Pregenerated sensors for TRMT13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033439Ensembl transcript IDs: ENSMUST00000041524.11, ENSMUST00000134761.2, ENSMUST00000183638.8, ENSMUST00000184963.8, ENSMUST00000197190.5, ENSMUST00000198454.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGTCTCCAGTCACACCTGTGGTGACAACAGAGCGCAATCACAATaGCAGCCACCGGGGTCCATGTCTCTGGGACATCTTTTTCACTTC | + |
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Preference number: 1 (lower is better) Translates to: NVSSHTCGDNRAQSQ*QPPGSMSLGHLFHF Trigger: GAAGTGAAAAAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTGATTGCGCTCTGTTGTCACCACAGGTGTGACTGGAGACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR GCA 90 bp | TGGAGTAACATCCGAGCCTTCCAACGATGTCCTCATTCCACACGTTaGCCAACTACTCATTCTCTGGAAATAGTAGAACTCTACCGCCCC | + |
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Preference number: 1 (lower is better) Translates to: WSNIRAFQRCPHSTR*PTTHSLEIVELYRP Trigger: GGGGCGGTAGAGTTCTACTATTTCCAGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGGACATCGTTGGAAGGCTCGGATGTTACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR CCA 90 bp | ACAACAGAGCGCAATCACAATGCCAGCCACCGGGGTCCATGTCTCTaGGACATCTTTTTCACTTCCTTCCTTGGCCAAAGTGTTACTTTC | + |
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Preference number: 1 (lower is better) Translates to: TTERNHNASHRGPCL*DIFFTSFLGQSVTF Trigger: GAAAGTAACACTTTGGCCAAGGAAGGAAGTGAAAAAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTGATTGCGCTCTGTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR TCA 90 bp | GTGAGTCTGTCTCCTCCATCATCGTGCTCTTCATTCTCATCCCTTTaGGCATCTTTTCTCTCTGGAGTAACATCCGAGCCTTCCAACGAT | + |
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Preference number: 1 (lower is better) Translates to: VSLSPPSSCSSFSSL*ASFLSGVTSEPSND Trigger: ATCGTTGGAAGGCTCGGATGTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGATGGAGGAGACAGACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR TCA 90 bp | TTCTCTGGAAATAGTAGAACTCTACCGCCCCAAGTCCAAGAGCCTTaGAATACTCTTTGCCCACATAATGTCTCCAGTCACACCTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: FSGNSRTLPPQVQEP*NTLCPHNVSSHTCG Trigger: ACCACAGGTGTGACTGGAGACATTATGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTTGGGGCGGTAGAGTTCTACTATTTCCAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR CCA 90 bp | TCTTTATGCGTTTGGCTAAAGGTTCTTCATCCTTTTCCTCAAAACTaGCAGCATAGGTTTCAACCAAACATCGTAATGCAACATCTGTCG | + |
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Preference number: 1 (lower is better) Translates to: SLCVWLKVLHPFPQN*QHRFQPNIVMQHLS Trigger: CGACAGATGTTGCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAAGAACCTTTAGCCAAACGCATAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR TCA 90 bp | CTGACTCAAATGCCAAGCTCTATACATTCTGATGGAGAAAGTAATTaGAAGAGCCCTGCTGAAAAGGAATACTTTGACTACTTGGTGAAT | + |
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Preference number: 1 (lower is better) Translates to: LTQMPSSIHSDGESN*KSPAEKEYFDYLVN Trigger: ATTCACCAAGTAGTCAAAGTATTCCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR TCA 90 bp | TGCTCAGGAATCTCTGTTTCATCCTTTAATCCTGCATTTATATCTTaGATAAAGAAATCCACCGAATATGACTTCCCAGCCTCAACCACA | + |
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Preference number: 1 (lower is better) Translates to: CSGISVSSFNPAFIS*IKKSTEYDFPASTT Trigger: TGTGGTTGAGGCTGGGAAGTCATATTCGGTGGATTTCTTTATTCAAGATATAAATGCAGGATTAAAGGATGAAACAGAGATTCCTGAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134761.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTGACAACAGAGCGCAATCACAATGCCAGCCACCGGGGTCCATGTCTCTGACCAAGTCAACTGTCTaGCTCAAATGCCAAGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: CGDNRAQSQCQPPGSMSLTKSTV*LKCQAL Trigger: TAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGT...CAGAGACATGGACCCCGGTGGCTGGCATTGTGATTGCGCTCTGTTGTCACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAGTCACACCTGTGGTGACAACAGAGCGCAATCACAATGCCAGCCACCGGATGGAGAAAGTAATTaGAAGAGCCCTGCTGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VSSHTCGDNRAQSQCQPPDGESN*KSPAEK Trigger: CTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATC...CGGTGGCTGGCATTGTGATTGCGCTCTGTTGTCACCACAGGTGTGACTGGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR CAA 90 bp | TGTGAGTCTGTCTCCTCCATCATCGTGCTCTTCATTCTCATCCCTTaGAGCATCTTTTCTCTCTGGAGTAACATCCGAGCCTTCCAACGA | + |
|
Preference number: 2 (lower is better) Translates to: CESVSSIIVLFILIP*SIFSLWSNIRAFQR Trigger: TCGTTGGAAGGCTCGGATGTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGATGGAGGAGACAGACTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACAATGCCAGCCACCGGGGTCCATGTCTCTGGGACATCTTTTTCACTTCCTCCTTTTCCTCAAAACTaGCAGCATAGGTTTCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: ITMPATGVHVSGTSFSLPPFPQN*QHRFQP Trigger: TGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGG...AGGAAGTGAAAAAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTCTTTGCCACCCCACACAGGTaGTTCCCAATTCCTACCACG | + |
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Preference number: 2 (lower is better) Translates to: WSLPWSISSLQRCPIFFFATPHR*FPIPTT Trigger: CGTGGTAGGAATTGGGAAGCACCTGTGTGGGGTGGC...AAAGAAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAATGGAACTAATTGCTCAGGAATCTCTGTTTCATCCTTTAATCCTGCATTTGACCGGGCTGCTGCCTaGCCTCTGTTGCTGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: ENGTNCSGISVSSFNPAFDRAAA*PLLLVD Trigger: ATCCACCAGCAACAGAGGCCAGGCAGCAGCCCGGTC...AAATGCAGGATTAAAGGATGAAACAGAGATTCCTGAGCAATTAGTTCCATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134761.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTACCACGGGCAGTCTTCCTTCTCTTAGCACAGGAACCCTGTTCAAACACATGCTGGATATCAATTTaGAGCCTTTCAAACACTGAG | + |
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Preference number: 2 (lower is better) Translates to: FLPRAVFLLLAQEPCSNTCWISI*SLSNTE Trigger: CTCAGTGTTTGAAAGGCTTCAAATTGATATCCAGCA...TGTGTTTGAACAGGGTTCCTGTGCTAAGAGAAGGAAGACTGCCCGTGGTAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR-3UTR GCA 90 bp | ATCATCGTGCTCTTCATTCTCATCCCTTTGAGCATCTTTTCTCTCTGGAGTAACCCTCATTCCACACGTTaGCCAACTACTCATTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: IIVLFILIPLSIFSLWSNPHSTR*PTTHSL Trigger: CAGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGG...GTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR GCA 90 bp | CGGCAGTTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTACCTCATTCCACACGTTaGCCAACTACTCATTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RQLIIRFPETPMGPYSTVPHSTR*PTTHSL Trigger: CAGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGG...TACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAACTGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCTGCTGTAAATACTGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGAAGCATCTTTTCTCTCTaGAGTAACATCCGAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PFCCKYWSLPWSISSLQRSIFSL*SNIRAF Trigger: GAAGGCTCGGATGTTACTCCAGAGAGAAAAGATGCT...TCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCAGTATTTACAGCAGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCATCATCGTGCTCTTCATTCTCATCCCTTTGAGCATCTTTTCTCTCTGTTTCACTTCCTTCCTTaGCCAAAGTGTTACTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLHHRALHSHPFEHLFSLFHFLP*PKCYFL Trigger: AAGAAAGTAACACTTTGGCCAAGGAAGGAAGTGAAA...CAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGATGGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGGATGGAGAAAGTAATTaGAAGAGCCCTGCTGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QALYILMEKVIERALLKRDGESN*KSPAEK Trigger: CTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATC...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CCA 90 bp | ATACTGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTAGCATCTTTTCTCTCTaGAGTAACATCCGAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ILESALVNQQFTKMSYFLSIFSL*SNIRAF Trigger: GAAGGCTCGGATGTTACTCCAGAGAGAAAAGATGCT...AAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CCA 90 bp | TTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGCAGTACTGGAGTCTGCCTTaGTCAATCAGCAGTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: LIIRFPETPMGPYSTVRQYWSLP*SISSLQ Trigger: TTGTAAACTGCTGATTGACCAAGGCAGACTCCAGTA...CTGCCTTACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCAGTTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTACATTCTTTATGCGTTTaGCTAAAGGTTCTTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: RQLIIRFPETPMGPYSTVHSLCV*LKVLHP Trigger: AGGATGAAGAACCTTTAGCCAAACGCATAAAGAATG...TACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAACTGCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR CCA 72 bp | ACCACAGTGACCGGGCTGCTGCCTGGCCTCTGTTGCTaGTGGATGGCTGAGTCTGGTCCGTTGGGACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: TTVTGLLPGLCC*WMAESGPLGLL Trigger: GAGCAGTCCCAACGGACCAGACTCAGCCATCCACCAGCAACAGAGGCCAGGCAGCAGCCCGGTCACTGTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134761.2 |
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| 3UTR TCA 72 bp | AATCCACCGAATATGACTTCCCAGCCTCAACCACAGTaGCCGGGCTGCTGCCTGGCCTCTGTTGCTGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: NPPNMTSQPQPQ*PGCCLASVAGG Trigger: TCCACCAGCAACAGAGGCCAGGCAGCAGCCCGGTCACTGTGGTTGAGGCTGGGAAGTCATATTCGGTGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134761.2 |
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| 3UTR GCA 72 bp | AGTCACACCTGTGGTGACAACAGAGCGCAATCACAATaGCAGCCACCGGGGTCCATGTCTCTGGGACATCTT | + |
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Preference number: 3 (lower is better) Translates to: SHTCGDNRAQSQ*QPPGSMSLGHL Trigger: AAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTGATTGCGCTCTGTTGTCACCACAGGTGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR GCA 72 bp | CATCGTAATGCAACATCTGTCGCCACCCCACACAGGTaGTTCCCAATTCCTACCACGGGCAGTCTTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: HRNATSVATPHR*FPIPTTGSLPS Trigger: AGAAGGAAGACTGCCCGTGGTAGGAATTGGGAAGCACCTGTGTGGGGTGGCGACAGATGTTGCATTACGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGGTGACAACAGAGCGCAATCACAATGCCAGCCACCGGGGTCCATGTCTCTGTCCTCATTCCACACGTaGCCCAACTACTCATTCTCT | + |
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Preference number: 3 (lower is better) Translates to: CGDNRAQSQCQPPGSMSLSSFHT*PNYSFS Trigger: AGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGGA...CAGAGACATGGACCCCGGTGGCTGGCATTGTGATTGCGCTCTGTTGTCACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR CCA 72 bp | CGCAATCACAATGCCAGCCACCGGGGTCCATGTCTCTaGGACATCTTTTTCACTTCCTTCCTTGGCCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: RNHNASHRGPCL*DIFFTSFLGQS Trigger: ACTTTGGCCAAGGAAGGAAGTGAAAAAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTGATTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR TCA 72 bp | TCTCCTCCATCATCGTGCTCTTCATTCTCATCCCTTTaGGCATCTTTTCTCTCTGGAGTAACATCCGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: SPPSSCSSFSSL*ASFLSGVTSEP Trigger: AGGCTCGGATGTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGATGGAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR TCA 72 bp | AATAGTAGAACTCTACCGCCCCAAGTCCAAGAGCCTTaGAATACTCTTTGCCCACATAATGTCTCCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: NSRTLPPQVQEP*NTLCPHNVSSH Trigger: GTGACTGGAGACATTATGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTTGGGGCGGTAGAGTTCTACTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGGGCAAACTGTCAGTGTaGCCATCTGTGAGTCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: QLIIRFPETPMGPYSTVRGKLSV*PSVSLS Trigger: AGACAGACTCACAGATGGCAACACTGACAGTTTGCC...CCTTACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR CCA 72 bp | TGTAAGGCAGGACTGAAGCCTTTCTGCTGTAAATACTaGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGA | + |
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Preference number: 3 (lower is better) Translates to: CKAGLKPFCCKY*SLPWSISSLQR Trigger: TCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCAGTATTTACAGCAGAAAGGCTTCAGTCCTGCCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTCTTTGGCAAACTGTCAGTGTaGCCATCTGTGAGTCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: WSLPWSISSLQRCPIFFFGKLSV*PSVSLS Trigger: AGACAGACTCACAGATGGCAACACTGACAGTTTGCC...AAAGAAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTCTTTTCCTCATTCCACACGTaGCCCAACTACTCATTCTCT | + |
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Preference number: 3 (lower is better) Translates to: WSLPWSISSLQRCPIFFFSSFHT*PNYSFS Trigger: AGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGGA...AAAGAAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR CCA 72 bp | CTGAAGCCTTTCTGCTGTAAATACTGGAGTCTGCCTTaGTCAATCAGCAGTTTACAAAGATGTCCTATTTTC | + |
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Preference number: 3 (lower is better) Translates to: LKPFCCKYWSLP*SISSLQRCPIF Trigger: GAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCAGTATTTACAGCAGAAAGGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR-3UTR CAA 90 bp | CGGCAGTTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTATGTTTACCATCTACCTaGAATCTTGTGGTCACTCTT | + |
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Preference number: 3 (lower is better) Translates to: RQLIIRFPETPMGPYSTVCLPST*NLVVTL Trigger: AAGAGTGACCACAAGATTCAAGGTAGATGGTAAACA...TACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAACTGCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGTCATTCTTTATGCGTTaGGCTAAAGGTTCTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: QALYILMEKVIERALLKRSFFMR*AKGSSS Trigger: GGATGAAGAACCTTTAGCCAAACGCATAAAGAATGA...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
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| 3UTR TCA 72 bp | ATGCCAAGCTCTATACATTCTGATGGAGAAAGTAATTaGAAGAGCCCTGCTGAAAAGGAATACTTTGACTAC | + |
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Preference number: 3 (lower is better) Translates to: MPSSIHSDGESN*KSPAEKEYFDY Trigger: GTAGTCAAAGTATTCCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| 3UTR TCA 72 bp | ATCTCTGTTTCATCCTTTAATCCTGCATTTATATCTTaGATAAAGAAATCCACCGAATATGACTTCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: ISVSSFNPAFIS*IKKSTEYDFPA Trigger: GGCTGGGAAGTCATATTCGGTGGATTTCTTTATTCAAGATATAAATGCAGGATTAAAGGATGAAACAGAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134761.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTCAACCACAGTGACCGGGCTGCTGCCTGGCCTCTGTTGCTGGTGGATAAATGTTTTGCTAGTTaGTCTTCATACACTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: PSLNHSDRAAAWPLLLVDKCFAS*SSYTVC Trigger: ACACACAGTGTATGAAGACCAACTAGCAAAACATTT...ATCCACCAGCAACAGAGGCCAGGCAGCAGCCCGGTCACTGTGGTTGAGGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134761.2 |
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| CDS-3UTR TCA 90 bp | CGAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACTACTCATTCTCTGGCTGTTTCAGGTGTTTaGCTGCACAATCGCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: RAFQRCPHSTRCPTTHSLAVSGV*LHNRHS Trigger: GGAATGGCGATTGTGCAGTCAAACACCTGAAACAGC...CAGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGGACATCGTTGGAAGGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| CDS-3UTR GCA 90 bp | CTCTTCATTCTCATCCCTTTGAGCATCTTTTCTCTCTGGAGTAACATCCGAGCCGCCACCCCACACAGGTaGTTCCCAATTCCTACCACG | + |
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Preference number: 4 (lower is better) Translates to: LFILIPLSIFSLWSNIRAATPHR*FPIPTT Trigger: CGTGGTAGGAATTGGGAAGCACCTGTGTGGGGTGGC...GGCTCGGATGTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
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| CDS-3UTR CCA 90 bp | AGGGTAATGAGGCTTCCTGTGACTTTAGACTTAACTCTCCAGGAAAACACCTTATCAAAGGGGCGAGACTaGGGTCCAGCACCCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: RVMRLPVTLDLTLQENTLSKGRD*GPAPTD Trigger: GTCTGTGGGTGCTGGACCCCAGTCTCGCCCCTTTGA...TAAGGTGTTTTCCTGGAGAGTTAAGTCTAAAGTCACAGGAAGCCTCATTACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
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| CDS-3UTR GCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGAGCCACCCCACACAGGTaGTTCCCAATTCCTACCACG | + |
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Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGATPHR*FPIPTT Trigger: CGTGGTAGGAATTGGGAAGCACCTGTGTGGGGTGGC...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
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| CDS-3UTR CCA 90 bp | AGGGTAATGAGGCTTCCTGTGACTTTAGACTTAACTCTCCAGGAAAACACCTTACGCGGCTCCGAGCGGTaGGCAGAACTGCATTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: RVMRLPVTLDLTLQENTLRGSER*AELHLL Trigger: AAGTAAATGCAGTTCTGCCCACCGCTCGGAGCCGCG...TAAGGTGTTTTCCTGGAGAGTTAAGTCTAAAGTCACAGGAAGCCTCATTACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
||
| 3UTR CAA 72 bp | GTCTCCTCCATCATCGTGCTCTTCATTCTCATCCCTTaGAGCATCTTTTCTCTCTGGAGTAACATCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSIIVLFILIP*SIFSLWSNIRA Trigger: GGCTCGGATGTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGATGGAGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | CGAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACTACTCATTCTCTGGCAATATCAACCCAGTaGGATAATTTCCCCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAFQRCPHSTRCPTTHSLAISTQ*DNFPFP Trigger: AGGAAAGGGGAAATTATCTCACTGGGTTGATATTGC...CAGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGGACATCGTTGGAAGGCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCATGTCTCTGGGACATCTTTTTCACTTCCTTCCTTGGCCAAAGTGTTACAAGGGCATCATGCAATaGTGGATGGGACATGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSMSLGHLFHFLPWPKCYKGIMQ*WMGHDV Trigger: CACATCATGTCCCATCCAGCATTGCATGATGCCCTT...GTAACACTTTGGCCAAGGAAGGAAGTGAAAAAGATGTCCCAGAGACATGGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGAGAGCGCAATCACAATaGCAGCCACCGGGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRRAQSQ*QPPGSM Trigger: CATGGACCCCGGTGGCTGGCATTGTGATTGCGCTCT...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR TCA 90 bp | GGTAATGAGGCTTCCTGTGACTTTAGACTTAACTCTCCAGGAAAACACCTTATGGAGTGTAAGGGTCTCTaGGACAGCAGAGGGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNEASCDFRLNSPGKHLMECKGL*DSRGSF Trigger: AAAGCTCCCTCTGCTGTCTCAGAGACCCTTACACTC...CATAAGGTGTTTTCCTGGAGAGTTAAGTCTAAAGTCACAGGAAGCCTCATTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTAATGAGGCTTCCTGTGACTTTAGACTTAACTCTCCAGGAAAACACCTTAAATAATCACTTCCCCTaGGGATGGGGGACTAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVMRLPVTLDLTLQENTLNNHFP*GWGTSG Trigger: TCCGCTAGTCCCCCATCCTCAGGGGAAGTGATTATT...TAAGGTGTTTTCCTGGAGAGTTAAGTCTAAAGTCACAGGAAGCCTCATTACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
||
| CDS-3UTR GCA 90 bp | GGACTGAAGCCTTTCTGCTGTAAATACTGGAGTCTGCCTTGGTCAATCAGCAGTTCATTAAGGGCATCATaGAATGCTGGATGGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: GLKPFCCKYWSLPWSISSSLRAS*NAGWDM Trigger: CATGTCCCATCCAGCATTGCATGATGCCCTTAATGA...ACTGCTGATTGACCAAGGCAGACTCCAGTATTTACAGCAGAAAGGCTTCAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGCAGTCACACCTGTGGTaGCAACAGAGCGCAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRQSHLW*QQSAIT Trigger: TGTGATTGCGCTCTGTTGTCACCACAGGTGTGACTG...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR GCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGACGAAGTAGTTGCATCTaGCGTCGATGGGAAATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGRSSCI*RRWEIR Trigger: TCGGATTTCCCATCGACGGCAGATGCAACTACTTCG...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTAATGAGGCTTCCTGTGACTTTAGACTTAACTCTCCAGGAAAACACCTTACGAAGTAGTTGCATCTaGCGTCGATGGGAAATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVMRLPVTLDLTLQENTLRSSCI*RRWEIR Trigger: TCGGATTTCCCATCGACGGCAGATGCAACTACTTCG...TAAGGTGTTTTCCTGGAGAGTTAAGTCTAAAGTCACAGGAAGCCTCATTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCATCATCGTGCTCTTCATTCTCATCCCTTTGAGCATCTTTTCTCTCTGTCATTAAGGGCATCATaGAATGCTGGATGGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: LLHHRALHSHPFEHLFSLSLRAS*NAGWDM Trigger: CATGTCCCATCCAGCATTGCATGATGCCCTTAATGA...CAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGATGGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGACGGGGTCCATGTCTCTaGGACATCTTTTTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGRGPCL*DIFFTS Trigger: GGAAGTGAAAAAGATGTCCCAGAGACATGGACCCCG...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR TCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGGCTGTTTCAGGTGTTTaGCTGCACAATCGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRAVSGV*LHNRHS Trigger: GGAATGGCGATTGTGCAGTCAAACACCTGAAACAGC...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGCAGCGAAGTAGTTGCATCTaGCGTCGATGGGAAATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LIIRFPETPMGPYSTVRQRSSCI*RRWEIR Trigger: TCGGATTTCCCATCGACGGCAGATGCAACTACTTCG...CTGCCTTACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATGCTGTTTCAGGTGTTTaGCTGCACAATCGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYAVSGV*LHNRHS Trigger: GGAATGGCGATTGTGCAGTCAAACACCTGAAACAGC...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATCGAAGTAGTTGCATCTaGCGTCGATGGGAAATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYRSSCI*RRWEIR Trigger: TCGGATTTCCCATCGACGGCAGATGCAACTACTTCG...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGCAGAAGGGCATCATGCAATaGTGGATGGGACATGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIIRFPETPMGPYSTVRQKGIMQ*WMGHDV Trigger: CACATCATGTCCCATCCAGCATTGCATGATGCCCTT...CTGCCTTACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGCCTCATTCCACACGTTaGCCAACTACTCATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRPHSTR*PTTHSL Trigger: CAGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGG...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR GCA 90 bp | AGGGTAATGAGGCTTCCTGTGACTTTAGACTTAACTCTCCAGGAAAACACCTTAAGCGGTGGGCAGAACTaGATTTACTTAAATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RVMRLPVTLDLTLQENTLSGGQN*IYLNPW Trigger: CCATGGATTTAAGTAAATGCAGTTCTGCCCACCGCT...TAAGGTGTTTTCCTGGAGAGTTAAGTCTAAAGTCACAGGAAGCCTCATTACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGGGCATCATGCAATGCTaGATGGGACATGATGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRGIMQC*MGHDVI Trigger: GATCACATCATGTCCCATCCAGCATTGCATGATGCC...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGAAGCATCTTTTCTCTCTaGAGTAACATCCGAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGSIFSL*SNIRAF Trigger: GAAGGCTCGGATGTTACTCCAGAGAGAAAAGATGCT...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR TCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGCAAGTCCAAGAGCCTTaGAATACTCTTTGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRQVQEP*NTLCPH Trigger: ATGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTTG...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGATCATTCTCATCCCTTTaGGCATCTTTTCTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGSFSSL*ASFLSG Trigger: TCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGA...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR GCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATAAGGGCATCATGCAATaGTGGATGGGACATGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYKGIMQ*WMGHDV Trigger: CACATCATGTCCCATCCAGCATTGCATGATGCCCTT...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGTCATTAAGGGCATCATaGAATGCTGGATGGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRSLRAS*NAGWDM Trigger: CATGTCCCATCCAGCATTGCATGATGCCCTTAATGA...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGAGTAAATACTGGAGTCTaGCTTGGTCAATCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGVNTGV*LGQSAV Trigger: AACTGCTGATTGACCAAGGCAGACTCCAGTATTTAC...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR CCA 90 bp | GGACTGAAGCCTTTCTGCTGTAAATACTGGAGTCTGCCTTGGTCAATCAGCAGTAAATGTTTTGCTAGTTaGTCTTCATACACTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLKPFCCKYWSLPWSISSKCFAS*SSYTVC Trigger: ACACACAGTGTATGAAGACCAACTAGCAAAACATTT...ACTGCTGATTGACCAAGGCAGACTCCAGTATTTACAGCAGAAAGGCTTCAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGACCTTTTCCTCAAAACTaGCAGCATAGGTTTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGPFPQN*QHRFQP Trigger: TGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGG...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR CCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGATACTGGAGTCTGCCTTaGTCAATCAGCAGTTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGYWSLP*SISSLQ Trigger: TTGTAAACTGCTGATTGACCAAGGCAGACTCCAGTA...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR TCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGGCAATATCAACCCAGTaGGATAATTTCCCCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRAISTQ*DNFPFP Trigger: AGGAAAGGGGAAATTATCTCACTGGGTTGATATTGC...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | ATCATCGTGCTCTTCATTCTCATCCCTTTGAGCATCTTTTCTCTCTGGAGTAACCTCTTTCTACCAGGATaGAGTGAACATTTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIVLFILIPLSIFSLWSNLFLPG*SEHFQH Trigger: ATGCTGAAAATGTTCACTTCATCCTGGTAGAAAGAG...GTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGATGCTGGATATCAATTTaGAGCCTTTCAAACACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGCWISI*SLSNTE Trigger: CTCAGTGTTTGAAAGGCTTCAAATTGATATCCAGCA...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATCAAGTCCAAGAGCCTTaGAATACTCTTTGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYQVQEP*NTLCPH Trigger: ATGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTTG...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACTGTAAGGCAGGACTaGAGCCTTTCTGCTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYTVRQD*SLSAVN Trigger: ATTTACAGCAGAAAGGCTTCAGTCCTGCCTTACAGT...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCCTCCATCATCGTGCTCTTCATTCTCATCCCTTTGAGCATCTTTTCTCTCATTAAGTTCTCCAACTaGTCTTCAGATAGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIIVLFILIPLSIFSLIKFSN*SSDREE Trigger: TTCTTCTCTATCTGAAGAGCAGTTGGAGAACTTAAT...GAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGATGGAGGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGCAGCCTAGAATAGAAGCCTaGTGTTTCAGGTGTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRFPETPMGPYSTVRQPRIEA*CFRCLT Trigger: AGTCAAACACCTGAAACAGCAGGCTTCTATTCTAGG...CTGCCTTACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGTGCTGGATATCAATTTaGAGCCTTTCAAACACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLIIRFPETPMGPYSTVRCWISI*SLSNTE Trigger: CTCAGTGTTTGAAAGGCTTCAAATTGATATCCAGCA...CCTTACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATCCTAGAATAGAAGCCTaGTGTTTCAGGTGTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYPRIEA*CFRCLT Trigger: AGTCAAACACCTGAAACAGCAGGCTTCTATTCTAGG...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
||
| CDS-3UTR CCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATTTCTGCTGTAAATACTaGAGTCTGCCTTGGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYFCCKY*SLPWSI Trigger: GATTGACCAAGGCAGACTCCAGTATTTACAGCAGAA...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR TCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATCTCTTTCTACCAGGATaGAGTGAACATTTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYLFLPG*SEHFQH Trigger: ATGCTGAAAATGTTCACTTCATCCTGGTAGAAAGAG...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGAACATTTTCAGCATCTaGTGTTTCAGGTGTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRNIFSI*CFRCLT Trigger: AGTCAAACACCTGAAACAGCAGATGCTGAAAATGTT...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
||
| CDS-3UTR CCA 90 bp | ATCATCGTGCTCTTCATTCTCATCCCTTTGAGCATCTTTTCTCTCTGGAGTAACAAATGTTTTGCTAGTTaGTCTTCATACACTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIVLFILIPLSIFSLWSNKCFAS*SSYTVC Trigger: ACACACAGTGTATGAAGACCAACTAGCAAAACATTT...GTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGAAGAGCACGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGCATTCTTTATGCGTTTaGCTAAAGGTTCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRHSLCV*LKVLHP Trigger: AGGATGAAGAACCTTTAGCCAAACGCATAAAGAATG...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
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| CDS-3UTR TCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATTCTACCAGGATGAAGTaGACATTTTCAGCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYSTRMK*TFSASF Trigger: AAAAGATGCTGAAAATGTTCACTTCATCCTGGTAGA...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
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| CDS-3UTR TCA 90 bp | ATACTGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTTCTACCAGGATGAAGTaGACATTTTCAGCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILESALVNQQFTKMSYFLSTRMK*TFSASF Trigger: AAAAGATGCTGAAAATGTTCACTTCATCCTGGTAGA...AAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
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| CDS-3UTR GCA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGATTAAGTTCTCCAACTaGTCTTCAGATAGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QALYILMEKVIERALLKRIKFSN*SSDREE Trigger: TTCTTCTCTATCTGAAGAGCAGTTGGAGAACTTAAT...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| CDS-3UTR CCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATTTTCACTTCCTTCCTTaGCCAAAGTGTTACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYFHFLP*PKCYFL Trigger: AAGAAAGTAACACTTTGGCCAAGGAAGGAAGTGAAA...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
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| CDS-3UTR GCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATGAAAATGGAACTAATTaGTCAGGAATCTCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYENGTN*SGISVS Trigger: TGAAACAGAGATTCCTGAGCAATTAGTTCCATTTTC...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| CDS-3UTR GCA 90 bp | TGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTCTTTATTAAGTTCTCCAACTaGTCTTCAGATAGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSLPWSISSLQRCPIFFFIKFSN*SSDREE Trigger: TTCTTCTCTATCTGAAGAGCAGTTGGAGAACTTAAT...AAAGAAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| CDS-3UTR CCA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATAAATGTTTTGCTAGTTaGTCTTCATACACTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VISFRRPSQLSDSNAKLYKCFAS*SSYTVC Trigger: ACACACAGTGTATGAAGACCAACTAGCAAAACATTT...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| CDS TCA 90 bp | CCAGCACCCACAGACCCGCGACTCCCAGGAAGGGAGGGCGATAGCTaGCCTCGGCGGAGCCAGCGTGTTCGCCACAGAACCTTTTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PAPTDPRLPGREGDS*PRRSQRVRHRTFSP Trigger: CGGGGAAAAGGTTCTGTGGCGAACACGCTGGCTCCGCCGAGGTCAGCTATCGCCCTCCCTTCCTGGGAGTCGCGGGTCTGTGGGTGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
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| CDS GCA 90 bp | CCATCCTGCAGAAGCGCTTCTTCTTTTCTACGAAGTAGTTGCATCTaGCGTCGATGGGAAATCCGATCGAGGGCGAAGTCGCCGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSCRSASSFLRSSCI*RRWEIRSRAKSPPE Trigger: CTCCGGCGGCGACTTCGCCCTCGATCGGATTTCCCATCGACGGCAGATGCAACTACTTCGTAGAAAAGAAGAAGCGCTTCTGCAGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 ENSMUST00000198454.2 |
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| CDS GCA 90 bp | CCGCCACCATCCTGCAGAAGCGCTTCTTCTTTTCTACGAAGTAGTTaGATCTGCCGTCGATGGGAAATCCGATCGAGGGCGAAGTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPPSCRSASSFLRSS*ICRRWEIRSRAKSP Trigger: CGGCGACTTCGCCCTCGATCGGATTTCCCATCGACGGCAGATGCAACTACTTCGTAGAAAAGAAGAAGCGCTTCTGCAGGATGGTGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 ENSMUST00000198454.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGGCCTCTGTTGCTGGTGGATGGCTGAGTCTGGTCCGTTGGGACTGCTCCATACACTGTGTGTTTaGGATCTAAAGGACACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPGLCCWWMAESGPLGLLHTLCV*DLKDTR Trigger: TCTTGTGTCCTTTAGATCCAAAACACACAGTGTATG...GAGCAGTCCCAACGGACCAGACTCAGCCATCCACCAGCAACAGAGGCCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134761.2 |
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| CDS CCA 90 bp | AGAAGCCTGCTGTTTCAGGTGTTTGACTGCACAATCGCCATTCCTTaGGTCATTAAGGGCATCATGCAATGCTGGATGGGACATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLLFQVFDCTIAIP*VIKGIMQCWMGHDV Trigger: CACATCATGTCCCATCCAGCATTGCATGATGCCCTTAATGACCCAAGGAATGGCGATTGTGCAGTCAAACACCTGAAACAGCAGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 ENSMUST00000197190.5 |
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| CDS CCA 90 bp | CAGCATCTGCTGTTTCAGGTGTTTGACTGCACAATCGCCATTCCTTaGGTCATTAAGGGCATCATGCAATGCTGGATGGGACATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QHLLFQVFDCTIAIP*VIKGIMQCWMGHDV Trigger: CACATCATGTCCCATCCAGCATTGCATGATGCCCTTAATGACCCAAGGAATGGCGATTGTGCAGTCAAACACCTGAAACAGCAGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183638.8 |
||
| CDS-3UTR CAA 90 bp | GGACTGAAGCCTTTCTGCTGTAAATACTGGAGTCTGCCTTGGTCAATCAGCAGTCCAAGTCCAAGAGCCTaGAAATACTCTTTGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GLKPFCCKYWSLPWSISSPSPRA*KYSLPT Trigger: TGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTTGG...ACTGCTGATTGACCAAGGCAGACTCCAGTATTTACAGCAGAAAGGCTTCAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
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| CDS GCA 90 bp | GACTGCACAATCGCCATTCCTTGGGTCATTAAGGGCATCATGCAATaGTGGATGGGACATGATGTGATCTTCATGTGTAGAATTCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DCTIAIPWVIKGIMQ*WMGHDVIFMCRIQA Trigger: GGCTTGAATTCTACACATGAAGATCACATCATGTCCCATCCAGCATTGCATGATGCCCTTAATGACCCAAGGAATGGCGATTGTGCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 ENSMUST00000197190.5 |
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| CDS-3UTR CAA 90 bp | GAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACTACTCATTCTCTGGCATACACTGTGTGTTTaGGATCTAAAGGACACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EPSNDVLIPHVAQLLILWHTLCV*DLKDTR Trigger: TCTTGTGTCCTTTAGATCCAAAACACACAGTGTATG...CCAGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGGACATCGTTGGAAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| CDS CCA 90 bp | TGCACAATCGCCATTCCTTGGGTCATTAAGGGCATCATGCAATGCTaGATGGGACATGATGTGATCTTCATGTGTAGAATTCAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTIAIPWVIKGIMQC*MGHDVIFMCRIQAF Trigger: GAAGGCTTGAATTCTACACATGAAGATCACATCATGTCCCATCCAGCATTGCATGATGCCCTTAATGACCCAAGGAATGGCGATTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 ENSMUST00000197190.5 |
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| CDS-3UTR CAA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGATGCTGTTTCAGGTGTTaGACTGCACAATCGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGCCFRC*TAQSPF Trigger: GAATGGCGATTGTGCAGTCAAACACCTGAAACAGCA...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| CDS-3UTR CAA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGACCAAGTCCAAGAGCCTaGAAATACTCTTTGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGPSPRA*KYSLPT Trigger: TGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTTGG...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
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| CDS-3UTR CAA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGGGCAAACTGTCAGTGTaGCCATCTGTGAGTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QALYILMEKVIERALLKRGKLSV*PSVSLS Trigger: AGACAGACTCACAGATGGCAACACTGACAGTTTGCC...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
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| CDS-3UTR CAA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGTCCTCATTCCACACGTaGCCCAACTACTCATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QALYILMEKVIERALLKRSSFHT*PNYSFS Trigger: AGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGGA...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
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| CDS-3UTR CAA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGAATACTGGAGTCTGCCTaGGTCAATCAGCAGTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGILESA*VNQQFT Trigger: TGTAAACTGCTGATTGACCAAGGCAGACTCCAGTAT...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
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| CDS-3UTR CAA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGATGTTTACCATCTACCTaGAATCTTGTGGTCACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGCLPST*NLVVTL Trigger: AAGAGTGACCACAAGATTCAAGGTAGATGGTAAACA...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
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| CDS-3UTR CAA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGATTTTCACTTCCTTCCTaGGCCAAAGTGTTACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGFSLPS*AKVLLS Trigger: AGAAAGTAACACTTTGGCCAAGGAAGGAAGTGAAAA...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
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| CDS-3UTR CAA 90 bp | CAAGCTCTATACATTCTGATGGAGAAAGTAATTGAAAGAGCCCTGCTGAAAAGGCATACACTGTGTGTTTaGGATCTAAAGGACACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QALYILMEKVIERALLKRHTLCV*DLKDTR Trigger: TCTTGTGTCCTTTAGATCCAAAACACACAGTGTATG...CCTTTTCAGCAGGGCTCTTTCAATTACTTTCTCCATCAGAATGTATAGAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 |
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| CDS-3UTR CAA 90 bp | GAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGATTTAACTTTTCAATGTaGCCTAGAATAGAAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EDQVNCLTQMPSSIHSDGFNFSM*PRIEAC Trigger: GCAGGCTTCTATTCTAGGCAACATTGAAAAGTTAAA...TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 |
||
| CDS-3UTR CAA 90 bp | TTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGCAGTGTTTACCATCTACCTaGAATCTTGTGGTCACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIIRFPETPMGPYSTVRQCLPST*NLVVTL Trigger: AAGAGTGACCACAAGATTCAAGGTAGATGGTAAACA...CTGCCTTACAGTACTATACGGACCCATTGGTGTCTCTGGAAAACGTATTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
||
| CDS-3UTR CAA 90 bp | ATACTGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTCATACACTGTGTGTTTaGGATCTAAAGGACACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ILESALVNQQFTKMSYFLHTLCV*DLKDTR Trigger: TCTTGTGTCCTTTAGATCCAAAACACACAGTGTATG...AAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183638.8 ENSMUST00000184963.8 |
||
| CDS-3UTR CAA 90 bp | GTTATATCTTTCAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATTCATTCTTTATGCGTTaGGCTAAAGGTTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VISFRRPSQLSDSNAKLYSFFMR*AKGSSS Trigger: GGATGAAGAACCTTTAGCCAAACGCATAAAGAATGA...ATAGAGCTTGGCATTTGAGTCAGACAGTTGACTTGGTCTTCTGAAAGATATAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041524.11 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTCTTTTTTAACTTTTCAATGTaGCCTAGAATAGAAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WSLPWSISSLQRCPIFFFFNFSM*PRIEAC Trigger: GCAGGCTTCTATTCTAGGCAACATTGAAAAGTTAAA...AAAGAAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000184963.8 |
||
| CDS TCA 72 bp | ACAGACCCGCGACTCCCAGGAAGGGAGGGCGATAGCTaGCCTCGGCGGAGCCAGCGTGTTCGCCACAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: TDPRLPGREGDS*PRRSQRVRHRT Trigger: GGTTCTGTGGCGAACACGCTGGCTCCGCCGAGGTCAGCTATCGCCCTCCCTTCCTGGGAGTCGCGGGTCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
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| CDS CCA 72 bp | CAATGCTCCTCGGGGGCTCCTCGCGGCTCCGAGCGGTaGGCAGAACTGCATTTACTTAAATCCATGGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: QCSSGAPRGSER*AELHLLKSMGR Trigger: CCGTCCCATGGATTTAAGTAAATGCAGTTCTGCCCACCGCTCGGAGCCGCGAGGAGCCCCCGAGGAGCATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198454.2 |
||
| CDS GCA 72 bp | TCCTGCAGAAGCGCTTCTTCTTTTCTACGAAGTAGTTaGATCTGCCGTCGATGGGAAATCCGATCGAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SCRSASSFLRSS*ICRRWEIRSRA Trigger: CGCCCTCGATCGGATTTCCCATCGACGGCAGATGCAACTACTTCGTAGAAAAGAAGAAGCGCTTCTGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 ENSMUST00000198454.2 |
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| CDS GCA 72 bp | TTTTCAAATGTTTTGCTAGTTGGTCTTCATACACTGTaGTCGGCGGAGCCAGCGTGTTCGCCACAGAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: FSNVLLVGLHTL*SAEPACSPQNL Trigger: AAGGTTCTGTGGCGAACACGCTGGCTCCGCCGAGCACAGTGTATGAAGACCAACTAGCAAAACATTTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197190.5 |
||
| CDS CCA 72 bp | CTGTTTCAGGTGTTTGACTGCACAATCGCCATTCCTTaGGTCATTAAGGGCATCATGCAATGCTGGATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFQVFDCTIAIP*VIKGIMQCWMG Trigger: TCCCATCCAGCATTGCATGATGCCCTTAATGACCCAAGGAATGGCGATTGTGCAGTCAAACACCTGAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 ENSMUST00000197190.5 |
||
| CDS GCA 72 bp | ATCGCCATTCCTTGGGTCATTAAGGGCATCATGCAATaGTGGATGGGACATGATGTGATCTTCATGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IAIPWVIKGIMQ*WMGHDVIFMCR Trigger: TCTACACATGAAGATCACATCATGTCCCATCCAGCATTGCATGATGCCCTTAATGACCCAAGGAATGGCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041524.11 ENSMUST00000183638.8 ENSMUST00000184963.8 ENSMUST00000197190.5 |
||
| CDS CAA 72 bp | ATGTTGCCTAGAATAGAAGCCTGCTGTTTCAGGTGTTaGACTGCACAATCGCCATTCCTTGGGTCATTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: MLPRIEACCFRC*TAQSPFLGSLR Trigger: CCTTAATGACCCAAGGAATGGCGATTGTGCAGTCAAACACCTGAAACAGCAGGCTTCTATTCTAGGCAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 ENSMUST00000197190.5 |
||
| CDS CAA 72 bp | TCCCCTTTCCTGCTCCAAACTCAACAAAGCATCTTCTaGGGCCAAGTAACTTTAACTTTTCAATGTTGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SPFLLQTQQSIF*GQVTLTFQCCL Trigger: TAGGCAACATTGAAAAGTTAAAGTTACTTGGCCCAAGAAGATGCTTTGTTGAGTTTGGAGCAGGAAAGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 ENSMUST00000197190.5 |
||
| CDS CAA 72 bp | CATCTTCTTGGGCCAAGTAACTTTAACTTTTCAATGTaGCCTAGAATAGAAGCCTGCTGTTTCAGGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HLLGPSNFNFSM*PRIEACCFRCL Trigger: CAAACACCTGAAACAGCAGGCTTCTATTCTAGGCAACATTGAAAAGTTAAAGTTACTTGGCCCAAGAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041524.11 ENSMUST00000184963.8 ENSMUST00000197190.5 |
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