Pregenerated sensors for TRMO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028331Ensembl transcript IDs: ENSMUST00000030015.6, ENSMUST00000086563.11, ENSMUST00000151903.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCGTCAGGAGCATTaGAGCGGCTCTAGGTGCTGCTCTCCTGCTGGGTCCGGCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: KGTCGQARGLGRQEH*SGSRCCSPAGSGSL Trigger: CAGAGAGCCGGACCCAGCAGGAGAGCAGCACCTAGAGCCGCTTCAATGCTCCTGACGCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR CCA 90 bp | GAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTaGGGCGTCAGGAGCATTGAAGCGGCTCTAGGTGCTGCTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: EMAQWVRALVARLED*GVRSIEAALGAALL Trigger: CAGGAGAGCAGCACCTAGAGCCGCTTCAATGCTCCTGACGCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR GCA 90 bp | CATTCACGGAGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTaGTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: HSRSWRDGSAVKSTD*SSEGPEFKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCTCCGTGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR TCA 90 bp | CCGTTGGGAGAGGGAGAGGGAGGGAGTACAGTCAAAGCAGTAAGATaGCAAGAGCAGGCACATCAGATGCCAATGGAGCTTCTGAAAACA | + |
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Preference number: 1 (lower is better) Translates to: PLGEGEGGSTVKAVR*QEQAHQMPMELLKT Trigger: TGTTTTCAGAAGCTCCATTGGCATCTGATGTGCCTGCTCTTGTCATCTTACTGCTTTGACTGTACTCCCTCCCTCTCCCTCTCCCAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR GCA 90 bp | ATTACATATAATCCCTTTCAAACCACAATGAGTATCTTAGAAGTATaGGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTC | + |
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Preference number: 1 (lower is better) Translates to: ITYNPFQTTMSILEV*DNIKTPFTELERWL Trigger: GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGTTTGAAAGGGATTATATGTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCGTCAAAGCAGTAAGATaGCAAGAGCAGGCACATCAG | + |
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Preference number: 2 (lower is better) Translates to: SEMAQWVRALVARLEDWGVKAVR*QEQAHQ Trigger: CTGATGTGCCTGCTCTTGTCATCTTACTGCTTTGAC...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR TCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGGGGCGTCAGGAGCATTaGAGCGGCTCTAGGTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKGRQEH*SGSRCC Trigger: GCAGCACCTAGAGCCGCTTCAATGCTCCTGACGCCC...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCTCGAAGCACCACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTGGTCCGGCTCTCTGCTaGACCTCCTCTTCCACTGAT | + |
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Preference number: 2 (lower is better) Translates to: RSRSTTSENHCSGSIASSGPALC*TSSSTD Trigger: ATCAGTGGAAGAGGAGGTGCAGCAGAGAGCCGGACC...ACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTGGTGCTTCGAGATCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR CCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGGTGCTGCTCTCCTGCTaGGTCCGGCTCTCTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKVLLSC*VRLSAA Trigger: TGCAGCAGAGAGCCGGACCCAGCAGGAGAGCAGCAC...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR CCA 90 bp | AGATCTCGAAGCACCACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTAGTGAGATGGCCCAGTaGGTAAGGGCACTTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSRSTTSENHCSGSIASSSEMAQ*VRALVA Trigger: GGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT...ACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTGGTGCTTCGAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR GCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGAGCGGCTCTAGGTGCTaGTCTCCTGCTGGGTCCGGC | + |
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Preference number: 2 (lower is better) Translates to: TTMSILEVCDNIKTPFTESGSRC*SPAGSG Trigger: GCCGGACCCAGCAGGAGAGCAGCACCTAGAGCCGCT...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR CCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGGCCAGGCTAGAGGACTaGGGCGTCAGGAGCATTGAA | + |
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Preference number: 2 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKARLED*GVRSIE Trigger: TTCAATGCTCCTGACGCCCCAGTCCTCTAGCCTGGC...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGGTTCTTCTCTTCCGTTaGGAGAGGGAGAGGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TTMSILEVCDNIKTPFTEVLLFR*EREREG Trigger: TCCCTCCCTCTCCCTCTCCCAACGGAAGAGAAGAAC...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCCCCATCTGTGCCATGTaGACTTTCTTGGGTTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LEVCDNIKTPFTELERWLPICAM*TFLGFV Trigger: AACAAAACCCAAGAAAGTGCACATGGCACAGATGGG...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCTCGAAGCACCACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTACTTCAACAAGTATTTaGAGCTTTGTGAGCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: RSRSTTSENHCSGSIASSTSTSI*SFVSPS Trigger: AGATGGGCTCACAAAGCTGCAAATACTTGTTGAAGT...ACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTGGTGCTTCGAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGTCTGTAAATGAGATCTaGCGCTCTCTTCTAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: TTMSILEVCDNIKTPFTESVNEI*RSLLEC Trigger: ACACTCTAGAAGAGAGCGCCAGATCTCATTTACAGA...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR CCA 72 bp | AGGCCTTGGGGGAGAGGGGGCAGTGAGATGGCCCAGTaGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGG | + |
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Preference number: 3 (lower is better) Translates to: RPWGRGGSEMAQ*VRALVARLEDW Trigger: CCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACTGCCCCCTCTCCCCCAAGGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR TCA 72 bp | TGTGGCCAGGCTAGAGGACTGGGGCGTCAGGAGCATTaGAGCGGCTCTAGGTGCTGCTCTCCTGCTGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: CGQARGLGRQEH*SGSRCCSPAGS Trigger: GGACCCAGCAGGAGAGCAGCACCTAGAGCCGCTTCAATGCTCCTGACGCCCCAGTCCTCTAGCCTGGCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR CCA 72 bp | CAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTaGGGCGTCAGGAGCATTGAAGCGGCTCTAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: QWVRALVARLED*GVRSIEAALGA Trigger: AGCACCTAGAGCCGCTTCAATGCTCCTGACGCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR GCA 72 bp | CTAGGTGCTGCTCTCCTGCTGGGTCCGGCTCTCTGCTaGACCTCCTCTTCCACTGATGATTGTTCTTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: LGAALLLGPALC*TSSSTDDCSSL Trigger: AAGAGAAGAACAATCATCAGTGGAAGAGGAGGTGCAGCAGAGAGCCGGACCCAGCAGGAGAGCAGCACCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR GCA 72 bp | AGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTaGTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SWRDGSAVKSTD*SSEGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR CAA 90 bp | AGATCTCGAAGCACCACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTTGTTCTTCTCTTCCGTaGGGAGAGGGAGAGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: RSRSTTSENHCSGSIASSCSSLP*GEGEGG Trigger: CCCTCCCTCTCCCTCTCCCAACGGAAGAGAAGAACA...ACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTGGTGCTTCGAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR TCA 72 bp | GAGGGAGAGGGAGGGAGTACAGTCAAAGCAGTAAGATaGCAAGAGCAGGCACATCAGATGCCAATGGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: EGEGGSTVKAVR*QEQAHQMPMEL Trigger: AAGCTCCATTGGCATCTGATGTGCCTGCTCTTGTCATCTTACTGCTTTGACTGTACTCCCTCCCTCTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR TCA 72 bp | CCAGCAACCACATGGTGGTTCACAACCATCTGTAAATaGGATCTGGCGCTCTCTTCTAGAGTGTGTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PATTWWFTTICK*DLALSSRVCED Trigger: GTCTTCACACACTCTAGAAGAGAGCGCCAGATCTCATTTACAGATGGTTGTGAACCACCATGTGGTTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR CCA 72 bp | CCACATGGTGGTTCACAACCATCTGTAAATGAGATCTaGCGCTCTCTTCTAGAGTGTGTGAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: PHGGSQPSVNEI*RSLLECVKTAT Trigger: TGTAGCTGTCTTCACACACTCTAGAAGAGAGCGCCAGATCTCATTTACAGATGGTTGTGAACCACCATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR-3UTR CAA 90 bp | CACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTCTTTCTTTCTGAAAGCACTTTCTTGGGTTTaGTTTTCTTGGTTGGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: HFRESLFRINSQQSFFLKALSWV*FSWLGS Trigger: ACTACCCAACCAAGAAAACAAAACCCAAGAAAGTGC...TTTCAGAAAGAAAGACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR GCA 72 bp | AATCCCTTTCAAACCACAATGAGTATCTTAGAAGTATaGGATAACATAAAAACTCCATTCACGGAGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: NPFQTTMSILEV*DNIKTPFTELE Trigger: CTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGTTTGAAAGGGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCTCTCCAAGCCGCGCATaGTTACAGGCCGCTGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: SEMAQWVRALVARLEDWGSPSRA*LQAAES Trigger: CGACTCAGCGGCCTGTAACCATGCGCGGCTTGGAGA...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCTCGGCTTGGTTCCAGTaGCAGATCCAACGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SEMAQWVRALVARLEDWGSAWFQ*QIQRSL Trigger: GAGAGAGCGTTGGATCTGGCACTGGAACCAAGCCGA...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCGCTCTCACCTCGGCTTaGTTCCAGTGCCAGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: SEMAQWVRALVARLEDWGALTSA*FQCQIQ Trigger: TTGGATCTGGCACTGGAACCAAGCCGAGGTGAGAGC...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCACAGCACAGCCTCAATaGCACGCTTGGCTTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SEMAQWVRALVARLEDWGTAQPQ*HAWLPL Trigger: CAGAGGAAGCCAAGCGTGCCATTGAGGCTGTGCTGT...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCAGATCCATCTCTGCGTaGGGAGTAAACCGGACTTGT | + |
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Preference number: 4 (lower is better) Translates to: SEMAQWVRALVARLEDWGRSISA*GVNRTC Trigger: ACAAGTCCGGTTTACTCCTCACGCAGAGATGGATCT...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCTGCTGGGTCCGGCTCTCTGCTGCACCTCCTCTTCCACTGATGATTGTTTTGCCCCATTCAGCCTaGGCGGCTGCACTTTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSCWVRLSAAPPLPLMIVLPHSA*AAALLP Trigger: AGGCAAAAGTGCAGCCGCCCAGGCTGAATGGGGCAA...AACAATCATCAGTGGAAGAGGAGGTGCAGCAGAGAGCCGGACCCAGCAGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCTGCTGGGTCCGGCTCTCTGCTGCACCTCCTCTTCCACTGATGATTGTTGTGGCTACAGATGGATaGCTGCCTTGGAGTGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LSCWVRLSAAPPLPLMIVVATDG*LPWSAN Trigger: ATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCAC...AACAATCATCAGTGGAAGAGGAGGTGCAGCAGAGAGCCGGACCCAGCAGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | GATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGACCAGGCCTTGGGGGAGAGCCGTGCCATCAACCTaGGCCTCAGCCCTCAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: DVKSSLSFSQEKTRPWGRAVPST*ASALSL Trigger: TAAGCTGAGGGCTGAGGCCCAGGTTGATGGCACGGC...TCTCCCCCAAGGCCTGGTCTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCTCTGGCAAAGTGTGCTaGATTTCTGACATGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SEMAQWVRALVARLEDWGSGKVC*ISDMSL Trigger: CAGAGACATGTCAGAAATCCAGCACACTTTGCCAGA...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCTACTTAAATGACGGCTaGCTAGCATCTCCTGAATTG | + |
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Preference number: 4 (lower is better) Translates to: SEMAQWVRALVARLEDWGYLNDG*LASPEL Trigger: CAATTCAGGAGATGCTAGTCAGCCGTCATTTAAGTA...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | GATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGACCAGGCCTTGGGGGAGATCCGGTGGGCCAAGCTaGTTTTCGGGCATATCCATG | + |
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Preference number: 4 (lower is better) Translates to: DVKSSLSFSQEKTRPWGRSGGPS*FSGISM Trigger: CATGGATATGCCCGAAAATCAGCTTGGCCCACCGGA...TCTCCCCCAAGGCCTGGTCTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCTGCTGGGTCCGGCTCTCTGCTGCACCTCCTCTTCCACTGATGATTGTTACGCTTGGCTTCCTCTaGGGAGTGGAAGTACTTAAA | + |
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Preference number: 4 (lower is better) Translates to: LSCWVRLSAAPPLPLMIVTLGFL*GVEVLK Trigger: TTTAAGTACTTCCACTCCGCAGAGGAAGCCAAGCGT...AACAATCATCAGTGGAAGAGGAGGTGCAGCAGAGAGCCGGACCCAGCAGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | GATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGACCAGGCCTTGGGGGAGATGGAGTGGCTACAGATaGATGGCTGCCTTGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: DVKSSLSFSQEKTRPWGRWSGYR*MAALEC Trigger: GCACTCCAAGGCAGCCATCCATCTGTAGCCACTCCA...TCTCCCCCAAGGCCTGGTCTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCAGACCGAGGATCTGCTaGCAGCACAGCCTCAATGGC | + |
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Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLRPRIC*QHSLNG Trigger: GCCATTGAGGCTGTGCTGTCAGCAGATCCTCGGTCT...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | CACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTCTTTCTTTCTGAAACCACCTTCTCCAGCTTaGCCAGCGTCAGCCCTATGG | + |
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Preference number: 4 (lower is better) Translates to: HFRESLFRINSQQSFFLKPPSPA*PASALW Trigger: CCATAGGGCTGACGCTGGCCAAGCTGGAGAAGGTGG...TTTCAGAAAGAAAGACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCGCTGGTCACAACTGTTaGCCGTGCCATCAACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLAGHNC*PCHQPG Trigger: CCCAGGTTGATGGCACGGCCAACAGTTGTGACCAGC...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCCACCAAACCAGCAGGTaGCATGTGCTGTGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLHQTSR*HVLCPQ Trigger: CTGTGGACACAGCACATGTCACCTGCTGGTTTGGTG...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGTCAGGGTCAGCCACCTaGACAGACTCAGAAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKSGSAT*TDSEAS Trigger: ACTGGCTTCTGAGTCTGTTCAGGTGGCTGACCCTGA...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR GCA 90 bp | CACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTCTTTCTTTCTGAAAGAACACTCCAGTCTTTaGCCCATTCAGCCTGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: HFRESLFRINSQQSFFLKEHSSL*PIQPGR Trigger: CCGCCCAGGCTGAATGGGGCAAAGACTGGAGTGTTC...TTTCAGAAAGAAAGACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR GCA 90 bp | CACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTCTTTCTTTCTGAAAACTGTGTTTCTGCACTaGTCCCCGGCAGGACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFRESLFRINSQQSFFLKTVFLH*SPAGPR Trigger: CCTTGGTCCTGCCGGGGAGCAGTGCAGAAACACAGT...TTTCAGAAAGAAAGACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTCGAAGCACCACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTGCTTCCTCTGCGGAGTaGAAGTACTTAAATGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSRSTTSENHCSGSIASSASSAE*KYLNDG Trigger: GCCGTCATTTAAGTACTTCCACTCCGCAGAGGAAGC...ACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTGGTGCTTCGAGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTCTTTCTTTCTGAAACCTCAATGGCACGCTTaGCTTCCTCTGCGGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HFRESLFRINSQQSFFLKPQWHA*LPLRSG Trigger: TCCACTCCGCAGAGGAAGCCAAGCGTGCCATTGAGG...TTTCAGAAAGAAAGACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR GCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGATGGCTGCCTTGGAGTaGCAATCTTGGCTGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKMAALE*QSWLGN Trigger: GTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCAT...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR GCA 90 bp | CACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTCTTTCTTTCTGAAATCGGTCTCTCCTTGGTaGTCTGGCGAGGCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: HFRESLFRINSQQSFFLKSVSPW*SGEAVL Trigger: AAGTACAGCCTCGCCAGAGCACCAAGGAGAGACCGA...TTTCAGAAAGAAAGACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCAAACAGGCTCTGGAGTaGCTACAGATGGATGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLKQALE*LQMDGC Trigger: GCAGCCATCCATCTGTAGCCACTCCAGAGCCTGTTT...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGTACTTTCCCACGCCCTaGGAGCAGCAGCTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TTMSILEVCDNIKTPFTEYFPTP*EQQLVT Trigger: TGTGACCAGCTGCTGCTCTCAGGGCGTGGGAAAGTA...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCCTGAGAGTTTTCTCCTaGGGTCCTGTCTTCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLLRVFS*GPVFKA Trigger: TGCCTTGAAGACAGGACCTCAGGAGAAAACTCTCAG...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCCTACAGATGGATGGCTaGCTTGGAGTGCCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLLQMDG*LGVPIL Trigger: CAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAG...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR GCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGATCCCACTGTGTTTCTaGACTGCTCCCCGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTMSILEVCDNIKTPFTEIPLCF*TAPRQD Trigger: GTCCTGCCGGGGAGCAGTGCAGAAACACAGTGGGAT...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCCCAGCAGGTGACATGTaGTGTGTCCACAGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLPAGDM*CVHSEE Trigger: TTCTTCACTGTGGACACAGCACATGTCACCTGCTGG...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCCTGAGAGCAGCAGCTaGTCACAACTGTTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTMSILEVCDNIKTPFTEPESSS*SQLLAV Trigger: CACGGCCAACAGTTGTGACCAGCTGCTGCTCTCAGG...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR TCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGCTTGGCTGGGAAACATaGTTCCAAGTACCCTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKLGWET*FQVPYW Trigger: CCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAG...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR TCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGAGTGTGCTGGATTTCTaGCATGTCTCTGGACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKSVLDF*HVSGLL Trigger: CAGAAGTCCAGAGACATGTCAGAAATCCAGCACACT...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCCTGACTAGCATCTCCTaGATTGAGCTTCCTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLLTSIS*IELPQI Trigger: GATCTGAGGAAGCTCAATTCAGGAGATGCTAGTCAG...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGGATGGATGGCTGCCTTaGAGTGCCAATCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTMSILEVCDNIKTPFTEDGWLP*SANLGW Trigger: CCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATC...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCTGGAGAGATGGCTCTCTTCAAACAGGCTCTaGAGTGGCTACAGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LEVCDNIKTPFTELERWLSSNRL*SGYRWM Trigger: CATCCATCTGTAGCCACTCCAGAGCCTGTTTGAAGA...GAGCCATCTCTCCAGCTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTCTTTCTTTCTGAAAGCCCTCAGCTTATGGTaGTCATTGTGTACACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFRESLFRINSQQSFFLKALSLW*SLCTLR Trigger: CCTCAGTGTACACAATGACCACCATAAGCTGAGGGC...TTTCAGAAAGAAAGACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR GCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGCCTCAGATCCATCTCTaGGTGAGGAGTAAACCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTMSILEVCDNIKTPFTEPQIHL*VRSKPD Trigger: GTCCGGTTTACTCCTCACGCAGAGATGGATCTGAGG...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGGATGAGGGCTCCGTGTaGAGAACACTCCAGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTMSILEVCDNIKTPFTEDEGSV*RTLQSL Trigger: CAAAGACTGGAGTGTTCTCCACACGGAGCCCTCATC...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTCGAAGCACCACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTTTTCTGACATGTCTCTaGACTTCTGAGAGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSRSTTSENHCSGSIASSFLTCL*TSESFL Trigger: GAGAAAACTCTCAGAAGTCCAGAGACATGTCAGAAA...ACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTGGTGCTTCGAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGTCTCTCTCTGTCTTCTaGCAAAGTGTGCTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKSLSVF*QSVLDF Trigger: GAAATCCAGCACACTTTGCCAGAAGACAGAGAGAGA...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGAACAAAATCCAAACATaGGAAAACTCTTCTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKNKIQT*ENSSRP Trigger: GGGCCTAGAAGAGTTTTCTCATGTTTGGATTTTGTT...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR TCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGATGTCTCTGGACTTCTaGGAGTTTTCTCCTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTMSILEVCDNIKTPFTEMSLDF*EFSPEV Trigger: GACCTCAGGAGAAAACTCTCAGAAGTCCAGAGACAT...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR GCA 90 bp | CACTTCAGAGAATCACTGTTCAGGATCAATAGCCAGCAGTCTTTCTTTCTGAAAAGGCCCATCAAGGAATaGTCAGGGTTATTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HFRESLFRINSQQSFFLKRPIKE*SGLLKM Trigger: CATCTTTAATAACCCTGAGCATTCCTTGATGGGCCT...TTTCAGAAAGAAAGACTGCTGGCTATTGATCCTGAACAGTGATTCTCTGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| 3UTR CAA 72 bp | GTGAGCCCATCTGTGCCATGTGCACTTTCTTGGGTTTaGTTTTCTTGGTTGGGTAGTTTTCAATTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPSVPCALSWV*FSWLGSFQLYS Trigger: AGAATATAATTGAAAACTACCCAACCAAGAAAACAAAACCCAAGAAAGTGCACATGGCACAGATGGGCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CCA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGACCTTCTACTTTCCTTaGTCTATCTGTGCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTMSILEVCDNIKTPFTETFYFP*SICAFF Trigger: GAAGAAGGCACAGATAGACCAAGGAAAGTAGAAGGT...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS TCA 90 bp | GCGGTCCTCGCAGAGCTTCCGGCGGTACACAGACCGAGGATCTGCTaGCAGCACAGCCTCAATGGCACGCTTGGCTTCCTCTGCGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AVLAELPAVHRPRIC*QHSLNGTLGFLCGV Trigger: CACTCCGCAGAGGAAGCCAAGCGTGCCATTGAGGCTGTGCTGTCAGCAGATCCTCGGTCTGTGTACCGCCGGAAGCTCTGCGAGGACCGC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 90 bp | GTGCTCTGGCGAGGCTGTACTTTCCCACGCCCTGAGAGCAGCAGCTaGTCACAACTGTTGGCCGTGCCATCAACCTGGGCCTCAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLWRGCTFPRPESSS*SQLLAVPSTWASAL Trigger: GAGGGCTGAGGCCCAGGTTGATGGCACGGCCAACAGTTGTGACCAGCTGCTGCTCTCAGGGCGTGGGAAAGTACAGCCTCGCCAGAGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 90 bp | GCTCAGTTAAAAGATTCCCTCCAGGGCCGGCTGAACGCACCCACATaGGGCCGCCGTAGCACACGAGCCCTGCTTCTCCAAGCCGCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AQLKDSLQGRLNAPT*GRRSTRALLLQAAH Trigger: ATGCGCGGCTTGGAGAAGCAGGGCTCGTGTGCTACGGCGGCCCCATGTGGGTGCGTTCAGCCGGCCCTGGAGGGAATCTTTTAACTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCTCCACCTTCTCCAGCTaGGCCAGCGTCAGCCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: SEMAQWVRALVARLEDWGSTFSS*ASVSPM Trigger: CATAGGGCTGACGCTGGCCAAGCTGGAGAAGGTGGA...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS TCA 90 bp | TACCCTATTGGCTCAGTTAAAAGATTCCCTGCCTCCAGGGCCGGCTaGACGCACCCACATGGGGCCGCCGTAGCACACGAGCCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YPIGSVKRFPASRAG*THPHGAAVAHEPCF Trigger: GAAGCAGGGCTCGTGTGCTACGGCGGCCCCATGTGGGTGCGTTCAGCCGGCCCTGGAGGCAGGGAATCTTTTAACTGAGCCAATAGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCAGAACACTCCAGTCTTaGCCCCATTCAGCCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SEMAQWVRALVARLEDWGRTLQS*PHSAWA Trigger: CGCCCAGGCTGAATGGGGCAAAGACTGGAGTGTTCT...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS CCA 90 bp | GCTGTACTTTCCCACGCCCTGAGAGCAGCAGCTGGTCACAACTGTTaGCCGTGCCATCAACCTGGGCCTCAGCCCTCAGCTTATGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVLSHALRAAAGHNC*PCHQPGPQPSAYGG Trigger: ACCACCATAAGCTGAGGGCTGAGGCCCAGGTTGATGGCACGGCCAACAGTTGTGACCAGCTGCTGCTCTCAGGGCGTGGGAAAGTACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGCCCAGTGGGTAAGGGCACTTGTGGCCAGGCTAGAGGACTGGGGCTGGGCGGCTGCACTTTaGCCTTGTAGTTCAAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SEMAQWVRALVARLEDWGWAAAL*PCSSNG Trigger: GCCATTTGAACTACAAGGCAAAAGTGCAGCCGCCCA...GCCCCAGTCCTCTAGCCTGGCCACAAGTGCCCTTACCCACTGGGCCATCTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS GCA 90 bp | GGCATTAGGGCGATGAGGGCTCCGTGTGGAGAACACTCCAGTCTTTaGCCCATTCAGCCTGGGCGGCTGCACTTTTGCCTTGTAGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GIRAMRAPCGEHSSL*PIQPGRLHFCLVVQ Trigger: TTGAACTACAAGGCAAAAGTGCAGCCGCCCAGGCTGAATGGGGCAAAGACTGGAGTGTTCTCCACACGGAGCCCTCATCGCCCTAATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGACCAGGCCTTGGGGGAGAGCCTCAATGGCACGCTaGGCTTCCTCTGCGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DVKSSLSFSQEKTRPWGRASMAR*ASSAEW Trigger: CCACTCCGCAGAGGAAGCCAAGCGTGCCATTGAGGC...TCTCCCCCAAGGCCTGGTCTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS GCA 90 bp | AGCTCTTCAGTTCCGGTGGGCCAAGCTGATTTTCGGGCATATCCATaGTCTCACCTCGGCTTGGTTCCAGTGCCAGATCCAACGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSVPVGQADFRAYP*SHLGLVPVPDPTLS Trigger: AGAGAGCGTTGGATCTGGCACTGGAACCAAGCCGAGGTGAGAGCATGGATATGCCCGAAAATCAGCTTGGCCCACCGGAACTGAAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 90 bp | TTCTGCACTGCTCCCCGGCAGGACCAAGGCACCTTCTACTTTCCTTaGTCTATCTGTGCCTTCTTCCAGAAAGCTCTTCAGTTCCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FCTAPRQDQGTFYFP*SICAFFQKALQFRW Trigger: CCACCGGAACTGAAGAGCTTTCTGGAAGAAGGCACAGATAGACCAAGGAAAGTAGAAGGTGCCTTGGTCCTGCCGGGGAGCAGTGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS TCA 90 bp | TCTGTGCCTTCTTCCAGAAAGCTCTTCAGTTCCGGTGGGCCAAGCTaGTTTTCGGGCATATCCATGCTCTCACCTCGGCTTGGTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVPSSRKLFSSGGPS*FSGISMLSPRLGSS Trigger: ACTGGAACCAAGCCGAGGTGAGAGCATGGATATGCCCGAAAATCAGCTTGGCCCACCGGAACTGAAGAGCTTTCTGGAAGAAGGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
||
| CDS GCA 90 bp | CTGATTTTCGGGCATATCCATGCTCTCACCTCGGCTTGGTTCCAGTaGCAGATCCAACGCTCTCTCTCTGTCTTCTGGCAAAGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LIFGHIHALTSAWFQ*QIQRSLSVFWQSVL Trigger: CAGCACACTTTGCCAGAAGACAGAGAGAGAGCGTTGGATCTGGCACTGGAACCAAGCCGAGGTGAGAGCATGGATATGCCCGAAAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
||
| CDS CCA 90 bp | CCTTGGTCTATCTGTGCCTTCTTCCAGAAAGCTCTTCAGTTCCGGTaGGCCAAGCTGATTTTCGGGCATATCCATGCTCTCACCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWSICAFFQKALQFR*AKLIFGHIHALTSA Trigger: AGCCGAGGTGAGAGCATGGATATGCCCGAAAATCAGCTTGGCCCACCGGAACTGAAGAGCTTTCTGGAAGAAGGCACAGATAGACCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
||
| CDS TCA 90 bp | TGTTCTTCTCTTCCGTTGGGAGAGGGAGAGGGAGGGAGTACAGTCTaGACAGACTCAGAAGCCAGTTTAATCCTCACAACCTCTGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSLPLGEGEGGSTV*TDSEASLILTTSAK Trigger: CTTCGCAGAGGTTGTGAGGATTAAACTGGCTTCTGAGTCTGTTCAGACTGTACTCCCTCCCTCTCCCTCTCCCAACGGAAGAGAAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086563.11 |
||
| CDS GCA 90 bp | TCAAACAGGCTCTGGAGTGGCTACAGATGGATGGCTGCCTTGGAGTaGCAATCTTGGCTGGGAAACATGATTCCAAGTACCCTATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SNRLWSGYRWMAALE*QSWLGNMIPSTLLA Trigger: AGCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCACTCCAGAGCCTGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
||
| CDS GCA 90 bp | GTGAGTCGTAGTCAGCAATGTAGGGCTTTATGTCTAGCACAGGTGTaGCGTCTATCATGTCAACTCCAGACAGGTAGACAGCTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSRSQQCRALCLAQV*RLSCQLQTGRQLHL Trigger: AAGGTGGAGCTGTCTACCTGTCTGGAGTTGACATGATAGACGGCACACCTGTGCTAGACATAAAGCCCTACATTGCTGACTACGACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS GCA 90 bp | TTTCTGATCTTCAAACAGGCTCTGGAGTGGCTACAGATGGATGGCTaGCTTGGAGTGCCAATCTTGGCTGGGAAACATGATTCCAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FLIFKQALEWLQMDG*LGVPILAGKHDSKY Trigger: GTACTTGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCACTCCAGAGCCTGTTTGAAGATCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 90 bp | CTCTGGAGTGGCTACAGATGGATGGCTGCCTTGGAGTGCCAATCTTaGCTGGGAAACATGATTCCAAGTACCCTATTGGCTCAGTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LWSGYRWMAALECQS*LGNMIPSTLLAQLK Trigger: TTTTAACTGAGCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCACTCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS TCA 90 bp | TCTTCTGGCAAAGTGTGCTGGATTTCTGACATGTCTCTGGACTTCTaGGAGTTTTCTCCTGAGGTCCTGTCTTCAAGGCATTTCGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSGKVCWISDMSLDF*EFSPEVLSSRHFGL Trigger: GAGACCGAAATGCCTTGAAGACAGGACCTCAGGAGAAAACTCTCAGAAGTCCAGAGACATGTCAGAAATCCAGCACACTTTGCCAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS-3UTR CAA 90 bp | ACCACAATGAGTATCTTAGAAGTATGCGATAACATAAAAACTCCATTCACGGAGAGATGGATGGCTGCCTaGGAGTGCCAATCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TTMSILEVCDNIKTPFTERWMAA*ECQSWL Trigger: CAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCT...CTCCGTGAATGGAGTTTTTATGTTATCGCATACTTCTAAGATACTCATTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS-3UTR CAA 90 bp | TTATATTCTTCCCCTGACGATGTGAAGAGCAGTCTTAGCTTCAGTCAGGAAAAGATTCCAAGTACCCTATaGGCTCAGTTAAAAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LYSSPDDVKSSLSFSQEKIPSTL*AQLKDS Trigger: GGAATCTTTTAACTGAGCCAATAGGGTACTTGGAAT...CTTTTCCTGACTGAAGCTAAGACTGCTCTTCACATCGTCAGGGGAAGAATATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS TCA 72 bp | GGCTCAGTTAAAAGATTCCCTGCCTCCAGGGCCGGCTaGACGCACCCACATGGGGCCGCCGTAGCACACGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSVKRFPASRAG*THPHGAAVAHE Trigger: CTCGTGTGCTACGGCGGCCCCATGTGGGTGCGTTCAGCCGGCCCTGGAGGCAGGGAATCTTTTAACTGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 |
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| CDS CAA 72 bp | TTCCCACGCCCTGAGAGCAGCAGCTGGTCACAACTGTaGGCCGTGCCATCAACCTGGGCCTCAGCCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPRPESSSWSQL*AVPSTWASALS Trigger: GCTGAGGGCTGAGGCCCAGGTTGATGGCACGGCCAACAGTTGTGACCAGCTGCTGCTCTCAGGGCGTGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 90 bp | GGCTGTACTTTCCCACGCCCTGAGAGCAGCAGCTGGTCACAACTGTaGGCCGTGCCATCAACCTGGGCCTCAGCCCTCAGCTTATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GCTFPRPESSSWSQL*AVPSTWASALSLWW Trigger: CCACCATAAGCTGAGGGCTGAGGCCCAGGTTGATGGCACGGCCAACAGTTGTGACCAGCTGCTGCTCTCAGGGCGTGGGAAAGTACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS TCA 72 bp | GCAGAGCTTCCGGCGGTACACAGACCGAGGATCTGCTaGCAGCACAGCCTCAATGGCACGCTTGGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AELPAVHRPRIC*QHSLNGTLGFL Trigger: GAGGAAGCCAAGCGTGCCATTGAGGCTGTGCTGTCAGCAGATCCTCGGTCTGTGTACCGCCGGAAGCTCTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 72 bp | GGCGATGAGGGCTCCGTGTGGAGAACACTCCAGTCTTaGCCCCATTCAGCCTGGGCGGCTGCACTTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GDEGSVWRTLQS*PHSAWAAALLP Trigger: AGGCAAAAGTGCAGCCGCCCAGGCTGAATGGGGCAAAGACTGGAGTGTTCTCCACACGGAGCCCTCATCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS TCA 72 bp | AGCTTGGCCAGCGTCAGCCCTATGGCATTAGGGCGATaGGGGCTCCGTGTGGAGAACACTCCAGTCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLASVSPMALGR*GLRVENTPVFA Trigger: GGCAAAGACTGGAGTGTTCTCCACACGGAGCCCTCATCGCCCTAATGCCATAGGGCTGACGCTGGCCAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS GCA 72 bp | GCGATGAGGGCTCCGTGTGGAGAACACTCCAGTCTTTaGCCCATTCAGCCTGGGCGGCTGCACTTTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AMRAPCGEHSSL*PIQPGRLHFCL Trigger: AAGGCAAAAGTGCAGCCGCCCAGGCTGAATGGGGCAAAGACTGGAGTGTTCTCCACACGGAGCCCTCATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS GCA 72 bp | TGTCCTGGCACGGTAGGAAGCATCCCACTGTGTTTCTaGACTGCTCCCCGGCAGGACCAAGGCACCTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: CPGTVGSIPLCF*TAPRQDQGTFY Trigger: GTAGAAGGTGCCTTGGTCCTGCCGGGGAGCAGTGCAGAAACACAGTGGGATGCTTCCTACCGTGCCAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | CTTGTAAAGGGGCTACAGGAGCCTCTGTCACCCAGCTaGGGACAACACTGTAGGGCACTCTGTCAGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVKGLQEPLSPS*GQHCRALCQLS Trigger: GGACAGCTGACAGAGTGCCCTACAGTGTTGTCCCCAGCTGGGTGACAGAGGCTCCTGTAGCCCCTTTACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 72 bp | CCTGAGGTCCTGTCTTCAAGGCATTTCGGTCTCTCCTaGGTGCTCTGGCGAGGCTGTACTTTCCCACGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PEVLSSRHFGLS*VLWRGCTFPRP Trigger: AGGGCGTGGGAAAGTACAGCCTCGCCAGAGCACCAAGGAGAGACCGAAATGCCTTGAAGACAGGACCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 90 bp | GAGTTTTCTCCTGAGGTCCTGTCTTCAAGGCATTTCGGTCTCTCCTaGGTGCTCTGGCGAGGCTGTACTTTCCCACGCCCTGAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EFSPEVLSSRHFGLS*VLWRGCTFPRPESS Trigger: GCTGCTCTCAGGGCGTGGGAAAGTACAGCCTCGCCAGAGCACCAAGGAGAGACCGAAATGCCTTGAAGACAGGACCTCAGGAGAAAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS GCA 72 bp | AGGTCCTGTCTTCAAGGCATTTCGGTCTCTCCTTGGTaGTCTGGCGAGGCTGTACTTTCCCACGCCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSCLQGISVSPW*SGEAVLSHALR Trigger: TCTCAGGGCGTGGGAAAGTACAGCCTCGCCAGAGCACCAAGGAGAGACCGAAATGCCTTGAAGACAGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS GCA 72 bp | GTTCCGGTGGGCCAAGCTGATTTTCGGGCATATCCATaGTCTCACCTCGGCTTGGTTCCAGTGCCAGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPVGQADFRAYP*SHLGLVPVPDP Trigger: TGGATCTGGCACTGGAACCAAGCCGAGGTGAGAGCATGGATATGCCCGAAAATCAGCTTGGCCCACCGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | GCCGTGCCATCAACCTGGGCCTCAGCCCTCAGCTTATaGTGGTCATTGTGTACACTGAGGTTCTGTGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AVPSTWASALSL*WSLCTLRFCGE Trigger: CTCACCACAGAACCTCAGTGTACACAATGACCACCATAAGCTGAGGGCTGAGGCCCAGGTTGATGGCACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | AGCAGCTGGTCACAACTGTTGGCCGTGCCATCAACCTaGGCCTCAGCCCTCAGCTTATGGTGGTCATTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSWSQLLAVPST*ASALSLWWSLC Trigger: ACACAATGACCACCATAAGCTGAGGGCTGAGGCCCAGGTTGATGGCACGGCCAACAGTTGTGACCAGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | TGGGGACAACACTGTAGGGCACTCTGTCAGCTGTCCTaGCACGGTAGGAAGCATCCCACTGTGTTTCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WGQHCRALCQLS*HGRKHPTVFLH Trigger: GTGCAGAAACACAGTGGGATGCTTCCTACCGTGCCAGGACAGCTGACAGAGTGCCCTACAGTGTTGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | ACACAGACCGAGGATCTGCTGACAGCACAGCCTCAATaGCACGCTTGGCTTCCTCTGCGGAGTGGAAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: TQTEDLLTAQPQ*HAWLPLRSGST Trigger: AGTACTTCCACTCCGCAGAGGAAGCCAAGCGTGCCATTGAGGCTGTGCTGTCAGCAGATCCTCGGTCTGTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | GTGCCATCAACCTGGGCCTCAGCCCTCAGCTTATGGTaGTCATTGTGTACACTGAGGTTCTGTGGTGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VPSTWASALSLW*SLCTLRFCGES Trigger: CGACTCACCACAGAACCTCAGTGTACACAATGACCACCATAAGCTGAGGGCTGAGGCCCAGGTTGATGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | GCTCCCCGGCAGGACCAAGGCACCTTCTACTTTCCTTaGTCTATCTGTGCCTTCTTCCAGAAAGCTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: APRQDQGTFYFP*SICAFFQKALQ Trigger: CTGAAGAGCTTTCTGGAAGAAGGCACAGATAGACCAAGGAAAGTAGAAGGTGCCTTGGTCCTGCCGGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 72 bp | CGAGGATCTGCTGACAGCACAGCCTCAATGGCACGCTaGGCTTCCTCTGCGGAGTGGAAGTACTTAAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: RGSADSTASMAR*ASSAEWKYLND Trigger: GTCATTTAAGTACTTCCACTCCGCAGAGGAAGCCAAGCGTGCCATTGAGGCTGTGCTGTCAGCAGATCCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 90 bp | TTTCTGCACTGCTCCCCGGCAGGACCAAGGCACCTTCTACTTTCCTaGGTCTATCTGTGCCTTCTTCCAGAAAGCTCTTCAGTTCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FLHCSPAGPRHLLLS*VYLCLLPESSSVPV Trigger: CACCGGAACTGAAGAGCTTTCTGGAAGAAGGCACAGATAGACCAAGGAAAGTAGAAGGTGCCTTGGTCCTGCCGGGGAGCAGTGCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS TCA 72 bp | TCTTCCAGAAAGCTCTTCAGTTCCGGTGGGCCAAGCTaGTTTTCGGGCATATCCATGCTCTCACCTCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSRKLFSSGGPS*FSGISMLSPRL Trigger: AAGCCGAGGTGAGAGCATGGATATGCCCGAAAATCAGCTTGGCCCACCGGAACTGAAGAGCTTTCTGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS GCA 72 bp | GGACCAAGGCACCTTCTACTTTCCTTGGTCTATCTGTaGCTTCTTCCAGAAAGCTCTTCAGTTCCGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPRHLLLSLVYL*LLPESSSVPVG Trigger: GCCCACCGGAACTGAAGAGCTTTCTGGAAGAAGGCACAGATAGACCAAGGAAAGTAGAAGGTGCCTTGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | GATCTTCAAACAGGCTCTGGAGTGGCTACAGATGGATaGCTGCCTTGGAGTGCCAATCTTGGCTGGGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: DLQTGSGVATDG*LPWSANLGWET Trigger: TGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCACTCCAGAGCCTGTTTGAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 72 bp | AACAGGCTCTGGAGTGGCTACAGATGGATGGCTGCCTaGGAGTGCCAATCTTGGCTGGGAAACATGATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NRLWSGYRWMAA*ECQSWLGNMIP Trigger: TGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCACTCCAGAGCCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 72 bp | TGCTCCCCGGCAGGACCAAGGCACCTTCTACTTTCCTaGGTCTATCTGTGCCTTCTTCCAGAAAGCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSPAGPRHLLLS*VYLCLLPESSS Trigger: TGAAGAGCTTTCTGGAAGAAGGCACAGATAGACCAAGGAAAGTAGAAGGTGCCTTGGTCCTGCCGGGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 90 bp | TTGGAGTGCCAATCTTGGCTGGGAAACATGATTCCAAGTACCCTATaGGCTCAGTTAAAAGATTCCCTGCCTCCAGGGCCGGCTGAACGC | + |
|
Preference number: 6 (lower is better) Translates to: LECQSWLGNMIPSTL*AQLKDSLPPGPAER Trigger: GCGTTCAGCCGGCCCTGGAGGCAGGGAATCTTTTAACTGAGCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 |
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| CDS CAA 90 bp | TTGGAGTGCCAATCTTGGCTGGGAAACATGATTCCAAGTACCCTATaGGCTCAGTTAAAAGATTCCCTCCAGGGCCGGCTGAACGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LECQSWLGNMIPSTL*AQLKDSLQGRLNAP Trigger: GGGTGCGTTCAGCCGGCCCTGGAGGGAATCTTTTAACTGAGCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
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| CDS TCA 72 bp | CCTCAGCCCTCAGCTTATGGTGGTCATTGTGTACACTaGGGTTCTGTGGTGAGTCGTAGTCAGCAATGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQPSAYGGHCVH*GSVVSRSQQCR Trigger: CCTACATTGCTGACTACGACTCACCACAGAACCTCAGTGTACACAATGACCACCATAAGCTGAGGGCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS GCA 72 bp | TTCAAACAGGCTCTGGAGTGGCTACAGATGGATGGCTaGCTTGGAGTGCCAATCTTGGCTGGGAAACATGAT | + |
|
Preference number: 6 (lower is better) Translates to: FKQALEWLQMDG*LGVPILAGKHD Trigger: ATCATGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCACTCCAGAGCCTGTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | GGCTACAGATGGATGGCTGCCTTGGAGTGCCAATCTTaGCTGGGAAACATGATTCCAAGTACCCTATTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GYRWMAALECQS*LGNMIPSTLLA Trigger: AGCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CCA 72 bp | ATCTGTGCCTTCTTCCAGAAAGCTCTTCAGTTCCGGTaGGCCAAGCTGATTTTCGGGCATATCCATGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ICAFFQKALQFR*AKLIFGHIHAL Trigger: GAGAGCATGGATATGCCCGAAAATCAGCTTGGCCCACCGGAACTGAAGAGCTTTCTGGAAGAAGGCACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 72 bp | TGGCTACAGATGGATGGCTGCCTTGGAGTGCCAATCTaGGCTGGGAAACATGATTCCAAGTACCCTATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WLQMDGCLGVPI*AGKHDSKYPIG Trigger: GCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 90 bp | GCTCTGGAGTGGCTACAGATGGATGGCTGCCTTGGAGTGCCAATCTaGGCTGGGAAACATGATTCCAAGTACCCTATTGGCTCAGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALEWLQMDGCLGVPI*AGKHDSKYPIGSVK Trigger: TTTAACTGAGCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTGGCACTCCAAGGCAGCCATCCATCTGTAGCCACTCCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS TCA 72 bp | TCTCCTGAATTGAGCTTCCTCAGATCCATCTCTGCGTaGGGAGTAAACCGGACTTGTAAAGGGGCTACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPELSFLRSISA*GVNRTCKGATG Trigger: TCCTGTAGCCCCTTTACAAGTCCGGTTTACTCCTCACGCAGAGATGGATCTGAGGAAGCTCAATTCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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| CDS CAA 72 bp | CAATCTTGGCTGGGAAACATGATTCCAAGTACCCTATaGGCTCAGTTAAAAGATTCCCTGCCTCCAGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QSWLGNMIPSTL*AQLKDSLPPGP Trigger: CGGCCCTGGAGGCAGGGAATCTTTTAACTGAGCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 |
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| CDS CAA 72 bp | CAATCTTGGCTGGGAAACATGATTCCAAGTACCCTATaGGCTCAGTTAAAAGATTCCCTCCAGGGCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QSWLGNMIPSTL*AQLKDSLQGRL Trigger: CAGCCGGCCCTGGAGGGAATCTTTTAACTGAGCCAATAGGGTACTTGGAATCATGTTTCCCAGCCAAGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151903.8 |
||
| CDS GCA 72 bp | AGTCAGCAATGTAGGGCTTTATGTCTAGCACAGGTGTaGCGTCTATCATGTCAACTCCAGACAGGTAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SQQCRALCLAQV*RLSCQLQTGRQ Trigger: CTGTCTACCTGTCTGGAGTTGACATGATAGACGGCACACCTGTGCTAGACATAAAGCCCTACATTGCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030015.6 ENSMUST00000086563.11 ENSMUST00000151903.8 |
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