Pregenerated sensors for TRMT11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019792Ensembl transcript IDs: ENSMUST00000019927.7, ENSMUST00000215041.2, ENSMUST00000215595.2, ENSMUST00000216790.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGACACCTTCAGAAGCACAAGGGCCCTCGTGGAGGTCTTGGGGTTaGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: QTPSEAQGPSWRSWG*ILHSSQPLGFLASA Trigger: TGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTCTGAAGGTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR CCA 90 bp | AAGGAGCAGACACCTTCAGAAGCACAAGGGCCCTCGTGGAGGTCTTaGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: KEQTPSEAQGPSWRS*GWILHSSQPLGFLA Trigger: GGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTCTGAAGGTGTCTGCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR CCA 90 bp | AGCAAATCCAAGGAGCAGACACCTTCAGAAGCACAAGGGCCCTCGTaGAGGTCTTGGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: SKSKEQTPSEAQGPS*RSWGWILHSSQPLG Trigger: ACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTCTGAAGGTGTCTGCTCCTTGGATTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR TCA 90 bp | ATTTCTTTTGGTGGGAGAGGCTACAAGGGCAGACAGCAGATATGGTaGGACAAGGACATGGGTGGGACTGGGATGCATGAAATGAAATTC | + |
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Preference number: 1 (lower is better) Translates to: ISFGGRGYKGRQQIW*DKDMGGTGMHEMKF Trigger: GAATTTCATTTCATGCATCCCAGTCCCACCCATGTCCTTGTCTCACCATATCTGCTGTCTGCCCTTGTAGCCTCTCCCACCAAAAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR GCA 90 bp | GGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTaGATGGCCACTGTTATGACTAATATGGGATTTATGGTTAAACAT | + |
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Preference number: 1 (lower is better) Translates to: GLDSPQFSALRFPCL*MATVMTNMGFMVKH Trigger: ATGTTTAACCATAAATCCCATATTAGTCATAACAGTGGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR GCA 90 bp | TGGGTGTCAGAAACTTTGGAACTAGAGTTACAGATAGGTGTGAGCTaGCATGTGAATGCTGGGAATTGGATTCGGGTCTTATGGGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: WVSETLELELQIGVS*HVNAGNWIRVLWEN Trigger: ATTTTCCCATAAGACCCGAATCCAATTCCCAGCATTCACATGGCAGCTCACACCTATCTGTAACTCTAGTTCCAAAGTTTCTGACACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR TCA 90 bp | CTCCAGCCCCATCCCTCTATAGACATGCTCTTAACATGTACTTGCTaGCTACAAAATGCACACTCCATCTCTTCCATATTGTCTTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LQPHPSIDMLLTCTC*LQNAHSISSILSFS Trigger: TGAGAAAGACAATATGGAAGAGATGGAGTGTGCATTTTGTAGTCAGCAAGTACATGTTAAGAGCATGTCTATAGAGGGATGGGGCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR CAA 90 bp | GCAGACACCTTCAGAAGCACAAGGGCCCTCGTGGAGGTCTTGGGGTaGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ADTFRSTRALVEVLG*DSPQFSALRFPCLC Trigger: GCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTCTGAAGGTGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR CAA 90 bp | CAAGGAGCAGACACCTTCAGAAGCACAAGGGCCCTCGTGGAGGTCTaGGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: QGADTFRSTRALVEV*GLDSPQFSALRFPC Trigger: GCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTCTGAAGGTGTCTGCTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR-3UTR TCA 90 bp | GTGCTCTTAACCACGGAGCCATTGCTCCAGCCCCATCCCTCTATAGACATGCTCGTTCTTGGCCAGGGTTaGAGGGAATTTTTCTTATTC | + |
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Preference number: 2 (lower is better) Translates to: VLLTTEPLLQPHPSIDMLVLGQG*REFFLF Trigger: GAATAAGAAAAATTCCCTTCAACCCTGGCCAAGAAC...GAGCATGTCTATAGAGGGATGGGGCTGGAGCAATGGCTCCGTGGTTAAGAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTCTTAACCACGGAGCCATTGCTCCAGCCCCATCCCTCTATAGACATGCTCCTTCTTGTATTAAGATaGCAAGTTCTTGGCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VLLTTEPLLQPHPSIDMLLLVLR*QVLGQG Trigger: ACCCTGGCCAAGAACTTGTCATCTTAATACAAGAAG...GAGCATGTCTATAGAGGGATGGGGCTGGAGCAATGGCTCCGTGGTTAAGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTGCATGGCCACTACGCTCCTTCTTTCCTaGTTGTCAGCATCAGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LDSPQFSALRFPCLCMATTLLLS*LSASEF Trigger: AAACTCTGATGCTGACAATCAGGAAAGAAGGAGCGT...AGTGGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCATAGTGAGAGTTTTGTTTGATTTCTTTTGGTGGGAGAGGCTACAAGGGGGTGAGACAAGGACATaGGTGGGACTGGGATGCATG | + |
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Preference number: 2 (lower is better) Translates to: ASIVRVLFDFFWWERLQGGETRT*VGLGCM Trigger: CATGCATCCCAGTCCCACCCATGTCCTTGTCTCACC...CCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTATGGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR CAA 90 bp | ACTAGAGTTACAGATAGGTGTGAGCTGCCATGTGAATGCTGGGAATaGGATTCGGGTCTTATGGGAAAATCGTCAGTGCTCTTAACCACG | + |
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Preference number: 2 (lower is better) Translates to: TRVTDRCELPCECWE*DSGLMGKSSVLLTT Trigger: CGTGGTTAAGAGCACTGACGATTTTCCCATAAGACCCGAATCCAATTCCCAGCATTCACATGGCAGCTCACACCTATCTGTAACTCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTGGAGGTCTTGGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTTACCTACCATGTATGTaGCAGATACAATATTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SWRSWGWILHSSQPLGFLYLPCM*QIQYCL Trigger: AAGACAATATTGTATCTGCCACATACATGGTAGGTA...AAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR-3UTR TCA 90 bp | AGGATCTGTGATGATTGCATCAAAATATGTTCCCTTCCTCCAGGAAGGCTTAGATTCTCTAAGCCATACTaGCGAAGATTTGCCCTGATG | + |
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Preference number: 2 (lower is better) Translates to: RICDDCIKICSLPPGRLRFSKPY*RRFALM Trigger: CATCAGGGCAAATCTTCGTCAGTATGGCTTAGAGAA...TCTAAGCCTTCCTGGAGGAAGGGAACATATTTTGATGCAATCATCACAGATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215041.2 ENSMUST00000215595.2 |
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| 3UTR CAA 90 bp | ATTGCTCCAGCCCCATCCCTCTATAGACATGCTCTTAACATGTACTaGCTGACTACAAAATGCACACTCCATCTCTTCCATATTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: IAPAPSLYRHALNMY*LTTKCTLHLFHIVF Trigger: AAAGACAATATGGAAGAGATGGAGTGTGCATTTTGTAGTCAGCAAGTACATGTTAAGAGCATGTCTATAGAGGGATGGGGCTGGAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR CAA 90 bp | TGGTGTTTTGCCAGCATATATATCTGTGTATGGGTGTCAGAAACTTaGGAACTAGAGTTACAGATAGGTGTGAGCTGCCATGTGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: WCFASIYICVWVSET*ELELQIGVSCHVNA Trigger: AGCATTCACATGGCAGCTCACACCTATCTGTAACTCTAGTTCCAAAGTTTCTGACACCCATACACAGATATATATGCTGGCAAAACACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCATCCCTCTATAGACATGCTCTTAACATGTACTTGCTGACTACAAAATGCACCTCATACATTGAGTaGTCATATTGTCAAACGTGG | + |
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Preference number: 2 (lower is better) Translates to: APSLYRHALNMYLLTTKCTSYIE*SYCQTW Trigger: CCACGTTTGACAATATGATCACTCAATGTATGAGGT...GCATTTTGTAGTCAGCAAGTACATGTTAAGAGCATGTCTATAGAGGGATGGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCCATAGTGAGAGTTTTGTTTGATTTCTTTTGGTGGGAGAGGCTACAAGGGTTAACATGTACTTGCTaGCTACAAAATGCACACTCC | + |
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Preference number: 2 (lower is better) Translates to: ASIVRVLFDFFWWERLQGLTCTC*LQNAHS Trigger: GGAGTGTGCATTTTGTAGTCAGCAAGTACATGTTAA...CCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTATGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCCATAGTGAGAGTTTTGTTTGATTTCTTTTGGTGGGAGAGGCTACAAGGGCTCTCTTTGTCCATCTaGAATCCATCTGCCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: ASIVRVLFDFFWWERLQGLSLSI*NPSAKI Trigger: TATTTTGGCAGATGGATTGCAGATGGACAAAGAGAG...CCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTATGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGATGATTGCATCAAAATATGTTCCCTTCCTCCAGGAAGGCTTAGACGCATCTTCTCTGATACCATATaGAGGATCTGTGATGATTGC | + |
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Preference number: 2 (lower is better) Translates to: CDDCIKICSLPPGRLRRIFSDTI*RICDDC Trigger: GCAATCATCACAGATCCTCCATATGGTATCAGAGAA...GATGCGTCTAAGCCTTCCTGGAGGAAGGGAACATATTTTGATGCAATCATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215041.2 ENSMUST00000215595.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGAGAGTTTTGTTTGATTTCTTTTGGTGGGAGAGGCTACAAGGGCAGACAAAGATGACAAGTTCTTaGCCAGGGTTGAAGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: IVRVLFDFFWWERLQGQTKMTSS*PGLKGI Trigger: AATTCCCTTCAACCCTGGCCAAGAACTTGTCATCTT...TGTCTGCCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCAAAGCCTTTTTATAAAACGCTCCTTCTTTCCTGATTGTCAGCATCAGAGTTTCTCTAAGCCATACTaGCGAAGATTTGCCCTGATG | + |
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Preference number: 2 (lower is better) Translates to: IQSLFIKRSFFPDCQHQSFSKPY*RRFALM Trigger: CATCAGGGCAAATCTTCGTCAGTATGGCTTAGAGAA...ACTCTGATGCTGACAATCAGGAAAGAAGGAGCGTTTTATAAAAAGGCTTTGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215595.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGAGAGTTTTGTTTGATTTCTTTTGGTGGGAGAGGCTACAAGGGCAGACACATAGTCCTCCAAAATaGAGAATACATGCTGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: IVRVLFDFFWWERLQGQTHSPPK*RIHAVV Trigger: AACCACAGCATGTATTCTCCATTTTGGAGGACTATG...TGTCTGCCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGATGATTGCATCAAAATATGTTCCCTTCCTCCAGGAAGGCTTAGACGCATCAGGATCTGTGATGATTaGATCAAAATATGTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: CDDCIKICSLPPGRLRRIRICDD*IKICSL Trigger: AAGGGAACATATTTTGATGCAATCATCACAGATCCT...GATGCGTCTAAGCCTTCCTGGAGGAAGGGAACATATTTTGATGCAATCATCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215041.2 ENSMUST00000215595.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCAAAGCCTTTTTATAAAACGCTCCTTCTTTCCTGATTGTCAGCATCAGAGTAGGAGGCCACCCATCTaGCAAAATAAATATTATGTG | + |
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Preference number: 2 (lower is better) Translates to: IQSLFIKRSFFPDCQHQSRRPPI*QNKYYV Trigger: CACATAATATTTATTTTGGCAGATGGGTGGCCTCCT...ACTCTGATGCTGACAATCAGGAAAGAAGGAGCGTTTTATAAAAAGGCTTTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215595.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAAGCCTTTTTATAAAACGCTCCTTCTTTCCTGATTGTCAGCATCAGAGTCATAGTCCTCCAAAATaGAGAATACATGCTGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: IQSLFIKRSFFPDCQHQSHSPPK*RIHAVV Trigger: AACCACAGCATGTATTCTCCATTTTGGAGGACTATG...ACTCTGATGCTGACAATCAGGAAAGAAGGAGCGTTTTATAAAAAGGCTTTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215595.2 |
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| 3UTR CCA 72 bp | ACACCTTCAGAAGCACAAGGGCCCTCGTGGAGGTCTTaGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: TPSEAQGPSWRS*GWILHSSQPLG Trigger: ACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTCTGAAGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR GCA 72 bp | GTCTGTCCCACACACATATGCACCAAAGTGAGCAGATaGTATAAGGAGGCCACCTGTTCCAACAAAGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: VCPTHICTKVSR*YKEATCSNKGV Trigger: GACCCCTTTGTTGGAACAGGTGGCCTCCTTATAGCATCTGCTCACTTTGGTGCATATGTGTGTGGGACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR TCA 72 bp | ATGAAACCCAATGCCTTTGCGTGGCCGTCAAGGACTTaGGCTGCTGTGCCTGCTTTTAAATGTAACTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: MKPNAFAWPSRT*AAVPAFKCNFL Trigger: GAGAAAGTTACATTTAAAAGCAGGCACAGCAGCTCAAGTCCTTGACGGCCACGCAAAGGCATTGGGTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR GCA 72 bp | TCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTaGATGGCCACTGTTATGACTAATATGGGATTTATG | + |
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Preference number: 3 (lower is better) Translates to: SPQFSALRFPCL*MATVMTNMGFM Trigger: CATAAATCCCATATTAGTCATAACAGTGGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR CCA 72 bp | GCTTCCATAGTGAGAGTTTTGTTTGATTTCTTTTGGTaGGAGAGGCTACAAGGGCAGACAGCAGATATGGTG | + |
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Preference number: 3 (lower is better) Translates to: ASIVRVLFDFFW*ERLQGQTADMV Trigger: CACCATATCTGCTGTCTGCCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTATGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR CCA 72 bp | GCAGCTTCCATAGTGAGAGTTTTGTTTGATTTCTTTTaGTGGGAGAGGCTACAAGGGCAGACAGCAGATATG | + |
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Preference number: 3 (lower is better) Translates to: AASIVRVLFDFF*WERLQGQTADM Trigger: CATATCTGCTGTCTGCCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTATGGAAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR GCA 72 bp | GAAACTTTGGAACTAGAGTTACAGATAGGTGTGAGCTaGCATGTGAATGCTGGGAATTGGATTCGGGTCTTA | + |
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Preference number: 3 (lower is better) Translates to: ETLELELQIGVS*HVNAGNWIRVL Trigger: TAAGACCCGAATCCAATTCCCAGCATTCACATGGCAGCTCACACCTATCTGTAACTCTAGTTCCAAAGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTCCATAGTGAGAGTTTTGTTTGATTTCTTTTGGTGGGAGAGGCTACAAGGGAGTTCTTGGCCAGGGTaGAAGGGAATTTTTCTTATT | + |
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Preference number: 3 (lower is better) Translates to: ASIVRVLFDFFWWERLQGSSWPG*KGIFLI Trigger: AATAAGAAAAATTCCCTTCAACCCTGGCCAAGAACT...CCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTATGGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR GCA 72 bp | TACTTACTTATTTATATTTTAGGGTCACTGGTGTTTTaGCAGCATATATATCTGTGTATGGGTGTCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: YLLIYILGSLVF*QHIYLCMGVRN Trigger: GTTTCTGACACCCATACACAGATATATATGCTGGCAAAACACCAGTGACCCTAAAATATAAATAAGTAAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| 3UTR CAA 72 bp | GACACCTTCAGAAGCACAAGGGCCCTCGTGGAGGTCTaGGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: DTFRSTRALVEV*GLDSPQFSALR Trigger: CCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTCTGAAGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR TCA 90 bp | GAAGCACAAGGGCCCTCGTGGAGGTCTTGGGGTTGGATTCTCCACAGTTCTCAGATCACTCAGCAGGTGTaGATACTTGTCCCGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EAQGPSWRSWGWILHSSQITQQV*ILVPVL Trigger: GAGAACCGGGACAAGTATTCACACCTGCTGAGTGAT...CTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR GCA 90 bp | TGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTGCATGGCCACTGAAGCGGAACTCCAGATaGTCCTGTGCCATGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: WILHSSQPLGFLASAWPLKRNSR*SCAMSK Trigger: CTTGCTCATGGCACAGGAGCATCTGGAGTTCCGCTT...CAGTGGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR TCA 90 bp | TCGTGGAGGTCTTGGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTTCACCTTTTCCATGGTaGTCAGGCGCCTTGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SWRSWGWILHSSQPLGFLSPFPW*SGALLC Trigger: ACACAGCAAGGCGCCTGATCACCATGGAAAAGGTGA...AAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR TCA 90 bp | GAAGCACAAGGGCCCTCGTGGAGGTCTTGGGGTTGGATTCTCCACAGTTCTCAGTCGGGAGATTTTCCATaGCCCCATAGTTCAAATATA | + |
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Preference number: 4 (lower is better) Translates to: EAQGPSWRSWGWILHSSQSGDFP*PHSSNI Trigger: TATATTTGAACTATGGGGTCATGGAAAATCTCCCGA...CTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR GCA 90 bp | GAAGCACAAGGGCCCTCGTGGAGGTCTTGGGGTTGGATTCTCCACAGTTCTCAGCTCTCTTTGTCCATCTaGAATCCATCTGCCAAAATA | + |
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Preference number: 4 (lower is better) Translates to: EAQGPSWRSWGWILHSSQLSLSI*NPSAKI Trigger: TATTTTGGCAGATGGATTGCAGATGGACAAAGAGAG...CTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGAGGGCCCTTGTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR TCA 90 bp | ATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTGCATGGCCACTGTTATGGTACGGCAGAAAATaGTCACTCAGCAGGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: ILHSSQPLGFLASAWPLLWYGRK*SLSRCE Trigger: TTCACACCTGCTGAGTGATCATTTTCTGCCGTACCA...TAACAGTGGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| 3UTR CAA 72 bp | ACAGATAGGTGTGAGCTGCCATGTGAATGCTGGGAATaGGATTCGGGTCTTATGGGAAAATCGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TDRCELPCECWE*DSGLMGKSSVL Trigger: GAGCACTGACGATTTTCCCATAAGACCCGAATCCAATTCCCAGCATTCACATGGCAGCTCACACCTATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| CDS-3UTR TCA 90 bp | ATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTGCATGGCCACTGTTATTCTCTAAGCCATACTaGCGAAGATTTGCCCTGATG | + |
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Preference number: 4 (lower is better) Translates to: ILHSSQPLGFLASAWPLLFSKPY*RRFALM Trigger: CATCAGGGCAAATCTTCGTCAGTATGGCTTAGAGAA...TAACAGTGGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR GCA 90 bp | AGGATCTGTGATGATTGCATCAAAATATGTTCCCTTCCTCCAGGAAGGCTTAGAAAGCGGAACTCCAGATaGTCCTGTGCCATGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: RICDDCIKICSLPPGRLRKRNSR*SCAMSK Trigger: CTTGCTCATGGCACAGGAGCATCTGGAGTTCCGCTT...TCTAAGCCTTCCTGGAGGAAGGGAACATATTTTGATGCAATCATCACAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215595.2 |
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| CDS-3UTR CCA 90 bp | TCGTGGAGGTCTTGGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTCATAGTCCTCCAAAATaGAGAATACATGCTGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SWRSWGWILHSSQPLGFLHSPPK*RIHAVV Trigger: AACCACAGCATGTATTCTCCATTTTGGAGGACTATG...AAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR CCA 90 bp | TTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTGCATGGCCACTTTCTCTGATACCATATaGAGGATCTGTGATGATTGC | + |
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Preference number: 4 (lower is better) Translates to: LDSPQFSALRFPCLCMATFSDTI*RICDDC Trigger: GCAATCATCACAGATCCTCCATATGGTATCAGAGAA...AGTGGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR GCA 90 bp | CATGCTCTTAACATGTACTTGCTGACTACAAAATGCACACTCCATCTCTTCCATAAGCGGAACTCCAGATaGTCCTGTGCCATGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: HALNMYLLTTKCTLHLFHKRNSR*SCAMSK Trigger: CTTGCTCATGGCACAGGAGCATCTGGAGTTCCGCTT...ATGGAAGAGATGGAGTGTGCATTTTGTAGTCAGCAAGTACATGTTAAGAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| CDS-3UTR GCA 90 bp | ATCTGTGATGATTGCATCAAAATATGTTCCCTTCCTCCAGGAAGGCTTAGACGCCAGAACCTTATCCATTaGTTAGAGGGACCTTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ICDDCIKICSLPPGRLRRQNLIH*LEGPLR Trigger: TCTCAAAGGTCCCTCTAAGCAATGGATAAGGTTCTG...GCGTCTAAGCCTTCCTGGAGGAAGGGAACATATTTTGATGCAATCATCACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215041.2 |
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| 3UTR CAA 72 bp | GCCAGCATATATATCTGTGTATGGGTGTCAGAAACTTaGGAACTAGAGTTACAGATAGGTGTGAGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ASIYICVWVSET*ELELQIGVSCH Trigger: ATGGCAGCTCACACCTATCTGTAACTCTAGTTCCAAAGTTTCTGACACCCATACACAGATATATATGCTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| CDS-3UTR GCA 90 bp | ATAGTGAGAGTTTTGTTTGATTTCTTTTGGTGGGAGAGGCTACAAGGGCAGACATATGTCGAATCTGAATaGAGATATGGAACTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: IVRVLFDFFWWERLQGQTYVESE*RYGTWH Trigger: GTGCCAAGTTCCATATCTGCATTCAGATTCGACATA...TGTCTGCCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| CDS-3UTR TCA 90 bp | TCATATGCACAAATTCCCATCCAAAGCCTTTTTATAAAACGCTCCTTCTTTCCTAGGCTTAGACGCATCTaGAACCAAGACATCAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: SYAQIPIQSLFIKRSFFPRLRRI*NQDIKV Trigger: TACCTTGATGTCTTGGTTTCAGATGCGTCTAAGCCT...AGGAAAGAAGGAGCGTTTTATAAAAAGGCTTTGGATGGGAATTTGTGCATATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR GCA 90 bp | ATCCAAAGCCTTTTTATAAAACGCTCCTTCTTTCCTGATTGTCAGCATCAGAGTTATGTCGAATCTGAATaGAGATATGGAACTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: IQSLFIKRSFFPDCQHQSYVESE*RYGTWH Trigger: GTGCCAAGTTCCATATCTGCATTCAGATTCGACATA...ACTCTGATGCTGACAATCAGGAAAGAAGGAGCGTTTTATAAAAAGGCTTTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215595.2 |
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| CDS-3UTR GCA 90 bp | ATCATATGCACAAATTCCCATCCAAAGCCTTTTTATAAAACGCTCCTTCTTTCCTATGTCGAATCTGAATaGAGATATGGAACCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: IICTNSHPKPFYKTLLLSYVESE*RYGTIF Trigger: GAAGATGGTTCCATATCTGCATTCAGATTCGACATA...GGAAAGAAGGAGCGTTTTATAAAAAGGCTTTGGATGGGAATTTGTGCATATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR GCA 90 bp | TATTTCCATGATGGACATTACGTAGACTCAGCAAAGTTTTTCCTTCAAGAAAACAGGATCTGTGATGATTaGATCAAAATATGTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: YFHDGHYVDSAKFFLQENRICDD*IKICSL Trigger: AAGGGAACATATTTTGATGCAATCATCACAGATCCT...GTTTTCTTGAAGGAAAAACTTTGCTGAGTCTACGTAATGTCCATCATGGAAATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR CAA 90 bp | TTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTGCCTCTGCATGGCCACTAGCAGGTGTGAATACTaGTCCCGGTTCTCAAATTCC | + |
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Preference number: 5 (lower is better) Translates to: LDSPQFSALRFPCLCMATSRCEY*SRFSNS Trigger: GGAATTTGAGAACCGGGACAAGTATTCACACCTGCT...AGTGGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR CAA 90 bp | TCGTGGAGGTCTTGGGGTTGGATTCTCCACAGTTCTCAGCCCTTAGGTTTCCTTAGTTCAAATATAGACTaGGCACACACAGTCCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: SWRSWGWILHSSQPLGFLSSNID*AHTVRF Trigger: GAAACGGACTGTGTGTGCCAAGTCTATATTTGAACT...AAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCAACCCCAAGACCTCCACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR CAA 90 bp | ATAGTGAGAGTTTTGTTTGATTTCTTTTGGTGGGAGAGGCTACAAGGGCAGACAATGCAGATATGGAACTaGGCACACACAGTCCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: IVRVLFDFFWWERLQGQTMQIWN*AHTVRF Trigger: GAAACGGACTGTGTGTGCCAAGTTCCATATCTGCAT...TGTCTGCCCTTGTAGCCTCTCCCACCAAAAGAAATCAAACAAAACTCTCACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216790.2 |
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| CDS-3UTR CAA 90 bp | AGGATCTGTGATGATTGCATCAAAATATGTTCCCTTCCTCCAGGAAGGCTTAGACCAGAACCTTATCCATaGCTTAGAGGGACCTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: RICDDCIKICSLPPGRLRPEPYP*LRGTFE Trigger: CTCAAAGGTCCCTCTAAGCAATGGATAAGGTTCTGG...TCTAAGCCTTCCTGGAGGAAGGGAACATATTTTGATGCAATCATCACAGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215041.2 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGCCTTTTTATAAAACGCTCCTTCTTTCCTGATTGTCAGCATCAGAGTAGCTTCTGTTCACAGTaGCTAATGAGTCTCAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: IQSLFIKRSFFPDCQHQSSFCSQ*LMSLRQ Trigger: TTGCCTGAGACTCATTAGCAACTGTGAACAGAAGCT...ACTCTGATGCTGACAATCAGGAAAGAAGGAGCGTTTTATAAAAAGGCTTTGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019927.7 |
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| CDS-3UTR CAA 90 bp | ATCATATGCACAAATTCCCATCCAAAGCCTTTTTATAAAACGCTCCTTCTTTCCATGCAGATATGGAACTaGGCACACACAGTCCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: IICTNSHPKPFYKTLLLSMQIWN*AHTVRF Trigger: GAAACGGACTGTGTGTGCCAAGTTCCATATCTGCAT...GGAAAGAAGGAGCGTTTTATAAAAAGGCTTTGGATGGGAATTTGTGCATATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215595.2 |
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| CDS TCA 72 bp | TTTCCGGTAAGCGGAACTCCAGATGCTCCTGTGCCATaGGCAAGAGATAGCGATTCAAGGAGCCCGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: FPVSGTPDAPVP*ARDSDSRSPAA Trigger: CGCTGCCGGGCTCCTTGAATCGCTATCTCTTGCTCATGGCACAGGAGCATCTGGAGTTCCGCTTACCGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019927.7 ENSMUST00000215595.2 ENSMUST00000216790.2 |
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| CDS GCA 72 bp | GCTGTCCTGTGCTTCCTTAACCAGAACCTTATCCATTaGTTAGAGGGACCTTTGAGAAGACTCAACTTACAG | + |
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Preference number: 6 (lower is better) Translates to: AVLCFLNQNLIH*LEGPLRRLNLQ Trigger: CTGTAAGTTGAGTCTTCTCAAAGGTCCCTCTAAGCAATGGATAAGGTTCTGGTTAAGGAAGCACAGGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215041.2 |
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| CDS GCA 72 bp | AGAGGGACCTTTGAGAAGACTCAACTTACAGAACACTaGTGTTCCAACAAAGGGGTCAAAGACAAGATCATT | + |
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Preference number: 6 (lower is better) Translates to: RGTFEKTQLTEH*CSNKGVKDKII Trigger: AATGATCTTGTCTTTGACCCCTTTGTTGGAACAGCAGTGTTCTGTAAGTTGAGTCTTCTCAAAGGTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215041.2 |
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