Pregenerated sensors for TRMT10C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044763Ensembl transcript IDs: ENSMUST00000059052.9
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCACCAGAACTAGAGTTACAGGGGTTGCAAGCCACCCAAAGTGGTaGTGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: PTRTRVTGVASHPKW*WELNLSSLQESTET Trigger: TGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCTGTAACTCTAGTTCTGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAGCCTGTTACTGTCATGGCAGGAAGGATGTTGGCAGGTACAGTGCTGGGAGGCTACTGGAGACGTaGCTTCCCTCCCCCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: VLACYCHGRKDVGRYSAGRLLET*LPSPKT Trigger: TGTTTTGGGGGAGGGAAGGCACGTCTCCAGTAGCCT...CCCAGCACTGTACCTGCCAACATCCTTCCTGCCATGACAGTAACAGGCTAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR-3UTR TCA 90 bp | AGAACTAGAGTTACAGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATCGTCTAGTCTGGCCTTaGTGGAGGACAAGGCTACAT | + |
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Preference number: 2 (lower is better) Translates to: RTRVTGVASHPKWCWELNRLVWP*WRTRLH Trigger: ATGTAGCCTTGTCCTCCATCAAGGCCAGACTAGACG...ATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCTGTAACTCTAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACATTTGGGAAGTGGAAGTaGAGAATTAGGGTTGAACCT | + |
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Preference number: 2 (lower is better) Translates to: RGCKPPKVVLGTEFKFSTFGKWK*RIRVEP Trigger: AGGTTCAACCCTAATTCTCCACTTCCACTTCCCAAA...TGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR CCA 72 bp | TTCAGGCCTGTACTCCCATCATTTGGGAAGTGGAAGTaGAGAATTAGGGTTGAACCTGGCATAGGCTACTGG | + |
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Preference number: 3 (lower is better) Translates to: FRPVLPSFGKWK*RIRVEPGIGYW Trigger: CCAGTAGCCTATGCCAGGTTCAACCCTAATTCTCCACTTCCACTTCCCAAATGATGGGAGTACAGGCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR-3UTR CAA 90 bp | ATATGCCTGCATGAGCTGTGTTTACCACATTTCATACAGGTGCCCTTAGAGTCCACGTCTAGTCTGGCCTaGATGGAGGACAAGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: ICLHELCLPHFIQVPLESTSSLA*MEDKAT Trigger: TGTAGCCTTGTCCTCCATCAAGGCCAGACTAGACGT...GGACTCTAAGGGCACCTGTATGAAATGTGGTAAACACAGCTCATGCAGGCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR-3UTR CAA 90 bp | GTGTTAGCCTGTTACTGTCATGGCAGGAAGGATGTTGGCAGGTACAGTGCTGGGGGAATAACTACATTCTaGTCACCATACTTTCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: VLACYCHGRKDVGRYSAGGITTF*SPYFQP Trigger: AGGCTGAAAGTATGGTGACAAGAATGTAGTTATTCC...CCCAGCACTGTACCTGCCAACATCCTTCCTGCCATGACAGTAACAGGCTAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR GCA 72 bp | ACTAGAGTTACAGGGGTTGCAAGCCACCCAAAGTGGTaGTGGGAACTGAATTTAAGTTCTCTACAAGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: TRVTGVASHPKW*WELNLSSLQES Trigger: GGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCTGTAACTCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR CCA 72 bp | AGAGTTACAGGGGTTGCAAGCCACCCAAAGTGGTGCTaGGAACTGAATTTAAGTTCTCTACAAGAGTCCACT | + |
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Preference number: 3 (lower is better) Translates to: RVTGVASHPKWC*ELNLSSLQEST Trigger: AGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCTGTAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR CCA 72 bp | AGAACTAGAGTTACAGGGGTTGCAAGCCACCCAAAGTaGTGCTGGGAACTGAATTTAAGTTCTCTACAAGAG | + |
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Preference number: 3 (lower is better) Translates to: RTRVTGVASHPK*CWELNLSSLQE Trigger: CTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCTGTAACTCTAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR-3UTR CAA 90 bp | TGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTGAGACATCATTCTGGTCCCTGTACTCCCATCATTaGGGAAGTGGAAGTGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: WELNLSSLQESTETSFWSLYSHH*GSGSGE Trigger: TTCTCCACTTCCACTTCCCAAATGATGGGAGTACAG...GGACCAGAATGATGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR TCA 72 bp | CTGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTaGGACATCATTCTGGTCCAGACACATTTTCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: LGTEFKFSTRVH*DIILVQTHFLS Trigger: GGACAGAAAATGTGTCTGGACCAGAATGATGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR TCA 72 bp | AACTCTTATAAAGGACAACATTTAATTAGGGCTGGCTaGCAGTTCCAAAGTGTTAGCCTGTTACTGTCATGG | + |
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Preference number: 3 (lower is better) Translates to: NSYKGQHLIRAG*QFQSVSLLLSW Trigger: CCATGACAGTAACAGGCTAACACTTTGGAACTGTCAGCCAGCCCTAATTAAATGTTGTCCTTTATAAGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR GCA 72 bp | TTAATGTCAGCTTTTGTATTCATGTGTGTATATGCCTaGATGAGCTGTGTTTACCACATTTCATACAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: LMSAFVFMCVYA*MSCVYHISYRC Trigger: GCACCTGTATGAAATGTGGTAAACACAGCTCATGCAGGCATATACACACATGAATACAAAAGCTGACATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR TCA 90 bp | GTGTTAGCCTGTTACTGTCATGGCAGGAAGGATGTTGGCAGGTACAGTGCTGGGTCCTGGGAACAAACTTaGGAGCCTCTTCCCAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: VLACYCHGRKDVGRYSAGSWEQT*EPLPSY Trigger: GTAACTGGGAAGAGGCTCTCAAGTTTGTTCCCAGGA...CCCAGCACTGTACCTGCCAACATCCTTCCTGCCATGACAGTAACAGGCTAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR GCA 90 bp | AGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACACAACCTGGCCCTTTTTaGTTCTTCCCTGGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: RGCKPPKVVLGTEFKFSTQPGPF*FFPGLR Trigger: GCGGAGGCCAGGGAAGAAGCAAAAAGGGCCAGGTTG...TGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR TCA 90 bp | GTGTTAGCCTGTTACTGTCATGGCAGGAAGGATGTTGGCAGGTACAGTGCTGGGTTCCTAACAAGTTCCTaGGATTGCTCAGAAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLACYCHGRKDVGRYSAGFLTSS*DCSETS Trigger: AGAGGTTTCTGAGCAATCTCAGGAACTTGTTAGGAA...CCCAGCACTGTACCTGCCAACATCCTTCCTGCCATGACAGTAACAGGCTAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR GCA 90 bp | AGAACTAGAGTTACAGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATCTGCTCAGGAGGGGATaGACTGTCCTTATTATGACA | + |
|
Preference number: 4 (lower is better) Translates to: RTRVTGVASHPKWCWELNLLRRG*TVLIMT Trigger: TGTCATAATAAGGACAGTGCATCCCCTCCTGAGCAG...ATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCTGTAACTCTAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR TCA 90 bp | AGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACAAACCCAGTGCAATGTTaGTCTGTCGATCCCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: RGCKPPKVVLGTEFKFSTNPVQC*SVDPIV Trigger: GACTATGGGATCGACAGATCAACATTGCACTGGGTT...TGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTGAGACATGGTCTCTAGCAACCTaGCCCTTTTTGCTTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PKWCWELNLSSLQESTETWSLAT*PFLLLP Trigger: GGGAAGAAGCAAAAAGGGCCAGGTTGCTAGAGACCA...TGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CCA 90 bp | AGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACATTAACCGTTTGGCCTTaGCTAAGGATGTTCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RGCKPPKVVLGTEFKFSTLTVWP*LRMFLS Trigger: AGACAGGAACATCCTTAGCCAAGGCCAAACGGTTAA...TGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTGAGACAACCCTTCCAACCCAGTaGAATGTTGATCTGTCGATC | + |
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Preference number: 4 (lower is better) Translates to: PKWCWELNLSSLQESTETTLPTQ*NVDLSI Trigger: GATCGACAGATCAACATTGCACTGGGTTGGAAGGGT...TGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CCA 90 bp | GTTCTCTACAAGAGTCCACTGAGACATCATTCTGGTCCAGACACATTTTCTGTCTTTTTGCTTCTTCCCTaGCCTCCGCTTTCATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VLYKSPLRHHSGPDTFSVFLLLP*PPLSSP Trigger: AGGAGATGAAAGCGGAGGCCAGGGAAGAAGCAAAAA...GACAGAAAATGTGTCTGGACCAGAATGATGTCTCAGTGGACTCTTGTAGAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR TCA 90 bp | ATATGCCTGCATGAGCTGTGTTTACCACATTTCATACAGGTGCCCTTAGAGTCCGCACTGTCCTTATTATaGCAAGACAAAGAAGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ICLHELCLPHFIQVPLESALSLL*QDKEGA Trigger: AGCACCTTCTTTGTCTTGTCATAATAAGGACAGTGC...GGACTCTAAGGGCACCTGTATGAAATGTGGTAAACACAGCTCATGCAGGCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR GCA 90 bp | AGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACAACAAGACAAAGAAGGTaGTTTGGAGGACATGTATCT | + |
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Preference number: 4 (lower is better) Translates to: RGCKPPKVVLGTEFKFSTTRQRR*FGGHVS Trigger: AGATACATGTCCTCCAAAGCACCTTCTTTGTCTTGT...TGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| 3UTR CAA 72 bp | TTCAAAGTTTTGCTGATACATACGTCTAGTCTGGCCTaGATGGAGGACAAGGCTACATGGAAATCCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FKVLLIHTSSLA*MEDKATWKSCC Trigger: GCAACAGGATTTCCATGTAGCCTTGTCCTCCATCAAGGCCAGACTAGACGTATGTATCAGCAAAACTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTGAGACAAGAAACATGAAGTCTTaGTGTTGTTCTTCTGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: PKWCWELNLSSLQESTETRNMKS*CCSSAV Trigger: CACCGCAGAAGAACAACAGCAAGACTTCATGTTTCT...TGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR TCA 90 bp | GTTCTCTACAAGAGTCCACTGAGACATCATTCTGGTCCAGACACATTTTCTGTCGAAACACCATCTTCTTaGATGCTCGACTTCATTGTA | + |
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Preference number: 4 (lower is better) Translates to: VLYKSPLRHHSGPDTFSVETPSS*MLDFIV Trigger: TACAATGAAGTCGAGCATTCAAGAAGATGGTGTTTC...GACAGAAAATGTGTCTGGACCAGAATGATGTCTCAGTGGACTCTTGTAGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CCA 90 bp | TGGTGCTGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTGAGACATCATTCCCTATGAAAGGTATATaGCACCAGACATCTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: WCWELNLSSLQESTETSFPMKGI*HQTSGK Trigger: TTTGCCAGATGTCTGGTGCCATATACCTTTCATAGG...GAATGATGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR TCA 90 bp | CCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTGAGACAATAGTCGAAGAAACATaGAGTCTTGCTGTTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PKWCWELNLSSLQESTETIVEET*SLAVVL Trigger: AAGAACAACAGCAAGACTTCATGTTTCTTCGACTAT...TGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACAAGAGTCCACTGAGACATTCAGTAATATGTTCTaGTACTTCTTTGCCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PKWCWELNLSSLQESTETFSNMF*YFFAKQ Trigger: TTGCTTGGCAAAGAAGTACCAGAACATATTACTGAA...TGTCTCAGTGGACTCTTGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR GCA 90 bp | AATAACTACATTCTTGTCACCATACTTTCAGCCTGTTTTCTTCTTTCACCATACGAGGACATGTATCTCTaGAGAACTCCTGAATATAAA | + |
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Preference number: 4 (lower is better) Translates to: NNYILVTILSACFLLSPYEDMYL*RTPEYK Trigger: TTTATATTCAGGAGTTCTGCAGAGATACATGTCCTC...GTATGGTGAAAGAAGAAAACAGGCTGAAAGTATGGTGACAAGAATGTAGTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CAA 90 bp | AGAACTAGAGTTACAGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATGCAACCTGGCCCTTTTaGCTTCTTCCCTGGCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: RTRVTGVASHPKWCWELNATWPF*LLPWPP Trigger: CGGAGGCCAGGGAAGAAGCAAAAAGGGCCAGGTTGC...ATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCTGTAACTCTAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS TCA 90 bp | CCATCCAATTCTAGCTGCTCAGGAGGGGATGCACTGTCCTTATTATaGCAAGACAAAGAAGGTGCTTTGGAGGACATGTATCTCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PSNSSCSGGDALSLL*QDKEGALEDMYLCR Trigger: TCTGCAGAGATACATGTCCTCCAAAGCACCTTCTTTGTCTTGTCATAATAAGGACAGTGCATCCCCTCCTGAGCAGCTAGAATTGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS GCA 90 bp | GCAATGTTGATCTGTCGATCCCATAGTCGAAGAAACATGAAGTCTTaGTGTTGTTCTTCTGCGGTGGTCTCTAGCAACCTGGCCCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: AMLICRSHSRRNMKS*CCSSAVVSSNLALF Trigger: AAAAAGGGCCAGGTTGCTAGAGACCACCGCAGAAGAACAACAGCAAGACTTCATGTTTCTTCGACTATGGGATCGACAGATCAACATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CAA 90 bp | AGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACATGTTCTGGTACTTCTTaGCCAAGCAATCTCCACATC | + |
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Preference number: 5 (lower is better) Translates to: RGCKPPKVVLGTEFKFSTCSGTS*PSNLHI Trigger: GATGTGGAGATTGCTTGGCAAAGAAGTACCAGAACA...TGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CCA 90 bp | CTGGTACTTCTTTGCCAAGCAATCTCCACATCTCAATTAGTTCTCTaGTTGAGGCGAGGGAATCTTCATCTTTGTCTGAGACCTCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LVLLCQAISTSQLVL*LRRGNLHLCLRPLK Trigger: TTTCAGAGGTCTCAGACAAAGATGAAGATTCCCTCGCCTCAACCAGAGAACTAATTGAGATGTGGAGATTGCTTGGCAAAGAAGTACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CAA 90 bp | AGGGGTTGCAAGCCACCCAAAGTGGTGCTGGGAACTGAATTTAAGTTCTCTACACAGGAGACTTTTCTGTaGCTGTTAAGAGCAATTTGT | + |
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Preference number: 5 (lower is better) Translates to: RGCKPPKVVLGTEFKFSTQETFL*LLRAIC Trigger: ACAAATTGCTCTTAACAGCAACAGAAAAGTCTCCTG...TGTAGAGAACTTAAATTCAGTTCCCAGCACCACTTTGGGTGGCTTGCAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CAA 90 bp | AATAACTACATTCTTGTCACCATACTTTCAGCCTGTTTTCTTCTTTCACCATACAGGGAATCTTCATCTTaGTCTGAGACCTCTGAAACA | + |
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Preference number: 5 (lower is better) Translates to: NNYILVTILSACFLLSPYRESSS*SETSET Trigger: TGTTTCAGAGGTCTCAGACAAAGATGAAGATTCCCT...GTATGGTGAAAGAAGAAAACAGGCTGAAAGTATGGTGACAAGAATGTAGTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS-3UTR CAA 90 bp | AATAACTACATTCTTGTCACCATACTTTCAGCCTGTTTTCTTCTTTCACCATACAAGGTAGTCATAACATaGGGAGAATCTGCAGTTAAA | + |
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Preference number: 5 (lower is better) Translates to: NNYILVTILSACFLLSPYKVVIT*GESAVK Trigger: TTTAACTGCAGATTCTCCCAATGTTATGACTACCTT...GTATGGTGAAAGAAGAAAACAGGCTGAAAGTATGGTGACAAGAATGTAGTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CCA 72 bp | CTTGCTGTTGTTCTTCTGCGGTGGTCTCTAGCAACCTaGCCCTTTTTGCTTCTTCCCTGGCCTCCGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LAVVLLRWSLAT*PFLLLPWPPLS Trigger: TGAAAGCGGAGGCCAGGGAAGAAGCAAAAAGGGCCAGGTTGCTAGAGACCACCGCAGAAGAACAACAGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 90 bp | TGTCCAAACTGCATAGCCTGGACACCCTTCCAACCCAGTGCAATGTaGATCTGTCGATCCCATAGTCGAAGAAACATGAAGTCTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CPNCIAWTPFQPSAM*ICRSHSRRNMKSCC Trigger: ACAGCAAGACTTCATGTTTCTTCGACTATGGGATCGACAGATCAACATTGCACTGGGTTGGAAGGGTGTCCAGGCTATGCAGTTTGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS TCA 72 bp | TCTAGCTGCTCAGGAGGGGATGCACTGTCCTTATTATaGCAAGACAAAGAAGGTGCTTTGGAGGACATGTAT | + |
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Preference number: 6 (lower is better) Translates to: SSCSGGDALSLL*QDKEGALEDMY Trigger: ATACATGTCCTCCAAAGCACCTTCTTTGTCTTGTCATAATAAGGACAGTGCATCCCCTCCTGAGCAGCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 72 bp | TGCCAAGCAATCTCCACATCTCAATTAGTTCTCTGGTaGAGGCGAGGGAATCTTCATCTTTGTCTGAGACCT | + |
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Preference number: 6 (lower is better) Translates to: CQAISTSQLVLW*RRGNLHLCLRP Trigger: AGGTCTCAGACAAAGATGAAGATTCCCTCGCCTCAACCAGAGAACTAATTGAGATGTGGAGATTGCTTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 90 bp | GTACTTCTTTGCCAAGCAATCTCCACATCTCAATTAGTTCTCTGGTaGAGGCGAGGGAATCTTCATCTTTGTCTGAGACCTCTGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: VLLCQAISTSQLVLW*RRGNLHLCLRPLKH Trigger: GTGTTTCAGAGGTCTCAGACAAAGATGAAGATTCCCTCGCCTCAACCAGAGAACTAATTGAGATGTGGAGATTGCTTGGCAAAGAAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CCA 72 bp | CTTTGCCAAGCAATCTCCACATCTCAATTAGTTCTCTaGTTGAGGCGAGGGAATCTTCATCTTTGTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LCQAISTSQLVL*LRRGNLHLCLR Trigger: TCTCAGACAAAGATGAAGATTCCCTCGCCTCAACCAGAGAACTAATTGAGATGTGGAGATTGCTTGGCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CCA 72 bp | CTAGTGGAAGGCACTCTGTTGCTATGTTTAACCGTTTaGCCTTGGCTAAGGATGTTCCTGTCTGTGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: LVEGTLLLCLTV*PWLRMFLSVYF Trigger: AAAATACACAGACAGGAACATCCTTAGCCAAGGCCAAACGGTTAAACATAGCAACAGAGTGCCTTCCACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 72 bp | TCTAGTGGAAGGCACTCTGTTGCTATGTTTAACCGTTaGGCCTTGGCTAAGGATGTTCCTGTCTGTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: SSGRHSVAMFNR*ALAKDVPVCVF Trigger: AAATACACAGACAGGAACATCCTTAGCCAAGGCCAAACGGTTAAACATAGCAACAGAGTGCCTTCCACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 72 bp | GGAAGGCACTCTGTTGCTATGTTTAACCGTTTGGCCTaGGCTAAGGATGTTCCTGTCTGTGTATTTTTATCA | + |
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Preference number: 6 (lower is better) Translates to: GRHSVAMFNRLA*AKDVPVCVFLS Trigger: TGATAAAAATACACAGACAGGAACATCCTTAGCCAAGGCCAAACGGTTAAACATAGCAACAGAGTGCCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CCA 72 bp | TTCTCTTCCTATGAAAGGTATATGGCACCAGACATCTaGCAAAAGGTCTTAAGAAACGGACAGTCACATTCA | + |
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Preference number: 6 (lower is better) Translates to: FSSYERYMAPDI*QKVLRNGQSHS Trigger: TGAATGTGACTGTCCGTTTCTTAAGACCTTTTGCCAGATGTCTGGTGCCATATACCTTTCATAGGAAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 72 bp | CCCATTGTAAATATTTATCTAGTGGAAGGCACTCTGTaGCTATGTTTAACCGTTTGGCCTTGGCTAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PIVNIYLVEGTL*LCLTVWPWLRM Trigger: CATCCTTAGCCAAGGCCAAACGGTTAAACATAGCAACAGAGTGCCTTCCACTAGATAAATATTTACAATGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 90 bp | ATAAGGGTTTTGAGATCTTCTTCAGTAATATGTTCTGGTACTTCTTaGCCAAGCAATCTCCACATCTCAATTAGTTCTCTGGTTGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: IRVLRSSSVICSGTS*PSNLHISISSLVEA Trigger: CGCCTCAACCAGAGAACTAATTGAGATGTGGAGATTGCTTGGCAAAGAAGTACCAGAACATATTACTGAAGAAGATCTCAAAACCCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 90 bp | TACCAATTTCCCATTGTAAATATTTATCTAGTGGAAGGCACTCTGTaGCTATGTTTAACCGTTTGGCCTTGGCTAAGGATGTTCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: YQFPIVNIYLVEGTL*LCLTVWPWLRMFLS Trigger: AGACAGGAACATCCTTAGCCAAGGCCAAACGGTTAAACATAGCAACAGAGTGCCTTCCACTAGATAAATATTTACAATGGGAAATTGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 90 bp | TTATCTAGTGGAAGGCACTCTGTTGCTATGTTTAACCGTTTGGCCTaGGCTAAGGATGTTCCTGTCTGTGTATTTTTATCAACAAATGAT | + |
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Preference number: 6 (lower is better) Translates to: LSSGRHSVAMFNRLA*AKDVPVCVFLSTND Trigger: ATCATTTGTTGATAAAAATACACAGACAGGAACATCCTTAGCCAAGGCCAAACGGTTAAACATAGCAACAGAGTGCCTTCCACTAGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 72 bp | TTTTCCTTCCCATACAGATACCGTAAGTATTTCTTCTaGGCTGATTTAGAGGCACATTCCATAAGGGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: FSFPYRYRKYFF*ADLEAHSIRVL Trigger: CAAAACCCTTATGGAATGTGCCTCTAAATCAGCCAAGAAGAAATACTTACGGTATCTGTATGGGAAGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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| CDS CAA 90 bp | AAATATTTATCTAGTGGAAGGCACTCTGTTGCTATGTTTAACCGTTaGGCCTTGGCTAAGGATGTTCCTGTCTGTGTATTTTTATCAACA | + |
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Preference number: 6 (lower is better) Translates to: KYLSSGRHSVAMFNR*ALAKDVPVCVFLST Trigger: TGTTGATAAAAATACACAGACAGGAACATCCTTAGCCAAGGCCAAACGGTTAAACATAGCAACAGAGTGCCTTCCACTAGATAAATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059052.9 |
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