTCCATGGGCTCCGGAACTTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGAAELGTALAS*PQSSMGSGTSA Trigger: CGCGGAAGTTCCGGAGCCCATGGAGGACTGCGGCCAGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS TCA 72 bp | CCATGGGGTCAGCCTTGGGTCGGGCCAGGCGTACGCTaGGCGGACAGCCTTTCCAGAGAGCACCGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWGQPWVGPGVR*ADSLSREHRAA Trigger: TGCTGCACGGTGCTCTCTGGAAAGGCTGTCCGCTCAGCGTACGCCTGGCCCGACCCAAGGCTGACCCCATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS CAA 72 bp | CCTTCTTGCCGCCTCTTCCTAGCCATGGGGTCAGCCTaGGGTCGGGCCAGGCGTACGCTGAGCGGACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSCRLFLAMGSA*GRARRTLSGQP Trigger: AGGCTGTCCGCTCAGCGTACGCCTGGCCCGACCCAAGGCTGACCCCATGGCTAGGAAGAGGCGGCAAGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 72 bp | TCACCTTCGGAGCCAGGGCCAGGCCTATGGTGCCAGTaGCACAGCACACGTCCAGCACTGTACTGCCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPSEPGPGLWCQ*HSTRPALYCPH Trigger: ATGGGGGCAGTACAGTGCTGGACGTGTGCTGTGGCACTGGCACCATAGGCCTGGCCCTGGCTCCGAAGGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 ENSMUST00000232293.2 |
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| CDS TCA 72 bp | GGGGAGATGCGGAAGGTCAGCCCTAGCAGGTCTTCCTaGATGCACTGGTCGCCAGCCATATGCTCCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GEMRKVSPSRSS*MHWSPAICSRG Trigger: GCCCCTGGAGCATATGGCTGGCGACCAGTGCATTCAGGAAGACCTGCTAGGGCTGACCTTCCGCATCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS GCA 72 bp | CGTACGCTGAGCGGACAGCCTTTCCAGAGAGCACCGTaGAGCACTCGCAAGGCCTTGTCTCGTTCAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RTLSGQPFQRAP*STRKALSRSAA Trigger: CGCTGCTGAACGAGACAAGGCCTTGCGAGTGCTGCACGGTGCTCTCTGGAAAGGCTGTCCGCTCAGCGTACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 72 bp | TTTGACATAGTGGGGCCGCAGAGCTGGGTACAGCACTaGCATCCTGGCCGCAGTCCTCCATGGGCTCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FDIVGPQSWVQH*HPGRSPPWAPE Trigger: TTCCGGAGCCCATGGAGGACTGCGGCCAGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCACTATGTCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CAA 90 bp | TCACTATCACCTTCTTGCCGCCTCTTCCTAGCCATGGGGTCAGCCTaGGGTCGGGCCAGGCGTACGCTGAGCGGACAGCCTTTCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLSPSCRLFLAMGSA*GRARRTLSGQPFQR Trigger: TCTCTGGAAAGGCTGTCCGCTCAGCGTACGCCTGGCCCGACCCAAGGCTGACCCCATGGCTAGGAAGAGGCGGCAAGAAGGTGATAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 72 bp | AGATGCGGAAGGTCAGCCCTAGCAGGTCTTCCTGAATaGACTGGTCGCCAGCCATATGCTCCAGGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCGRSALAGLPE*TGRQPYAPGAG Trigger: GCCTGCCCCTGGAGCATATGGCTGGCGACCAGTGCATTCAGGAAGACCTGCTAGGGCTGACCTTCCGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CCA 72 bp | TGGTCGCCAGCCATATGCTCCAGGGGCAGGCCTTCCTaGCTGGGAGTCTTTCTCTGTCCCTCCTCCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WSPAICSRGRPS*LGVFLCPSSTK Trigger: CTTTGTGGAGGAGGGACAGAGAAAGACTCCCAGCCAGGAAGGCCTGCCCCTGGAGCATATGGCTGGCGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000128045.3 ENSMUST00000140206.8 |
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| CDS CCA 72 bp | TGGTCGCCAGCCATATGCTCCAGGGGCAGGCCTTCCTaGCTGGGAGTCTTTCGGATGAATTCCTGGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WSPAICSRGRPS*LGVFRMNSWKA Trigger: GGCCTTCCAGGAATTCATCCGAAAGACTCCCAGCCAGGAAGGCCTGCCCCTGGAGCATATGGCTGGCGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145112.9 |
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| CDS GCA 72 bp | GATGGAAGTAGGCAATGGCCATGGCCTGGCCTCGGCTaGTGGTACGAACAGTCAGTTGCTTCCAGTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DGSRQWPWPGLG*WYEQSVASSGL Trigger: CAGGCCACTGGAAGCAACTGACTGTTCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGCCTACTTCCATC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 72 bp | CTGCTTCCTCTTTTTGACATAGTGGGGCCGCAGAGCTaGGTACAGCACTGGCATCCTGGCCGCAGTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLPLFDIVGPQS*VQHWHPGRSPP Trigger: TGGAGGACTGCGGCCAGGATGCCAGTGCTGTACCCAGCTCTGCGGCCCCACTATGTCAAAAAGAGGAAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 72 bp | CCTCAGAGCTCAGTTTCTGGGGATGGAAGTAGGCAATaGCCATGGCCTGGCCTCGGCTGCTGGTACGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: PQSSVSGDGSRQ*PWPGLGCWYEQ Trigger: CTGTTCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGCCTACTTCCATCCCCAGAAACTGAGCTCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 72 bp | AGGGAGCTGCCACAGCACATGTTCCACCCTTGTACTTaGCAAGCCGGCAGCCAACTGTGTTGTCCTTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RELPQHMFHPCT*QAGSQLCCPCR Trigger: ACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAACATGTGCTGTGGCAGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CAA 72 bp | CCACCCTTGTACTTGCCAAGCCGGCAGCCAACTGTGTaGTCCTTGCCGTCTACCCCAACTCCGACCAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PPLYLPSRQPTV*SLPSTPTPTRN Trigger: ATTCCTGGTCGGAGTTGGGGTAGACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CAA 72 bp | AAGGGAGCTGCCACAGCACATGTTCCACCCTTGTACTaGCCAAGCCGGCAGCCAACTGTGTTGTCCTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KGAATAHVPPLY*PSRQPTVLSLP Trigger: CGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAACATGTGCTGTGGCAGCTCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CAA 90 bp | AGCGGACAGCCTTTCCAGAGAGCACCGTGCAGCACTCGCAAGGCCTaGTCTCGTTCAGCAGCGCTTCGGAATGTTACAAAGGCACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGQPFQRAPCSTRKA*SRSAALRNVTKAHG Trigger: ACCATGTGCCTTTGTAACATTCCGAAGCGCTGCTGAACGAGACAAGGCCTTGCGAGTGCTGCACGGTGCTCTCTGGAAAGGCTGTCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CAA 90 bp | ACAGTGTCAAAGGGAGCTGCCACAGCACATGTTCCACCCTTGTACTaGCCAAGCCGGCAGCCAACTGTGTTGTCCTTGCCGTCTACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVSKGAATAHVPPLY*PSRQPTVLSLPSTP Trigger: TGGGGTAGACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAACATGTGCTGTGGCAGCTCCCTTTGACACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CAA 90 bp | GGCAATGGCCATGGCCTGGCCTCGGCTGCTGGTACGAACAGTCAGTaGCTTCCAGTGGCCTGTATATGTCTCAGGGTCATATGCCGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GNGHGLASAAGTNSQ*LPVACICLRVICRV Trigger: TACTCGGCATATGACCCTGAGACATATACAGGCCACTGGAAGCAACTGACTGTTCGTACCAGCAGCCGAGGCCAGGCCATGGCCATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CAA 90 bp | AAACCTGGCACCAGATCCTCAGCCCTGCCACAGTGGAACTCAACATaGCTCAGCTCATTGGTGAGGGCGTTCATCCGGGCATCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: KPGTRSSALPQWNST*LSSLVRAFIRASST Trigger: TGTGGAGGATGCCCGGATGAACGCCCTCACCAATGAGCTGAGCAATGTTGAGTTCCACTGTGGCAGGGCTGAGGATCTGGTGCCAGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000145112.9 |
||
| CDS TCA 72 bp | TGCCACAGTGGAACTCAACATTGCTCAGCTCATTGGTaGGGGCGTTCATCCGGGCATCCTCCACAGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CHSGTQHCSAHW*GRSSGHPPQPP Trigger: AGGAGGCTGTGGAGGATGCCCGGATGAACGCCCTCACCAATGAGCTGAGCAATGTTGAGTTCCACTGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000145112.9 |
||
| CDS TCA 72 bp | AGGCCAGCCCGTGGTGGGTCTAGAACAGCTACAAGTTaGTGGGAAGACAGTCTGCTCACCAAACCTGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RPARGGSRTATS*WEDSLLTKPGT Trigger: GGTGCCAGGTTTGGTGAGCAGACTGTCTTCCCATCAACTTGTAGCTGTTCTAGACCCACCACGGGCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000145112.9 |
||
| CDS TCA 72 bp | GCCTCAGCTGCAGGTGTGTTTACCTGGAAGAATGCATaGGGGGAGATGCGGAAGGTCAGCCCTAGCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASAAGVFTWKNA*GEMRKVSPSRS Trigger: AGACCTGCTAGGGCTGACCTTCCGCATCTCCCCTCATGCATTCTTCCAGGTAAACACACCTGCAGCTGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128045.3 |
||
| CDS CCA 72 bp | TTCCTGGAAGGCCTTCACCACCTGCTTAGTGGCCTCTaGAATGTGCACAGTGTCAAAGGGAGCTGCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLEGLHHLLSGL*NVHSVKGSCHS Trigger: GCTGTGGCAGCTCCCTTTGACACTGTGCACATTCCAGAGGCCACTAAGCAGGTGGTGAAGGCCTTCCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
||
| CDS CCA 72 bp | GTGAGGGCGTTCATCCGGGCATCCTCCACAGCCTCCTaGCACAGTTCAATTCCCACTACTCTCTTCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRAFIRASSTAS*HSSIPTTLFTF Trigger: GAAGGTGAAGAGAGTAGTGGGAATTGAACTGTGCCAGGAGGCTGTGGAGGATGCCCGGATGAACGCCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 ENSMUST00000232293.2 |
||
| CDS CCA 72 bp | GACTGGATGGAATGGGGTGCCTTTTACTCGGTTAGATaGGGCCCTGCAGAGGTCCACAAAGTTGCCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: DWMEWGAFYSVR*GPAEVHKVAHG Trigger: GCCATGGGCAACTTTGTGGACCTCTGCAGGGCCCCATCTAACCGAGTAAAAGGCACCCCATTCCATCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS CCA 72 bp | GAACAGGTCCACTGCCACAGCCTTGACTGGATGGAATaGGGTGCCTTTTACTCGGTTAGATGGGGCCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: EQVHCHSLDWME*GAFYSVRWGPA Trigger: TGCAGGGCCCCATCTAACCGAGTAAAAGGCACCCCATTCCATCCAGTCAAGGCTGTGGCAGTGGACCTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
||
| CDS CAA 72 bp | GTGTCAAAGGGAGCTGCCACAGCACATGTTCCACCCTaGTACTTGCCAAGCCGGCAGCCAACTGTGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSKGAATAHVPP*YLPSRQPTVLS Trigger: GGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAACATGTGCTGTGGCAGCTCCCTTTGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CAA 90 bp | ATGTGCACAGTGTCAAAGGGAGCTGCCACAGCACATGTTCCACCCTaGTACTTGCCAAGCCGGCAGCCAACTGTGTTGTCCTTGCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: MCTVSKGAATAHVPP*YLPSRQPTVLSLPS Trigger: AGACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAACATGTGCTGTGGCAGCTCCCTTTGACACTGTGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS TCA 72 bp | ACCTCAGCTGCAGGTGTGTTTACCTGGAAGAATGCATaGGGGGAGATGCGGAAGGTCAGCCCTAGCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: TSAAGVFTWKNA*GEMRKVSPSRS Trigger: AGACCTGCTAGGGCTGACCTTCCGCATCTCCCCTCATGCATTCTTCCAGGTAAACACACCTGCAGCTGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS GCA 72 bp | GTCTGCTCACCAAACCTGGCACCAGATCCTCAGCCCTaGCACAGTGGAACTCAACATTGCTCAGCTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: VCSPNLAPDPQP*HSGTQHCSAHW Trigger: CCAATGAGCTGAGCAATGTTGAGTTCCACTGTGGCAGGGCTGAGGATCTGGTGCCAGGTTTGGTGAGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000145112.9 |
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| CDS CAA 72 bp | CCTTTCCAGAGAGCACCGTGCAGCACTCGCAAGGCCTaGTCTCGTTCAGCAGCGCTTCGGAATGTTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: PFQRAPCSTRKA*SRSAALRNVTK Trigger: CTTTGTAACATTCCGAAGCGCTGCTGAACGAGACAAGGCCTTGCGAGTGCTGCACGGTGCTCTCTGGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CAA 72 bp | CATGGCCTGGCCTCGGCTGCTGGTACGAACAGTCAGTaGCTTCCAGTGGCCTGTATATGTCTCAGGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: HGLASAAGTNSQ*LPVACICLRVI Trigger: TATGACCCTGAGACATATACAGGCCACTGGAAGCAACTGACTGTTCGTACCAGCAGCCGAGGCCAGGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 72 bp | AAGGCCTTCACCACCTGCTTAGTGGCCTCTGGAATGTaGACAGTGTCAAAGGGAGCTGCCACAGCACATGTT | + |
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Preference number: 6 (lower is better) Translates to: KAFTTCLVASGM*TVSKGAATAHV Trigger: AACATGTGCTGTGGCAGCTCCCTTTGACACTGTGCACATTCCAGAGGCCACTAAGCAGGTGGTGAAGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS GCA 72 bp | GGTCTAGAACAGCTACAAGTTGATGGGAAGACAGTCTaGTCACCAAACCTGGCACCAGATCCTCAGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLEQLQVDGKTV*SPNLAPDPQPC Trigger: GCAGGGCTGAGGATCTGGTGCCAGGTTTGGTGAGCAGACTGTCTTCCCATCAACTTGTAGCTGTTCTAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000145112.9 |
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| CDS CCA 72 bp | TACAAGTTGATGGGAAGACAGTCTGCTCACCAAACCTaGCACCAGATCCTCAGCCCTGCCACAGTGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: YKLMGRQSAHQT*HQILSPATVEL Trigger: GAGTTCCACTGTGGCAGGGCTGAGGATCTGGTGCCAGGTTTGGTGAGCAGACTGTCTTCCCATCAACTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000145112.9 |
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| CDS CAA 72 bp | TTGTACTTGCCAAGCCGGCAGCCAACTGTGTTGTCCTaGCCGTCTACCCCAACTCCGACCAGGAATTCACAT | + |
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Preference number: 6 (lower is better) Translates to: LYLPSRQPTVLS*PSTPTPTRNSH Trigger: ATGTGAATTCCTGGTCGGAGTTGGGGTAGACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CAA 72 bp | GCTGCCCTGGGGTTACAGGAAACATACAGGAGTCGCTaGATGTTCTCAGCTTTCCGGATGGCCAGAATCACC | + |
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Preference number: 6 (lower is better) Translates to: AALGLQETYRSR*MFSAFRMARIT Trigger: GGTGATTCTGGCCATCCGGAAAGCTGAGAACATCAAGCGACTCCTGTATGTTTCCTGTAACCCCAGGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CAA 90 bp | GCACATGTTCCACCCTTGTACTTGCCAAGCCGGCAGCCAACTGTGTaGTCCTTGCCGTCTACCCCAACTCCGACCAGGAATTCACATTTA | + |
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Preference number: 6 (lower is better) Translates to: AHVPPLYLPSRQPTV*SLPSTPTPTRNSHL Trigger: TAAATGTGAATTCCTGGTCGGAGTTGGGGTAGACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAACATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS TCA 72 bp | CCACAGAGGGGTCACCACATCGGCAATTTGTGTTACTaGTGGCTCACTATCACCTTCTTGCCGCCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PQRGHHIGNLCY*WLTITFLPPLP Trigger: AGGAAGAGGCGGCAAGAAGGTGATAGTGAGCCATCAGTAACACAAATTGCCGATGTGGTGACCCCTCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS TCA 72 bp | CTGCCCTGGGGTTACAGGAAACATACAGGAGTCGCTTaGTGTTCTCAGCTTTCCGGATGGCCAGAATCACCT | + |
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Preference number: 6 (lower is better) Translates to: LPWGYRKHTGVA*CSQLSGWPESP Trigger: AGGTGATTCTGGCCATCCGGAAAGCTGAGAACATCAAGCGACTCCTGTATGTTTCCTGTAACCCCAGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS GCA 72 bp | GCAATTTGTGTTACTGATGGCTCACTATCACCTTCTTaGCGCCTCTTCCTAGCCATGGGGTCAGCCTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: AICVTDGSLSPS*RLFLAMGSALG Trigger: ACCCAAGGCTGACCCCATGGCTAGGAAGAGGCGGCAAGAAGGTGATAGTGAGCCATCAGTAACACAAATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CAA 90 bp | AAAAGCAGCCAGGGTAGCAGGGCACGATTAGTGTTCCCAATTTCTTaGGCCAGTTTCTGTAGCACCCGCTCACATTCCAGTCGCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KSSQGSRARLVFPIS*ASFCSTRSHSSRFC Trigger: GCAGAAGCGACTGGAATGTGAGCGGGTGCTACAGAAACTGGCCAAAGAAATTGGGAACACTAATCGTGCCCTGCTACCCTGGCTGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CAA 90 bp | GTTCCACCCTTGTACTTGCCAAGCCGGCAGCCAACTGTGTTGTCCTaGCCGTCTACCCCAACTCCGACCAGGAATTCACATTTATTACGA | + |
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Preference number: 6 (lower is better) Translates to: VPPLYLPSRQPTVLS*PSTPTPTRNSHLLR Trigger: TCGTAATAAATGTGAATTCCTGGTCGGAGTTGGGGTAGACGGCAAGGACAACACAGTTGGCTGCCGGCTTGGCAAGTACAAGGGTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS GCA 72 bp | TGCCCATTCCTGGATTACTGTGTAGAGCACCTCAGCTaGAGGTGTGTTTACCTGGAAGAATGCATGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: CPFLDYCVEHLS*RCVYLEECMRG Trigger: TCCCCTCATGCATTCTTCCAGGTAAACACACCTGCAGCTGAGGTGCTCTACACAGTAATCCAGGAATGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 ENSMUST00000145112.9 |
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| CDS CAA 90 bp | CGGAATGTTACAAAGGCACATGGTGGCTGTCCAAAGAGTTTGATTTaGTGGGACTGTAGACCAAAACGGCCTAGAAAACGCCGGACGTCA | + |
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Preference number: 6 (lower is better) Translates to: RNVTKAHGGCPKSLI*WDCRPKRPRKRRTS Trigger: TGACGTCCGGCGTTTTCTAGGCCGTTTTGGTCTACAGTCCCACAAAATCAAACTCTTTGGACAGCCACCATGTGCCTTTGTAACATTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS GCA 72 bp | TTGCTTCCAGTGGCCTGTATATGTCTCAGGGTCATATaGCGAGTATGGTGTGGAACGGATGAATTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLPVACICLRVI*RVWCGTDEFLE Trigger: TTCCAGGAATTCATCCGTTCCACACCATACTCGGCATATGACCCTGAGACATATACAGGCCACTGGAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 72 bp | CGGACGTCACTGAAGCTGGCGTGGCGAGGTACATTTTaGAGCTCCAGTTTAAAGATTTCTGATGTGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: RTSLKLAWRGTF*SSSLKISDVNK Trigger: CTTGTTCACATCAGAAATCTTTAAACTGGAGCTCCAAAATGTACCTCGCCACGCCAGCTTCAGTGACGTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CCA 72 bp | TCGTTCAGCAGCGCTTCGGAATGTTACAAAGGCACATaGTGGCTGTCCAAAGAGTTTGATTTTGTGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: SFSSASECYKGT*WLSKEFDFVGL Trigger: CAGTCCCACAAAATCAAACTCTTTGGACAGCCACCATGTGCCTTTGTAACATTCCGAAGCGCTGCTGAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS CAA 72 bp | ACAAAGGCACATGGTGGCTGTCCAAAGAGTTTGATTTaGTGGGACTGTAGACCAAAACGGCCTAGAAAACGC | + |
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Preference number: 6 (lower is better) Translates to: TKAHGGCPKSLI*WDCRPKRPRKR Trigger: GCGTTTTCTAGGCCGTTTTGGTCTACAGTCCCACAAAATCAAACTCTTTGGACAGCCACCATGTGCCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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| CDS TCA 72 bp | ATGTTACAAAGGCACATGGTGGCTGTCCAAAGAGTTTaGTTTTGTGGGACTGTAGACCAAAACGGCCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: MLQRHMVAVQRV*FCGTVDQNGLE Trigger: TTCTAGGCCGTTTTGGTCTACAGTCCCACAAAATCAAACTCTTTGGACAGCCACCATGTGCCTTTGTAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100099.10 ENSMUST00000115640.8 ENSMUST00000140206.8 |
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