Pregenerated sensors for TRMT10A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004127Ensembl transcript IDs: ENSMUST00000040321.13, ENSMUST00000159481.8, ENSMUST00000159622.8, ENSMUST00000161141.2, ENSMUST00000162864.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCGTGCGAAGGGCTTGTGACCTGAATACTACTCTGCAAACTCTCTaGAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCGG | + |
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Preference number: 1 (lower is better) Translates to: LVRRACDLNTTLQTL*RSPTVQCPLLCLHR Trigger: CCGATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGTAGTATTCAGGTCACAAGCCCTTCGCACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR CCA 90 bp | AAAGTTTTCTTGCAGTCTGAGCATTCTGTAAAGCACCGCACTGCCTaGTTTCTCTTAAGCGAGAGGAGGACAGGGGAAGGTTACTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: KVFLQSEHSVKHRTA*FLLSERRTGEGYCG Trigger: CCCACAGTAACCTTCCCCTGTCCTCCTCTCGCTTAAGAGAAACCAGGCAGTGCGGTGCTTTACAGAATGCTCAGACTGCAAGAAAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 90 bp | CTGTCTTCTTCACACATATTAAGCTCACGGCGCATGCCCTCGAAATaGGCTAGAAAGAGGGAGAAAGACCTCCATGAGCTAGCTCACTCA | + |
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Preference number: 1 (lower is better) Translates to: LSSSHILSSRRMPSK*ARKREKDLHELAHS Trigger: TGAGTGAGCTAGCTCATGGAGGTCTTTCTCCCTCTTTCTAGCTCATTTCGAGGGCATGCGCCGTGAGCTTAATATGTGTGAAGAAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR GCA 90 bp | CTACTCTGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTaGTCTGTCTCCATCGGTTTCCAAACCACTGTTCAATTCCATTTA | + |
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Preference number: 1 (lower is better) Translates to: LLCKLSAEAQQCSAL*SVSIGFQTTVQFHL Trigger: TAAATGGAATTGAACAGTGGTTTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 90 bp | CATTCCGCAAAGAATGCATCAGTCCTGTCATTGTGGATTAAGGCATaGAGGCTAAATGTGATATGGACAGATGTAAACATTATTACATGC | + |
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Preference number: 1 (lower is better) Translates to: HSAKNASVLSLWIKA*RLNVIWTDVNIITC Trigger: GCATGTAATAATGTTTACATCTGTCCATATCACATTTAGCCTTCATGCCTTAATCCACAATGACAGGACTGATGCATTCTTTGCGGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 90 bp | ATCAACAGAGCTTTTGCAATGAGTGAGCTGAAACCATGTGGCACTTaGAATGATTTCCTTCACTTTTATAGGGTCCTCTCCCATATAAAA | + |
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Preference number: 1 (lower is better) Translates to: INRAFAMSELKPCGT*NDFLHFYRVLSHIK Trigger: TTTTATATGGGAGAGGACCCTATAAAAGTGAAGGAAATCATTTCAAGTGCCACATGGTTTCAGCTCACTCATTGCAAAAGCTCTGTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACAAGCACCGCACTGCCTaGTTTCTCTTAAGCGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KERKKVTKSPLPTSHAADKHRTA*FLLSER Trigger: CCTCTCGCTTAAGAGAAACCAGGCAGTGCGGTGCTT...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACAAAGAGAAAAGACCAATaGGAGCCCCTGGAGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: ISPATIPTLEATITVFFTKRKDQ*EPLELH Trigger: GTGGAGCTCCAGGGGCTCTCATTGGTCTTTTCTCTT...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACCGCATGCCCTCGAAATaGGCTAGAAAGAGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: KERKKVTKSPLPTSHAADRMPSK*ARKREK Trigger: TTTCTCCCTCTTTCTAGCTCATTTCGAGGGCATGCG...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACACGCATGCCCTCGAAATaGGCTAGAAAGAGGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ISPATIPTLEATITVFFTRMPSK*ARKREK Trigger: TTTCTCCCTCTTTCTAGCTCATTTCGAGGGCATGCG...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACATGTAAAGCACCGCACTaGCTGGTTTCTCTTAAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: RRGRKSPSPHCLPHTLLTCKAPH*LVSLKR Trigger: TCGCTTAAGAGAAACCAGGCAGTGCGGTGCTTTACA...TGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACAAGTTTTCTTGCAGTCTaGGCATTCTGTAAAGCACCG | + |
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Preference number: 2 (lower is better) Translates to: RRGRKSPSPHCLPHTLLTSFLAV*AFCKAP Trigger: CGGTGCTTTACAGAATGCTCAGACTGCAAGAAAACT...TGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACATTGTCAGGTTGGTTTaGATGTCAGGACGTGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: KERKKVTKSPLPTSHAADIVRLV*MSGRGD Trigger: ATCACCACGTCCTGACATCCAAACCAACCTGACAAT...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACCACTCACTGAGCTCATaGTCTCTGCTGCCATTAATT | + |
|
Preference number: 2 (lower is better) Translates to: KERKKVTKSPLPTSHAADHSLSS*SLLPLI Trigger: AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTG...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACCACACAGGTCAGTTATaGATATCTGCTCCACCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: KERKKVTKSPLPTSHAADHTGQL*ISAPPN Trigger: ATTTGGTGGAGCAGATATTCATAACTGACCTGTGTG...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCTTGTGGATTAAGGCATaGAGGCTAAATGTGATATGG | + |
|
Preference number: 2 (lower is better) Translates to: CKLSAEAQQCSALCSVSILWIKA*RLNVIW Trigger: CCATATCACATTTAGCCTTCATGCCTTAATCCACAA...GATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACACACACAGGTCAGTTATaGATATCTGCTCCACCAAAT | + |
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Preference number: 2 (lower is better) Translates to: ISPATIPTLEATITVFFTHTGQL*ISAPPN Trigger: ATTTGGTGGAGCAGATATTCATAACTGACCTGTGTG...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACATTGTCCAAAAGGAATaGATTGTAGAGCCCAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KERKKVTKSPLPTSHAADIVQKE*IVEPSK Trigger: TTTGCTGGGCTCTACAATTCATTCCTTTTGGACAAT...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACACATGACAAAACACCCTaGCAAAAGGCCAATAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ISPATIPTLEATITVFFTHDKTP*QKANKE Trigger: TTCCTTATTGGCCTTTTGTCAGGGTGTTTTGTCATG...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACCGTGGTGATCACATTTaGCTGTATAAAGGAAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KERKKVTKSPLPTSHAADRGDHI*LYKGKK Trigger: CTTCTTTCCTTTATACAGGCAAATGTGATCACCACG...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACACGTGGTGATCACATTTaGCTGTATAAAGGAAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RRGRKSPSPHCLPHTLLTRGDHI*LYKGKK Trigger: CTTCTTTCCTTTATACAGGCAAATGTGATCACCACG...TGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR CCA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTATTGTCAGGTTGGTTTaGATGTCAGGACGTGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: DLHELAHSLSSWSLLPLIIVRLV*MSGRGD Trigger: ATCACCACGTCCTGACATCCAAACCAACCTGACAAT...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACAAACCATGTGGCACTTaGAATGATTTCCTTCACTTT | + |
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Preference number: 2 (lower is better) Translates to: KERKKVTKSPLPTSHAADKPCGT*NDFLHF Trigger: AAAGTGAAGGAAATCATTTCAAGTGCCACATGGTTT...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR TCA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTATTGTCCAAAAGGAATaGATTGTAGAGCCCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: DLHELAHSLSSWSLLPLIIVQKE*IVEPSK Trigger: TTTGCTGGGCTCTACAATTCATTCCTTTTGGACAAT...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR CCA 72 bp | GAAAGGCCCCACAACCTCGAAAACGGCACCATCAGCTaGAGACCAAGTGTCCAAACACACGGGCCCATGGGG | + |
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Preference number: 3 (lower is better) Translates to: ERPHNLENGTIS*RPSVQTHGPMG Trigger: CCCCATGGGCCCGTGTGTTTGGACACTTGGTCTCCAGCTGATGGTGCCGTTTTCGAGGTTGTGGGGCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR CCA 72 bp | GGTATACAGACCCTCACTGCAGGGGAGGCCTGGCAGTaGGATTGTCAGGTTGGTTTGGATGTCAGGACGTGG | + |
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Preference number: 3 (lower is better) Translates to: GIQTLTAGEAWQ*DCQVGLDVRTW Trigger: CCACGTCCTGACATCCAAACCAACCTGACAATCCCACTGCCAGGCCTCCCCTGCAGTGAGGGTCTGTATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR CCA 72 bp | CACTGCAGGGGAGGCCTGGCAGTGGGATTGTCAGGTTaGTTTGGATGTCAGGACGTGGTGATCACATTTGCC | + |
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Preference number: 3 (lower is better) Translates to: HCRGGLAVGLSG*FGCQDVVITFA Trigger: GGCAAATGTGATCACCACGTCCTGACATCCAAACCAACCTGACAATCCCACTGCCAGGCCTCCCCTGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 72 bp | AGGGTCAGAAGACACGTCCTGAAGGATATGCTCCAGTaGGTGACGAACCGAGGCAGACTCGTATTCCACGTC | + |
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Preference number: 3 (lower is better) Translates to: RVRRHVLKDMLQ*VTNRGRLVFHV Trigger: GACGTGGAATACGAGTCTGCCTCGGTTCGTCACTCACTGGAGCATATCCTTCAGGACGTGTCTTCTGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 72 bp | GGAGCTCCACTGCACTCGTGCGAAGGGCTTGTGACCTaGATACTACTCTGCAAACTCTCTGCAGAAGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: GAPLHSCEGLVT*ILLCKLSAEAQ Trigger: TTGGGCTTCTGCAGAGAGTTTGCAGAGTAGTATTCAGGTCACAAGCCCTTCGCACGAGTGCAGTGGAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR GCA 72 bp | ACTCTGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTaGCCTCTGCTCTGTCTCCATCGGTTTCCAAACCAC | + |
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Preference number: 3 (lower is better) Translates to: TLQTLCRSPTVQ*PLLCLHRFPNH Trigger: GTGGTTTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR GCA 72 bp | AGGGCTTGTGACCTGAATACTACTCTGCAAACTCTCTaGAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: RACDLNTTLQTL*RSPTVQCPLLC Trigger: ACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGTAGTATTCAGGTCACAAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR CCA 72 bp | TTGCAGTCTGAGCATTCTGTAAAGCACCGCACTGCCTaGTTTCTCTTAAGCGAGAGGAGGACAGGGGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LQSEHSVKHRTA*FLLSERRTGEG Trigger: ACCTTCCCCTGTCCTCCTCTCGCTTAAGAGAAACCAGGCAGTGCGGTGCTTTACAGAATGCTCAGACTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACAATGACCCTACCAGGCTaGATTCTGAACTTGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: ISPATIPTLEATITVFFTMTLPG*ILNLQP Trigger: AGGCTGCAAGTTCAGAATCAAGCCTGGTAGGGTCAT...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 72 bp | CAGCGCACACATTGTATCATAAAGAGAAAAGACCAATaGGAGCCCCTGGAGCTCCACTGCACTCGTGCGAAG | + |
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Preference number: 3 (lower is better) Translates to: QRTHCIIKRKDQ*EPLELHCTRAK Trigger: CTTCGCACGAGTGCAGTGGAGCTCCAGGGGCTCTCATTGGTCTTTTCTCTTTATGATACAATGTGTGCGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR GCA 72 bp | AAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTaGTCTGTCTCCATCGGTTTCCAAACCACTGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: KLSAEAQQCSAL*SVSIGFQTTVQ Trigger: TTGAACAGTGGTTTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR GCA 72 bp | ATACTACTCTGCAAACTCTCTGCAGAAGCCCAACAGTaGAGTGCCCTCTGCTCTGTCTCCATCGGTTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: ILLCKLSAEAQQ*SALCSVSIGFQ Trigger: TTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGTAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 72 bp | TCACACATATTAAGCTCACGGCGCATGCCCTCGAAATaGGCTAGAAAGAGGGAGAAAGACCTCCATGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: SHILSSRRMPSK*ARKREKDLHEL Trigger: TAGCTCATGGAGGTCTTTCTCCCTCTTTCTAGCTCATTTCGAGGGCATGCGCCGTGAGCTTAATATGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR CCA 72 bp | CCTGACAAAAGGCCAATAAGGAAGGGAGGGTTATTTTaGTCTAGAGCTCTGAGGAGGTATACAGACCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: PDKRPIRKGGLF*SRALRRYTDPH Trigger: GTGAGGGTCTGTATACCTCCTCAGAGCTCTAGACCAAAATAACCCTCCCTTCCTTATTGGCCTTTTGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR CAA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTCTAGAGAAAGTTTTCTaGCAGTCTGAGCATTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: DLHELAHSLSSWSLLPLILEKVF*QSEHSV Trigger: TACAGAATGCTCAGACTGCAAGAAAACTTTCTCTAG...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 72 bp | GGAGGCACAGGAATAGACTCCATTGTCCAAAAGGAATaGATTGTAGAGCCCAGCAAACAACTGGTAGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: GGTGIDSIVQKE*IVEPSKQLVVL Trigger: GAGAACTACCAGTTGTTTGCTGGGCTCTACAATTCATTCCTTTTGGACAATGGAGTCTATTCCTGTGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTGTCTCCATCGGTTTCCAAACCACTGTTCAATTCCATTTAACGAATTCAAACTAGAGAAAGTTTTCTaGCAGTCTGAGCATTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LCLHRFPNHCSIPFNEFKLEKVF*QSEHSV Trigger: TACAGAATGCTCAGACTGCAAGAAAACTTTCTCTAG...TTTGAATTCGTTAAATGGAATTGAACAGTGGTTTGGAAACCGATGGAGACAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTGTCTCCATCGGTTTCCAAACCACTGTTCAATTCCATTTAACGAATTCAAATCCTCCATGACTGATTaGAGGCTTAAAGCAATTTTG | + |
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Preference number: 3 (lower is better) Translates to: LCLHRFPNHCSIPFNEFKSSMTD*RLKAIL Trigger: CAAAATTGCTTTAAGCCTCAAATCAGTCATGGAGGA...TTTGAATTCGTTAAATGGAATTGAACAGTGGTTTGGAAACCGATGGAGACAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 72 bp | AAAGTTCAACATTCTAGAAGACACACAGGTCAGTTATaGATATCTGCTCCACCAAATAGACATCGGACTAAA | + |
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Preference number: 3 (lower is better) Translates to: KVQHSRRHTGQL*ISAPPNRHRTK Trigger: TTTAGTCCGATGTCTATTTGGTGGAGCAGATATTCATAACTGACCTGTGTGTCTTCTAGAATGTTGAACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| 3UTR TCA 72 bp | AAGAATGCATCAGTCCTGTCATTGTGGATTAAGGCATaGAGGCTAAATGTGATATGGACAGATGTAAACATT | + |
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Preference number: 3 (lower is better) Translates to: KNASVLSLWIKA*RLNVIWTDVNI Trigger: AATGTTTACATCTGTCCATATCACATTTAGCCTTCATGCCTTAATCCACAATGACAGGACTGATGCATTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS-3UTR TCA 90 bp | AGACCAATGAGAGCCCCTGGAGCTCCACTGCACTCGTGCGAAGGGCTTGTGACCAGGGACTGGTGGTCCTaGGGAGAGCTTTCGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPMRAPGAPLHSCEGLVTRDWWS*GELSQA Trigger: GGCCTGCGAAAGCTCTCCTCAGGACCACCAGTCCCT...GGTCACAAGCCCTTCGCACGAGTGCAGTGGAGCTCCAGGGGCTCTCATTGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS-3UTR GCA 90 bp | AGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACAACTGCAGAACCGGGCTaGTCTGCTGGCCCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGRKSPSPHCLPHTLLTTAEPG*SAGPAR Trigger: ACGAGCAGGGCCAGCAGAGCAGCCCGGTTCTGCAGT...TGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | AGACCAATGAGAGCCCCTGGAGCTCCACTGCACTCGTGCGAAGGGCTTGTGACCCTCGTCTTTCTGTGGTaGGACAGGATTATCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPMRAPGAPLHSCEGLVTLVFLW*DRIIPA Trigger: TGCAGGGATAATCCTGTCTCACCACAGAAAGACGAG...GGTCACAAGCCCTTCGCACGAGTGCAGTGGAGCTCCAGGGGCTCTCATTGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACAACTGCAGAACCGGGCTaGTCTGCTGGCCCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISPATIPTLEATITVFFTTAEPG*SAGPAR Trigger: ACGAGCAGGGCCAGCAGAGCAGCCCGGTTCTGCAGT...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | AGACCAATGAGAGCCCCTGGAGCTCCACTGCACTCGTGCGAAGGGCTTGTGACCGGCTCGGCGGTTTTCTaGATAACATCGTTGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPMRAPGAPLHSCEGLVTGSAVF*ITSLNL Trigger: CAGATTCAACGATGTTATGCAGAAAACCGCCGAGCC...GGTCACAAGCCCTTCGCACGAGTGCAGTGGAGCTCCAGGGGCTCTCATTGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| 3UTR CAA 72 bp | TCACTGCAGGGGAGGCCTGGCAGTGGGATTGTCAGGTaGGTTTGGATGTCAGGACGTGGTGATCACATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLQGRPGSGIVR*VWMSGRGDHIC Trigger: GCAAATGTGATCACCACGTCCTGACATCCAAACCAACCTGACAATCCCACTGCCAGGCCTCCCCTGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACTATTGGCTCAGCCCCTaGATCCACTCTAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KERKKVTKSPLPTSHAADYWLSP*IHSRLL Trigger: CAGGAGCCTAGAGTGGATGCAGGGGCTGAGCCAATA...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | AGACCAATGAGAGCCCCTGGAGCTCCACTGCACTCGTGCGAAGGGCTTGTGACCCATCTTCACAAAATCTaGAAGAGGGAGCTGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RPMRAPGAPLHSCEGLVTHLHKI*KRELCM Trigger: CATGCACAGCTCCCTCTTGCAGATTTTGTGAAGATG...GGTCACAAGCCCTTCGCACGAGTGCAGTGGAGCTCCAGGGGCTCTCATTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCAGACAGGATTATCCCTaGAACTCTCTCCCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CKLSAEAQQCSALCSVSIRQDYP*NSLPRW Trigger: CCAGCGAGGGAGAGAGTTGCAGGGATAATCCTGTCT...GATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCGGTTTCCAAACCACTGTTCAAACTGTCCCATCCTTCTaGCAGGGACTGGTGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQCSALCSVSIGFQTTVQTVPSF*QGLVVL Trigger: CAGGACCACCAGTCCCTGCCAGAAGGATGGGACAGT...TTGAACAGTGGTTTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACATATTGGCTCAGCCCCTaGATCCACTCTAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPATIPTLEATITVFFTYWLSP*IHSRLL Trigger: CAGGAGCCTAGAGTGGATGCAGGGGCTGAGCCAATA...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACAAGACAGGATTATCCCTaGAACTCTCTCCCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGRKSPSPHCLPHTLLTRQDYP*NSLPRW Trigger: CCAGCGAGGGAGAGAGTTGCAGGGATAATCCTGTCT...TGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTGAATATCCTTCCAGTTaGCCCATCCTTGGTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLQKPNSAVPSALSEYPSS*PILGRS Trigger: AGAACGACCAAGGATGGGTCAACTGGAAGGATATTC...AGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACAGGCTCGGCGGTTTTCTaGATAACATCGTTGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRGRKSPSPHCLPHTLLTGSAVF*ITSLNL Trigger: CAGATTCAACGATGTTATGCAGAAAACCGCCGAGCC...TGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTATGTTCTTCTTCAGTTaGCCTCCATGGCTTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLQKPNSAVPSALSMFFFS*PPWLVK Trigger: CTTGACAAGCCATGGAGGTCAACTGAAGAAGAACAT...AGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACATTGCGCTGTTCACGTTaGTCTTCCCACTGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGRKSPSPHCLPHTLLTLRCSR*SSHCFC Trigger: ACAAAAACAGTGGGAAGAGCAACGTGAACAGCGCAA...TGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACCATCTTCACAAAATCTaGAAGAGGGAGCTGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KERKKVTKSPLPTSHAADHLHKI*KRELCM Trigger: CATGCACAGCTCCCTCTTGCAGATTTTGTGAAGATG...GTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCGGTTTCCAAACCACTGTTCAACAGTTGACCCATCCTTaGTCGTTCTCATCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQCSALCSVSIGFQTTVQQLTHP*SFSSMF Trigger: GAACATGGATGAGAACGACCAAGGATGGGTCAACTG...TTGAACAGTGGTTTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| 3UTR CAA 72 bp | AGAAACAAGGAGAGGAAGAAAGTCACCAAGTCCCCATaGCCTACCTCACACGCTGCTGACAGGACCAATATG | + |
|
Preference number: 4 (lower is better) Translates to: RNKERKKVTKSP*PTSHAADRTNM Trigger: CATATTGGTCCTGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCTTGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCGGTTTCCAAACCACTGTTCAAATGTTCTTCTTCAGTTaGCCTCCATGGCTTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQCSALCSVSIGFQTTVQMFFFS*PPWLVK Trigger: CTTGACAAGCCATGGAGGTCAACTGAAGAAGAACAT...TTGAACAGTGGTTTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACATGCTCTGACTTGATGTaGATATCCTTCCAGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: ISPATIPTLEATITVFFTCSDLM*ISFQLT Trigger: GGTCAACTGGAAGGATATTCACATCAAGTCAGAGCA...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGTCTCCATCGGTTTCCAAACCACTGTTCAATTCCATTTAACGAATTCAAAAGGGACTGGTGGTCCTaGGGAGAGCTTTCGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLHRFPNHCSIPFNEFKRDWWS*GELSQA Trigger: GGCCTGCGAAAGCTCTCCTCAGGACCACCAGTCCCT...TTTGAATTCGTTAAATGGAATTGAACAGTGGTTTGGAAACCGATGGAGACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACATTGCGCTGTTCACGTTaGTCTTCCCACTGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISPATIPTLEATITVFFTLRCSR*SSHCFC Trigger: ACAAAAACAGTGGGAAGAGCAACGTGAACAGCGCAA...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR CCA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTCAGTTGACCCATCCTTaGTCGTTCTCATCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLHELAHSLSSWSLLPLIQLTHP*SFSSMF Trigger: GAACATGGATGAGAACGACCAAGGATGGGTCAACTG...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCTTCACTATAGTGCTCTaGCTTGATGTGAATATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CKLSAEAQQCSALCSVSIFTIVL*LDVNIL Trigger: AAGGATATTCACATCAAGTCAGAGCACTATAGTGAA...GATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTCTTTTCGTTTCTCCTTaGGCTGTTCACGTTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLHELAHSLSSWSLLPLILFVSP*AVHVAL Trigger: AAGAGCAACGTGAACAGCGCAAGGAGAAACGAAAAG...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR CCA 90 bp | TACTCTGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTATAATTTCAAACACATaGTTAACGGCCAGGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSANSLQKPNSAVPSALSIISNT*LTARTF Trigger: AAAAGTCCTGGCCGTTAACCATGTGTTTGAAATTAT...AGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTTTCACTATAGTGCTCTaGCTTGATGTGAATATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLHELAHSLSSWSLLPLIFTIVL*LDVNIL Trigger: AAGGATATTCACATCAAGTCAGAGCACTATAGTGAA...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGTCTCCATCGGTTTCCAAACCACTGTTCAATTCCATTTAACGAATTCAAACTCGTCTTTCTGTGGTaGGACAGGATTATCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLHRFPNHCSIPFNEFKLVFLW*DRIIPA Trigger: TGCAGGGATAATCCTGTCTCACCACAGAAAGACGAG...TTTGAATTCGTTAAATGGAATTGAACAGTGGTTTGGAAACCGATGGAGACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCACAACATAGACTAGAGAAAGTTTTCTTGCAGTCTGAGCATTCTGTAAAGTGCTCTGACTTGATGTaGATATCCTTCCAGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: IPQHRLEKVFLQSEHSVKCSDLM*ISFQLT Trigger: GGTCAACTGGAAGGATATTCACATCAAGTCAGAGCA...CTTTACAGAATGCTCAGACTGCAAGAAAACTTTCTCTAGTCTATGTTGTGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| 3UTR CAA 72 bp | TTTAAAATTCCACAACATAGACTAGAGAAAGTTTTCTaGCAGTCTGAGCATTCTGTAAAGCACCGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FKIPQHRLEKVF*QSEHSVKHRTA Trigger: GGCAGTGCGGTGCTTTACAGAATGCTCAGACTGCAAGAAAACTTTCTCTAGTCTATGTTGTGGAATTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCACAACATAGACTAGAGAAAGTTTTCTTGCAGTCTGAGCATTCTGTAAAGGTAAAGAATGCCTCTTaGCAGTCTCTTGTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPQHRLEKVFLQSEHSVKVKNAS*QSLVSK Trigger: CTTGGAAACAAGAGACTGGCAAGAGGCATTCTTTAC...CTTTACAGAATGCTCAGACTGCAAGAAAACTTTCTCTAGTCTATGTTGTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAAACAACTGGTAGTTCTCCTAGAATTAATGTATTTCTTAGACAAAACAGTAAAGAATGCCTCTTaGCAGTCTCTTGTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSKQLVVLLELMYFLDKTVKNAS*QSLVSK Trigger: CTTGGAAACAAGAGACTGGCAAGAGGCATTCTTTAC...TGTTTTGTCTAAGAAATACATTAATTCTAGGAGAACTACCAGTTGTTTGCTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAAACAACTGGTAGTTCTCCTAGAATTAATGTATTTCTTAGACAAAACAGATTCCGTAACTGGTTaGTTGTTTAAATGTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSKQLVVLLELMYFLDKTDSVTG*LFKCES Trigger: GGACTCACATTTAAACAAGCAACCAGTTACGGAATC...TGTTTTGTCTAAGAAATACATTAATTCTAGGAGAACTACCAGTTGTTTGCTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAAACAACTGGTAGTTCTCCTAGAATTAATGTATTTCTTAGACAAAACAATAATTTCAAACACATaGTTAACGGCCAGGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSKQLVVLLELMYFLDKTIISNT*LTARTF Trigger: AAAAGTCCTGGCCGTTAACCATGTGTTTGAAATTAT...TGTTTTGTCTAAGAAATACATTAATTCTAGGAGAACTACCAGTTGTTTGCTGGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS TCA 90 bp | CTGCAGAACCGGGCTGCTCTGCTGGCCCTGCTCGTCTTTCTGTGGTaGGACAGGATTATCCCTGCAACTCTCTCCCTCGCTGGCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQNRAALLALLVFLW*DRIIPATLSLAGTV Trigger: GACAGTGCCAGCGAGGGAGAGAGTTGCAGGGATAATCCTGTCTCACCACAGAAAGACGAGCAGGGCCAGCAGAGCAGCCCGGTTCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS GCA 90 bp | TCTGCTGGCCCTGCTCGTCTTTCTGTGGTGAGACAGGATTATCCCTaGAACTCTCTCCCTCGCTGGCACTGTCCCATCCTTCTGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGPARLSVVRQDYP*NSLPRWHCPILLAG Trigger: CCCTGCCAGAAGGATGGGACAGTGCCAGCGAGGGAGAGAGTTGCAGGGATAATCCTGTCTCACCACAGAAAGACGAGCAGGGCCAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS CCA 90 bp | CTTTCTGTGGTGAGACAGGATTATCCCTGCAACTCTCTCCCTCGCTaGCACTGTCCCATCCTTCTGGCAGGGACTGGTGGTCCTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSVVRQDYPCNSLPR*HCPILLAGTGGPEE Trigger: CTCCTCAGGACCACCAGTCCCTGCCAGAAGGATGGGACAGTGCCAGCGAGGGAGAGAGTTGCAGGGATAATCCTGTCTCACCACAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGGAAGAAAGTCACCAAGTCCCCATTGCCTACCTCACACGCTGCTGACACCTCTTGCCAGTCTCTaGTTTCCAAGAACTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRGRKSPSPHCLPHTLLTPLASL*FPRTPG Trigger: TCCTGGAGTTCTTGGAAACAAGAGACTGGCAAGAGG...TGTCAGCAGCGTGTGAGGTAGGCAATGGGGACTTGGTGACTTTCTTCCTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS GCA 90 bp | TTTCATCAGCTTCTTCAGTTGCCGTTTAGATATTGGCTCAGCCCCTaGATCCACTCTAGGCTCCTGTCTCTCCTCTTCACCGTCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FHQLLQLPFRYWLSP*IHSRLLSLLFTVTR Trigger: ACGAGTGACGGTGAAGAGGAGAGACAGGAGCCTAGAGTGGATGCAGGGGCTGAGCCAATATCTAAACGGCAACTGAAGAAGCTGATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040321.13 ENSMUST00000159481.8 ENSMUST00000159622.8 ENSMUST00000161141.2 ENSMUST00000162864.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCCATGTTCTTCTTCAGTaGACCTCCATGGCTTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CKLSAEAQQCSALCSVSIHVLLQ*TSMACQ Trigger: TTGACAAGCCATGGAGGTCAACTGAAGAAGAACATG...GATGGAGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACACCTCTTGCCAGTCTCTaGTTTCCAAGAACTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISPATIPTLEATITVFFTPLASL*FPRTPG Trigger: TCCTGGAGTTCTTGGAAACAAGAGACTGGCAAGAGG...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
||
| CDS CCA 90 bp | GAGCAACATCTCTCCGAACGCGCTTCCTGTCGTTGCCATCTGAGTTaGACTCCAGCTGGCGTCGTTCTAATTTCTTTCTCTTCCGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EQHLSERASCRCHLS*TPAGVVLISFSSVF Trigger: AAAAACGGAAGAGAAAGAAATTAGAACGACGCCAGCTGGAGTCCAACTCAGATGGCAACGACAGGAAGCGCGTTCGGAGAGATGTTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040321.13 ENSMUST00000159481.8 ENSMUST00000161141.2 ENSMUST00000162864.8 |
||
| CDS-3UTR CAA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTCTTGCGCTGTTCACGTaGCTCTTCCCACTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DLHELAHSLSSWSLLPLILALFT*LFPLFL Trigger: CAAAAACAGTGGGAAGAGCAACGTGAACAGCGCAAG...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS-3UTR CAA 90 bp | ATCTCCCCAGCAACAATCCCGACTCTTGAGGCGACCATCACTGTCTTCTTCACATCTTTTCGTTTCTCCTaGCGCTGTTCACGTTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ISPATIPTLEATITVFFTSFRFS*RCSRCS Trigger: AGAGCAACGTGAACAGCGCAAGGAGAAACGAAAAGA...TGTGAAGAAGACAGTGATGGTCGCCTCAAGAGTCGGGATTGTTGCTGGGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS-3UTR CAA 90 bp | CAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCGGTTTCCAAACCACTGTTCAATCTTTTCGTTTCTCCTaGCGCTGTTCACGTTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QQCSALCSVSIGFQTTVQSFRFS*RCSRCS Trigger: AGAGCAACGTGAACAGCGCAAGGAGAAACGAAAAGA...TTGAACAGTGGTTTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS CCA 90 bp | CCACTGTTTTTGTTTCATCAGCTTCTTCAGTTGCCGTTTAGATATTaGCTCAGCCCCTGCATCCACTCTAGGCTCCTGTCTCTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PLFLFHQLLQLPFRY*LSPCIHSRLLSLLF Trigger: GAAGAGGAGAGACAGGAGCCTAGAGTGGATGCAGGGGCTGAGCCAATATCTAAACGGCAACTGAAGAAGCTGATGAAACAAAAACAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040321.13 ENSMUST00000159481.8 ENSMUST00000159622.8 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS-3UTR CAA 90 bp | TACTCTGCAAACTCTCTGCAGAAGCCCAACAGTGCAGTGCCCTCTGCTCTGTCTTCCGTAACTGGTTGCTaGTTTAAATGTGAGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: YSANSLQKPNSAVPSALSSVTGC*FKCESL Trigger: AAGGGACTCACATTTAAACAAGCAACCAGTTACGGA...AGACAGAGCAGAGGGCACTGCACTGTTGGGCTTCTGCAGAGAGTTTGCAGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS-3UTR CAA 90 bp | CAACAGTGCAGTGCCCTCTGCTCTGTCTCCATCGGTTTCCAAACCACTGTTCAATGTAAAGAATGCCTCTaGCCAGTCTCTTGTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QQCSALCSVSIGFQTTVQCKECL*PVSCFQ Trigger: TTGGAAACAAGAGACTGGCAAGAGGCATTCTTTACA...TTGAACAGTGGTTTGGAAACCGATGGAGACAGAGCAGAGGGCACTGCACTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS-3UTR CAA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTTCCGTAACTGGTTGCTaGTTTAAATGTGAGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: DLHELAHSLSSWSLLPLISVTGC*FKCESL Trigger: AAGGGACTCACATTTAAACAAGCAACCAGTTACGGA...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS-3UTR CAA 90 bp | GACCTCCATGAGCTAGCTCACTCACTGAGCTCATGGTCTCTGCTGCCATTAATTTGTAAAGAATGCCTCTaGCCAGTCTCTTGTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: DLHELAHSLSSWSLLPLICKECL*PVSCFQ Trigger: TTGGAAACAAGAGACTGGCAAGAGGCATTCTTTACA...AATTAATGGCAGCAGAGACCATGAGCTCAGTGAGTGAGCTAGCTCATGGAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS GCA 90 bp | GACTTTTCGACTGTTCATCTTCACAAAATCTGCAAGAGGGAGCTGTaGATGTTCGATTCCGTAACTGGTTGCTTGTTTAAATGTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: DFSTVHLHKICKREL*MFDSVTGCLFKCES Trigger: GGACTCACATTTAAACAAGCAACCAGTTACGGAATCGAACATGCACAGCTCCCTCTTGCAGATTTTGTGAAGATGAACAGTCGAAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTCTCCATCGGTTTCCAAACCACTGTTCAATTCCATTTAACGAATTCAAACTTGCGCTGTTCACGTaGCTCTTCCCACTGTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: LCLHRFPNHCSIPFNEFKLALFT*LFPLFL Trigger: CAAAAACAGTGGGAAGAGCAACGTGAACAGCGCAAG...TTTGAATTCGTTAAATGGAATTGAACAGTGGTTTGGAAACCGATGGAGACAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS GCA 90 bp | GCTTGTCAAGTAAAACTGCACTGGATGAGAGGCTCGGCGGTTTTCTaGATAACATCGTTGAATCTGTTTATGAAGTTTCTTAATATCCTT | + |
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Preference number: 5 (lower is better) Translates to: ACQVKLHWMRGSAVF*ITSLNLFMKFLNIL Trigger: AAGGATATTAAGAAACTTCATAAACAGATTCAACGATGTTATGCAGAAAACCGCCGAGCCTCTCATCCAGTGCAGTTTTACTTGACAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040321.13 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS TCA 72 bp | CGGGCTGCTCTGCTGGCCCTGCTCGTCTTTCTGTGGTaGGACAGGATTATCCCTGCAACTCTCTCCCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: RAALLALLVFLW*DRIIPATLSLA Trigger: AGCGAGGGAGAGAGTTGCAGGGATAATCCTGTCTCACCACAGAAAGACGAGCAGGGCCAGCAGAGCAGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS CAA 72 bp | CTGCGAGCAACATCTCTCCGAACGCGCTTCCTGTCGTaGCCATCTGAGTTGGACTCCAGCTGGCGTCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LRATSLRTRFLS*PSELDSSWRRS Trigger: AGAACGACGCCAGCTGGAGTCCAACTCAGATGGCAACGACAGGAAGCGCGTTCGGAGAGATGTTGCTCGCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040321.13 ENSMUST00000159481.8 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS CAA 90 bp | CGGAGGCTGCTGCGAGCAACATCTCTCCGAACGCGCTTCCTGTCGTaGCCATCTGAGTTGGACTCCAGCTGGCGTCGTTCTAATTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RRLLRATSLRTRFLS*PSELDSSWRRSNFF Trigger: AAAGAAATTAGAACGACGCCAGCTGGAGTCCAACTCAGATGGCAACGACAGGAAGCGCGTTCGGAGAGATGTTGCTCGCAGCAGCCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040321.13 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS GCA 72 bp | CCTGCTCGTCTTTCTGTGGTGAGACAGGATTATCCCTaGAACTCTCTCCCTCGCTGGCACTGTCCCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: PARLSVVRQDYP*NSLPRWHCPIL Trigger: AAGGATGGGACAGTGCCAGCGAGGGAGAGAGTTGCAGGGATAATCCTGTCTCACCACAGAAAGACGAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS CCA 72 bp | CTCTCCGAACGCGCTTCCTGTCGTTGCCATCTGAGTTaGACTCCAGCTGGCGTCGTTCTAATTTCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LSERASCRCHLS*TPAGVVLISFS Trigger: AGAGAAAGAAATTAGAACGACGCCAGCTGGAGTCCAACTCAGATGGCAACGACAGGAAGCGCGTTCGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040321.13 ENSMUST00000159481.8 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS CAA 90 bp | CCAGTTGACCCATCCTTGGTCGTTCTCATCCATGTTCTTCTTCAGTaGACCTCCATGGCTTGTCAAGTAAAACTGCACTGGATGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PVDPSLVVLIHVLLQ*TSMACQVKLHWMRG Trigger: GCCTCTCATCCAGTGCAGTTTTACTTGACAAGCCATGGAGGTCAACTGAAGAAGAACATGGATGAGAACGACCAAGGATGGGTCAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040321.13 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS CCA 72 bp | TTGTTTCATCAGCTTCTTCAGTTGCCGTTTAGATATTaGCTCAGCCCCTGCATCCACTCTAGGCTCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LFHQLLQLPFRY*LSPCIHSRLLS Trigger: AGACAGGAGCCTAGAGTGGATGCAGGGGCTGAGCCAATATCTAAACGGCAACTGAAGAAGCTGATGAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040321.13 ENSMUST00000159481.8 ENSMUST00000159622.8 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS CAA 72 bp | CTCTTCCCACTGTTTTTGTTTCATCAGCTTCTTCAGTaGCCGTTTAGATATTGGCTCAGCCCCTGCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: LFPLFLFHQLLQ*PFRYWLSPCIH Trigger: GTGGATGCAGGGGCTGAGCCAATATCTAAACGGCAACTGAAGAAGCTGATGAAACAAAAACAGTGGGAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040321.13 ENSMUST00000159481.8 ENSMUST00000159622.8 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS CAA 72 bp | CCATCCTTGGTCGTTCTCATCCATGTTCTTCTTCAGTaGACCTCCATGGCTTGTCAAGTAAAACTGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: PSLVVLIHVLLQ*TSMACQVKLHW Trigger: CCAGTGCAGTTTTACTTGACAAGCCATGGAGGTCAACTGAAGAAGAACATGGATGAGAACGACCAAGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040321.13 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS CAA 72 bp | AGGGAGCTGTGCATGTTCGATTCCGTAACTGGTTGCTaGTTTAAATGTGAGTCCCTTGTGATGGTTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RELCMFDSVTGC*FKCESLVMVVV Trigger: GACCACAACCATCACAAGGGACTCACATTTAAACAAGCAACCAGTTACGGAATCGAACATGCACAGCTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS GCA 72 bp | TCTTCCCACTGTTTTTGTTTCATCAGCTTCTTCAGTTaGCGTTTAGATATTGGCTCAGCCCCTGCATCCACT | + |
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Preference number: 6 (lower is better) Translates to: SSHCFCFISFFS*RLDIGSAPAST Trigger: AGTGGATGCAGGGGCTGAGCCAATATCTAAACGGCAACTGAAGAAGCTGATGAAACAAAAACAGTGGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040321.13 ENSMUST00000159481.8 ENSMUST00000159622.8 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS GCA 72 bp | AAGAGGGAGCTGTGCATGTTCGATTCCGTAACTGGTTaGTTGTTTAAATGTGAGTCCCTTGTGATGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: KRELCMFDSVTG*LFKCESLVMVV Trigger: CACAACCATCACAAGGGACTCACATTTAAACAAGCAACCAGTTACGGAATCGAACATGCACAGCTCCCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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| CDS GCA 72 bp | GTAAAACTGCACTGGATGAGAGGCTCGGCGGTTTTCTaGATAACATCGTTGAATCTGTTTATGAAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VKLHWMRGSAVF*ITSLNLFMKFL Trigger: AAGAAACTTCATAAACAGATTCAACGATGTTATGCAGAAAACCGCCGAGCCTCTCATCCAGTGCAGTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040321.13 ENSMUST00000161141.2 ENSMUST00000162864.8 |
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| CDS GCA 72 bp | ACTGTTCATCTTCACAAAATCTGCAAGAGGGAGCTGTaGATGTTCGATTCCGTAACTGGTTGCTTGTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: TVHLHKICKREL*MFDSVTGCLFK Trigger: TTTAAACAAGCAACCAGTTACGGAATCGAACATGCACAGCTCCCTCTTGCAGATTTTGTGAAGATGAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040321.13 ENSMUST00000162864.8 |
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