Pregenerated sensors for TRIP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032386Ensembl transcript IDs: ENSMUST00000117083.2, ENSMUST00000119245.8, ENSMUST00000122410.8, ENSMUST00000179395.8
Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGAGAGGCTTCGGCAGGAGGATTGTTGTGAGTTCCAGGCAAGCCTaGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: LRGFGRRIVVSSRQA*VTECGLVSRCQKQN Trigger: GTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGGCTTGCCTGGAACTCACAACAATCCTCCTGCCGAAGCCTCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR GCA 90 bp | CGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATaGTATGCAACAGGCAGTTCACAGTCGAGTGAACATCAATGTGGA | + |
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Preference number: 1 (lower is better) Translates to: RVSLGIQSDQPPKNQ*YATGSSQSSEHQCG Trigger: TCCACATTGATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CCA 90 bp | TCTGCAGGCTGCATGGATCCCTTGTTGCTGTTGGAGCCTTCCATGTaGATCACCTCCTCCCAAACACATTCACAGACACTGAGAATAGCA | + |
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Preference number: 1 (lower is better) Translates to: SAGCMDPLLLLEPSM*ITSSQTHSQTLRIA Trigger: TGCTATTCTCAGTGTCTGTGAATGTGTTTGGGAGGAGGTGATCCACATGGAAGGCTCCAACAGCAACAAGGGATCCATGCAGCCTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR TCA 90 bp | ATCACTGGAACAAGAATCTGTTCGGGTTTCCCTGGGAATCCAGAGTaGTCAGCCTCCGAAGAACCAATGCTATGCAACAGGCAGTTCACA | + |
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Preference number: 1 (lower is better) Translates to: ITGTRICSGFPGNPE*SASEEPMLCNRQFT Trigger: TGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAACAGATTCTTGTTCCAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CCA 90 bp | CAGGAGGATTGTTGTGAGTTCCAGGCAAGCCTGGGTCACAGAATGTaGCCTGGTCTCAAGATGTCAAAAGCAGAACACTTGGTAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: QEDCCEFQASLGHRM*PGLKMSKAEHLVRT Trigger: TGTTCTTACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGGCTTGCCTGGAACTCACAACAATCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CCA 90 bp | ACTGCATGTGTACATCACTGGAACAAGAATCTGTTCGGGTTTCCCTaGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATGCAA | + |
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Preference number: 1 (lower is better) Translates to: TACVHHWNKNLFGFP*ESRVISLRRTNAMQ Trigger: TTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAACAGATTCTTGTTCCAGTGATGTACACATGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CCA 90 bp | GAGGTCCAACAGAACACGAGAGAGAATACTGCATGTGTACATCACTaGAACAAGAATCTGTTCGGGTTTCCCTGGGAATCCAGAGTGATC | + |
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Preference number: 1 (lower is better) Translates to: EVQQNTRENTACVHH*NKNLFGFPWESRVI Trigger: GATCACTCTGGATTCCCAGGGAAACCCGAACAGATTCTTGTTCCAGTGATGTACACATGCAGTATTCTCTCTCGTGTTCTGTTGGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CCA 90 bp | ACAAAAGTTATAAGAATCTGGTGTGGTGGTACAGACTCCAGCACTTaGGAGCTTGACGCTAGAGATCTAAAACTTAAGGCTAGGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: TKVIRIWCGGTDSST*ELDARDLKLKARPG Trigger: CCCAGGCCTAGCCTTAAGTTTTAGATCTCTAGCGTCAAGCTCCCAAGTGCTGGAGTCTGTACCACCACACCAGATTCTTATAACTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR TCA 90 bp | GCCTCCGAAGAACCAATGCTATGCAACAGGCAGTTCACAGTCGAGTaGACATCAATGTGGAATGAGTGGAGGCATTTCAATGCAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: ASEEPMLCNRQFTVE*TSMWNEWRHFNANK Trigger: TTTATTTGCATTGAAATGCCTCCACTCATTCCACATTGATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR GCA 90 bp | TTCCACTTTATACACAGAGGTCCAACAGAACACGAGAGAGAATACTaGATGTGTACATCACTGGAACAAGAATCTGTTCGGGTTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: FHFIHRGPTEHEREY*MCTSLEQESVRVSL Trigger: CAGGGAAACCCGAACAGATTCTTGTTCCAGTGATGTACACATGCAGTATTCTCTCTCGTGTTCTGTTGGACCTCTGTGTATAAAGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR TCA 90 bp | AGAGCACACACATTTGAGACCATGAATTTCCTAGGCTCCAGCAACTaGGATTCCAATAGCACTTTAGAAGAGCCTCAGAAACAAGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RAHTFETMNFLGSSN*DSNSTLEEPQKQVL Trigger: AAGCACTTGTTTCTGAGGCTCTTCTAAAGTGCTATTGGAATCTCAGTTGCTGGAGCCTAGGAAATTCATGGTCTCAAATGTGTGTGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR TCA 90 bp | CTCATCAACGCTGACAAAGCCCATAGTTTCCATCATTCCCTACTGTaGGCTCATACAAAGGAAACTGAGTCTTGTCTGGGAAAAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: LINADKAHSFHHSLL*AHTKETESCLGKTK Trigger: TTTTGTTTTTCCCAGACAAGACTCAGTTTCCTTTGTATGAGCTCACAGTAGGGAATGATGGAAACTATGGGCTTTGTCAGCGTTGATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR GCA 90 bp | ACCTCCTCCCAAACACATTCACAGACACTGAGAATAGCAGATGTGTaGTTGCTATTTGAATCGCAAGGAAGAAAATATCCTTTCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TSSQTHSQTLRIADV*LLFESQGRKYPFSL Trigger: CAGAGAGAAAGGATATTTTCTTCCTTGCGATTCAAATAGCAAGCACACATCTGCTATTCTCAGTGTCTGTGAATGTGTTTGGGAGGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR CCA 90 bp | ACAGTTTCCCTGGCTGTAGCCAAGCTTTCTTGCTCACATTATCTATaGGTGTATTTGCAGTACCACAGCACAGCTGAATGGTTTATAAAA | + |
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Preference number: 1 (lower is better) Translates to: TVSLAVAKLSCSHYL*VYLQYHSTAEWFIK Trigger: TTTTATAAACCATTCAGCTGTGCTGTGGTACTGCAAATACACCCATAGATAATGTGAGCAAGAAAGCTTGGCTACAGCCAGGGAAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR CCA 90 bp | AAGAGAATCTCAAGTTTTGACTTCTTGTATCTCGAGAGCAAGAATTaGCAAACTAGTAGCCCAAAGAACAAATCAGATTCACTACCACGT | + |
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Preference number: 1 (lower is better) Translates to: KRISSFDFLYLESKN*QTSSPKNKSDSLPR Trigger: ACGTGGTAGTGAATCTGATTTGTTCTTTGGGCTACTAGTTTGCCAATTCTTGCTCTCGAGATACAAGAAGTCAAAACTTGAGATTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR CAA 90 bp | CAACTGAGGGCCATCTACCCGCAAACTTCTCCCACACTTCCTCCCTaGTGTCTCAGCAAACAGAAGAGAGACCTTATACTACCACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: QLRAIYPQTSPTLPP*CLSKQKRDLILPLP Trigger: TGGCAGTGGTAGTATAAGGTCTCTCTTCTGTTTGCTGAGACACAAGGGAGGAAGTGTGGGAGAAGTTTGCGGGTAGATGGCCCTCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CAA 90 bp | AGGCGAAAAGTAGAAAAGCTCTCTGCAGGCTGCATGGATCCCTTGTaGCTGTTGGAGCCTTCCATGTGGATCACCTCCTCCCAAACACAT | + |
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Preference number: 2 (lower is better) Translates to: RRKVEKLSAGCMDPL*LLEPSMWITSSQTH Trigger: ATGTGTTTGGGAGGAGGTGATCCACATGGAAGGCTCCAACAGCAACAAGGGATCCATGCAGCCTGCAGAGAGCTTTTCTACTTTTCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR CAA 90 bp | TACAGGCGAAAAGTAGAAAAGCTCTCTGCAGGCTGCATGGATCCCTaGTTGCTGTTGGAGCCTTCCATGTGGATCACCTCCTCCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: YRRKVEKLSAGCMDP*LLLEPSMWITSSQT Trigger: TGTTTGGGAGGAGGTGATCCACATGGAAGGCTCCAACAGCAACAAGGGATCCATGCAGCCTGCAGAGAGCTTTTCTACTTTTCGCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATTCAGAGATTGAAGCCTaGTGCCCAGCCTTTTCGCTT | + |
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Preference number: 2 (lower is better) Translates to: VRVSLGIQSDQPPKNQCYSEIEA*CPAFSL Trigger: AAGCGAAAAGGCTGGGCACCAGGCTTCAATCTCTGA...ATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CAA 90 bp | AAAGTAGAAAAGCTCTCTGCAGGCTGCATGGATCCCTTGTTGCTGTaGGAGCCTTCCATGTGGATCACCTCCTCCCAAACACATTCACAG | + |
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Preference number: 2 (lower is better) Translates to: KVEKLSAGCMDPLLL*EPSMWITSSQTHSQ Trigger: CTGTGAATGTGTTTGGGAGGAGGTGATCCACATGGAAGGCTCCAACAGCAACAAGGGATCCATGCAGCCTGCAGAGAGCTTTTCTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTTGGTTCAGAGATTGAAGCCTaGTGCCCAGCCTTTTCGCTT | + |
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Preference number: 2 (lower is better) Translates to: PGSQNVAWSQDVKSRTLGSEIEA*CPAFSL Trigger: AAGCGAAAAGGCTGGGCACCAGGCTTCAATCTCTGA...ACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAGCCTGGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACCTTTTCGCTTTCTACTaGTTCAATCCCAAAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: RQAWVTECGLVSRCQKQNLFAFY*FNPKGP Trigger: TGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAG...GTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGGCTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR CCA 90 bp | GGAATTCTAGCTTTCCACTCTGAGAGATTTGGGTTAGAAGCTGAGCATGGGGCTCTGGGTCACAGAATGTaGCCTGGTCTCAAGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: GILAFHSERFGLEAEHGALGHRM*PGLKMS Trigger: TGACATCTTGAGACCAGGCCACATTCTGTGACCCAG...AGCCCCATGCTCAGCTTCTAACCCAAATCTCTCAGAGTGGAAAGCTAGAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CAA 90 bp | AACCAAAGCCATTTGCTGTCTGACCCTTATGGAATTGGAATGACTTaGCTAACCCCTGCCCCCTGCTGTTCAGAAGTCTCTAGCCACATA | + |
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Preference number: 2 (lower is better) Translates to: NQSHLLSDPYGIGMT*LTPAPCCSEVSSHI Trigger: TATGTGGCTAGAGACTTCTGAACAGCAGGGGGCAGGGGTTAGCAAAGTCATTCCAATTCCATAAGGGTCAGACAGCAAATGGCTTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR-3UTR TCA 90 bp | CAATGCTATGCAACAGGCAGTTCACAGTCGAGTGAACATCAATGTGGAATGAGTATTTGGGTTAGAAGCTaGGCATGGGGCTACTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: QCYATGSSQSSEHQCGMSIWVRS*AWGYWP Trigger: AGGCCAGTAGCCCCATGCTCAGCTTCTAACCCAAAT...ACTCATTCCACATTGATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGATCAGCCTCCGAAGAACCAATGCTATGCAACAGGCAGTTCACAGTCGAAGCCTCAGAAACAAGTaGTTCCTGAGAAGGGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: RVISLRRTNAMQQAVHSRSLRNK*FLRRAK Trigger: TTTAGCCCTTCTCAGGAAGCACTTGTTTCTGAGGCT...TCGACTGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCATTAGCAGGTAGCTCCCTCACTTCCCAGACTAACCCATGTTCTCAAACTTCACAGAATGTGGCCTaGTCTCAAGATGTCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: AALAGSSLTSQTNPCSQTSQNVA*SQDVKS Trigger: GCTTTTGACATCTTGAGACCAGGCCACATTCTGTGA...AGTTTGAGAACATGGGTTAGTCTGGGAAGTGAGGGAGCTACCTGCTAATGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAGTGCTTCCTGAGAAGGGCTAAAGGGACCAGTGAAAAATCTCACTTCAAAAGTTCCAGGCAAGCCTaGGTCACAGAATGTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NKCFLRRAKGTSEKSHFKSSRQA*VTECGL Trigger: CAGGCCACATTCTGTGACCCAGGCTTGCCTGGAACT...TTTGAAGTGAGATTTTTCACTGGTCCCTTTAGCCCTTCTCAGGAAGCACTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAACAAGCTATTCTTGGACAAGCTTGAACTCAGGCTACTAAGAATTTCCATCATTTGGGTTAGAAGCTaGGCATGGGGCTACTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TNKLFLDKLELRLLRISIIWVRS*AWGYWP Trigger: AGGCCAGTAGCCCCATGCTCAGCTTCTAACCCAAAT...GATGGAAATTCTTAGTAGCCTGAGTTCAAGCTTGTCCAAGAATAGCTTGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGAAGAGAGACCTTATACTACCACTGCCATGTAAACCAAAGACAGACTTTCTTCTGGCTGTGTGTTTaGGAAGCTGAGGTGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: NRRETLYYHCHVNQRQTFFWLCV*EAEVGS Trigger: AGAACCCACCTCAGCTTCTCAAACACACAGCCAGAA...GAAAGTCTGTCTTTGGTTTACATGGCAGTGGTAGTATAAGGTCTCTCTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CAA 90 bp | CTGGCTGTAGCCAAGCTTTCTTGCTCACATTATCTATGGGTGTATTaGCAGTACCACAGCACAGCTGAATGGTTTATAAAACCAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LAVAKLSCSHYLWVY*QYHSTAEWFIKPKP Trigger: TGGCTTTGGTTTTATAAACCATTCAGCTGTGCTGTGGTACTGCAAATACACCCATAGATAATGTGAGCAAGAAAGCTTGGCTACAGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR-3UTR TCA 90 bp | AACAAGTGCTTCCTGAGAAGGGCTAAAGGGACCAGTGAAAAATCTCACTTCAAATCTAGCTTTCCACTCTaGGAGATTTGGGTTAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: NKCFLRRAKGTSEKSHFKSSFPL*EIWVRS Trigger: GCTTCTAACCCAAATCTCTCAGAGTGGAAAGCTAGA...TTTGAAGTGAGATTTTTCACTGGTCCCTTTAGCCCTTCTCAGGAAGCACTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAATGAAGCCACATTGTATTCACACATGCAAATGGACGTTTATCCAAGTTCATCAGAGATTGAAGCCTaGTGCCCAGCCTTTTCGCTT | + |
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Preference number: 2 (lower is better) Translates to: LNEATLYSHMQMDVYPSSSEIEA*CPAFSL Trigger: AAGCGAAAAGGCTGGGCACCAGGCTTCAATCTCTGA...TGAACTTGGATAAACGTCCATTTGCATGTGTGAATACAATGTGGCTTCATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR-3UTR GCA 90 bp | AACAGAAGAGAGACCTTATACTACCACTGCCATGTAAACCAAAGACAGACTTTCCTTTTCGCTTTCTACTaGTTCAATCCCAAAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: NRRETLYYHCHVNQRQTFLFAFY*FNPKGP Trigger: TGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAG...GAAAGTCTGTCTTTGGTTTACATGGCAGTGGTAGTATAAGGTCTCTCTTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGGAACACAGAAGCTACAACAAAAAGGCATCTCGGAAATTCAGAACTTTCGGGTTCTTAGAAACTTaGAAAGCTCGGGCAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: KREHRSYNKKASRKFRTFGFLET*KARADE Trigger: CTCATCTGCCCGAGCTTTGCAAGTTTCTAAGAACCC...GAAAGTTCTGAATTTCCGAGATGCCTTTTTGTTGTAGCTTCTGTGTTCCCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR CAA 90 bp | TCCTCCCAAACACATTCACAGACACTGAGAATAGCAGATGTGTGCTaGCTATTTGAATCGCAAGGAAGAAAATATCCTTTCTCTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SSQTHSQTLRIADVC*LFESQGRKYPFSLD Trigger: ATCCAGAGAGAAAGGATATTTTCTTCCTTGCGATTCAAATAGCAAGCACACATCTGCTATTCTCAGTGTCTGTGAATGTGTTTGGGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR CAA 90 bp | GGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTaGGTAAGAACATTCTCATTTCACCATAGGCTTATGTTAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: GHRMWPGLKMSKAEH*VRTFSFHHRLMLNK Trigger: TTTGTTTAACATAAGCCTATGGTGAAATGAGAATGTTCTTACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTTATACACAGAGGTCCAACAGAACACGAGAGAGAATACTGCATGTGTACATCAATGTGGAATGAGTaGAGGCATTTCAATGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: HFIHRGPTEHEREYCMCTSMWNE*RHFNAN Trigger: ATTTGCATTGAAATGCCTCCACTCATTCCACATTGA...TGTACACATGCAGTATTCTCTCTCGTGTTCTGTTGGACCTCTGTGTATAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAATGAAGCCACATTGTATTCACACATGCAAATGGACGTTTATCCAAGTTCAATTGTCCCATCTACATaGTGCTTTTGCAACACTAAC | + |
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Preference number: 2 (lower is better) Translates to: LNEATLYSHMQMDVYPSSIVPST*CFCNTN Trigger: GTTAGTGTTGCAAAAGCATCATGTAGATGGGACAAT...TGAACTTGGATAAACGTCCATTTGCATGTGTGAATACAATGTGGCTTCATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCATCTAATCTTGGCTAGGCCCCACACAACATTAAACAAATCTTCTAAATTATTTGAGAAGCTGAGGTaGGTTCTTAGAAACTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: CHLILARPHTTLNKSSKLFEKLR*VLRNLQ Trigger: TTGCAAGTTTCTAAGAACCCACCTCAGCTTCTCAAA...TAATTTAGAAGATTTGTTTAATGTTGTGTGGGGCCTAGCCAAGATTAGATGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR CCA 72 bp | AGCTCTCTGCAGGCTGCATGGATCCCTTGTTGCTGTTaGAGCCTTCCATGTGGATCACCTCCTCCCAAACAC | + |
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Preference number: 3 (lower is better) Translates to: SSLQAAWIPCCC*SLPCGSPPPKH Trigger: GTGTTTGGGAGGAGGTGATCCACATGGAAGGCTCCAACAGCAACAAGGGATCCATGCAGCCTGCAGAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR GCA 72 bp | CTCTACAGGCGAAAAGTAGAAAAGCTCTCTGCAGGCTaGATGGATCCCTTGTTGCTGTTGGAGCCTTCCATG | + |
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Preference number: 3 (lower is better) Translates to: LYRRKVEKLSAG*MDPLLLLEPSM Trigger: CATGGAAGGCTCCAACAGCAACAAGGGATCCATGCAGCCTGCAGAGAGCTTTTCTACTTTTCGCCTGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR CCA 72 bp | TGCATGGATCCCTTGTTGCTGTTGGAGCCTTCCATGTaGATCACCTCCTCCCAAACACATTCACAGACACTG | + |
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Preference number: 3 (lower is better) Translates to: CMDPLLLLEPSM*ITSSQTHSQTL Trigger: CAGTGTCTGTGAATGTGTTTGGGAGGAGGTGATCCACATGGAAGGCTCCAACAGCAACAAGGGATCCATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
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| 3UTR TCA 72 bp | GCTGATTTCTCTAGTTTAGTAGCTGAGCTGGTCAAGTaGACAGCCCCATGCCATCTAATCTTGGCTAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ADFSSLVAELVK*TAPCHLILARP Trigger: GGGCCTAGCCAAGATTAGATGGCATGGGGCTGTTCACTTGACCAGCTCAGCTACTAAACTAGAGAAATCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR GCA 72 bp | CTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATaGTATGCAACAGGCAGTTCACAGTCGAGTGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: LGIQSDQPPKNQ*YATGSSQSSEH Trigger: ATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR CCA 72 bp | GTACATCACTGGAACAAGAATCTGTTCGGGTTTCCCTaGGAATCCAGAGTGATCAGCCTCCGAAGAACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VHHWNKNLFGFP*ESRVISLRRTN Trigger: ATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAACAGATTCTTGTTCCAGTGATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATGTGGTTCTGGCTGTGTGTTTGAGAAGCTGAGGTGGGTTCTTAGAAACTTGCAAGCACACAAACTGTaGGAGGGAGTCCAACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: LCGSGCVFEKLRWVLRNLQAHKL*EGVQHP Trigger: GGGATGTTGGACTCCCTCCAACAGTTTGTGTGCTTG...CAAGTTTCTAAGAACCCACCTCAGCTTCTCAAACACACAGCCAGAACCACATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGCCCATAGTTTCCATCATTCCCTACTGTGAGCTCATACAAAGGAAACTGCAAGCACACAAACTGTaGGAGGGAGTCCAACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: TKPIVSIIPYCELIQRKLQAHKL*EGVQHP Trigger: GGGATGTTGGACTCCCTCCAACAGTTTGTGTGCTTG...CAGTTTCCTTTGTATGAGCTCACAGTAGGGAATGATGGAAACTATGGGCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR CCA 72 bp | CAGAACACGAGAGAGAATACTGCATGTGTACATCACTaGAACAAGAATCTGTTCGGGTTTCCCTGGGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: QNTRENTACVHH*NKNLFGFPWES Trigger: GGATTCCCAGGGAAACCCGAACAGATTCTTGTTCCAGTGATGTACACATGCAGTATTCTCTCTCGTGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | GCTGACAAAGCCCATAGTTTCCATCATTCCCTACTGTaGGCTCATACAAAGGAAACTGAGTCTTGTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ADKAHSFHHSLL*AHTKETESCLG Trigger: TCCCAGACAAGACTCAGTTTCCTTTGTATGAGCTCACAGTAGGGAATGATGGAAACTATGGGCTTTGTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | CAAATGCTAGGACTAAAGGCATACAACCACCATGCCTaGCTAGACTCTTCTGAAGTCTTACGCAGTGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: QMLGLKAYNHHA*LDSSEVLRSDV Trigger: CACATCACTGCGTAAGACTTCAGAAGAGTCTAGTCAGGCATGGTGGTTGTATGCCTTTAGTCCTAGCATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | GAACCAATGCTATGCAACAGGCAGTTCACAGTCGAGTaGACATCAATGTGGAATGAGTGGAGGCATTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: EPMLCNRQFTVE*TSMWNEWRHFN Trigger: ATTGAAATGCCTCCACTCATTCCACATTGATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | TTTATTTATGTGGTTCTGGCTGTGTGTTTGAGAAGCTaGGGTGGGTTCTTAGAAACTTGCAAAGCTCGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FIYVVLAVCLRS*GGFLETCKARA Trigger: TGCCCGAGCTTTGCAAGTTTCTAAGAACCCACCTCAGCTTCTCAAACACACAGCCAGAACCACATAAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | TCTGACTTTAAAGTATACTATTCATCAGTGAGCAACTaGGGGCCATCTACCCGCAAACTTCTCCCACACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SDFKVYYSSVSN*GPSTRKLLPHF Trigger: GAAGTGTGGGAGAAGTTTGCGGGTAGATGGCCCTCAGTTGCTCACTGATGAATAGTATACTTTAAAGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR GCA 72 bp | ATACACAGAGGTCCAACAGAACACGAGAGAGAATACTaGATGTGTACATCACTGGAACAAGAATCTGTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: IHRGPTEHEREY*MCTSLEQESVR Trigger: CCGAACAGATTCTTGTTCCAGTGATGTACACATGCAGTATTCTCTCTCGTGTTCTGTTGGACCTCTGTGTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR GCA 72 bp | CTACAAACAGTTTCCCTGGCTGTAGCCAAGCTTTCTTaGTCACATTATCTATGGGTGTATTTGCAGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LQTVSLAVAKLS*SHYLWVYLQYH Trigger: GTGGTACTGCAAATACACCCATAGATAATGTGAGCAAGAAAGCTTGGCTACAGCCAGGGAAACTGTTTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | TCACACATGCAAATGGACGTTTATCCAAGTTCATTGTaGCGTAGGATGGTACTGTTCTTTTTCCTCTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SHMQMDVYPSSL*RRMVLFFFLYR Trigger: CCTGTAGAGGAAAAAGAACAGTACCATCCTACGTCACAATGAACTTGGATAAACGTCCATTTGCATGTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | ACAGACACTGAGAATAGCAGATGTGTGCTTGCTATTTaGATCGCAAGGAAGAAAATATCCTTTCTCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TDTENSRCVLAI*IARKKISFLSG Trigger: TCCAGAGAGAAAGGATATTTTCTTCCTTGCGATTCAAATAGCAAGCACACATCTGCTATTCTCAGTGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | TTATCTATGGGTGTATTTGCAGTACCACAGCACAGCTaGATGGTTTATAAAACCAAAGCCATTTGCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSMGVFAVPQHS*MVYKTKAICCL Trigger: CAGACAGCAAATGGCTTTGGTTTTATAAACCATTCAGCTGTGCTGTGGTACTGCAAATACACCCATAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR GCA 72 bp | CAAACACATTCACAGACACTGAGAATAGCAGATGTGTaGTTGCTATTTGAATCGCAAGGAAGAAAATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: QTHSQTLRIADV*LLFESQGRKYP Trigger: AGGATATTTTCTTCCTTGCGATTCAAATAGCAAGCACACATCTGCTATTCTCAGTGTCTGTGAATGTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR CCA 72 bp | TCAAGTTTTGACTTCTTGTATCTCGAGAGCAAGAATTaGCAAACTAGTAGCCCAAAGAACAAATCAGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSFDFLYLESKN*QTSSPKNKSDS Trigger: TGAATCTGATTTGTTCTTTGGGCTACTAGTTTGCCAATTCTTGCTCTCGAGATACAAGAAGTCAAAACTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR TCA 72 bp | GAAATTCAACATCTGATCAATTTACATTTCATCTCCTaGATGAAGCCACATTGTATTCACACATGCAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: EIQHLINLHFIS*MKPHCIHTCKW Trigger: CCATTTGCATGTGTGAATACAATGTGGCTTCATTCAGGAGATGAAATGTAAATTGATCAGATGTTGAATTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGAAGGCAATCACACGGGTaGCGACCAGGAAGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGRQSHG*RPGSRT Trigger: AGTCCTGCTTCCTGGTCGTCACCCGTGTGATTGCCT...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGAAGAGAAGCCCAGGGCTaGTGCATAGACAGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGREAQG*CIDRHQ Trigger: CTGGTGCCTGTCTATGCATCAGCCCTGGGCTTCTCT...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGAGGTAGCCTGGAGTTCTaGGACTTCCTGAGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGGSLEF*DFLRGR Trigger: CCTTCCCCTCAGGAAGTCTCAGAACTCCAGGCTACC...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACTTGAGAGGCTTCGGCAGGAGGATTGTTGTGAGTTCCAGGCAAGCCTGGGGTAGCCTGGAGTTCTaGGACTTCCTGAGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHLRGFGRRIVVSSRQAWGSLEF*DFLRGR Trigger: CCTTCCCCTCAGGAAGTCTCAGAACTCCAGGCTACC...CCAGGCTTGCCTGGAACTCACAACAATCCTCCTGCCGAAGCCTCTCAAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCGAACAAGCAGGGGCCTaGACCCTCCTGCTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPSLFAFYCFNPKGPADSEQAGA*TLLLTN Trigger: GTTTGTGAGCAGGAGGGTTCAGGCCCCTGCTTGTTC...GCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGAACAAGCAGGGGCCTaGACCCTCCTGCTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPGAQPFRFLLLQSQRPSEQAGA*TLLLTN Trigger: GTTTGTGAGCAGGAGGGTTCAGGCCCCTGCTTGTTC...GCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATGGTAGCCTGGAGTTCTaGGACTTCCTGAGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVPSLFAFYCFNPKGPADGSLEF*DFLRGR Trigger: CCTTCCCCTCAGGAAGTCTCAGAACTCCAGGCTACC...ATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCGTGTTGTCAACCCACTaGGGAGAGGCCTGGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: VPSLFAFYCFNPKGPADSVLSTH*GEAWYM Trigger: CATGTACCAGGCCTCTCCTCAGTGGGTTGACAACAC...GCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACTTGAGAGGCTTCGGCAGGAGGATTGTTGTGAGTTCCAGGCAAGCCTGGATGAGTTTGTGCTTCTaGCCCAGGCAATCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHLRGFGRRIVVSSRQAWMSLCF*PRQSHG Trigger: CCCGTGTGATTGCCTGGGCCAGAAGCACAAACTCAT...CCAGGCTTGCCTGGAACTCACAACAATCCTCCTGCCGAAGCCTCTCAAGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATCTCTGCCCCTGACATaGGCTTCTTCAGCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGSLPLT*ASSAVS Trigger: AGAAACTGCTGAAGAAGCTCATGTCAGGGGCAGAGA...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCAGAAGTCTCTGCCCCTaGCATGAGCTTCTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPSLFAFYCFNPKGPADSRSLCP*HELLQQ Trigger: CTGCTGAAGAAGCTCATGTCAGGGGCAGAGACTTCT...GCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCCTTCTTCTGTGGGGTTaGGCCAGTGTTGTCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPGAQPFRFLLLQSQRPSLLLWG*ASVVNP Trigger: TGGGTTGACAACACTGGCTCAACCCCACAGAAGAAG...GCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATTTGCAACTGCTGTGTaGACCAGTGTACTAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGFATAV*TSVLAA Trigger: AGCCGCTAGTACACTGGTGCACACAGCAGTTGCAAA...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATACCAGGAAGCAGGACTaGAAGTTTGTCCTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPSLFAFYCFNPKGPADTRKQD*KFVLSL Trigger: GAGGGACAGGACAAACTTGCAGTCCTGCTTCCTGGT...ATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGAGGGGAAGGTCTTTTaGCCGTGGCTGCTATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPGAQPFRFLLLQSQRPSEGKVF*PWLLSK Trigger: TTTGGATAGCAGCCACGGGCAAAAGACCTTCCCCTC...GCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGATGAGTTTGTGCTTCTaGCCCAGGCAATCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: EAWCPAFSLSTASIPKAQMSLCF*PRQSHG Trigger: CCCGTGTGATTGCCTGGGCCAGAAGCACAAACTCAT...CTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTTGGTAGGCAATCACACGGGTaGCGACCAGGAAGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGSQNVAWSQDVKSRTLGRQSHG*RPGSRT Trigger: AGTCCTGCTTCCTGGTCGTCACCCGTGTGATTGCCT...ACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACTTGAGAGGCTTCGGCAGGAGGATTGTTGTGAGTTCCAGGCAAGCCTGGCAAAGTCTTCCTCTGTaGGGAGTATACCAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHLRGFGRRIVVSSRQAWQSLPL*GVYQDL Trigger: CAGATCCTGGTATACTCCTCACAGAGGAAGACTTTG...CCAGGCTTGCCTGGAACTCACAACAATCCTCCTGCCGAAGCCTCTCAAGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCAAGTTCTGAGACTTCCTaGGGGGAAGGTCTTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CPAFSLSTASIPKAQRIASSETS*GEGLLP Trigger: GGGCAAAAGACCTTCCCCTCAGGAAGTCTCAGAACT...TGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGAGTCAGACTCTTGACTaGTGTCTGGGAACTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EAWCPAFSLSTASIPKAQSQTLD*CLGTAP Trigger: AGGAGCAGTTCCCAGACATCAGTCAAGAGTCTGACT...CTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGAAAGGTCTTTTGCCCGTaGCTGCTATCCAAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGKVFCP*LLSKVF Trigger: GAAGACTTTGGATAGCAGCCACGGGCAAAAGACCTT...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCATCTCTGCCCCTGACATaGGCTTCTTCAGCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPAFSLSTASIPKAQRIASLPLT*ASSAVS Trigger: AGAAACTGCTGAAGAAGCTCATGTCAGGGGCAGAGA...TGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GTTCGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATAGAAGTCTCTGCCCCTaGCATGAGCTTCTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRVSLGIQSDQPPKNQCYRSLCP*HELLQQ Trigger: CTGCTGAAGAAGCTCATGTCAGGGGCAGAGACTTCT...ATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTGATCAGCCTCCGAAGAACCAATGCTATGCAACAGGCAGTTCACAGTCGAGTGTTGTCAACCCACTaGGGAGAGGCCTGGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: RVISLRRTNAMQQAVHSRVLSTH*GEAWYM Trigger: CATGTACCAGGCCTCTCCTCAGTGGGTTGACAACAC...TCGACTGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATTGCCCTCATTTCCCTaGAGAAGGTCTGTCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGLPSFP*RRSVTY Trigger: ATATGTGACAGACCTTCTCCAGGGAAATGAGGGCAA...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCAATCTAAAGGTGTTTTaGCCTCCACAGCTACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPGAQPFRFLLLQSQRPSNLKVF*PPQLRQ Trigger: CTGACGTAGCTGTGGAGGTCAAAACACCTTTAGATT...GCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTTGGTAAGAGAACAAGCAGGGGCCTaGACCCTCCTGCTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHRMWPGLKMSKAEHLVREQAGA*TLLLTN Trigger: GTTTGTGAGCAGGAGGGTTCAGGCCCCTGCTTGTTC...TCTTACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCTTCTTCAGCAGTTTCTaGCTTTTGTTTGAGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KPGAQPFRFLLLQSQRPSFFSSF*LLFESR Trigger: GCGGGACTCAAACAAAAGTCAGAAACTGCTGAAGAA...GCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GTTCGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATTCTCTGCCCCTGACATaGGCTTCTTCAGCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVSLGIQSDQPPKNQCYSLPLT*ASSAVS Trigger: AGAAACTGCTGAAGAAGCTCATGTCAGGGGCAGAGA...ATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATCATCTAGTCTGCTGTaGTACTCTGCTAGTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGSSSLL*YSASGF Trigger: AAATCCACTAGCAGAGTATCACAGCAGACTAGATGA...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACTTGAGAGGCTTCGGCAGGAGGATTGTTGTGAGTTCCAGGCAAGCCTGGTCATCTAGTCTGCTGTaGTACTCTGCTAGTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QHLRGFGRRIVVSSRQAWSSSLL*YSASGF Trigger: AAATCCACTAGCAGAGTATCACAGCAGACTAGATGA...CCAGGCTTGCCTGGAACTCACAACAATCCTCCTGCCGAAGCCTCTCAAGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGCCTGGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACATCCAACGTGACCAGTaGCTGGTTCAAAGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RQAWVTECGLVSRCQKQNIQRDQ*LVQSPT Trigger: AGTGGGACTTTGAACCAGTCACTGGTCACGTTGGAT...GTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGGCTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTAGAGAAGCCCAGGGCTaGTGCATAGACAGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPADSTLVHKTPLCCIVPREAQG*CIDRHQ Trigger: CTGGTGCCTGTCTATGCATCAGCCCTGGGCTTCTCT...AGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTCAAAGTCTTCCTCTGTaGGGAGTATACCAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFAFYCFNPKGPADSTQSLPL*GVYQDL Trigger: CAGATCCTGGTATACTCCTCACAGAGGAAGACTTTG...AGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATGCACAAAGTCTTCCTCTGTaGGGAGTATACCAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVSLGIQSDQPPKNQCYAQSLPL*GVYQDL Trigger: CAGATCCTGGTATACTCCTCACAGAGGAAGACTTTG...TGCATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTGGTAGCCTGGAGTTCTaGGACTTCCTGAGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPKGPADSTLVHKTPLCCGSLEF*DFLRGR Trigger: CCTTCCCCTCAGGAAGTCTCAGAACTCCAGGCTACC...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCATCTTTTGCCCGTGGCTaGTATCCAAAGTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPAFSLSTASIPKAQRIASFARG*YPKSSS Trigger: AGAGGAAGACTTTGGATAGCAGCCACGGGCAAAAGA...TGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGATCAGCCTCCGAAGAACCAATGCTATGCAACAGGCAGTTCACAGTCGACCTTCCTGGAATTCTTaGTCCTGGATTCGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVISLRRTNAMQQAVHSRPSWNS*SWIRSW Trigger: CCAGCTGCGAATCCAGGACCAAGAATTCCAGGAAGG...TCGACTGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | AGCACTTGGGAGCTTGACGCTAGAGATCTAAAACTTAAGGCTAGGCCTGGGCTTCCTTCCTGGAATTCTTaGTCCTGGATTCGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STWELDARDLKLKARPGLPSWNS*SWIRSW Trigger: CCAGCTGCGAATCCAGGACCAAGAATTCCAGGAAGG...AAGCCCAGGCCTAGCCTTAAGTTTTAGATCTCTAGCGTCAAGCTCCCAAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAAAGGTCTTTTGCCCGTaGCTGCTATCCAAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WCPAFSLSTASIPKAQRIKVFCP*LLSKVF Trigger: GAAGACTTTGGATAGCAGCCACGGGCAAAAGACCTT...TATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAAATCTAAAGGTGTTTTaGCCTCCACAGCTACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WCPAFSLSTASIPKAQRINLKVF*PPQLRQ Trigger: CTGACGTAGCTGTGGAGGTCAAAACACCTTTAGATT...TATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGAGGGGATTTTTGCAGATaGAAACAAATGAAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGGDFCR*KQMKSQ Trigger: CTGACTCTTCATTTGTTTTCATCTGCAAAAATCCCC...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 |
||
| CDS-3UTR CCA 90 bp | GATTCTCAGAGATTGAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAAATGAGTTTGTGCTTCTaGCCCAGGCAATCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSQRLKPGAQPFRFLLLQMSLCF*PRQSHG Trigger: CCCGTGTGATTGCCTGGGCCAGAAGCACAAACTCAT...TTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTCAATCTCTGAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCAGGTTCAAAGTCCCACTaGCAATGGCTTGTATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPAFSLSTASIPKAQRIAGSKSH*QWLVLS Trigger: AGACAATACAAGCCATTGCCAGTGGGACTTTGAACC...TGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCTTTCTCAAGCACTGTTaGAAGGAATCAGAGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPGAQPFRFLLLQSQRPSFLKHC*KESEMN Trigger: GTTCATCTCTGATTCCTTTCAACAGTGCTTGAGAAA...GCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAAAGCAGAGCACACACATTTGAGACCATGAATTTCCTAGGCTCCAGCAACGAACAAGCAGGGGCCTaGACCCTCCTGCTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IKSRAHTFETMNFLGSSNEQAGA*TLLLTN Trigger: GTTTGTGAGCAGGAGGGTTCAGGCCCCTGCTTGTTC...GTTGCTGGAGCCTAGGAAATTCATGGTCTCAAATGTGTGTGCTCTGCTTTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GTTCGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATTTCTTCAGCAGTTTCTaGCTTTTGTTTGAGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VRVSLGIQSDQPPKNQCYFFSSF*LLFESR Trigger: GCGGGACTCAAACAAAAGTCAGAAACTGCTGAAGAA...ATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGAACTGGCAAAGTAATCTaGTTCATCGTCAATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGTGKVI*FIVNNL Trigger: CAAGTTATTGACGATGAATCAGATTACTTTGCCAGT...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCATCATCTAGTCTGCTGTaGTACTCTGCTAGTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: CPAFSLSTASIPKAQRIASSSLL*YSASGF Trigger: AAATCCACTAGCAGAGTATCACAGCAGACTAGATGA...TGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTCTTCTTCTGTGGGGTTaGGCCAGTGTTGTCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPADSTLVHKTPLCCIVPLLLWG*ASVVNP Trigger: TGGGTTGACAACACTGGCTCAACCCCACAGAAGAAG...AGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTTGGTCAAAGTCTTCCTCTGTaGGGAGTATACCAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSQNVAWSQDVKSRTLGQSLPL*GVYQDL Trigger: CAGATCCTGGTATACTCCTCACAGAGGAAGACTTTG...ACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTAGTTCTGAGACTTCCTaGGGGGAAGGTCTTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NPKGPADSTLVHKTPLCCSSETS*GEGLLP Trigger: GGGCAAAAGACCTTCCCCTCAGGAAGTCTCAGAACT...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GGAATTCTAGCTTTCCACTCTGAGAGATTTGGGTTAGAAGCTGAGCATGGGGCTAGTCAGACTCTTGACTaGTGTCTGGGAACTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GILAFHSERFGLEAEHGASQTLD*CLGTAP Trigger: AGGAGCAGTTCCCAGACATCAGTCAAGAGTCTGACT...AGCCCCATGCTCAGCTTCTAACCCAAATCTCTCAGAGTGGAAAGCTAGAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119245.8 |
||
| CDS-3UTR GCA 90 bp | GGAATTCTAGCTTTCCACTCTGAGAGATTTGGGTTAGAAGCTGAGCATGGGGCTTTTGCAACTGCTGTGTaGACCAGTGTACTAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GILAFHSERFGLEAEHGAFATAV*TSVLAA Trigger: AGCCGCTAGTACACTGGTGCACACAGCAGTTGCAAA...AGCCCCATGCTCAGCTTCTAACCCAAATCTCTCAGAGTGGAAAGCTAGAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTTTGTCTCATCTAGTCTaGTGTGATACTCTGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFAFYCFNPKGPADSTLSHLV*CDTLLV Trigger: CACTAGCAGAGTATCACAGCAGACTAGATGAGACAA...AGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTGAGGGGAAGGTCTTTTaGCCGTGGCTGCTATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GPADSTLVHKTPLCCIVPEGKVF*PWLLSK Trigger: TTTGGATAGCAGCCACGGGCAAAAGACCTTCCCCTC...AGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | GTTCGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATTTGCCCTCATTTCCCTaGAGAAGGTCTGTCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: VRVSLGIQSDQPPKNQCYLPSFP*RRSVTY Trigger: ATATGTGACAGACCTTCTCCAGGGAAATGAGGGCAA...ATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR CAA 72 bp | CATTTGCTGTCTGACCCTTATGGAATTGGAATGACTTaGCTAACCCCTGCCCCCTGCTGTTCAGAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLSDPYGIGMT*LTPAPCCSEVS Trigger: AGAGACTTCTGAACAGCAGGGGGCAGGGGTTAGCAAAGTCATTCCAATTCCATAAGGGTCAGACAGCAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCTCAGAGATGAACTCTTaGTCATTCTTTTGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPSLFAFYCFNPKGPADSSEMNS*SFFCHL Trigger: CAAATGGCAAAAGAATGATCAAGAGTTCATCTCTGA...GCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAAGAGAGACCTTATACTACCACTGCCATGTAAACCAAAGACAGACTTTCAGGCAATCACACGGGTaGCGACCAGGAAGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NRRETLYYHCHVNQRQTFRQSHG*RPGSRT Trigger: AGTCCTGCTTCCTGGTCGTCACCCGTGTGATTGCCT...GAAAGTCTGTCTTTGGTTTACATGGCAGTGGTAGTATAAGGTCTCTCTTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTGATCAGCCTCCGAAGAACCAATGCTATGCAACAGGCAGTTCACAGTCGATTCTTCAGCAGTTTCTaGCTTTTGTTTGAGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RVISLRRTNAMQQAVHSRFFSSF*LLFESR Trigger: GCGGGACTCAAACAAAAGTCAGAAACTGCTGAAGAA...TCGACTGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATCCAACGTGACCAGTaGCTGGTTCAAAGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NPKGPADSTLVHKTPLCCIQRDQ*LVQSPT Trigger: AGTGGGACTTTGAACCAGTCACTGGTCACGTTGGAT...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | TTATGTGGTTCTGGCTGTGTGTTTGAGAAGCTGAGGTGGGTTCTTAGAAACTTGCTTCTTCTGTGGGGTTaGGCCAGTGTTGTCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCGSGCVFEKLRWVLRNLLLLWG*ASVVNP Trigger: TGGGTTGACAACACTGGCTCAACCCCACAGAAGAAG...CAAGTTTCTAAGAACCCACCTCAGCTTCTCAAACACACAGCCAGAACCACATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTGGGGATTTTTGCAGATaGAAACAAATGAAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFAFYCFNPKGPADSTGDFCR*KQMKSQ Trigger: CTGACTCTTCATTTGTTTTCATCTGCAAAAATCCCC...AGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGTAGCCAAGCTTTCTTGCTCACATTATCTATGGGTGTATTTGCAGTACGAGGGGAAGGTCTTTTaGCCGTGGCTGCTATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAVAKLSCSHYLWVYLQYEGKVF*PWLLSK Trigger: TTTGGATAGCAGCCACGGGCAAAAGACCTTCCCCTC...GTACTGCAAATACACCCATAGATAATGTGAGCAAGAAAGCTTGGCTACAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTATGCAACAGGCAGTTCACAGTCGAGTGAACATCAATGTGGAATGAGTCCTTCCTGGAATTCTTaGTCCTGGATTCGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCYATGSSQSSEHQCGMSPSWNS*SWIRSW Trigger: CCAGCTGCGAATCCAGGACCAAGAATTCCAGGAAGG...ACTCATTCCACATTGATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | AGATTGAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCGACGGATAGTCATTTaGAAACTCCACATCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLKPGAQPFRFLLLQSQRRRIVI*KLHIFP Trigger: GGGAAAGATGTGGAGTTTCCAAATGACTATCCGTCG...CCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTCAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTTCAGAGATGAACTCTTaGTCATTCTTTTGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFAFYCFNPKGPADSTSEMNS*SFFCHL Trigger: CAAATGGCAAAAGAATGATCAAGAGTTCATCTCTGA...AGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR TCA 90 bp | GGAATTCTAGCTTTCCACTCTGAGAGATTTGGGTTAGAAGCTGAGCATGGGGCTAATCTAAAGGTGTTTTaGCCTCCACAGCTACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GILAFHSERFGLEAEHGANLKVF*PPQLRQ Trigger: CTGACGTAGCTGTGGAGGTCAAAACACCTTTAGATT...AGCCCCATGCTCAGCTTCTAACCCAAATCTCTCAGAGTGGAAAGCTAGAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR TCA 90 bp | AAAAGGGAACACAGAAGCTACAACAAAAAGGCATCTCGGAAATTCAGAACTTTCAGGCAATCACACGGGTaGCGACCAGGAAGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KREHRSYNKKASRKFRTFRQSHG*RPGSRT Trigger: AGTCCTGCTTCCTGGTCGTCACCCGTGTGATTGCCT...GAAAGTTCTGAATTTCCGAGATGCCTTTTTGTTGTAGCTTCTGTGTTCCCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAACTGGCAAAGTAATCTaGTTCATCGTCAATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: WCPAFSLSTASIPKAQRITGKVI*FIVNNL Trigger: CAAGTTATTGACGATGAATCAGATTACTTTGCCAGT...TATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR TCA 90 bp | CAATGCTATGCAACAGGCAGTTCACAGTCGAGTGAACATCAATGTGGAATGAGTATCCAACGTGACCAGTaGCTGGTTCAAAGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QCYATGSSQSSEHQCGMSIQRDQ*LVQSPT Trigger: AGTGGGACTTTGAACCAGTCACTGGTCACGTTGGAT...ACTCATTCCACATTGATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR TCA 90 bp | GATTCTCAGAGATTGAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAAAAGATCTATCCAACGTaGCCAGTGACTGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSQRLKPGAQPFRFLLLQKIYPT*PVTGSK Trigger: CTTTGAACCAGTCACTGGTCACGTTGGATAGATCTT...TTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTCAATCTCTGAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCTTCTTCTGTGGGGTTaGGCCAGTGTTGTCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGPADSTLVHKTPLCCIVLLLWG*ASVVNP Trigger: TGGGTTGACAACACTGGCTCAACCCCACAGAAGAAG...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTAGTTCTGAGACTTCCTaGGGGGAAGGTCTTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGPADSTLVHKTPLCCIVSSETS*GEGLLP Trigger: GGGCAAAAGACCTTCCCCTCAGGAAGTCTCAGAACT...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTTTAGTATCTGGGAACTGCTCCTaGAATTGTTTCTGGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFAFYCFNPKGPADSTLVSGNCS*NCFWDK Trigger: CTTGTCCCAGAAACAATTTCAGGAGCAGTTCCCAGA...TACTAAAGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTGAGGGGAAGGTCTTTTaGCCGTGGCTGCTATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGPADSTLVHKTPLCCIVEGKVF*PWLLSK Trigger: TTTGGATAGCAGCCACGGGCAAAAGACCTTCCCCTC...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGAAGTCCCACTGGCAATaGCTTGTATTGTCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RLKPGAQPFRFLLLQSQRKSHWQ*LVLSHL Trigger: TAGATGAGACAATACAAGCCATTGCCAGTGGGACTT...CCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTCAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | GCGAAACTGCCCCAGAGTAACAGGGTCAGAGTGAAGTGTCATAATACACTAACAAAGGTCTTTTGCCCGTaGCTGCTATCCAAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKLPQSNRVRVKCHNTLTKVFCP*LLSKVF Trigger: GAAGACTTTGGATAGCAGCCACGGGCAAAAGACCTT...TGTTAGTGTATTATGACACTTCACTCTGACCCTGTTACTCTGGGGCAGTTTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTTTCTTCAGCAGTTTCTaGCTTTTGTTTGAGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GPADSTLVHKTPLCCIVPFFSSF*LLFESR Trigger: GCGGGACTCAAACAAAAGTCAGAAACTGCTGAAGAA...AGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTAAGATCTATCCAACGTaGCCAGTGACTGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NPKGPADSTLVHKTPLCCKIYPT*PVTGSK Trigger: CTTTGAACCAGTCACTGGTCACGTTGGATAGATCTT...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR TCA 90 bp | AAAAGGGAACACAGAAGCTACAACAAAAAGGCATCTCGGAAATTCAGAACTTTCGTGTTGTCAACCCACTaGGGAGAGGCCTGGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: KREHRSYNKKASRKFRTFVLSTH*GEAWYM Trigger: CATGTACCAGGCCTCTCCTCAGTGGGTTGACAACAC...GAAAGTTCTGAATTTCCGAGATGCCTTTTTGTTGTAGCTTCTGTGTTCCCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR GCA 90 bp | ATAAAAAGCAGAGCACACACATTTGAGACCATGAATTTCCTAGGCTCCAGCAACTTTGCAACTGCTGTGTaGACCAGTGTACTAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSRAHTFETMNFLGSSNFATAV*TSVLAA Trigger: AGCCGCTAGTACACTGGTGCACACAGCAGTTGCAAA...GTTGCTGGAGCCTAGGAAATTCATGGTCTCAAATGTGTGTGCTCTGCTTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | GGAATTCTAGCTTTCCACTCTGAGAGATTTGGGTTAGAAGCTGAGCATGGGGCTTTGTCTCATCTAGTCTaGTGTGATACTCTGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GILAFHSERFGLEAEHGALSHLV*CDTLLV Trigger: CACTAGCAGAGTATCACAGCAGACTAGATGAGACAA...AGCCCCATGCTCAGCTTCTAACCCAAATCTCTCAGAGTGGAAAGCTAGAATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR GCA 90 bp | AATACTGCATGTGTACATCACTGGAACAAGAATCTGTTCGGGTTTCCCTGGGAATCTTTTGCCCGTGGCTaGTATCCAAAGTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTACVHHWNKNLFGFPWESFARG*YPKSSS Trigger: AGAGGAAGACTTTGGATAGCAGCCACGGGCAAAAGA...TTCCCAGGGAAACCCGAACAGATTCTTGTTCCAGTGATGTACACATGCAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | CTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTTTAGTATTGCCCTCATTTCCCTaGAGAAGGTCTGTCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: LFAFYCFNPKGPADSTLVLPSFP*RRSVTY Trigger: ATATGTGACAGACCTTCTCCAGGGAAATGAGGGCAA...TACTAAAGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | GCGAAACTGCCCCAGAGTAACAGGGTCAGAGTGAAGTGTCATAATACACTAACAGGTTCAAAGTCCCACTaGCAATGGCTTGTATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKLPQSNRVRVKCHNTLTGSKSH*QWLVLS Trigger: AGACAATACAAGCCATTGCCAGTGGGACTTTGAACC...TGTTAGTGTATTATGACACTTCACTCTGACCCTGTTACTCTGGGGCAGTTTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | CCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTTTTCCTTCCTGGAATTCTTaGTCCTGGATTCGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PADSTLVHKTPLCCIVPFPSWNS*SWIRSW Trigger: CCAGCTGCGAATCCAGGACCAAGAATTCCAGGAAGG...AAAAGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | GGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTTGGTAAGACTCTTGACTGATGTCTaGGAACTGCTCCTGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GHRMWPGLKMSKAEHLVRLLTDV*ELLLKL Trigger: CAATTTCAGGAGCAGTTCCCAGACATCAGTCAAGAG...TCTTACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119245.8 |
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| CDS-3UTR TCA 90 bp | AGAGTGATCAGCCTCCGAAGAACCAATGCTATGCAACAGGCAGTTCACAGTCGATCAGAGATGAACTCTTaGTCATTCTTTTGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVISLRRTNAMQQAVHSRSEMNS*SFFCHL Trigger: CAAATGGCAAAAGAATGATCAAGAGTTCATCTCTGA...TCGACTGTGAACTGCCTGTTGCATAGCATTGGTTCTTCGGAGGCTGATCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR TCA 90 bp | AACAGAAGAGAGACCTTATACTACCACTGCCATGTAAACCAAAGACAGACTTTCATCCAACGTGACCAGTaGCTGGTTCAAAGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NRRETLYYHCHVNQRQTFIQRDQ*LVQSPT Trigger: AGTGGGACTTTGAACCAGTCACTGGTCACGTTGGAT...GAAAGTCTGTCTTTGGTTTACATGGCAGTGGTAGTATAAGGTCTCTCTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR GCA 90 bp | CACTTTATACACAGAGGTCCAACAGAACACGAGAGAGAATACTGCATGTGTACATCTTTTGCCCGTGGCTaGTATCCAAAGTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HFIHRGPTEHEREYCMCTSFARG*YPKSSS Trigger: AGAGGAAGACTTTGGATAGCAGCCACGGGCAAAAGA...TGTACACATGCAGTATTCTCTCTCGTGTTCTGTTGGACCTCTGTGTATAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR GCA 90 bp | ATAAAAAGCAGAGCACACACATTTGAGACCATGAATTTCCTAGGCTCCAGCAACTCTTTTGCCCGTGGCTaGTATCCAAAGTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSRAHTFETMNFLGSSNSFARG*YPKSSS Trigger: AGAGGAAGACTTTGGATAGCAGCCACGGGCAAAAGA...GTTGCTGGAGCCTAGGAAATTCATGGTCTCAAATGTGTGTGCTCTGCTTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | CCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTTTTCTACTCCGCTTTAGCTaGTCCACTGATCTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PADSTLVHKTPLCCIVPFLLRFS*STDLCP Trigger: TGGACAGAGATCAGTGGACCAGCTAAAGCGGAGTAG...AAAAGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGGAACACAGAAGCTACAACAAAAAGGCATCTCGGAAATTCAGAACTTTCATGAGTTTGTGCTTCTaGCCCAGGCAATCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: KREHRSYNKKASRKFRTFMSLCF*PRQSHG Trigger: CCCGTGTGATTGCCTGGGCCAGAAGCACAAACTCAT...GAAAGTTCTGAATTTCCGAGATGCCTTTTTGTTGTAGCTTCTGTGTTCCCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | GGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTAAGTCCCACTGGCAATaGCTTGTATTGTCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPADSTLVHKTPLCCIVPKSHWQ*LVLSHL Trigger: TAGATGAGACAATACAAGCCATTGCCAGTGGGACTT...AGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | CAATGCTATGCAACAGGCAGTTCACAGTCGAGTGAACATCAATGTGGAATGAGTCGACGGATAGTCATTTaGAAACTCCACATCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QCYATGSSQSSEHQCGMSRRIVI*KLHIFP Trigger: GGGAAAGATGTGGAGTTTCCAAATGACTATCCGTCG...ACTCATTCCACATTGATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CCA 90 bp | TTATGTGGTTCTGGCTGTGTGTTTGAGAAGCTGAGGTGGGTTCTTAGAAACTTGCGACGGATAGTCATTTaGAAACTCCACATCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCGSGCVFEKLRWVLRNLRRIVI*KLHIFP Trigger: GGGAAAGATGTGGAGTTTCCAAATGACTATCCGTCG...CAAGTTTCTAAGAACCCACCTCAGCTTCTCAAACACACAGCCAGAACCACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGGAACACAGAAGCTACAACAAAAAGGCATCTCGGAAATTCAGAACTTTCTCTCTGCCCCTGACATaGGCTTCTTCAGCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KREHRSYNKKASRKFRTFSLPLT*ASSAVS Trigger: AGAAACTGCTGAAGAAGCTCATGTCAGGGGCAGAGA...GAAAGTTCTGAATTTCCGAGATGCCTTTTTGTTGTAGCTTCTGTGTTCCCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTAAGATCTATCCAACGTaGCCAGTGACTGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGPADSTLVHKTPLCCIVKIYPT*PVTGSK Trigger: CTTTGAACCAGTCACTGGTCACGTTGGATAGATCTT...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTATACACAGAGGTCCAACAGAACACGAGAGAGAATACTGCATGTGTACAAAGATCTATCCAACGTaGCCAGTGACTGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HFIHRGPTEHEREYCMCTKIYPT*PVTGSK Trigger: CTTTGAACCAGTCACTGGTCACGTTGGATAGATCTT...TGTACACATGCAGTATTCTCTCTCGTGTTCTGTTGGACCTCTGTGTATAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTATACACAGAGGTCCAACAGAACACGAGAGAGAATACTGCATGTGTACATTGCCCTCATTTCCCTaGAGAAGGTCTGTCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: HFIHRGPTEHEREYCMCTLPSFP*RRSVTY Trigger: ATATGTGACAGACCTTCTCCAGGGAAATGAGGGCAA...TGTACACATGCAGTATTCTCTCTCGTGTTCTGTTGGACCTCTGTGTATAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAAAGCAGAGCACACACATTTGAGACCATGAATTTCCTAGGCTCCAGCAACGGTTCAAAGTCCCACTaGCAATGGCTTGTATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSRAHTFETMNFLGSSNGSKSH*QWLVLS Trigger: AGACAATACAAGCCATTGCCAGTGGGACTTTGAACC...GTTGCTGGAGCCTAGGAAATTCATGGTCTCAAATGTGTGTGCTCTGCTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCTCTTGACTGATGTCTaGGAACTGCTCCTGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: KGPADSTLVHKTPLCCIVLLTDV*ELLLKL Trigger: CAATTTCAGGAGCAGTTCCCAGACATCAGTCAAGAG...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 |
||
| 3UTR CAA 72 bp | TCTACAAACAGTTTCCCTGGCTGTAGCCAAGCTTTCTaGCTCACATTATCTATGGGTGTATTTGCAGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: STNSFPGCSQAF*LTLSMGVFAVP Trigger: TGGTACTGCAAATACACCCATAGATAATGTGAGCAAGAAAGCTTGGCTACAGCCAGGGAAACTGTTTGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTTTTAATCTAAAGGTGTTTTaGCCTCCACAGCTACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PADSTLVHKTPLCCIVPFNLKVF*PPQLRQ Trigger: CTGACGTAGCTGTGGAGGTCAAAACACCTTTAGATT...AAAAGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | ACATTCTCATTTCACCATAGGCTTATGTTAAACAAAGATTCCTCAGACATCCTAAGAAGTCTCTGCCCCTaGCATGAGCTTCTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFSFHHRLMLNKDSSDILRSLCP*HELLQQ Trigger: CTGCTGAAGAAGCTCATGTCAGGGGCAGAGACTTCT...TAGGATGTCTGAGGAATCTTTGTTTAACATAAGCCTATGGTGAAATGAGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCCCATAGTTTCCATCATTCCCTACTGTGAGCTCATACAAAGGAAACTGTCATCTAGTCTGCTGTaGTACTCTGCTAGTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TKPIVSIIPYCELIQRKLSSSLL*YSASGF Trigger: AAATCCACTAGCAGAGTATCACAGCAGACTAGATGA...CAGTTTCCTTTGTATGAGCTCACAGTAGGGAATGATGGAAACTATGGGCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | ACATTCTCATTTCACCATAGGCTTATGTTAAACAAAGATTCCTCAGACATCCTAAGTTCTGAGACTTCCTaGGGGGAAGGTCTTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TFSFHHRLMLNKDSSDILSSETS*GEGLLP Trigger: GGGCAAAAGACCTTCCCCTCAGGAAGTCTCAGAACT...TAGGATGTCTGAGGAATCTTTGTTTAACATAAGCCTATGGTGAAATGAGAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | TGCCATCTAATCTTGGCTAGGCCCCACACAACATTAAACAAATCTTCTAAATTATTTGCAACTGCTGTGTaGACCAGTGTACTAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHLILARPHTTLNKSSKLFATAV*TSVLAA Trigger: AGCCGCTAGTACACTGGTGCACACAGCAGTTGCAAA...TAATTTAGAAGATTTGTTTAATGTTGTGTGGGGCCTAGCCAAGATTAGATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAAAGCAGAGCACACACATTTGAGACCATGAATTTCCTAGGCTCCAGCAACAAGTCCCACTGGCAATaGCTTGTATTGTCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: IKSRAHTFETMNFLGSSNKSHWQ*LVLSHL Trigger: TAGATGAGACAATACAAGCCATTGCCAGTGGGACTT...GTTGCTGGAGCCTAGGAAATTCATGGTCTCAAATGTGTGTGCTCTGCTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTAAGTCCCACTGGCAATaGCTTGTATTGTCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: KGPADSTLVHKTPLCCIVKSHWQ*LVLSHL Trigger: TAGATGAGACAATACAAGCCATTGCCAGTGGGACTT...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR CAA 72 bp | ATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTaGGTAAGAACATTCTCATTTCACCATAGGCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: MWPGLKMSKAEH*VRTFSFHHRLM Trigger: CATAAGCCTATGGTGAAATGAGAATGTTCTTACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAAGAGAGACCTTATACTACCACTGCCATGTAAACCAAAGACAGACTTTCTTGTCTCATCTAGTCTaGTGTGATACTCTGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRRETLYYHCHVNQRQTFLSHLV*CDTLLV Trigger: CACTAGCAGAGTATCACAGCAGACTAGATGAGACAA...GAAAGTCTGTCTTTGGTTTACATGGCAGTGGTAGTATAAGGTCTCTCTTCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTACTGGCAAAGTAATCTaGTTCATCGTCAATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGPADSTLVHKTPLCCIVTGKVI*FIVNNL Trigger: CAAGTTATTGACGATGAATCAGATTACTTTGCCAGT...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTCACCATAGGCTTATGTTAAACAAAGATTCCTCAGACATCCTAGTAGTCCGACGGATAGTCATTTaGAAACTCCACATCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFHHRLMLNKDSSDILVVRRIVI*KLHIFP Trigger: GGGAAAGATGTGGAGTTTCCAAATGACTATCCGTCG...GACTACTAGGATGTCTGAGGAATCTTTGTTTAACATAAGCCTATGGTGAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR CAA 72 bp | GCCAAGCTTTCTTGCTCACATTATCTATGGGTGTATTaGCAGTACCACAGCACAGCTGAATGGTTTATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKLSCSHYLWVY*QYHSTAEWFIK Trigger: TTTTATAAACCATTCAGCTGTGCTGTGGTACTGCAAATACACCCATAGATAATGTGAGCAAGAAAGCTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR CAA 72 bp | ACACATTCACAGACACTGAGAATAGCAGATGTGTGCTaGCTATTTGAATCGCAAGGAAGAAAATATCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: THSQTLRIADVC*LFESQGRKYPF Trigger: GAAAGGATATTTTCTTCCTTGCGATTCAAATAGCAAGCACACATCTGCTATTCTCAGTGTCTGTGAATGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR GCA 90 bp | ACATTCTCATTTCACCATAGGCTTATGTTAAACAAAGATTCCTCAGACATCCTATTGTCTCATCTAGTCTaGTGTGATACTCTGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSFHHRLMLNKDSSDILLSHLV*CDTLLV Trigger: CACTAGCAGAGTATCACAGCAGACTAGATGAGACAA...TAGGATGTCTGAGGAATCTTTGTTTAACATAAGCCTATGGTGAAATGAGAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | TCATTTCACCATAGGCTTATGTTAAACAAAGATTCCTCAGACATCCTAGTAGTCACTGGCAAAGTAATCTaGTTCATCGTCAATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFHHRLMLNKDSSDILVVTGKVI*FIVNNL Trigger: CAAGTTATTGACGATGAATCAGATTACTTTGCCAGT...GACTACTAGGATGTCTGAGGAATCTTTGTTTAACATAAGCCTATGGTGAAATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR TCA 90 bp | ACATTCTCATTTCACCATAGGCTTATGTTAAACAAAGATTCCTCAGACATCCTATCAGAGATGAACTCTTaGTCATTCTTTTGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSFHHRLMLNKDSSDILSEMNS*SFFCHL Trigger: CAAATGGCAAAAGAATGATCAAGAGTTCATCTCTGA...TAGGATGTCTGAGGAATCTTTGTTTAACATAAGCCTATGGTGAAATGAGAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| 3UTR CAA 72 bp | GATCAATTTACATTTCATCTCCTGAATGAAGCCACATaGTATTCACACATGCAAATGGACGTTTATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DQFTFHLLNEAT*YSHMQMDVYPS Trigger: ACTTGGATAAACGTCCATTTGCATGTGTGAATACAATGTGGCTTCATTCAGGAGATGAAATGTAAATTGATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| 3UTR CAA 72 bp | GATCTAATGTATAAGACAGTAAGAGAATCTCAAGTTTaGACTTCTTGTATCTCGAGAGCAAGAATTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLMYKTVRESQV*TSCISRARIGK Trigger: TTTGCCAATTCTTGCTCTCGAGATACAAGAAGTCAAAACTTGAGATTCTCTTACTGTCTTATACATTAGATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGAACTGGGCTCTAGTCTaGGTCCTGCCGAGAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EAWCPAFSLSTASIPKAQNWALV*VLPRVK Trigger: CTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTT...CTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAACTGGGCTCTAGTCTaGGTCCTGCCGAGAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVPSLFAFYCFNPKGPADNWALV*VLPRVK Trigger: CTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTT...ATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS GCA 90 bp | GTACACACCAAAGAGCCACAGAACAAGCAGGGGCCTGAACCCTCCTaGTCACAAACGATCCGCCCACAGACCAGACAGTTATTGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VHTKEPQNKQGPEPS*SQTIRPQTRQLLMS Trigger: ACTCATCAATAACTGTCTGGTCTGTGGGCGGATCGTTTGTGAGCAGGAGGGTTCAGGCCCCTGCTTGTTCTGTGGCTCTTTGGTGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCAGGGCGAAAGTTTTTaGCAACTGCTGTGTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EAWCPAFSLSTASIPKAQQGESF*QLLCAP Trigger: TGGTGCACACAGCAGTTGCAAAAAACTTTCGCCCTG...CTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGAGCAGGAACTTCCTGTTaGTTTCGTCCTTTCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGAGTSC*FRPFLL Trigger: TAGGAGGAAAGGACGAAACAAACAGGAAGTTCCTGC...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS TCA 90 bp | TCAAAGCCTTCCTGGAATTCTTGGTCCTGGATTCGCAGCTGGTGCTaGTGTAAACTGGGCTCTAGTCTTGGTCCTGCCGAGAGTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKPSWNSWSWIRSWC*CKLGSSLGPAESEV Trigger: GACTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTTTACATCAGCACCAGCTGCGAATCCAGGACCAAGAATTCCAGGAAGGCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS CCA 90 bp | CCTGGAATTCTTGGTCCTGGATTCGCAGCTGGTGCTGATGTAAACTaGGCTCTAGTCTTGGTCCTGCCGAGAGTGAAGTCTTCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGILGPGFAAGADVN*ALVLVLPRVKSSSV Trigger: CACAGAAGAAGACTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTTTACATCAGCACCAGCTGCGAATCCAGGACCAAGAATTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGCAGGAACTTCCTGTTaGTTTCGTCCTTTCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: KPGAQPFRFLLLQSQRPSAGTSC*FRPFLL Trigger: TAGGAGGAAAGGACGAAACAAACAGGAAGTTCCTGC...GCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATTCTTTACGGAGTTGTaGCTTTCTTGTGCCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGAQPFRFLLLQSQRPSGFFTEL*LSCALA Trigger: GGCTAAGGCACAAGAAAGCAACAACTCCGTAAAGAA...TCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTAGCAGGACTGCAAGTTaGTCCTGTCCCTCTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSLFAFYCFNPKGPADSTSRTAS*SCPSLV Trigger: TACAAGAGAGGGACAGGACAAACTTGCAGTCCTGCT...AGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | TGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAAGCAGGACTGCAAGTTaGTCCTGTCCCTCTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WCPAFSLSTASIPKAQRISRTAS*SCPSLV Trigger: TACAAGAGAGGGACAGGACAAACTTGCAGTCCTGCT...TATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | GTTCGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATCAGGGCGAAAGTTTTTaGCAACTGCTGTGTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VRVSLGIQSDQPPKNQCYQGESF*QLLCAP Trigger: TGGTGCACACAGCAGTTGCAAAAAACTTTCGCCCTG...ATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATGCATCCCTGCTCCTGAAATaGTTTCTGGGACAAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RVSLGIQSDQPPKNQCYASLLLK*FLGQAI Trigger: GATTGCTTGTCCCAGAAACAATTTCAGGAGCAGGGA...TGCATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTTTCTTTACGGAGTTGTaGCTTTCTTGTGCCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSLFAFYCFNPKGPADSTFFTEL*LSCALA Trigger: GGCTAAGGCACAAGAAAGCAACAACTCCGTAAAGAA...AGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCACTTTAGTAGCCTTCCTGGAATTCTaGGTCCTGGATTCGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFAFYCFNPKGPADSTLVAFLEF*VLDSQL Trigger: CAGCTGCGAATCCAGGACCAAGAATTCCAGGAAGGC...TACTAAAGTGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTGCCTTCCTGGAATTCTaGGTCCTGGATTCGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NPKGPADSTLVHKTPLCCAFLEF*VLDSQL Trigger: CAGCTGCGAATCCAGGACCAAGAATTCCAGGAAGGC...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGCCTTCCTGGAATTCTaGGTCCTGGATTCGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PKGPADSTLVHKTPLCCIAFLEF*VLDSQL Trigger: CAGCTGCGAATCCAGGACCAAGAATTCCAGGAAGGC...TATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCAAAATCTAAAGGTGTTTaGACCTCCACAGCTACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CPAFSLSTASIPKAQRIAKSKGV*TSTATS Trigger: TGACGTAGCTGTGGAGGTCAAAACACCTTTAGATTT...TGCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGGATAGCTTCTTCTTTACGGAGTaGTTGCTTTCTTGTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VPSLFAFYCFNPKGPADSFFFTE*LLSCAL Trigger: TAAGGCACAAGAAAGCAACAACTCCGTAAAGAAGAA...GCTATCCGCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | AATACTGCATGTGTACATCACTGGAACAAGAATCTGTTCGGGTTTCCCTGGGAAAACTGGGCTCTAGTCTaGGTCCTGCCGAGAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NTACVHHWNKNLFGFPWENWALV*VLPRVK Trigger: CTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTT...TTCCCAGGGAAACCCGAACAGATTCTTGTTCCAGTGATGTACACATGCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGTTCTTTACGGAGTTGTaGCTTTCTTGTGCCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLKPGAQPFRFLLLQSQRFFTEL*LSCALA Trigger: GGCTAAGGCACAAGAAAGCAACAACTCCGTAAAGAA...CCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTCAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTAGCAGGACTGCAAGTTaGTCCTGTCCCTCTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NPKGPADSTLVHKTPLCCSRTAS*SCPSLV Trigger: TACAAGAGAGGGACAGGACAAACTTGCAGTCCTGCT...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAATCCCAAAGGCCCAGCGTTTCTGACTTTTGTTaGAGTCCCGCTGTAAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: KPGAQPFRFLLLQSQRPSVSDFC*SPAVKY Trigger: ATATTTTACAGCGGGACTCAAACAAAAGTCAGAAAC...GCTGGGCCTTTGGGATTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTTGGTATTTCTCGCTCAACTTaGGACAGCCACTGGTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGSQNVAWSQDVKSRTLGISRST*DSHWLE Trigger: TTCTAACCAGTGGCTGTCCAAAGTTGAGCGAGAAAT...ACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
||
| CDS-3UTR CAA 90 bp | GCGAAACTGCCCCAGAGTAACAGGGTCAGAGTGAAGTGTCATAATACACTAACAGCAGGAACTTCCTGTTaGTTTCGTCCTTTCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: AKLPQSNRVRVKCHNTLTAGTSC*FRPFLL Trigger: TAGGAGGAAAGGACGAAACAAACAGGAAGTTCCTGC...TGTTAGTGTATTATGACACTTCACTCTGACCCTGTTACTCTGGGGCAGTTTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACACTTGGTAAATCTAAAGGTGTTTaGACCTCCACAGCTACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGSQNVAWSQDVKSRTLGKSKGV*TSTATS Trigger: TGACGTAGCTGTGGAGGTCAAAACACCTTTAGATTT...ACCAAGTGTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCCTGGGTCACAGAATGTGGCCTGGTCTCAAGATGTCAAAAGCAGAACTTCTTCTTTACGGAGTaGTTGCTTTCTTGTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RQAWVTECGLVSRCQKQNFFFTE*LLSCAL Trigger: TAAGGCACAAGAAAGCAACAACTCCGTAAAGAAGAA...GTTCTGCTTTTGACATCTTGAGACCAGGCCACATTCTGTGACCCAGGCTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | GATTCTCAGAGATTGAAGCCTGGTGCCCAGCCTTTTCGCTTTCTACTGCTTCAAATTTCTCGCTCAACTTaGGACAGCCACTGGTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DSQRLKPGAQPFRFLLLQISRST*DSHWLE Trigger: TTCTAACCAGTGGCTGTCCAAAGTTGAGCGAGAAAT...TTGAAGCAGTAGAAAGCGAAAAGGCTGGGCACCAGGCTTCAATCTCTGAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTTTTAACTGGGCTCTAGTCTaGGTCCTGCCGAGAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PADSTLVHKTPLCCIVPFNWALV*VLPRVK Trigger: CTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTT...AAAAGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | GGAATTCTAGCTTTCCACTCTGAGAGATTTGGGTTAGAAGCTGAGCATGGGGCTGAACTGCTCCTGAAATaGTTTCTGGGACAAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: GILAFHSERFGLEAEHGAELLLK*FLGQAI Trigger: GATTGCTTGTCCCAGAAACAATTTCAGGAGCAGTTC...AGCCCCATGCTCAGCTTCTAACCCAAATCTCTCAGAGTGGAAAGCTAGAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119245.8 |
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| CDS-3UTR CAA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTAGCAGGACTGCAAGTTaGTCCTGTCCCTCTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KGPADSTLVHKTPLCCIVSRTAS*SCPSLV Trigger: TACAAGAGAGGGACAGGACAAACTTGCAGTCCTGCT...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | GTTCGGGTTTCCCTGGGAATCCAGAGTGATCAGCCTCCGAAGAACCAATGCTATGTTTCTGACTTTTGTTaGAGTCCCGCTGTAAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: VRVSLGIQSDQPPKNQCYVSDFC*SPAVKY Trigger: ATATTTTACAGCGGGACTCAAACAAAAGTCAGAAAC...ATAGCATTGGTTCTTCGGAGGCTGATCACTCTGGATTCCCAGGGAAACCCGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AACAGAAGAGAGACCTTATACTACCACTGCCATGTAAACCAAAGACAGACTTTCCAGGGCGAAAGTTTTTaGCAACTGCTGTGTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NRRETLYYHCHVNQRQTFQGESF*QLLCAP Trigger: TGGTGCACACAGCAGTTGCAAAAAACTTTCGCCCTG...GAAAGTCTGTCTTTGGTTTACATGGCAGTGGTAGTATAAGGTCTCTCTTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AACAAGTGCTTCCTGAGAAGGGCTAAAGGGACCAGTGAAAAATCTCACTTCAAAGCAGGAACTTCCTGTTaGTTTCGTCCTTTCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: NKCFLRRAKGTSEKSHFKAGTSC*FRPFLL Trigger: TAGGAGGAAAGGACGAAACAAACAGGAAGTTCCTGC...TTTGAAGTGAGATTTTTCACTGGTCCCTTTAGCCCTTCTCAGGAAGCACTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTAAATCTAAAGGTGTTTaGACCTCCACAGCTACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NPKGPADSTLVHKTPLCCKSKGV*TSTATS Trigger: TGACGTAGCTGTGGAGGTCAAAACACCTTTAGATTT...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AATACTGCATGTGTACATCACTGGAACAAGAATCTGTTCGGGTTTCCCTGGGAATTCTTTACGGAGTTGTaGCTTTCTTGTGCCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NTACVHHWNKNLFGFPWEFFTEL*LSCALA Trigger: GGCTAAGGCACAAGAAAGCAACAACTCCGTAAAGAA...TTCCCAGGGAAACCCGAACAGATTCTTGTTCCAGTGATGTACACATGCAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CAATGCTATGCAACAGGCAGTTCACAGTCGAGTGAACATCAATGTGGAATGAGTAAATCTAAAGGTGTTTaGACCTCCACAGCTACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QCYATGSSQSSEHQCGMSKSKGV*TSTATS Trigger: TGACGTAGCTGTGGAGGTCAAAACACCTTTAGATTT...ACTCATTCCACATTGATGTTCACTCGACTGTGAACTGCCTGTTGCATAGCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | GGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTTTCTTCTTTACGGAGTaGTTGCTTTCTTGTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GPADSTLVHKTPLCCIVPFFFTE*LLSCAL Trigger: TAAGGCACAAGAAAGCAACAACTCCGTAAAGAAGAA...AGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTTTCTTCTTTACGGAGTaGTTGCTTTCTTGTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NPKGPADSTLVHKTPLCCFFFTE*LLSCAL Trigger: TAAGGCACAAGAAAGCAACAACTCCGTAAAGAAGAA...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | GGAATTCTAGCTTTCCACTCTGAGAGATTTGGGTTAGAAGCTGAGCATGGGGCTGTTTCTGACTTTTGTTaGAGTCCCGCTGTAAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: GILAFHSERFGLEAEHGAVSDFC*SPAVKY Trigger: ATATTTTACAGCGGGACTCAAACAAAAGTCAGAAAC...AGCCCCATGCTCAGCTTCTAACCCAAATCTCTCAGAGTGGAAAGCTAGAATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTATTTCTCGCTCAACTTaGGACAGCCACTGGTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KGPADSTLVHKTPLCCIVISRST*DSHWLE Trigger: TTCTAACCAGTGGCTGTCCAAAGTTGAGCGAGAAAT...AACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CACTTTATACACAGAGGTCCAACAGAACACGAGAGAGAATACTGCATGTGTACAATTTCTCGCTCAACTTaGGACAGCCACTGGTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HFIHRGPTEHEREYCMCTISRST*DSHWLE Trigger: TTCTAACCAGTGGCTGTCCAAAGTTGAGCGAGAAAT...TGTACACATGCAGTATTCTCTCTCGTGTTCTGTTGGACCTCTGTGTATAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTTTTTCCCTGCTCCTGAAATaGTTTCTGGGACAAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PADSTLVHKTPLCCIVPFSLLLK*FLGQAI Trigger: GATTGCTTGTCCCAGAAACAATTTCAGGAGCAGGGA...AAAAGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | AATCCCAAAGGCCCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTAAGATCTTCTATGAATaGACCCTTTTTGCCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: NPKGPADSTLVHKTPLCCKIFYE*TLFALI Trigger: AATGAGGGCAAAAAGGGTCAATTCATAGAAGATCTT...ACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGGGCCTTTGGGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS-3UTR CAA 90 bp | CCAGCGGATAGCACTTTAGTACACAAGACTCCACTATGTTGTATAGTTCCTTTTGAACTGCTCCTGAAATaGTTTCTGGGACAAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PADSTLVHKTPLCCIVPFELLLK*FLGQAI Trigger: GATTGCTTGTCCCAGAAACAATTTCAGGAGCAGTTC...AAAAGGAACTATACAACATAGTGGAGTCTTGTGTACTAAAGTGCTATCCGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 |
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| CDS-3UTR CAA 90 bp | ACATTCTCATTTCACCATAGGCTTATGTTAAACAAAGATTCCTCAGACATCCTACAGGGCGAAAGTTTTTaGCAACTGCTGTGTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TFSFHHRLMLNKDSSDILQGESF*QLLCAP Trigger: TGGTGCACACAGCAGTTGCAAAAAACTTTCGCCCTG...TAGGATGTCTGAGGAATCTTTGTTTAACATAAGCCTATGGTGAAATGAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS CAA 90 bp | GGTCCTGGATTCGCAGCTGGTGCTGATGTAAACTGGGCTCTAGTCTaGGTCCTGCCGAGAGTGAAGTCTTCTTCTGTGGGGTTGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGFAAGADVNWALV*VLPRVKSSSVGLSQ Trigger: CTGGCTCAACCCCACAGAAGAAGACTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTTTACATCAGCACCAGCTGCGAATCCAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS TCA 72 bp | TCCTGGAATTCTTGGTCCTGGATTCGCAGCTGGTGCTaGTGTAAACTGGGCTCTAGTCTTGGTCCTGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SWNSWSWIRSWC*CKLGSSLGPAE Trigger: CTCGGCAGGACCAAGACTAGAGCCCAGTTTACATCAGCACCAGCTGCGAATCCAGGACCAAGAATTCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS TCA 72 bp | TTTCCCACGAAGAAGACGATAGGTAGCCTGGAGTTCTaGGACTTCCTGAGGGGAAGGTCTTTTGCCCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FPTKKTIGSLEF*DFLRGRSFARG Trigger: GCCACGGGCAAAAGACCTTCCCCTCAGGAAGTCTCAGAACTCCAGGCTACCTATCGTCTTCTTCGTGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS CAA 72 bp | TTCGCAGCTGGTGCTGATGTAAACTGGGCTCTAGTCTaGGTCCTGCCGAGAGTGAAGTCTTCTTCTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FAAGADVNWALV*VLPRVKSSSVG Trigger: CCCCACAGAAGAAGACTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTTTACATCAGCACCAGCTGCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS TCA 72 bp | GAACTCCCAAAGGCTCTTCACAAGATCTATCCAACGTaGCCAGTGACTGGTTCAAAGTCCCACTGGCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: ELPKALHKIYPT*PVTGSKSHWQW Trigger: CCATTGCCAGTGGGACTTTGAACCAGTCACTGGTCACGTTGGATAGATCTTGTGAAGAGCCTTTGGGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS CCA 72 bp | GGCTCTTCACAAGATCTATCCAACGTGACCAGTGACTaGTTCAAAGTCCCACTGGCAATGGCTTGTATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GSSQDLSNVTSD*FKVPLAMACIV Trigger: GACAATACAAGCCATTGCCAGTGGGACTTTGAACCAGTCACTGGTCACGTTGGATAGATCTTGTGAAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS TCA 72 bp | CAAAGGCTCTTCACAAGATCTATCCAACGTGACCAGTaGCTGGTTCAAAGTCCCACTGGCAATGGCTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: QRLFTRSIQRDQ*LVQSPTGNGLY Trigger: ATACAAGCCATTGCCAGTGGGACTTTGAACCAGTCACTGGTCACGTTGGATAGATCTTGTGAAGAGCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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| CDS CAA 90 bp | CTCTTGATCATTCTTTTGCCATTTGGTTATAAGATCTTCTATGAATaGACCCTTTTTGCCCTCATTTCCCTGGAGAAGGTCTGTCACATA | + |
|
Preference number: 6 (lower is better) Translates to: LLIILLPFGYKIFYE*TLFALISLEKVCHI Trigger: TATGTGACAGACCTTCTCCAGGGAAATGAGGGCAAAAAGGGTCAATTCATAGAAGATCTTATAACCAAATGGCAAAAGAATGATCAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117083.2 ENSMUST00000119245.8 ENSMUST00000122410.8 ENSMUST00000179395.8 |
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