Pregenerated sensors for TRMT1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053286Ensembl transcript IDs: ENSMUST00000065625.12, ENSMUST00000189655.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGAACATTGGCGTCCATCCTGGTCACCTGGATATCCCCCAGAGTaGCGTCGTCTTCGAGGGCATCACCCTCTTCCTTTTCCTCGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SEHWRPSWSPGYPPE*RRLRGHHPLPFPRC Trigger: ACAGCGAGGAAAAGGAAGAGGGTGATGCCCTCGAAGACGACGGCACTCTGGGGGATATCCAGGTGACCAGGATGGACGCCAATGTTCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 90 bp | CACAGAGGCCCGAGTTCTATCGCTGTCTTGCCAGGCATGCTCCCATaGCAATTACAGGGCAGCTGTCTGTATGGGTTTTCTTCCACCATG | + |
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Preference number: 1 (lower is better) Translates to: HRGPSSIAVLPGMLP*QLQGSCLYGFSSTM Trigger: CATGGTGGAAGAAAACCCATACAGACAGCTGCCCTGTAATTGTCATGGGAGCATGCCTGGCAAGACAGCGATAGAACTCGGGCCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 90 bp | AACTGCATCAGAGGGGCATCGGTACGGATGCCCATTGGGTCAAAGTaGGTTCGGCTTACTCGAAAGCCTGCTTGCGAAAGACAGCACAAA | + |
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Preference number: 1 (lower is better) Translates to: NCIRGASVRMPIGSK*VRLTRKPACERQHK Trigger: TTTGTGCTGTCTTTCGCAAGCAGGCTTTCGAGTAAGCCGAACTCACTTTGACCCAATGGGCATCCGTACCGATGCCCCTCTGATGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR GCA 90 bp | AACTTGACCACAGAGGCCCGAGTTCTATCGCTGTCTTGCCAGGCATaGTCCCATGACAATTACAGGGCAGCTGTCTGTATGGGTTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: NLTTEARVLSLSCQA*SHDNYRAAVCMGFL Trigger: AAGAAAACCCATACAGACAGCTGCCCTGTAATTGTCATGGGAGCATGCCTGGCAAGACAGCGATAGAACTCGGGCCTCTGTGGTCAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR CCA 90 bp | GATGGATTTAAACTGCATCAGAGGGGCATCGGTACGGATGCCCATTaGGTCAAAGTGAGTTCGGCTTACTCGAAAGCCTGCTTGCGAAAG | + |
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Preference number: 1 (lower is better) Translates to: DGFKLHQRGIGTDAH*VKVSSAYSKACLRK Trigger: CTTTCGCAAGCAGGCTTTCGAGTAAGCCGAACTCACTTTGACCCAATGGGCATCCGTACCGATGCCCCTCTGATGCAGTTTAAATCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR GCA 90 bp | GACGTTCCAAAGGGATCCAGATGTATAAAGTCAAAAGATCTGAGGTaGATCAGAACATTGGCGTCCATCCTGGTCACCTGGATATCCCCC | + |
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Preference number: 1 (lower is better) Translates to: DVPKGSRCIKSKDLR*IRTLASILVTWISP Trigger: GGGGGATATCCAGGTGACCAGGATGGACGCCAATGTTCTGATGCACCTCAGATCTTTTGACTTTATACATCTGGATCCCTTTGGAACGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 90 bp | ATGCTGTGCCTTGGCATACAAGGAGCTGATGTCTGTAGAAGTCACTaGCACTATGCCAAGGTTCCTTACATTTCTGAACGCAGAGTCGAG | + |
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Preference number: 1 (lower is better) Translates to: MLCLGIQGADVCRSH*HYAKVPYISERRVE Trigger: CTCGACTCTGCGTTCAGAAATGTAAGGAACCTTGGCATAGTGTCAGTGACTTCTACAGACATCAGCTCCTTGTATGCCAAGGCACAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR CAA 90 bp | GAACCCCCTCACAGTCACCATCTCCTGCAGCCACTCGCTTCCGCTTaGTCACTCACGGACATCTCAACCCTGTCGGTGACCGTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: EPPHSHHLLQPLASA*SLTDISTLSVTVSS Trigger: TGAGGACACGGTCACCGACAGGGTTGAGATGTCCGTGAGTGACAAAGCGGAAGCGAGTGGCTGCAGGAGATGGTGACTGTGAGGGGGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGCCACTCGCTTCCGCTTTGTCACTCACGGACATCTCAACCCTGTCGGTGGGGCAGCTGTCTGTATaGGTTTTCTTCCACCATGTT | + |
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Preference number: 2 (lower is better) Translates to: LQPLASALSLTDISTLSVGQLSV*VFFHHV Trigger: AACATGGTGGAAGAAAACCCATACAGACAGCTGCCC...CACCGACAGGGTTGAGATGTCCGTGAGTGACAAAGCGGAAGCGAGTGGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGGATTTTCTTGGCAGTCTCGTCCGCTGAAGTAGGGCCTCTTAAGACCCTCCATTGGCGTCCATCCTaGTCACCTGGATATCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: YWIFLAVSSAEVGPLKTLHWRPS*SPGYPP Trigger: TGGGGGATATCCAGGTGACCAGGATGGACGCCAATG...GAGGGTCTTAAGAGGCCCTACTTCAGCGGACGAGACTGCCAAGAAAATCCAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR CAA 90 bp | ATCCTCTCTTCACACCACTGGCAGTGGATCAGGTACTGGATTTTCTaGGCAGTCTCGTCCGCTGAAGTAGGGCCTCTTAAGACCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: ILSSHHWQWIRYWIF*AVSSAEVGPLKTLT Trigger: TGTGAGGGTCTTAAGAGGCCCTACTTCAGCGGACGAGACTGCCAAGAAAATCCAGTACCTGATCCACTGCCAGTGGTGTGAAGAGAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR CAA 90 bp | GGATCCAGATGTATAAAGTCAAAAGATCTGAGGTGCATCAGAACATaGGCGTCCATCCTGGTCACCTGGATATCCCCCAGAGTGCCGTCG | + |
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Preference number: 2 (lower is better) Translates to: GSRCIKSKDLRCIRT*ASILVTWISPRVPS Trigger: CGACGGCACTCTGGGGGATATCCAGGTGACCAGGATGGACGCCAATGTTCTGATGCACCTCAGATCTTTTGACTTTATACATCTGGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR GCA 90 bp | TACTTTAGCAAGATGGATTTAAACTGCATCAGAGGGGCATCGGTACGGATGCCCCCGGGCAACATGCTGTaGCTTGGCATACAAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: YFSKMDLNCIRGASVRMPPGNML*LGIQGA Trigger: AGCTCCTTGTATGCCAAGGCACAGCATGTTGCCCGG...GGGCATCCGTACCGATGCCCCTCTGATGCAGTTTAAATCCATCTTGCTAAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCCACTCGCTTCCGCTTTGTCACTCACGGACATCTCAACCCTGTCGGTGTCATCCAAACCATGGTaGATAGATTCAAATAGCATC | + |
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Preference number: 2 (lower is better) Translates to: LQPLASALSLTDISTLSVSSKPW*IDSNSI Trigger: GATGCTATTTGAATCTATTCACCATGGTTTGGATGA...CACCGACAGGGTTGAGATGTCCGTGAGTGACAAAGCGGAAGCGAGTGGCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCACTGCAGCTACGACAATTCTGGCCGCCAGCTCCTTGTAATACTCTGTTCGTCAAAAGATCTGAGGTaGATCAGAACATTGGCGTCC | + |
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Preference number: 2 (lower is better) Translates to: CHCSYDNSGRQLLVILCSSKDLR*IRTLAS Trigger: GGACGCCAATGTTCTGATGCACCTCAGATCTTTTGA...CGAACAGAGTATTACAAGGAGCTGGCGGCCAGAATTGTCGTAGCTGCAGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGCTGTACTTTAGCAAGATGGATTTAAACTGCATCAGAGGGGCATCGGTAGCATGTTCATCCCTTTaGTGCTGTGCCTGTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: GVLYFSKMDLNCIRGASVACSSL*CCACGC Trigger: ACATCCACAGGCACAGCATCAAAGGGATGAACATGC...TACCGATGCCCCTCTGATGCAGTTTAAATCCATCTTGCTAAAGTACAGCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR TCA 90 bp | AATCCTCTCTTCACACCACTGGCAGTGGATCAGGTACTGGATTTTCTTGGCAGTGTCTGTAGAAGTCACTaGCACTATGCCAAGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: NPLFTPLAVDQVLDFLGSVCRSH*HYAKVP Trigger: AGGAACCTTGGCATAGTGTCAGTGACTTCTACAGAC...ACTGCCAAGAAAATCCAGTACCTGATCCACTGCCAGTGGTGTGAAGAGAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR GCA 90 bp | TACTTTAGCAAGATGGATTTAAACTGCATCAGAGGGGCATCGGTACGGATGCCCACTCGAAAGCCTGCTTaGGAAAGACAGCACAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: YFSKMDLNCIRGASVRMPTRKPA*ERQHKN Trigger: ATTTTTGTGCTGTCTTTCGCAAGCAGGCTTTCGAGT...GGGCATCCGTACCGATGCCCCTCTGATGCAGTTTAAATCCATCTTGCTAAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTCTTGCCCTGTGCACTGTAAATATCTATTGTGGTATCATCGGTGGTTTTCTGTCTTGCCAGGCATaGTCCCATGACAATTACAGG | + |
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Preference number: 2 (lower is better) Translates to: FSLALCTVNIYCGIIGGFLSCQA*SHDNYR Trigger: CCTGTAATTGTCATGGGAGCATGCCTGGCAAGACAG...AAAACCACCGATGATACCACAATAGATATTTACAGTGCACAGGGCAAGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTCTTGCCCTGTGCACTGTAAATATCTATTGTGGTATCATCGGTGGTTTTCTTCTATACCTTTGTTaGACCGTGCTGCAGCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: FSLALCTVNIYCGIIGGFLLYLC*TVLQLL Trigger: CAAGAGCTGCAGCACGGTGCAACAAAGGTATAGAAG...AAAACCACCGATGATACCACAATAGATATTTACAGTGCACAGGGCAAGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGATTGTGCTCCAGTGTAAGTGGGGGTGCTGTACTTTAGCAAGATGGATTACGCCATTTTCTTCTTaGTTGTTGGTATTTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LLIVLQCKWGCCTLARWITPFSS*LLVFEG Trigger: ACCTTCAAATACCAACAAGCAAGAAGAAAATGGCGT...AATCCATCTTGCTAAAGTACAGCACCCCCACTTACACTGGAGCACAATCAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 72 bp | CCGCTTTGTCACTCACGGACATCTCAACCCTGTCGGTaGCCGTGTCCTCAGCTGCTGGCGGCATCTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PLCHSRTSQPCR*PCPQLLAASGL Trigger: AAGGCCAGATGCCGCCAGCAGCTGAGGACACGGTCACCGACAGGGTTGAGATGTCCGTGAGTGACAAAGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 72 bp | GACCGTGTCCTCAGCTGCTGGCGGCATCTGGCCTTCTaGTTGTGCTCCAGTGTAAGTGGGGGTGCTGTACTT | + |
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Preference number: 3 (lower is better) Translates to: DRVLSCWRHLAF*LCSSVSGGAVL Trigger: AAGTACAGCACCCCCACTTACACTGGAGCACAATCAGAAGGCCAGATGCCGCCAGCAGCTGAGGACACGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR GCA 72 bp | AACCCTGAGAAGAACCCCCTCACAGTCACCATCTCCTaGAGCCACTCGCTTCCGCTTTGTCACTCACGGACA | + |
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Preference number: 3 (lower is better) Translates to: NPEKNPLTVTIS*SHSLPLCHSRT Trigger: TGTCCGTGAGTGACAAAGCGGAAGCGAGTGGCTGCAGGAGATGGTGACTGTGAGGGGGTTCTTCTCAGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 72 bp | CAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTaGGAAGAACCCCCTCACAGTCACCATCTCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QRYRDLGHHTEP*EEPPHSHHLLQ Trigger: CTGCAGGAGATGGTGACTGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 72 bp | AGAGGGGCATCGGTACGGATGCCCATTGGGTCAAAGTaGGTTCGGCTTACTCGAAAGCCTGCTTGCGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: RGASVRMPIGSK*VRLTRKPACER Trigger: TCTTTCGCAAGCAGGCTTTCGAGTAAGCCGAACTCACTTTGACCCAATGGGCATCCGTACCGATGCCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR GCA 72 bp | ACAGAGGCCCGAGTTCTATCGCTGTCTTGCCAGGCATaGTCCCATGACAATTACAGGGCAGCTGTCTGTATG | + |
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Preference number: 3 (lower is better) Translates to: TEARVLSLSCQA*SHDNYRAAVCM Trigger: CATACAGACAGCTGCCCTGTAATTGTCATGGGAGCATGCCTGGCAAGACAGCGATAGAACTCGGGCCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR GCA 72 bp | AACTTGACCACAGAGGCCCGAGTTCTATCGCTGTCTTaGCAGGCATGCTCCCATGACAATTACAGGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: NLTTEARVLSLS*QACSHDNYRAA Trigger: AGCTGCCCTGTAATTGTCATGGGAGCATGCCTGGCAAGACAGCGATAGAACTCGGGCCTCTGTGGTCAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR CCA 72 bp | AAACTGCATCAGAGGGGCATCGGTACGGATGCCCATTaGGTCAAAGTGAGTTCGGCTTACTCGAAAGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: KLHQRGIGTDAH*VKVSSAYSKAC Trigger: GCAGGCTTTCGAGTAAGCCGAACTCACTTTGACCCAATGGGCATCCGTACCGATGCCCCTCTGATGCAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR CCA 72 bp | ATCCTCTCTTCACACCACTGGCAGTGGATCAGGTACTaGATTTTCTTGGCAGTCTCGTCCGCTGAAGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: ILSSHHWQWIRY*IFLAVSSAEVG Trigger: CCCTACTTCAGCGGACGAGACTGCCAAGAAAATCCAGTACCTGATCCACTGCCAGTGGTGTGAAGAGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR CAA 90 bp | AATCCTCTCTTCACACCACTGGCAGTGGATCAGGTACTGGATTTTCTTGGCAGTACCGTGCTGCAGCTCTaGCCACTGCAGCTACGACAA | + |
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Preference number: 3 (lower is better) Translates to: NPLFTPLAVDQVLDFLGSTVLQL*PLQLRQ Trigger: TTGTCGTAGCTGCAGTGGCAAGAGCTGCAGCACGGT...ACTGCCAAGAAAATCCAGTACCTGATCCACTGCCAGTGGTGTGAAGAGAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGTGCTGTACTTTAGCAAGATGGATTTAAACTGCATCAGAGGGGCATCGGTAAGGTGCATCAGAACATaGGCGTCCATCCTGGTCACC | + |
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Preference number: 3 (lower is better) Translates to: GVLYFSKMDLNCIRGASVRCIRT*ASILVT Trigger: GGTGACCAGGATGGACGCCAATGTTCTGATGCACCT...TACCGATGCCCCTCTGATGCAGTTTAAATCCATCTTGCTAAAGTACAGCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 72 bp | CCGAGTTCTATCGCTGTCTTGCCAGGCATGCTCCCATaGCAATTACAGGGCAGCTGTCTGTATGGGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PSSIAVLPGMLP*QLQGSCLYGFS Trigger: AGAAAACCCATACAGACAGCTGCCCTGTAATTGTCATGGGAGCATGCCTGGCAAGACAGCGATAGAACTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGTGCTGTACTTTAGCAAGATGGATTTAAACTGCATCAGAGGGGCATCGGTAGCAACATGCTGTGCCTaGGCATACAAGGAGCTGATG | + |
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Preference number: 3 (lower is better) Translates to: GVLYFSKMDLNCIRGASVATCCA*AYKELM Trigger: CATCAGCTCCTTGTATGCCAAGGCACAGCATGTTGC...TACCGATGCCCCTCTGATGCAGTTTAAATCCATCTTGCTAAAGTACAGCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR GCA 72 bp | AATGTTACATCCGTAGTGACGCCGGGCAACATGCTGTaGCTTGGCATACAAGGAGCTGATGTCTGTAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: NVTSVVTPGNML*LGIQGADVCRS Trigger: ACTTCTACAGACATCAGCTCCTTGTATGCCAAGGCACAGCATGTTGCCCGGCGTCACTACGGATGTAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR TCA 72 bp | CATCCTTTTGAGGAATCCAGTATTGAAAAGGGAACTTaGCCACAGAGGCCCGAGTTCTATCGCTGTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: HPFEESSIEKGT*PQRPEFYRCLA Trigger: GGCAAGACAGCGATAGAACTCGGGCCTCTGTGGTCAAGTTCCCTTTTCAATACTGGATTCCTCAAAAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR GCA 72 bp | AAGGGATCCAGATGTATAAAGTCAAAAGATCTGAGGTaGATCAGAACATTGGCGTCCATCCTGGTCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: KGSRCIKSKDLR*IRTLASILVTW Trigger: CCAGGTGACCAGGATGGACGCCAATGTTCTGATGCACCTCAGATCTTTTGACTTTATACATCTGGATCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| 3UTR-3UTR CAA 90 bp | ATATCTATTGTGGTATCATCGGTGGTTTTAACAAATACGCCATTTTCTTCTTGCACTTCTATACCTTTGTaGCACCGTGCTGCAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: ISIVVSSVVLTNTPFSSCTSIPL*HRAAAL Trigger: AAGAGCTGCAGCACGGTGCAACAAAGGTATAGAAGT...GCAAGAAGAAAATGGCGTATTTGTTAAAACCACCGATGATACCACAATAGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| CDS-3UTR CCA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCAGGCCGGGGCAAGGGCTaGGGCTGGATCCGAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSGRGKG*GWIRVR Trigger: CCGGACTCGGATCCAGCCCCAGCCCTTGCCCCGGCC...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR TCA 90 bp | AGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACACCCGGGTCGGGACCCTaGCCTGGGCCTCCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SGTETWAIIQNPEKNPLTPGSGP*PGPPPS Trigger: AGAAGGAGGAGGCCCAGGTCAGGGTCCCGACCCGGG...TGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| 3UTR CAA 72 bp | CACAGTCACCATCTCCTGCAGCCACTCGCTTCCGCTTaGTCACTCACGGACATCTCAACCCTGTCGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: HSHHLLQPLASA*SLTDISTLSVT Trigger: GGTCACCGACAGGGTTGAGATGTCCGTGAGTGACAAAGCGGAAGCGAGTGGCTGCAGGAGATGGTGACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| CDS-3UTR TCA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACCAGGCATGCTCCCATaGCAATTACAGGGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSPGMLP*QLQGSC Trigger: ACAGCTGCCCTGTAATTGTCATGGGAGCATGCCTGG...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR GCA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCATGCAGCTCTTGCCACTaGAGCTACGACAATTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSCSSCH*SYDNSG Trigger: GCCAGAATTGTCGTAGCTGCAGTGGCAAGAGCTGCA...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR GCA 90 bp | AGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACAGGGCATCGGTACGGATaGCCATTGGGTCAAAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SGTETWAIIQNPEKNPLTGHRYG*PLGQSE Trigger: CTCACTTTGACCCAATGGGCATCCGTACCGATGCCC...TGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR GCA 90 bp | AAAAAGGATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGGACCGTGTCCTCAGCTaGTGGCGGCATCTGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KKDCSGTETWAIIQNPEKDRVLS*WRHLAF Trigger: GAAGGCCAGATGCCGCCAGCAGCTGAGGACACGGTC...CTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATCCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR CCA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACTCTCTTCACACCACTaGCAGTGGATCAGGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSLSSHH*QWIRYW Trigger: CCAGTACCTGATCCACTGCCAGTGGTGTGAAGAGAG...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR TCA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCAGCATGTTCATCCCTTTaGTGCTGTGCCTGTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSACSSL*CCACGC Trigger: ACATCCACAGGCACAGCATCAAAGGGATGAACATGC...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR TCA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCGGCATCTGGCCTTCTaGTTGTGCTCCAGTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DCSGTETWAIIQNPEKNPRHLAF*LCSSVS Trigger: ACTTACACTGGAGCACAATCAGAAGGCCAGATGCCG...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CCA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCAGTGCTCCAGTGTAAGTaGGGGTGCTGTACTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSVLQCK*GCCTLA Trigger: TGCTAAAGTACAGCACCCCCACTTACACTGGAGCAC...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| 3UTR CAA 72 bp | TCACACCACTGGCAGTGGATCAGGTACTGGATTTTCTaGGCAGTCTCGTCCGCTGAAGTAGGGCCTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHHWQWIRYWIF*AVSSAEVGPLK Trigger: CTTAAGAGGCCCTACTTCAGCGGACGAGACTGCCAAGAAAATCCAGTACCTGATCCACTGCCAGTGGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
||
| CDS-3UTR TCA 90 bp | AACCCCCTCACAGTCACCATCTCCTGCAGCCACTCGCTTCCGCTTTGTCACTCATTGTTGCTGAACAAATaGTGCAGTGATAATGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NPLTVTISCSHSLPLCHSLLLNK*CSDNGR Trigger: GCGCCCATTATCACTGCATCATTTGTTCAGCAACAA...TGAGTGACAAAGCGGAAGCGAGTGGCTGCAGGAGATGGTGACTGTGAGGGGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
||
| CDS-3UTR TCA 90 bp | AGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACACCCATTGGGTCAAAGTaGGTTCGGCTTACTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGTETWAIIQNPEKNPLTPIGSK*VRLTRK Trigger: CTTTCGAGTAAGCCGAACTCACTTTGACCCAATGGG...TGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACTTCTATACCTTTGTTaGACCGTGCTGCAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSLLYLC*TVLQLL Trigger: CAAGAGCTGCAGCACGGTGCAACAAAGGTATAGAAG...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTGTCTTGCCAGGCATaGTCCCATGACAATTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DCSGTETWAIIQNPEKNPLSCQA*SHDNYR Trigger: CCTGTAATTGTCATGGGAGCATGCCTGGCAAGACAG...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTGAATGAAGTCGGGACCCTGACCTaGGCCTCCTCCTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSNALTPAKSETANFLNEVGTLT*ASSFSW Trigger: CCAGGAGAAGGAGGAGGCCCAGGTCAGGGTCCCGAC...TTCATTCAGAAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGGCTGCTGGCGGCATCTaGCCTTCTGATTGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKDCSGTETWAIIQNPEKAAGGI*PSDCAP Trigger: TGGAGCACAATCAGAAGGCCAGATGCCGCCAGCAGC...CTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR TCA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCAAACAGGGAAGAAGATaGATCAGTGGCTCCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DCSGTETWAIIQNPEKNPKQGRR*ISGSKG Trigger: GCCTTTGGAGCCACTGATTCATCTTCTTCCCTGTTT...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
||
| CDS-3UTR GCA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCACTGCATTTCCAAGGTaGTTTGCCCACTGTAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: DCSGTETWAIIQNPEKNPTAFPR*FAHCNP Trigger: GGGATTACAGTGGGCAAAGCACCTTGGAAATGCAGT...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCATCAAAAGATCTGAGGTaGATCAGAACATTGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSSKDLR*IRTLAS Trigger: GGACGCCAATGTTCTGATGCACCTCAGATCTTTTGA...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCGCTTACTCGAAAGCCTaGTTGCGAAAGACAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: DCSGTETWAIIQNPEKNPAYSKA*LRKTAQ Trigger: TTGTGCTGTCTTTCGCAAGCAGGCTTTCGAGTAAGC...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGCATTGGCGTCCATCCTaGTCACCTGGATATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKDCSGTETWAIIQNPEKHWRPS*SPGYPP Trigger: TGGGGGATATCCAGGTGACCAGGATGGACGCCAATG...CTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATCCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CCA 90 bp | AGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACAGTTGAACACTGGCTTTaGGGGGTACACTCTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGTETWAIIQNPEKNPLTVEHWL*GVHSDS Trigger: TGAATCAGAGTGTACCCCCCAAAGCCAGTGTTCAAC...TGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR TCA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCTTGTTGCTGAACAAATaGTGCAGTGATAATGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DCSGTETWAIIQNPEKNPLLLNK*CSDNGR Trigger: GCGCCCATTATCACTGCATCATTTGTTCAGCAACAA...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
||
| CDS-3UTR TCA 90 bp | AGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACAGTCTTTATTAGGGGTTaGATGTCATCCAAACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTETWAIIQNPEKNPLTVFIRG*MSSKPW Trigger: CCATGGTTTGGATGACATTCAACCCCTAATAAAGAC...TGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGGTCTGTAGAAGTCACTaGCACTATGCCAAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKDCSGTETWAIIQNPEKVCRSH*HYAKVP Trigger: AGGAACCTTGGCATAGTGTCAGTGACTTCTACAGAC...CTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATCCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR TCA 90 bp | AAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTTCTCAACCCTGTCGGTaGCCGTGTCCTCAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNLKSNALTPAKSETANFSQPCR*PCPQLL Trigger: CAGCAGCTGAGGACACGGTCACCGACAGGGTTGAGA...AAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGACTGCATTTCCAAGGTaGTTTGCCCACTGTAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKDCSGTETWAIIQNPEKTAFPR*FAHCNP Trigger: GGGATTACAGTGGGCAAAGCACCTTGGAAATGCAGT...CTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATCCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
||
| CDS-3UTR TCA 90 bp | AGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACATCATCCAAACCATGGTaGATAGATTCAAATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SGTETWAIIQNPEKNPLTSSKPW*IDSNSI Trigger: GATGCTATTTGAATCTATTCACCATGGTTTGGATGA...TGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTGAATGAAGTTCTATCGCTGTCTTaGCAGGCATGCTCCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSNALTPAKSETANFLNEVLSLS*QACSHD Trigger: GTCATGGGAGCATGCCTGGCAAGACAGCGATAGAAC...TTCATTCAGAAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AATAAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATCCGGGCAACATGCTGTaGCTTGGCATACAAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKNLKSNALTPAKSETANPGNML*LGIQGA Trigger: AGCTCCTTGTATGCCAAGGCACAGCATGTTGCCCGG...ATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCCGTGCTGCAGCTCTTaGCACTGCAGCTACGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KNLKSNALTPAKSETANFPCCSS*HCSYDN Trigger: ATTGTCGTAGCTGCAGTGGCAAGAGCTGCAGCACGG...AAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR TCA 90 bp | AATAAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATCACAGCGGGCAAGTTTaGCTGTTTTCTGTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKNLKSNALTPAKSETANHSGQV*LFSVPG Trigger: TCCAGGCACAGAAAACAGTCAAACTTGCCCGCTGTG...ATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTGAATGAACAGTGTAAGTGGGGGTaGTGTACTTTAGCAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KSNALTPAKSETANFLNEQCKWG*CTLARW Trigger: CCATCTTGCTAAAGTACAGCACCCCCACTTACACTG...TTCATTCAGAAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR CCA 90 bp | AAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTGGTACGGATGCCCATTaGGTCAAAGTGAGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNLKSNALTPAKSETANFGTDAH*VKVSSA Trigger: AGCCGAACTCACTTTGACCCAATGGGCATCCGTACC...AAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR TCA 90 bp | AAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTGAATGAATTCCAGTGTAAATTCTaGAGGTGTCGACGAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSNALTPAKSETANFLNEFQCKF*RCRRSL Trigger: CAAGCTTCGTCGACACCTTCAGAATTTACACTGGAA...TTCATTCAGAAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AATAAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTGAGATGTGTCTCTTaGTTTCAGCCTCCTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKNLKSNALTPAKSETANLRCVS*FQPPRG Trigger: TCCCCGAGGAGGCTGAAAGCAAGAGACACATCTCAA...ATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGTTTGACTGTTTTCTGTaGCTGGATTATCTGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKDCSGTETWAIIQNPEKFDCFL*LDYLSS Trigger: TGAACTCAGATAATCCAGGCACAGAAAACAGTCAAA...CTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAATTGTAACTTTGACTaGATTTCCAAGGTGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKDCSGTETWAIIQNPEKNCNFD*ISKVLC Trigger: GCAAAGCACCTTGGAAATGCAGTCAAAGTTACAATT...CTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
||
| CDS-3UTR CCA 90 bp | AAAATCCTCTCTTCACACCACTGGCAGTGGATCAGGTACTGGATTTTCTTGGCAAAGAAGATGAATCAGTaGCTCCAAAGGCATCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KILSSHHWQWIRYWIFLAKKMNQ*LQRHLN Trigger: GTTTAGATGCCTTTGGAGCCACTGATTCATCTTCTT...TGCCAAGAAAATCCAGTACCTGATCCACTGCCAGTGGTGTGAAGAGAGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTTCACACCACTGGCAGTaGATCAGGTACTGGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNLKSNALTPAKSETANFSHHWQ*IRYWIF Trigger: GAAAATCCAGTACCTGATCCACTGCCAGTGGTGTGA...AAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CCA 90 bp | AATAAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATGGGCAGCTGTCTGTATaGGTTTTCTTCCACCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKNLKSNALTPAKSETANGQLSV*VFFHHV Trigger: AACATGGTGGAAGAAAACCCATACAGACAGCTGCCC...ATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR TCA 90 bp | AATAAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATCCTGGTGATTGTTGCTaGACAAATGATGCAGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: NKNLKSNALTPAKSETANPGDCC*TNDAVI Trigger: TATCACTGCATCATTTGTTCAGCAACAATCACCAGG...ATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCTTGCCCTGTGCACTGTAAATATCTATTGTGGTATCATCGGTGGTTTTCCTGGTGATTGTTGCTaGACAAATGATGCAGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: FSLALCTVNIYCGIIGGFPGDCC*TNDAVI Trigger: TATCACTGCATCATTTGTTCAGCAACAATCACCAGG...AAAACCACCGATGATACCACAATAGATATTTACAGTGCACAGGGCAAGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTGAATGAAACGCCATTTTCTTCTTaGTTGTTGGTATTTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSNALTPAKSETANFLNETPFSS*LLVFEG Trigger: ACCTTCAAATACCAACAAGCAAGAAGAAAATGGCGT...TTCATTCAGAAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR GCA 90 bp | AATAAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATACTCGAAAGCCTGCTTaGGAAAGACAGCACAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NKNLKSNALTPAKSETANTRKPA*ERQHKN Trigger: ATTTTTGTGCTGTCTTTCGCAAGCAGGCTTTCGAGT...ATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CCA 90 bp | AATAAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATCTGAGTTCAATGAACTaGCAGAGTCAACATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKNLKSNALTPAKSETANLSSMN*QSQHLL Trigger: AAGGAGATGTTGACTCTGCCAGTTCATTGAACTCAG...ATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CAA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCACCGTGCTGCAGCTCTaGCCACTGCAGCTACGACAA | + |
|
Preference number: 5 (lower is better) Translates to: DCSGTETWAIIQNPEKNPTVLQL*PLQLRQ Trigger: TTGTCGTAGCTGCAGTGGCAAGAGCTGCAGCACGGT...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CAA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCGCAACATGCTGTGCCTaGGCATACAAGGAGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: DCSGTETWAIIQNPEKNPATCCA*AYKELM Trigger: CATCAGCTCCTTGTATGCCAAGGCACAGCATGTTGC...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS TCA 90 bp | CCTTCAGTCCCAAAAGCTAACTTCTCCAGGTCAGCAAGCCGCCTTTaGATTGAGATGTGTCTCTTGCTTTCAGCCTCCTCGGGGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSVPKANFSRSASRL*IEMCLLLSASSGTE Trigger: CTCTGTCCCCGAGGAGGCTGAAAGCAAGAGACACATCTCAATTCAAAGGCGGCTTGCTGACCTGGAGAAGTTAGCTTTTGGGACTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CAA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCACTTCTATACCTTTGTaGCACCGTGCTGCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DCSGTETWAIIQNPEKNPTSIPL*HRAAAL Trigger: AAGAGCTGCAGCACGGTGCAACAAAGGTATAGAAGT...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CAA 90 bp | AGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACATCGGTCTTCTGCTTTTaGGCTAGGTTAATGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SGTETWAIIQNPEKNPLTSVFCF*ARLMAI Trigger: GATGGCCATTAACCTAGCCAAAAAGCAGAAGACCGA...TGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CAA 90 bp | GCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCATACTCGAAAGCCTGCTaGCGAAAGACAGCACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AAVQRLGPSYRTLRRTPSYSKAC*RKTAQK Trigger: TTTTTGTGCTGTCTTTCGCAAGCAGGCTTTCGAGTA...TGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
||
| CDS-3UTR CAA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCAAGCCGCCTTTGAATaGAGATGTGTCTCTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: DCSGTETWAIIQNPEKNPQAAFE*RCVSCF Trigger: AAAGCAAGAGACACATCTCAATTCAAAGGCGGCTTG...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR CAA 90 bp | AGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCCTCACACCATTTTCTTCTTGCTaGTTGGTATTTGAAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SGTETWAIIQNPEKNPLTPFSSC*LVFEGA Trigger: TGCACCTTCAAATACCAACAAGCAAGAAGAAAATGG...TGTGAGGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS CCA 90 bp | GTAGAAGCAGCAATGTACCTGGATTTAGTTTCCCCTTTGTTGACATaGCGCTTAACATGCCCTAGCATGTCAGTCCTCCTGGTGATTGTT | + |
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Preference number: 5 (lower is better) Translates to: VEAAMYLDLVSPLLT*RLTCPSMSVLLVIV Trigger: AACAATCACCAGGAGGACTGACATGCTAGGGCATGTTAAGCGCCATGTCAACAAAGGGGAAACTAAATCCAGGTACATTGCTGCTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
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| CDS-3UTR CAA 90 bp | AAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTGAATGAAATTGAGATGTGTCTCTaGCTTTCAGCCTCCTCGGGG | + |
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Preference number: 5 (lower is better) Translates to: KSNALTPAKSETANFLNEIEMCL*LSASSG Trigger: CCCCGAGGAGGCTGAAAGCAAGAGACACATCTCAAT...TTCATTCAGAAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR CAA 90 bp | TACTTTAGCAAGATGGATTTAAACTGCATCAGAGGGGCATCGGTACGGATGCCCCATTTCCAAGGTGCTTaGCCCACTGTAATCCCATTA | + |
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Preference number: 5 (lower is better) Translates to: YFSKMDLNCIRGASVRMPHFQGA*PTVIPL Trigger: TAATGGGATTACAGTGGGCAAAGCACCTTGGAAATG...GGGCATCCGTACCGATGCCCCTCTGATGCAGTTTAAATCCATCTTGCTAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189655.2 |
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| CDS-3UTR CAA 90 bp | GATTGCAGCGGTACAGAGACTTGGGCCATCATACAGAACCCTGAGAAGAACCCCTCATTAATTGTAACTTaGACTGCATTTCCAAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: DCSGTETWAIIQNPEKNPSLIVT*TAFPRC Trigger: GCACCTTGGAAATGCAGTCAAAGTTACAATTAATGA...GGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTGCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS GCA 90 bp | ATGTACCTGGATTTAGTTTCCCCTTTGTTGACATGGCGCTTAACATaGCCTAGCATGTCAGTCCTCCTGGTGATTGTTGCTGAACAAATG | + |
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Preference number: 5 (lower is better) Translates to: MYLDLVSPLLTWRLT*PSMSVLLVIVAEQM Trigger: CATTTGTTCAGCAACAATCACCAGGAGGACTGACATGCTAGGGCATGTTAAGCGCCATGTCAACAAAGGGGAAACTAAATCCAGGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
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| CDS-3UTR CAA 90 bp | AATAAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATAGGTGCATCAGAACATaGGCGTCCATCCTGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: NKNLKSNALTPAKSETANRCIRT*ASILVT Trigger: GGTGACCAGGATGGACGCCAATGTTCTGATGCACCT...ATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR CAA 90 bp | AAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTGAATGAACATTTCCAAGGTGCTTaGCCCACTGTAATCCCATTA | + |
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Preference number: 5 (lower is better) Translates to: KSNALTPAKSETANFLNEHFQGA*PTVIPL Trigger: TAATGGGATTACAGTGGGCAAAGCACCTTGGAAATG...TTCATTCAGAAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
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| CDS-3UTR CAA 90 bp | AAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTGAATGAATTGAGGAATCCAGTATaGAAAAGGGAACTTGACCAC | + |
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Preference number: 5 (lower is better) Translates to: KSNALTPAKSETANFLNELRNPV*KRELDH Trigger: GTGGTCAAGTTCCCTTTTCAATACTGGATTCCTCAA...TTCATTCAGAAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS-3UTR CAA 90 bp | AAAAACTTAAAAAGCAACGCTCTCACACCAGCCAAGTCAGAAACAGCCAATTTTCTTGCTTGTTGGTATTaGAAGGTGCATGAGTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: KNLKSNALTPAKSETANFLACWY*KVHELN Trigger: GTTCAACTCATGCACCTTCAAATACCAACAAGCAAG...AAAATTGGCTGTTTCTGACTTGGCTGGTGTGAGAGCGTTGCTTTTTAAGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS TCA 90 bp | AAAAACTTGTATGTCTGTGTCTGTCTCCTTCAAAATCTCATTAGATaGTTTGGCAGTAGAAGCAGCAATGTACCTGGATTTAGTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: KNLYVCVCLLQNLIR*FGSRSSNVPGFSFP Trigger: GGGGAAACTAAATCCAGGTACATTGCTGCTTCTACTGCCAAATCATCTAATGAGATTTTGAAGGAGACAGACACAGACATACAAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
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| CDS GCA 72 bp | CGAGTCCGGCGTCGGAGCCGAGTCCAGAGCCGTATCTaGGGCCGGAGCTGGGACCGGAGCCGAATCCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RVRRRSRVQSRI*GRSWDRSRIRG Trigger: GCCCCGGATTCGGCTCCGGTCCCAGCTCCGGCCGCAGATACGGCTCTGGACTCGGCTCCGACGCCGGACTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS CCA 72 bp | GGGCGCCCAGTTTACTGGATATCTGTTCTCCAACGATaGTTGGCTTCACCGGGCGGCAGGCTAAGTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: GRPVYWISVLQR*LASPGGRLSDR Trigger: TCTGTCACTTAGCCTGCCGCCCGGTGAAGCCAACCATCGTTGGAGAACAGATATCCAGTAAACTGGGCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
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| CDS CAA 72 bp | CGCCCAGTTTACTGGATATCTGTTCTCCAACGATGGTaGGCTTCACCGGGCGGCAGGCTAAGTGACAGATGC | + |
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Preference number: 6 (lower is better) Translates to: RPVYWISVLQRW*ASPGGRLSDRC Trigger: GCATCTGTCACTTAGCCTGCCGCCCGGTGAAGCCAACCATCGTTGGAGAACAGATATCCAGTAAACTGGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
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| CDS CAA 90 bp | CAGTCCCAAAAGCTAACTTCTCCAGGTCAGCAAGCCGCCTTTGAATaGAGATGTGTCTCTTGCTTTCAGCCTCCTCGGGGACAGAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: QSQKLTSPGQQAAFE*RCVSCFQPPRGQRL Trigger: TAGCCTCTGTCCCCGAGGAGGCTGAAAGCAAGAGACACATCTCAATTCAAAGGCGGCTTGCTGACCTGGAGAAGTTAGCTTTTGGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS CAA 90 bp | GATAATGGGCGCCCAGTTTACTGGATATCTGTTCTCCAACGATGGTaGGCTTCACCGGGCGGCAGGCTAAGTGACAGATGCACATTCTGT | + |
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Preference number: 6 (lower is better) Translates to: DNGRPVYWISVLQRW*ASPGGRLSDRCTFC Trigger: ACAGAATGTGCATCTGTCACTTAGCCTGCCGCCCGGTGAAGCCAACCATCGTTGGAGAACAGATATCCAGTAAACTGGGCGCCCATTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS CAA 72 bp | AAGCTAACTTCTCCAGGTCAGCAAGCCGCCTTTGAATaGAGATGTGTCTCTTGCTTTCAGCCTCCTCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: KLTSPGQQAAFE*RCVSCFQPPRG Trigger: TCCCCGAGGAGGCTGAAAGCAAGAGACACATCTCAATTCAAAGGCGGCTTGCTGACCTGGAGAAGTTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS TCA 72 bp | CCAAAAGCTAACTTCTCCAGGTCAGCAAGCCGCCTTTaGATTGAGATGTGTCTCTTGCTTTCAGCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PKANFSRSASRL*IEMCLLLSASS Trigger: CGAGGAGGCTGAAAGCAAGAGACACATCTCAATTCAAAGGCGGCTTGCTGACCTGGAGAAGTTAGCTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS GCA 72 bp | TGGTTGGCTTCACCGGGCGGCAGGCTAAGTGACAGATaGACATTCTGTAGCCTTCAAATTCAACTGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: WLASPGGRLSDR*TFCSLQIQLRF Trigger: AAATCTCAGTTGAATTTGAAGGCTACAGAATGTGCATCTGTCACTTAGCCTGCCGCCCGGTGAAGCCAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065625.12 |
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| CDS CCA 72 bp | GCAATGTACCTGGATTTAGTTTCCCCTTTGTTGACATaGCGCTTAACATGCCCTAGCATGTCAGTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: AMYLDLVSPLLT*RLTCPSMSVLL Trigger: CAGGAGGACTGACATGCTAGGGCATGTTAAGCGCCATGTCAACAAAGGGGAAACTAAATCCAGGTACATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065625.12 ENSMUST00000189655.2 |
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