Pregenerated sensors for TRIP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021188Ensembl transcript IDs: ENSMUST00000021605.14, ENSMUST00000176728.2, ENSMUST00000177183.8, ENSMUST00000177480.2, ENSMUST00000177536.8
Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAGTGCTGGGCAGCCGTGGGCACAGAGCCCCTGTGGGGCCAACTaGCAGCTGAGTAGAGCAAACAAATGCTCAATTCAAGACGTTTTT | + |
|
Preference number: 1 (lower is better) Translates to: LSAGQPWAQSPCGAN*QLSRANKCSIQDVF Trigger: AAAAACGTCTTGAATTGAGCATTTGTTTGCTCTACTCAGCTGTCAGTTGGCCCCACAGGGGCTCTGTGCCCACGGCTGCCCAGCACTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 90 bp | GAGTCTTCTGACTCTAAGAGGTGGTCACGCAGTCTCTGTAGCTCCTaGTTCAGCCGGGATTCTTTGTCCCGTAAGCGCTGGACCTCATTC | + |
|
Preference number: 1 (lower is better) Translates to: ESSDSKRWSRSLCSS*FSRDSLSRKRWTSF Trigger: GAATGAGGTCCAGCGCTTACGGGACAAAGAATCCCGGCTGAACCAGGAGCTACAGAGACTGCGTGACCACCTCTTAGAGTCAGAAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| 3UTR TCA 90 bp | AGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTaGAACGGCCTCCAGAGTAAGCACAGAGCGCTGCACCCCACACAG | + |
|
Preference number: 1 (lower is better) Translates to: RFRNTWKSQHLVLVH*NGLQSKHRALHPTQ Trigger: CTGTGTGGGGTGCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTaGACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCACCCCA | + |
|
Preference number: 1 (lower is better) Translates to: EKGLEILGSPNTWCW*TETASRVSTERCTP Trigger: TGGGGTGCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 90 bp | TTGGAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTaGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCACC | + |
|
Preference number: 1 (lower is better) Translates to: LEKGLEILGSPNTWC*CTETASRVSTERCT Trigger: GGTGCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 90 bp | ACGGCTTTGGAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTaGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGC | + |
|
Preference number: 1 (lower is better) Translates to: TALEKGLEILGSPNT*CWCTETASRVSTER Trigger: GCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTCCAAAGCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 90 bp | AGCCCACTCGCAGCAGTTACAACACTGCACCAAGTCTGTGGCTTCTaGTGCAAAACTCAATCACAAATTCCACCAATCTCAAGAGCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: SPLAAVTTLHQVCGF*CKTQSQIPPISRAD Trigger: ATCTGCTCTTGAGATTGGTGGAATTTGTGATTGAGTTTTGCATCAGAAGCCACAGACTTGGTGCAGTGTTGTAACTGCTGCGAGTGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 90 bp | CAGTTCAAATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTaGCTTGATCTTCTTGCATCCTCGGTGATTAAAGCATCTAAAGAC | + |
|
Preference number: 1 (lower is better) Translates to: QFKWFSSSPVPPSRS*LDLLASSVIKASKD Trigger: GTCTTTAGATGCTTTAATCACCGAGGATGCAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATTTGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 90 bp | GTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTaGAGAGCACTTTCTGCTCCATGTACAGAAGCCTTTATTAGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: VLCRAQGPLQVINMY*RALSAPCTEAFIRH Trigger: ATGCCTAATAAAGGCTTCTGTACATGGAGCAGAAAGTGCTCTGCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 90 bp | GTAAATTCACAAACAACCCAAGTTAGCACTGACAGGCGCCAGGACTaGCGACGCTTTCTTAGTCTCATTTCCACTGTTCCTTGCTTATAT | + |
|
Preference number: 1 (lower is better) Translates to: VNSQTTQVSTDRRQD*RRFLSLISTVPCLY Trigger: ATATAAGCAAGGAACAGTGGAAATGAGACTAAGAAAGCGTCGGCAGTCCTGGCGCCTGTCAGTGCTAACTTGGGTTGTTTGTGAATTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 90 bp | GAACCTACACATATGATGAAATTGCATAGAACCAAATACCTGCCTTaGCTCAGTGCACTAATAACCTCCCAGGACCAGCTTTGTTCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: EPTHMMKLHRTKYLP*LSALITSQDQLCSL Trigger: CAGAGAACAAAGCTGGTCCTGGGAGGTTATTAGTGCACTGAGGCAAGGCAGGTATTTGGTTCTATGCAATTTCATCATATGTGTAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 90 bp | GAAGAACTGTGGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTaGAGAAAGACATCCACAGCCCACTCGCAGCAGTTACAACACTGC | + |
|
Preference number: 1 (lower is better) Translates to: EELWLPMQNSTTNSK*RKTSTAHSQQLQHC Trigger: GCAGTGTTGTAACTGCTGCGAGTGGGCTGTGGATGTCTTTCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCCACAGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 90 bp | TACTCCACAATAAAAAGAAACAAACTACTGACCCATGAAACAGCTTaGATGGATCCCAAGGGAATTATGTTAAGTGAAAAACACCCATTT | + |
|
Preference number: 1 (lower is better) Translates to: YSTIKRNKLLTHETA*MDPKGIMLSEKHPF Trigger: AAATGGGTGTTTTTCACTTAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTTTCTTTTTATTGTGGAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 90 bp | AAGAGTGCATTGGCTGTAGCTCTATATAGAACACAATGGAACAGTTaGAAATCTCTCACATTTAGATACCTTCCTATAAATCAAGACAAT | + |
|
Preference number: 1 (lower is better) Translates to: KSALAVALYRTQWNS*KSLTFRYLPINQDN Trigger: ATTGTCTTGATTTATAGGAAGGTATCTAAATGTGAGAGATTTCCAACTGTTCCATTGTGTTCTATATAGAGCTACAGCCAATGCACTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CAA 90 bp | AGGTGGTCACGCAGTCTCTGTAGCTCCTGGTTCAGCCGGGATTCTTaGTCCCGTAAGCGCTGGACCTCATTCTGCAGGGTACTGGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RWSRSLCSSWFSRDS*SRKRWTSFCRVLVS Trigger: GGAAACCAGTACCCTGCAGAATGAGGTCCAGCGCTTACGGGACAAAGAATCCCGGCTGAACCAGGAGCTACAGAGACTGCGTGACCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| 3UTR-3UTR TCA 90 bp | GCACCCCACACAGGGAAAGCTCACACTGAGGCAGGAGGTGACGGGTCTCAGGATTGTGTGTGTGTGTTTTaGAGGAGGAGTTCACTATGG | + |
|
Preference number: 2 (lower is better) Translates to: APHTGKAHTEAGGDGSQDCVCVF*RRSSLW Trigger: CCATAGTGAACTCCTCCTTCAAAACACACACACACA...ATCCTGAGACCCGTCACCTCCTGCCTCAGTGTGAGCTTTCCCTGTGTGGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAAGAACTGTGGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGAAGTGCTGGGCAGCCGTaGGCACAGAGCCCCTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: CEELWLPMQNSTTNSKCRSAGQP*AQSPCG Trigger: CCCACAGGGGCTCTGTGCCCACGGCTGCCCAGCACT...TCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCCACAGTTCTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CCA 90 bp | GACTCTAAGAGGTGGTCACGCAGTCTCTGTAGCTCCTGGTTCAGCCGGGATTCTCATTCTGCAGGGTACTaGTTTCCATTTGCTTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: DSKRWSRSLCSSWFSRDSHSAGY*FPFASV Trigger: AACAGAAGCAAATGGAAACCAGTACCCTGCAGAATG...AGAATCCCGGCTGAACCAGGAGCTACAGAGACTGCGTGACCACCTCTTAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACTTGGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCGCTCTAAGGTTTACGTaGATACAGCCATACATAAAG | + |
|
Preference number: 2 (lower is better) Translates to: NTWCWCTETASRVSTERCALRFT*IQPYIK Trigger: CTTTATGTATGGCTGTATCCACGTAAACCTTAGAGC...GCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR GCA 90 bp | CGCCAGGACTGCCGACGCTTTCTTAGTCTCATTTCCACTGTTCCTTGCTTATATCCTAAGCAATCCTCTTaGTTCTGTCTCTCAGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RQDCRRFLSLISTVPCLYPKQSS*FCLSGG Trigger: ACCACCTGAGAGACAGAAGCAAGAGGATTGCTTAGG...ATATAAGCAAGGAACAGTGGAAATGAGACTAAGAAAGCGTCGGCAGTCCTGGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGAAAGACATCCACAGTCTCTCTCCTCTCAGTaGTGGGCAGCCGTGGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: GFQCKIQLQILSAERHPQSLSSQ*WAAVGT Trigger: TGTGCCCACGGCTGCCCAGCACTGAGAGGAGAGAGA...CTGTGGATGTCTTTCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR GCA 90 bp | AATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTGACTTGATCTTCTTGTTGCAGAGCACTTTCTaGTCCATGTACAGAAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: NGFHLHLCLPPVADLIFLLQSTF*SMYRSL Trigger: AAGGCTTCTGTACATGGAGCAGAAAGTGCTCTGCAA...CAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR GCA 90 bp | CTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAAGTGAACCTGCCTTGCCTCAGTaGACTAATAACCTCCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLTHETAWMDPKGIMLSEPALPQ*TNNLPG Trigger: TCCTGGGAGGTTATTAGTGCACTGAGGCAAGGCAGG...TTCACTTAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATTTAGAAAACGGCAGCTaGAGGAGCTTTCTGATGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KASKDFLGDADADAELADLENGS*RSFLMN Trigger: GTTCATCAGAAAGCTCCTCCAGCTGCCGTTTTCTAA...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CCA 90 bp | TCAACTGTGGAGTTGGCCAAAATGATACACACTAAACTGAAACCACGCCTCGGAATCAGCAAAACTGGCTaGAGCAACGTAGCATTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: STVELAKMIHTKLKPRLGISKTG*SNVAFP Trigger: TGGAAATGCTACGTTGCTCCAGCCAGTTTTGCTGAT...TCCGAGGCGTGGTTTCAGTTTAGTGTGTATCATTTTGGCCAACTCCACAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR GCA 90 bp | CGCCAGGACTGCCGACGCTTTCTTAGTCTCATTTCCACTGTTCCTTGCTTATATAGTTACGTGTATTTGTaGGTTTGTGCAAGAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: RQDCRRFLSLISTVPCLYSYVYL*VCARKP Trigger: AGGTTTTCTTGCACAAACGCACAAATACACGTAACT...ATATAAGCAAGGAACAGTGGAAATGAGACTAAGAAAGCGTCGGCAGTCCTGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CCA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCATTTCTGATGAACAGTTaGATCCTGATCGAGATGGTC | + |
|
Preference number: 2 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAFLMNS*ILIEMV Trigger: GACCATCTCGATCAGGATCCAACTGTTCATCAGAAA...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CCA 90 bp | AATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTGACTTGATCTTCTTGTGTTGTGAAGAACTGTaGCTTCCAATGCAAAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: NGFHLHLCLPPVADLIFLCCEEL*LPMQNS Trigger: TGAATTTTGCATTGGAAGCCACAGTTCTTCACAACA...CAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CAA 90 bp | AGTAGACCCTCAACTTACAATGGCTTAACTGTTTCAACTGTGGAGTaGGCCAAAATGATACACACTAAACTGAAACCACGCCTCGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: SRPSTYNGLTVSTVE*AKMIHTKLKPRLGF Trigger: AAATCCGAGGCGTGGTTTCAGTTTAGTGTGTATCATTTTGGCCAACTCCACAGTTGAAACAGTTAAGCCATTGTAAGTTGAGGGTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR TCA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCAAAAGAAACAAACTACTaGCCCATGAAACAGCTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAKETNY*PMKQLG Trigger: TCCAAGCTGTTTCATGGGTCAGTAGTTTGTTTCTTT...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTGGAAGTCCCAACACTTaGTGTTGGTGCACTGAAACG | + |
|
Preference number: 2 (lower is better) Translates to: SGLDQCICRMHTTEMLGTGSPNT*CWCTET Trigger: CGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCC...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR TCA 90 bp | CAACACCTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAACTACAAACAAATAAATaGCTCTTTCTAGAAGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QHLQASKHIRNMQVTPGKLQTNK*LFLEGH Trigger: GTGGCCTTCTAGAAAGAGTCATTTATTTGTTTGTAG...TTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAGGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCTGTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTGCGACATTTACTATTCTTaGCTCTCCTTTAGAGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: FSVLCRAQGPLQVINMYCDIYYS*LSFRVL Trigger: CAAAACTCTAAAGGAGAGGCAAGAATAGTAAATGTC...GCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR GCA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCAGTATTTGTGCGTTTGTaGAAGAAAACCTTATGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAVFVRL*KKTLWF Trigger: AAACCATAAGGTTTTCTTGCACAAACGCACAAATAC...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAATTCAAGAGTGCATTGGCTGTAGCTCTATATAGAACACAATGGAACAGTGCTCTTGAAACTAAATaGTCCCATCTAGTTACTCAC | + |
|
Preference number: 2 (lower is better) Translates to: EKFKSALAVALYRTQWNSALETK*SHLVTH Trigger: GTGAGTAACTAGATGGGATCATTTAGTTTCAAGAGC...ACTGTTCCATTGTGTTCTATATAGAGCTACAGCCAATGCACTCTTGAATTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAATTCAAGAGTGCATTGGCTGTAGCTCTATATAGAACACAATGGAACAGTATGAAACAGCTTGGATaGATCCCAAGGGAATTATGT | + |
|
Preference number: 2 (lower is better) Translates to: EKFKSALAVALYRTQWNSMKQLG*IPRELC Trigger: ACATAATTCCCTTGGGATCCATCCAAGCTGTTTCAT...ACTGTTCCATTGTGTTCTATATAGAGCTACAGCCAATGCACTCTTGAATTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR TCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTAATATGTAAGAAGACATaGCTTGTACATGTACAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FTKHIKTSISRPSTYNGLICKKT*LVHVQC Trigger: GCACTGTACATGTACAAGTCATGTCTTCTTACATAT...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR GCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTATATATATCAGATACTTaGTCTTCTGACACCTGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: FTKHIKTSISRPSTYNGLYISDT*SSDTCN Trigger: ATTGCAGGTGTCAGAAGAGCAAGTATCTGATATATA...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 72 bp | TGGCTGATGCTGAGCTGGCCAGCTGCATGCCCTGCGTaGCATCTCAGTTTTGACGATGTGCTTTGGTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: WLMLSWPAACPA*HLSFDDVLWFP Trigger: GGGGAACCAAAGCACATCGTCAAAACTGAGATGGCACGCAGGGCATGCAGCTGGCCAGCTCAGCATCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | GGGCAGCCGTGGGCACAGAGCCCCTGTGGGGCCAACTaGCAGCTGAGTAGAGCAAACAAATGCTCAATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GQPWAQSPCGAN*QLSRANKCSIQ Trigger: TTGAATTGAGCATTTGTTTGCTCTACTCAGCTGTCAGTTGGCCCCACAGGGGCTCTGTGCCCACGGCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 72 bp | ATGCTGAGCTGGCTGATGCTGAGCTGGCCAGCTGCATaGCCTGCGTGCCATCTCAGTTTTGACGATGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: MLSWLMLSWPAA*PACHLSFDDVL Trigger: AAGCACATCGTCAAAACTGAGATGGCACGCAGGGCATGCAGCTGGCCAGCTCAGCATCAGCCAGCTCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 72 bp | TCCTGGTTCAGCCGGGATTCTTTGTCCCGTAAGCGCTaGACCTCATTCTGCAGGGTACTGGTTTCCATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SWFSRDSLSRKR*TSFCRVLVSIC Trigger: GCAAATGGAAACCAGTACCCTGCAGAATGAGGTCCAGCGCTTACGGGACAAAGAATCCCGGCTGAACCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| 3UTR TCA 72 bp | AATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTaGAACGGCCTCCAGAGTAAGCACAGAGCGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NTWKSQHLVLVH*NGLQSKHRALH Trigger: GTGCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | CGTGGGCACAGAGCCCCTGTGGGGCCAACTGACAGCTaGGTAGAGCAAACAAATGCTCAATTCAAGACGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RGHRAPVGPTDS*VEQTNAQFKTF Trigger: AAACGTCTTGAATTGAGCATTTGTTTGCTCTACTCAGCTGTCAGTTGGCCCCACAGGGGCTCTGTGCCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | AGGGTGGGTTTATTGGGCTGTGTGCCCACTGTAAGTTaGGGGGCATCTGTAACATCAGCAAAACTGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RVGLLGCVPTVS*GASVTSAKLAG Trigger: TCCAGCCAGTTTTGCTGATGTTACAGATGCCCCTCAACTTACAGTGGGCACACAGCCCAATAAACCCACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | TGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTaGCTTGATCTTCTTGCATCCTCGGTGATTAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WFSSSPVPPSRS*LDLLASSVIKA Trigger: TGCTTTAATCACCGAGGATGCAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 72 bp | AAGACATCCACAGCCCACTCGCAGCAGTTACAACACTaGACCAAGTCTGTGGCTTCTGATGCAAAACTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KTSTAHSQQLQH*TKSVASDAKLN Trigger: ATTGAGTTTTGCATCAGAAGCCACAGACTTGGTGCAGTGTTGTAACTGCTGCGAGTGGGCTGTGGATGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 72 bp | GGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTaGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLEILGSPNTWC*CTETASRVSTE Trigger: CTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 72 bp | CCCACTCGCAGCAGTTACAACACTGCACCAAGTCTGTaGCTTCTGATGCAAAACTCAATCACAAATTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: PTRSSYNTAPSL*LLMQNSITNST Trigger: GGTGGAATTTGTGATTGAGTTTTGCATCAGAAGCCACAGACTTGGTGCAGTGTTGTAACTGCTGCGAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | CCTCCCGTAGCTGACTTGATCTTCTTGCATCCTCGGTaGTTAAAGCATCTAAAGACTTTCTGGGTGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPVADLIFLHPR*LKHLKTFWVML Trigger: CAGCATCACCCAGAAAGTCTTTAGATGCTTTAATCACCGAGGATGCAAGAAGATCAAGTCAGCTACGGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 72 bp | AGCGTCCTGTTGGAATCACTGAACAAGTGTGCTTCTTaGACTCTGCTGAGAAGTCTCTTTGAGCAGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVLLESLNKCAS*TLLRSLFEQMV Trigger: AACCATCTGCTCAAAGAGACTTCTCAGCAGAGTGCAAGAAGCACACTTGTTCAGTGATTCCAACAGGACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 72 bp | AAGTTGAGGGGCATCTGTAACATCAGCAAAACTGGCTaGAGCAACGTAGCATTTCCATTAACTCTGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KLRGICNISKTG*SNVAFPLTLRA Trigger: TGCCCTCAGAGTTAATGGAAATGCTACGTTGCTCCAGCCAGTTTTGCTGATGTTACAGATGCCCCTCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 72 bp | AGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTaGAGAGCACTTTCTGCTCCATGTACAGAAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RAQGPLQVINMY*RALSAPCTEAF Trigger: AAAGGCTTCTGTACATGGAGCAGAAAGTGCTCTGCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 72 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTaGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EKGLEILGSPNT*CWCTETASRVS Trigger: GCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CAA 90 bp | AATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTGACTTGATCTTCTTGCAGCAGGGTGAATTCTaGATAGTGTATTTCACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: NGFHLHLCLPPVADLIFLQQGEF*IVYFTV Trigger: TACAGTGAAATACACTATCAAGAATTCACCCTGCTG...CAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | CCACAGCAGCCTTCAGACTTAGGTTACATGAAACAGTaGGGGAGGGAAGGTTGTTTTAGTCAAAGAACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PQQPSDLGYMKQ*GREGCFSQRTS Trigger: TGAAGTTCTTTGACTAAAACAACCTTCCCTCCCTCACTGTTTCATGTAACCTAAGTCTGAAGGCTGCTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | GCAGCAGTTACAACACTGCACCAAGTCTGTGGCTTCTaGTGCAAAACTCAATCACAAATTCCACCAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AAVTTLHQVCGF*CKTQSQIPPIS Trigger: TGAGATTGGTGGAATTTGTGATTGAGTTTTGCATCAGAAGCCACAGACTTGGTGCAGTGTTGTAACTGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR GCA 72 bp | CATATGATGAAATTGCATAGAACCAAATACCTGCCTTaGCTCAGTGCACTAATAACCTCCCAGGACCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HMMKLHRTKYLP*LSALITSQDQL Trigger: AAGCTGGTCCTGGGAGGTTATTAGTGCACTGAGGCAAGGCAGGTATTTGGTTCTATGCAATTTCATCATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAGTGTGTGTGTGTGTTTaGAAGGAGGAGTTCACTATG | + |
|
Preference number: 3 (lower is better) Translates to: EKGLEILGSPNTWCWCTEVCVCV*KEEFTM Trigger: CATAGTGAACTCCTCCTTCAAAACACACACACACAC...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR-3UTR CAA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTATGTGCCCACTGTAAGTaGAGGGGCATCTGTAACATC | + |
|
Preference number: 3 (lower is better) Translates to: FTKHIKTSISRPSTYNGLCAHCK*RGICNI Trigger: GATGTTACAGATGCCCCTCAACTTACAGTGGGCACA...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | GTACTCCACAATAAAAAGAAACAAACTACTGACCCATaGAACAGCTTGGATGGATCCCAAGGGAATTATGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLHNKKKQTTDP*NSLDGSQGNYV Trigger: AACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTTTCTTTTTATTGTGGAGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CCA 72 bp | TCTCAGGATATTGCTAACAGTGCTCTAAGGTTTACGTaGATACAGCCATACATAAAGTGTAACCTTACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SQDIANSALRFT*IQPYIKCNLTE Trigger: TTCTGTAAGGTTACACTTTATGTATGGCTGTATCCACGTAAACCTTAGAGCACTGTTAGCAATATCCTGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR TCA 72 bp | AACAGCTTGGATGGATCCCAAGGGAATTATGTTAAGTaGAAAACACCCATTTCAAGAGGTTACATAACGTAT | + |
|
Preference number: 3 (lower is better) Translates to: NSLDGSQGNYVK*KTPISRGYITY Trigger: ATACGTTATGTAACCTCTTGAAATGGGTGTTTTTCACTTAACATAATTCCCTTGGGATCCATCCAAGCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | GCACCCCACACAGGGAAAGCTCACACTGAGGCAGGAGGTGACGGGTCTCAGGATAGGTCCATGTCCAGCTaGGTTAATAAGGGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: APHTGKAHTEAGGDGSQDRSMSS*VNKGHS Trigger: GCTGTGCCCCTTATTAACCCAGCTGGACATGGACCT...ATCCTGAGACCCGTCACCTCCTGCCTCAGTGTGAGCTTTCCCTGTGTGGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | CTCCAGAGTAAGCACAGAGCGCTGCACCCCACACAGGGAAAGCTCACACTGAGGGAGGAGATCCTGGCATaGAGAGCCTGTATCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQSKHRALHPTQGKLTLREEILA*RACISK Trigger: CTTGGAGATACAGGCTCTTCATGCCAGGATCTCCTC...CCTCAGTGTGAGCTTTCCCTGTGTGGGGTGCAGCGCTCTGTGCTTACTCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | GCACCCCACACAGGGAAAGCTCACACTGAGGCAGGAGGTGACGGGTCTCAGGATTCTGACTCTAAGAGGTaGTCACGCAGTCTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: APHTGKAHTEAGGDGSQDSDSKR*SRSLCS Trigger: GCTACAGAGACTGCGTGACCACCTCTTAGAGTCAGA...ATCCTGAGACCCGTCACCTCCTGCCTCAGTGTGAGCTTTCCCTGTGTGGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CAA 72 bp | GCTGGCCAGCTGCATGCCCTGCGTGCCATCTCAGTTTaGACGATGTGCTTTGGTTCCCCTGCCCCCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGQLHALRAISV*TMCFGSPAPFK Trigger: TTTAAAGGGGGCAGGGGAACCAAAGCACATCGTCAAAACTGAGATGGCACGCAGGGCATGCAGCTGGCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GCACCCCACACAGGGAAAGCTCACACTGAGGCAGGAGGTGACGGGTCTCAGGATAGCTCCTCTTGCAAGTaGTTGTTCTCTTCTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: APHTGKAHTEAGGDGSQDSSSCK*LFSSFM Trigger: CATGAAAGAAGAGAACAATCACTTGCAAGAGGAGCT...ATCCTGAGACCCGTCACCTCCTGCCTCAGTGTGAGCTTTCCCTGTGTGGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTGCAAGGGGCACAGCTGCTaGGCGGGGAGCCAAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVLCRAQGPLQVINMYCKGHSC*AGSQEW Trigger: CCATTCTTGGCTCCCCGCTCAGCAGCTGTGCCCCTT...GCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCACAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CTCCAGAGTAAGCACAGAGCGCTGCACCCCACACAGGGAAAGCTCACACTGAGGTACAAAGCTGCCCTATaGTATGCTGAACTTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSKHRALHPTQGKLTLRYKAAL*YAELVP Trigger: TGGCACAAGTTCAGCATAGCATAGGGCAGCTTTGTA...CCTCAGTGTGAGCTTTCCCTGTGTGGGGTGCAGCGCTCTGTGCTTACTCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AACACTTGGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCCTCATCAGTTTCTTCTaGGCGTCGTCCAGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTWCWCTETASRVSTERCLISFF*ASSSIS Trigger: AGAGATGCTGGACGACGCGCAGAAGAAACTGATGAG...GCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GCACCCCACACAGGGAAAGCTCACACTGAGGCAGGAGGTGACGGGTCTCAGGATTGTCCTTTTCTCGAATaGTCCGGGATAAATTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: APHTGKAHTEAGGDGSQDCPFLE*SGINSE Trigger: TTCAGAATTTATCCCGGATCATTCGAGAAAAGGACA...ATCCTGAGACCCGTCACCTCCTGCCTCAGTGTGAGCTTTCCCTGTGTGGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTGACTTGATCTTCTTGTGCCGCAGAGCACTCTaGTGGGCTTCACTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NGFHLHLCLPPVADLIFLCRRAL*WASLSS Trigger: GGAACTCAGTGAAGCCCAGCAGAGTGCTCTGCGGCA...CAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | GCACCCCACACAGGGAAAGCTCACACTGAGGCAGGAGGTGACGGGTCTCAGGATCTAAAAGAAGGTCCTTaGTATTACAAAGCTGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: APHTGKAHTEAGGDGSQDLKEGP*YYKAAL Trigger: TAGGGCAGCTTTGTAATACCAAGGACCTTCTTTTAG...ATCCTGAGACCCGTCACCTCCTGCCTCAGTGTGAGCTTTCCCTGTGTGGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AACACTTGGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCTTGCAGATTTCAGTTTaGTCAGAGCTTTGTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTWCWCTETASRVSTERCLQISV*SELCAP Trigger: GGGAGCACAAAGCTCTGATCAAACTGAAATCTGCAA...GCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AACACTTGGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCTGGTCATCGAGGTCCTaGCTTCTGTTCTGTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NTWCWCTETASRVSTERCWSSRS*LLFCLS Trigger: ACTTAAACAGAACAGAAGTCAGGACCTCGATGACCA...GCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTCACGCAGTCTCTGTAGCTCCTGGTTCAGCCGGGATTCTTTGTCCCGTTGCCTTCTCTCTCATTaGATGGCATTCAAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RWSRSLCSSWFSRDSLSRCLLSH*MAFKLL Trigger: AAGGAGTTTGAATGCCATTCAATGAGAGAGAAGGCA...ACGGGACAAAGAATCCCGGCTGAACCAGGAGCTACAGAGACTGCGTGACCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| CDS-3UTR TCA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCACTTCAGGCCATGGACTaGCAGCTTTGGAGGCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLNSTHAGDYIQSTPTALQAMD*QLWRRD Trigger: GTCCCGCCTCCAAAGCTGTCAGTCCATGGCCTGAAG...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATAGCTCTTCCTGGAGCTaGGCAGACTCGTGCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KASKDFLGDADADAELADSSSWS*ADSCCM Trigger: CATGCAGCACGAGTCTGCCCAGCTCCAGGAAGAGCT...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TCACGCAGTCTCTGTAGCTCCTGGTTCAGCCGGGATTCTTTGTCCCGTAAGCGCTGGAAAACTTCATGTTaGTCTCTTGTAACGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSLCSSWFSRDSLSRKRWKTSC*SLVTPG Trigger: ACCAGGCGTTACAAGAGACCAACATGAAGTTTTCCA...GCGCTTACGGGACAAAGAATCCCGGCTGAACCAGGAGCTACAGAGACTGCGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGAGTAAGCACAGAGCGCTGCACCCCACACAGGGAAAGCTCACACTGAGGCTGAAAAAGAACTATTaGACACAGACTGCTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQSKHRALHPTQGKLTLRLKKNY*TQTADL Trigger: CAAATCAGCAGTCTGTGTTCAATAGTTCTTTTTCAG...CCTCAGTGTGAGCTTTCCCTGTGTGGGGTGCAGCGCTCTGTGCTTACTCTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CAACACCTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAACATCCTTCACGTTCCTaGTGGAGCCCTGGGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHLQASKHIRNMQVTPGKHPSRS*WSPGFG Trigger: CCCAAACCCAGGGCTCCAGCAGGAACGTGAAGGATG...TTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAGGTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TCAACTGTGGAGTTGGCCAAAATGATACACACTAAACTGAAACCACGCCTCGGATTCTGCTGGATGATCTaGGTGAGCTTGCCGACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STVELAKMIHTKLKPRLGFCWMI*VSLPTS Trigger: CGAGGTCGGCAAGCTCACGCAGATCATCCAGCAGAA...TCCGAGGCGTGGTTTCAGTTTAGTGTGTATCATTTTGGCCAACTCCACAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AGAAAACGGCAGCTGGAGGAGCTTTCTGATGAACAGTTGGATCCTGATCGAGATATTAGGGAAATCTGCTaGCACATCCTCCGTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRQLEELSDEQLDPDRDIREIC*HILRAL Trigger: GAGGGCACGGAGGATGTGCCAGCAGATTTCCCTAAT...ATCTCGATCAGGATCCAACTGTTCATCAGAAAGCTCCTCCAGCTGCCGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | CTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAAGTGAACCTAAGTGGGCTGACTaGGCAGCTGACTGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTHETAWMDPKGIMLSEPKWAD*AADCSL Trigger: CAGACTGCAGTCAGCTGCTCAGTCAGCCCACTTAGG...TTCACTTAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAACAGGACCTCTGCGACTaGGGAGCTGTGTGGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKGLEILGSPNTWCWCTEQDLCD*GAVWED Trigger: ATCCTCCCACACAGCTCCTCAGTCGCAGAGGTCCTG...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AACACTTGGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCGCTCAGTTTGGAAAGTaGTATCTGAAGTTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTWCWCTETASRVSTERCAQFGK*YLKFFL Trigger: AAGGAAGAACTTCAGATATCACTTTCCAAACTGAGC...GCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATTTGATTCTGTGCAGCTaGGACAGCTCAGACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KASKDFLGDADADAELADLILCS*DSSDSS Trigger: GCTGGAGTCTGAGCTGTCTCAGCTGCACAGAATCAA...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTGACTTGATCTTCTTGCTTCCAGATGACCCTTaGTTCTGTGCAGCTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NGFHLHLCLPPVADLIFLLPDDP*FCAAET Trigger: TGTCTCAGCTGCACAGAATCAAGGGTCATCTGGAAG...CAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CTCCAGAGTAAGCACAGAGCGCTGCACCCCACACAGGGAAAGCTCACACTGAGGTTCTTATTCTCATCTTaGAACTTAATAAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSKHRALHPTQGKLTLRFLFSS*NLIRAA Trigger: AGCAGCCCTTATTAAGTTGCAAGATGAGAATAAGAA...CCTCAGTGTGAGCTTTCCCTGTGTGGGGTGCAGCGCTCTGTGCTTACTCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACGCAGCCTCACTCCCCGTaGCAGAAGTCTGCAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLEILGSPNTWCWCTETQPHSP*QKSARL Trigger: CAGTCTTGCAGACTTCTGGCACGGGGAGTGAGGCTG...CGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CGGGATTCTTTGTCCCGTAAGCGCTGGACCTCATTCTGCAGGGTACTGGTTTCCAAATTTGTCACTGCCTaGCTCAAAAGCTCGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDSLSRKRWTSFCRVLVSKFVTA*LKSSFS Trigger: TGAAAACGAGCTTTTGAGGCAGGCAGTGACAAATTT...GGAAACCAGTACCCTGCAGAATGAGGTCCAGCGCTTACGGGACAAAGAATCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTCAAATCCTAAGCAATCCTCTTGCTTCTGTCTCTCAGGTGGTGGGATTAGTCTCTGTAGCTCCTaGTTCAGCCGGGATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LASNPKQSSCFCLSGGGISLCSS*FSRDSL Trigger: CAAAGAATCCCGGCTGAACCAGGAGCTACAGAGACT...AATCCCACCACCTGAGAGACAGAAGCAAGAGGATTGCTTAGGATTTGAGGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTGACTTGATCTTCTTGTGGAGGCGGGACAGATaGATGAGATTCTGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFHLHLCLPPVADLIFLWRRDR*MRFCFQ Trigger: CTGGAAACAGAATCTCATCCATCTGTCCCGCCTCCA...CAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CAA 72 bp | AGAAAACGGCAGCTGGAGGAGCTTTCTGATGAACAGTaGGATCCTGATCGAGATGGTCAGATGAACCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RKRQLEELSDEQ*DPDRDGQMNLH Trigger: GTGTAGGTTCATCTGACCATCTCGATCAGGATCCAACTGTTCATCAGAAAGCTCCTCCAGCTGCCGTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATCGAGTAACACCTCCTTaGTCTTCTGCAAACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KASKDFLGDADADAELADRVTPP*SSANSC Trigger: GCAGCTGTTTGCAGAAGATCAAGGAGGTGTTACTCG...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAATTCACACTGGCACATCCTCCGTaGCCTCCAACAGCATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQASKHIRNMQVTPGKFTLAHPP*PPTAYP Trigger: AGGATATGCTGTTGGAGGGCACGGAGGATGTGCCAG...TGTGAATTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTGCCTCTGGTTCAGTTCTTaGTCCTTCGCCTCCAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSVLCRAQGPLQVINMYCLWFSS*SFASRL Trigger: TAACCTGGAGGCGAAGGAGCAAGAACTGAACCAGAG...GCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCACAGAGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTACCCGTGCCAGAAGTCTaGAAGACTGTCAGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKLLTHETAWMDPKGIMLPVPEV*KTVSRV Trigger: GACCCTGCTGACAGTCTTGCAGACTTCTGGCACGGG...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AGAAAACGGCAGCTGGAGGAGCTTTCTGATGAACAGTTGGATCCTGATCGAGATGTCAACCGAAACTTGTaGCTGAAGTTGGTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRQLEELSDEQLDPDRDVNRNL*LKLVKL Trigger: GAGCTTCACCAACTTCAGGCACAAGTTTCGGTTGAC...ATCTCGATCAGGATCCAACTGTTCATCAGAAAGCTCCTCCAGCTGCCGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTGACTTGATCTTCTTGCCCTGTACCTTAGTCTaGGCAATATGTCTCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NGFHLHLCLPPVADLIFLPCTLV*AICLQC Trigger: ACATTGGAGACATATTGCTCAGACTAAGGTACAGGG...CAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATATCTCTTCTTCCAGATaGCCCTTGATTCTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KASKDFLGDADADAELADISSSR*PLILCS Trigger: GCTGCACAGAATCAAGGGTCATCTGGAAGAAGAGAT...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | CAACACCTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAATCTCATTCAGAAGCTTaGTCTCCAGCTCCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHLQASKHIRNMQVTPGKSHSEA*SPAPSP Trigger: AGGAGAGGGAGCTGGAGATCAAGCTTCTGAATGAGA...TTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAGGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTGCGGCGGGACAGATGGATaGGATTCTGTTTCCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVLCRAQGPLQVINMYCGGTDG*DSVSRN Trigger: ATTTCTGGAAACAGAATCTCATCCATCTGTCCCGCC...GCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCACAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AACACTTGGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCAGATCAAAAGCAACTTaGTCTAAATGTTCATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTWCWCTETASRVSTERCRSKAT*SKCSLS Trigger: GCTCAATGAACATTTAGAGCAAGTTGCTTTTGATCT...GCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAAGTGAACTCAGAAGACTGGCTTaGTCTAAGAGGCTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTHETAWMDPKGIMLSELRRLA*SKRLCC Trigger: GCAGCAGAGCCTCTTAGAGCAAGCCAGTCTTCTGAG...TTCACTTAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTCAAATCCTAAGCAATCCTCTTGCTTCTGTCTCTCAGGTGGTGGGATTTGCTTAGTAGCCTCTTaGTTCTGCTTGTCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LASNPKQSSCFCLSGGGICLVAS*FCLSSS Trigger: AGAACTGGACAAGCAGAACCAAGAGGCTACTAAGCA...AATCCCACCACCTGAGAGACAGAAGCAAGAGGATTGCTTAGGATTTGAGGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTTGCTGTCAAGGGTTCTaGGCTCAGGCGCGGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SGLDQCICRMHTTEMLGTCCQGF*AQARAL Trigger: TAGTGCCCGCGCCTGAGCCCAGAACCCTTGACAGCA...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AGAAAACGGCAGCTGGAGGAGCTTTCTGATGAACAGTTGGATCCTGATCGAGATAAGAGCTCCTCAAACTaGTTACTGTTAACCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKRQLEELSDEQLDPDRDKSSSN*LLLTPP Trigger: TGGAGGGGTTAACAGTAACCAGTTTGAGGAGCTCTT...ATCTCGATCAGGATCCAACTGTTCATCAGAAAGCTCCTCCAGCTGCCGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AAGAGGTGGTCACGCAGTCTCTGTAGCTCCTGGTTCAGCCGGGATTCTTTGTCCTTTCTCGTAACATCATaGAAAACTTCATGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRWSRSLCSSWFSRDSLSFLVTS*KTSCWS Trigger: AGACCAACATGAAGTTTTCCATGATGTTACGAGAAA...GGACAAAGAATCCCGGCTGAACCAGGAGCTACAGAGACTGCGTGACCACCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGACTCTAAGAGGTGGTCACGCAGTCTCTGTAGCTCCTGGTTCAGCCGGTTCTCTCTCATTGAATaGCATTCAAACTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSDSKRWSRSLCSSWFSRFSLIE*HSNSFS Trigger: AGAAAAGGAGTTTGAATGCCATTCAATGAGAGAGAA...CCGGCTGAACCAGGAGCTACAGAGACTGCGTGACCACCTCTTAGAGTCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTGCTCGTCTTTGGACAGCTaGTCGATCTGTTTAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVLCRAQGPLQVINMYCSSLDS*SICLVS Trigger: GCTAACTAAACAGATCGATCAGCTGTCCAAAGACGA...GCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCACAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAGCATGCAGCTGCTGCTaGAGGTACACAACATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKLLTHETAWMDPKGIMLACSCC*RYTTSC Trigger: ACAGGATGTTGTGTACCTTCAGCAGCAGCTGCATGC...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | TCAACTGTGGAGTTGGCCAAAATGATACACACTAAACTGAAACCACGCCTCGGATTTTCTTTCTACCTCTaGGGAAGCAGCAACAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STVELAKMIHTKLKPRLGFSFYL*GSSNRV Trigger: GACTCTGTTGCTGCTTCCTCAGAGGTAGAAAGAAAA...TCCGAGGCGTGGTTTCAGTTTAGTGTGTATCATTTTGGCCAACTCCACAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACGTGCTTCACTTGTTCCTaGGAGACAGAGAGTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGLEILGSPNTWCWCTETCFTCS*ETESCR Trigger: CCTGCAACTCTCTGTCTCTCAGGAACAAGTGAAGCA...CGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTATGGCTGCTGGTGCGCTaGCAGATCCTAAGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTKHIKTSISRPSTYNGLWLLVR*QILSGL Trigger: CAGCCCACTTAGGATCTGGCAGCGCACCAGCAGCCA...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTGCTCCAGTTCTTTCTTCTaGTCCTGTAGAGACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSVLCRAQGPLQVINMYCSSSFF*SCRDWS Trigger: ACTCCAGTCTCTACAGGAGCAGAAGAAAGAACTGGA...GCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCACAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTGGCCTCTCTGTCTTCTaGAGCCAAAGCTTCCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLDQCICRMHTTEMLGTGLSVF*SQSFPR Trigger: ACGCGGGAAGCTTTGGCTGCAGAAGACAGAGAGGCC...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACGCGGAGGAGATCCTaGCATGAAGAGCCTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: EKGLEILGSPNTWCWCTETRRRS*HEEPVS Trigger: AGATACAGGCTCTTCATGCCAGGATCTCCTCCGCGT...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAATTCACAGGAGCGTTCGAATTGTaGCATCTTTCTCCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQASKHIRNMQVTPGKFTGAFEL*HLSPAV Trigger: CACTGCAGGAGAAAGATGCCACAATTCGAACGCTCC...TGTGAATTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGAAAGACATCCACAGAGAGGCTTCAGGCCATaGACTGACAGCTTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFQCKIQLQILSAERHPQRGFRP*TDSFGG Trigger: GCCTCCAAAGCTGTCAGTCCATGGCCTGAAGCCTCT...CTGTGGATGTCTTTCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GAGAAATTCAAGAGTGCATTGGCTGTAGCTCTATATAGAACACAATGGAACAGTCAGCTGACTGCAGTCTaGGCAGTTCATCCTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKFKSALAVALYRTQWNSQLTAV*AVHPVV Trigger: CACTACAGGATGAACTGCTCAGACTGCAGTCAGCTG...ACTGTTCCATTGTGTTCTATATAGAGCTACAGCCAATGCACTCTTGAATTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTATCAGTCAAAGCTTGCTaGAATCTCAGGACCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NKLLTHETAWMDPKGIMLSVKAC*NLRTSA Trigger: CGCAGAGGTCCTGAGATTGCAGCAAGCTTTGACTGA...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCAGGAGTAGCTGCAGCTTaGTCTGGTTTTGATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAGVAAA*SGFDLQ Trigger: TTGAAGATCAAAACCAGAGCAAGCTGCAGCTACTCC...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTCAAATCCTAAGCAATCCTCTTGCTTCTGTCTCTCAGGTGGTGGGATTACTTGTGCCAATTCCTaGCCAAAGTTCTTAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LASNPKQSSCFCLSGGGITCANS*PKFLSL Trigger: CAAACTTAAGAACTTTGGGCAGGAATTGGCACAAGT...AATCCCACCACCTGAGAGACAGAAGCAAGAGGATTGCTTAGGATTTGAGGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTACCTTCACGTTCCTGCTaGAGCCCTGGGTTTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FTKHIKTSISRPSTYNGLPSRSC*SPGFGT Trigger: AGTCCCAAACCCAGGGCTCCAGCAGGAACGTGAAGG...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATACTCTACTTGCACACTaGCTTGATGACTTGCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KASKDFLGDADADAELADTLLAH*LDDLRF Trigger: AAAACGCAAGTCATCAAGCCAGTGTGCAAGTAGAGT...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTATCTGCTGGGCTTCACTaGGTTCCAGCTTCAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTKHIKTSISRPSTYNGLSAGLH*VPASSA Trigger: AGCGCTTGAAGCTGGAACTCAGTGAAGCCCAGCAGA...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | CTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAAGTGAAGAGTCAGACAGTCTATaGTTGTTTTCCTGGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLTHETAWMDPKGIMLSEESDSL*LFSWSV Trigger: AACGCTCCAGGAAAACAATCATAGACTGTCTGACTC...TTCACTTAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAGCATCAGTCAAAGCTTaGTGCAATCTCAGGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKLLTHETAWMDPKGIMLASVKA*CNLRTS Trigger: AGAGGTCCTGAGATTGCAGCAAGCTTTGACTGATGC...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | CAACACCTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAATGGAAAACTTCATGTTaGTCTCTTGTAACGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QHLQASKHIRNMQVTPGKWKTSC*SLVTPG Trigger: ACCAGGCGTTACAAGAGACCAACATGAAGTTTTCCA...TTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAGGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | CTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAAGTGAATGTCTTCAGCAAGACTaGTATCCTGGTTTAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTHETAWMDPKGIMLSECLQQD*YPGLNS Trigger: GGAGTTTAAACCAGGATATCAGTCTTGCTGAAGACA...TTCACTTAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | TCAACTGTGGAGTTGGCCAAAATGATACACACTAAACTGAAACCACGCCTCGGAAGTCTTTTTCTTGATTaGGTTGAATTAAGCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STVELAKMIHTKLKPRLGSLFLD*VELSAP Trigger: AGGAGCGCTTAATTCAACTCAATCAAGAAAAAGACT...TCCGAGGCGTGGTTTCAGTTTAGTGTGTATCATTTTGGCCAACTCCACAGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTGCTTTTTCCTTAAGGTCTaGGCACATTTGTCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVLCRAQGPLQVINMYCFFLKV*AHLSNS Trigger: GGAATTAGACAAATGTGCTCAGACCTTAAGGAAAAA...GCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCACAGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAATTCAAGCGCTCACACTaGTCAGTCATCTCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKGLEILGSPNTWCWCTEFKRSH*SVISLF Trigger: AAAGAGAGAGATGACTGAGCAGTGTGAGCGCTTGAA...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACGTTTTTCCAGACTTCCTaGTCATGTTCTGCAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KGLEILGSPNTWCWCTETFFQTS*SCSAED Trigger: GTCTTCTGCAGAACATGACCAGGAAGTCTGGAAAAA...CGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGAACTGTGGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGACTGAGAAGACTCATGTaGCTCAGAAGACTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CEELWLPMQNSTTNSKCRLRRLM*LRRLAC Trigger: GCAAGCCAGTCTTCTGAGCCACATGAGTCTTCTCAG...TCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCCACAGTTCTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AGAAAACGGCAGCTGGAGGAGCTTTCTGATGAACAGTTGGATCCTGATCGAGATTTTCTCGTAACATCATaGAAAACTTCATGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRQLEELSDEQLDPDRDFLVTS*KTSCWS Trigger: AGACCAACATGAAGTTTTCCATGATGTTACGAGAAA...ATCTCGATCAGGATCCAACTGTTCATCAGAAAGCTCCTCCAGCTGCCGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCAGCTTTTTCCTCTTGTTaGAAGTGTTCAAGAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAAFSSC*KCSRTI Trigger: GATGGTTCTTGAACACTTCCAACAAGAGGAAAAAGC...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTATCGTCCAGCATCTCTTaGTGGAGCTCATTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLLTHETAWMDPKGIMLSSSIS*WSSFCF Trigger: AAAGCAAAATGAGCTCCACCAAGAGATGCTGGACGA...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAGATTGCTGCTTAATTTaGAGTTCGGATGCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EKGLEILGSPNTWCWCTEDCCLI*SSDASC Trigger: GCATGAAGCATCCGAACTTCAAATTAAGCAGCAATC...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGAAAGACATCCACAGTTATCATCCTCAAGCTaGTGGGTTCTCTGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFQCKIQLQILSAERHPQLSSSS*WVLCFS Trigger: TGAGAAGCAGAGAACCCATCAGCTTGAGGATGATAA...CTGTGGATGTCTTTCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | CAACACCTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAACTTCATTTTCTGTTCTaGGATCAAAAGCAACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHLQASKHIRNMQVTPGKLHFLF*DQKQLA Trigger: AGCAAGTTGCTTTTGATCTCAGAACAGAAAATGAAG...TTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAGGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAAGCTTGCTCTGGTTTTaGTCTTCAATCATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKGLEILGSPNTWCWCTESLLWF*SSIIFW Trigger: CCAGAAGATGATTGAAGATCAAAACCAGAGCAAGCT...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGAACTGTGGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGAGAGCCAGAGGAGAGCTaGGGAGACATAATATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CEELWLPMQNSTTNSKCREPEES*GDIISS Trigger: ACTTGATATTATGTCTCCTCAGCTCTCCTCTGGCTC...TCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCCACAGTTCTTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTATGCCTTCTCTCTCATTaGATGGCATTCAAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLLTHETAWMDPKGIMLCLLSH*MAFKLL Trigger: AAGGAGTTTGAATGCCATTCAATGAGAGAGAAGGCA...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | CAACACCTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAATTCCTGGTCATGTTCTaGAGAAGACAATCTTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: QHLQASKHIRNMQVTPGKFLVMF*RRQSFM Trigger: CATAAAAGATTGTCTTCTGCAGAACATGACCAGGAA...TTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAGGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTATCTTCTGCAAACAGCTaGTCCATCTCTTCCCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NKLLTHETAWMDPKGIMLSSANS*SISSLL Trigger: TAAAAGGGAAGAGATGGAGCAGCTGTTTGCAGAAGA...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATTTCTCTCTCATTGAATaGCATTCAAACTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KASKDFLGDADADAELADFSLIE*HSNSFS Trigger: AGAAAAGGAGTTTGAATGCCATTCAATGAGAGAGAA...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAACATTCTGCAGGGTACTaGTTTCCATTTGCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EKGLEILGSPNTWCWCTEHSAGY*FPFASV Trigger: AACAGAAGCAAATGGAAACCAGTACCCTGCAGAATG...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | AAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACGTCCAGCATCTCTTGGTaGAGCTCATTTTGCTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGLEILGSPNTWCWCTETSSISW*SSFCFL Trigger: TAAAAAGCAAAATGAGCTCCACCAAGAGATGCTGGA...CGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAATCCTGCCTTTCTTCATaGAACTGGGCTTTTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKGLEILGSPNTWCWCTESCLSS*NWAFIC Trigger: ACAAATAAAAGCCCAGTTGCATGAAGAAAGGCAGGA...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTATTTTCTTCACCTGCTaGTTCAGTTTATCCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGLDQCICRMHTTEMLGTIFFTC*FSLSRS Trigger: GGAGCGGGATAAACTGAAGCAGCAGGTGAAGAAAAT...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAAAATTTGTCACTGCCTaGCTCAAAAGCTCGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKGLEILGSPNTWCWCTEKFVTA*LKSSFS Trigger: TGAAAACGAGCTTTTGAGGCAGGCAGTGACAAATTT...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| 3UTR CAA 72 bp | TCAACTTACAATGGCTTAACTGTTTCAACTGTGGAGTaGGCCAAAATGATACACACTAAACTGAAACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: STYNGLTVSTVE*AKMIHTKLKPR Trigger: GCGTGGTTTCAGTTTAGTGTGTATCATTTTGGCCAACTCCACAGTTGAAACAGTTAAGCCATTGTAAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTATCCATCTGTAAGATCTaGATAGTGTTTTGCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKLLTHETAWMDPKGIMLSICKI*IVFCIS Trigger: TGAGATGCAAAACACTATTCAGATCTTACAGATGGA...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | AAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACGTCTTACCTCTTCATATaGTTCAAGCAACTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KGLEILGSPNTWCWCTETSYLFI*FKQLFI Trigger: AATGAAGAGTTGCTTGAAGCATATGAAGAGGTAAGA...CGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGAACTGTGGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGATTAAGACTGAATGAGTaGCTTCATTCTCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CEELWLPMQNSTTNSKCRLRLNE*LHSPLS Trigger: GGAGAGAGGAGAATGAAGCCACTCATTCAGTCTTAA...TCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCCACAGTTCTTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAATTCACAATTCACTGCTCAGTTTaGAAAGTGATATCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQASKHIRNMQVTPGKFTIHCSV*KVISEV Trigger: AACTTCAGATATCACTTTCCAAACTGAGCAGTGAAT...TGTGAATTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTACCTCTTCATTTTGTCTaGTGTGTTCCCTCAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTKHIKTSISRPSTYNGLPLHFV*CVPSVH Trigger: ATGAACTGAGGGAACACATCAGACAAAATGAAGAGG...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GAGAAATTCAAGAGTGCATTGGCTGTAGCTCTATATAGAACACAATGGAACAGTGCTCTAAATGTTCATTaGGCTGTTCTACTTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKFKSALAVALYRTQWNSALNVH*AVLLLK Trigger: TTTCAGAAGTAGAACAGCTCAATGAACATTTAGAGC...ACTGTTCCATTGTGTTCTATATAGAGCTACAGCCAATGCACTCTTGAATTTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR TCA 90 bp | GAGAAATTCAAGAGTGCATTGGCTGTAGCTCTATATAGAACACAATGGAACAGTTCAATCATCTTCTGGTaGTGTTTAATCTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKFKSALAVALYRTQWNSSIIFW*CLISSS Trigger: GGAAGAAGAGATTAAACATCACCAGAAGATGATTGA...ACTGTTCCATTGTGTTCTATATAGAGCTACAGCCAATGCACTCTTGAATTTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTATCATCCAAACGTTCCTaGAGCGATAACACTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTKHIKTSISRPSTYNGLSSKRS*SDNTFP Trigger: AGGAAAAGTGTTATCGCTGCAGGAACGTTTGGATGA...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGAACTGTGGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGAGCAAGACTGATATCCTaGTTTAAACTCCTTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CEELWLPMQNSTTNSKCRARLIS*FKLLSL Trigger: GAGACTAAGGAGTTTAAACCAGGATATCAGTCTTGC...TCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCCACAGTTCTTCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTTCTCATCTCTTTGCTTaGAGACCATGTTCAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLDQCICRMHTTEMLGTSHLFA*RPCSVV Trigger: AACAACTGAACATGGTCTCCAAGCAAAGAGATGAGA...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTATTTTCCAGAGAAATCTaGTTGTTGCCAGCAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTKHIKTSISRPSTYNGLFSREI*LLPATD Trigger: ATCTGTTGCTGGCAACAAGCAGATTTCTCTGGAAAA...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR GCA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTGCTAAGAGGTGGTTTTaGTTTTCTAATTCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGLDQCICRMHTTEMLGTAKRWF*FSNSAE Trigger: TTCTGCTGAATTAGAAAAGCAAAACCACCTCTTAGC...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTATGCCTTGCTTTAAGGTaGTTGATTTCTTCCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTKHIKTSISRPSTYNGLCLALR*LISSSF Trigger: GAAAGAGGAAGAAATCAACCACCTTAAAGCAAGGCA...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTTATCCTTTTCTTCTATaGTCTGCCTTAAAGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGLDQCICRMHTTEMLGTYPFLL*SALKSH Trigger: ATGAGACTTTAAGGCAGACCATAGAAGAAAAGGATA...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS CCA 90 bp | GCTGAGACAGCTCAGACTCCAGCTCGGTGGTGCTGTCAAGGGTTCTaGGCTCAGGCGCGGGCACTACCCGACTCTGCTGCTCCCGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AETAQTPARWCCQGF*AQARALPDSAAPGA Trigger: GGCTCCGGGAGCAGCAGAGTCGGGTAGTGCCCGCGCCTGAGCCCAGAACCCTTGACAGCACCACCGAGCTGGAGTCTGAGCTGTCTCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS TCA 90 bp | GATGCACTGGCTGCTGGTGCGCTGCCAGATCCTAAGTGGGCTGACTaGGCAGCTGACTGCAGTCTGAGCAGTTCATCCTGTAGTGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DALAAGALPDPKWAD*AADCSLSSSSCSAS Trigger: GCTCGCACTACAGGATGAACTGCTCAGACTGCAGTCAGCTGCTCAGTCAGCCCACTTAGGATCTGGCAGCGCACCAGCAGCCAGTGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000176728.2 ENSMUST00000177536.8 |
||
| CDS TCA 90 bp | CCACCGCAGCATCACTCTGCCGCAGAGCACTCTGCTGGGCTTCACTaGGTTCCAGCTTCAAGCGCTCACACTGCTCAGTCATCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPQHHSAAEHSAGLH*VPASSAHTAQSSLS Trigger: AGAGAGAGATGACTGAGCAGTGTGAGCGCTTGAAGCTGGAACTCAGTGAAGCCCAGCAGAGTGCTCTGCGGCAGAGTGATGCTGCGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177536.8 |
||
| CDS GCA 90 bp | GAATTAAGCGCTCCTGTTCCAGCTGTAAGGCGGAGGTATCGGGGCTaGACGCGCTGGACAGTTCCTGGACAGTTTGCTCGTACTTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELSAPVPAVRRRYRG*TRWTVPGQFARTSA Trigger: AGCGGAAGTACGAGCAAACTGTCCAGGAACTGTCCAGCGCGTGCAGCCCCGATACCTCCGCCTTACAGCTGGAACAGGAGCGCTTAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 90 bp | AGCTGTAAGGCGGAGGTATCGGGGCTGCACGCGCTGGACAGTTCCTaGACAGTTTGCTCGTACTTCCGCTCTTCTTCCAACACCCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCKAEVSGLHALDSS*TVCSYFRSSSNTRF Trigger: AAAGCGGGTGTTGGAAGAAGAGCGGAAGTACGAGCAAACTGTCCAGGAACTGTCCAGCGCGTGCAGCCCCGATACCTCCGCCTTACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 90 bp | ACCTGCTGCTTCAGTTTATCCCGCTCCTGTAAGAGCTCCTCAAACTaGTTACTGTTAACCCCTCCAGCCTCACTCCCCGTGCCAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCCFSLSRSCKSSSN*LLLTPPASLPVPEV Trigger: GACTTCTGGCACGGGGAGTGAGGCTGGAGGGGTTAACAGTAACCAGTTTGAGGAGCTCTTACAGGAGCGGGATAAACTGAAGCAGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS TCA 90 bp | CATAGCGTATGCATGCAGCTGCTGCTGAAGGTACACAACATCCTGTaGGTAGGACGCGGAGGAGATCCTGGCATGAAGAGCCTGTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: HSVCMQLLLKVHNIL*VGRGGDPGMKSLYL Trigger: GAGATACAGGCTCTTCATGCCAGGATCTCCTCCGCGTCCTACTCACAGGATGTTGTGTACCTTCAGCAGCAGCTGCATGCATACGCTATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS TCA 90 bp | CCCGTGCCAGAAGTCTGCAAGACTGTCAGCAGGGTCTGGCACTTCTaGCTCAGTGCATCGATCTCAATGTCCTTTTCTCGAATGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PVPEVCKTVSRVWHF*LSASISMSFSRMIR Trigger: CCGGATCATTCGAGAAAAGGACATTGAGATCGATGCACTGAGTCAGAAGTGCCAGACCCTGCTGACAGTCTTGCAGACTTCTGGCACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGAGTAAGCACAGAGCGCTGCACCCCACACAGGGAAAGCTCACACTGAGGGGTGGTCATCACTTGTaGTTTCCACTCCTCCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQSKHRALHPTQGKLTLRGGHHL*FPLLHF Trigger: AAAATGGAGGAGTGGAAACAACAAGTGATGACCACC...CCTCAGTGTGAGCTTTCCCTGTGTGGGGTGCAGCGCTCTGTGCTTACTCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | AACACTTGGTGTTGGTGCACTGAAACGGCCTCCAGAGTAAGCACAGAGCGCTGCACCTTCTTCCTCAGTTaGGCCTCTCTGTCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NTWCWCTETASRVSTERCTFFLS*ASLSSA Trigger: TGCAGAAGACAGAGAGGCCAAACTGAGGAAGAAGGT...GCAGCGCTCTGTGCTTACTCTGGAGGCCGTTTCAGTGCACCAACACCAAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS CCA 90 bp | CTCTGTAGCTCCTGGTTCAGCCGGGATTCTTTGTCCCGTAAGCGCTaGACCTCATTCTGCAGGGTACTGGTTTCCATTTGCTTCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCSSWFSRDSLSRKR*TSFCRVLVSICFCF Trigger: GAAACAGAAGCAAATGGAAACCAGTACCCTGCAGAATGAGGTCCAGCGCTTACGGGACAAAGAATCCCGGCTGAACCAGGAGCTACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 90 bp | ATGAGTGGCTTCATTCTCCTCTCTCCCGGAATTAGGGAAATCTGCTaGCACATCCTCCGTGCCCTCCAACAGCATATCCTTCGTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MSGFILLSPGIREIC*HILRALQQHILREV Trigger: AACTTCACGAAGGATATGCTGTTGGAGGGCACGGAGGATGTGCCAGCAGATTTCCCTAATTCCGGGAGAGAGGAGAATGAAGCCACTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000176728.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGACTCTAAGAGGTGGTCACGCAGTCTCTGTAGCTCCTGGTTCAGCCGGATGGAAAACTTCATGTaGGTCTCTTGTAACGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSDSKRWSRSLCSSWFSRMENFM*VSCNAW Trigger: CCAGGCGTTACAAGAGACCAACATGAAGTTTTCCAT...CCGGCTGAACCAGGAGCTACAGAGACTGCGTGACCACCTCTTAGAGTCAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177480.2 |
||
| CDS-3UTR CAA 90 bp | CGCCAGGACTGCCGACGCTTTCTTAGTCTCATTTCCACTGTTCCTTGCTTATATCATGGACTGACAGCTTaGGAGGCGGGACAGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RQDCRRFLSLISTVPCLYHGLTA*EAGQMD Trigger: ATCCATCTGTCCCGCCTCCAAAGCTGTCAGTCCATG...ATATAAGCAAGGAACAGTGGAAATGAGACTAAGAAAGCGTCGGCAGTCCTGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS TCA 90 bp | AGTAAGTCATCCTTCACGTTCCTGCTGGAGCCCTGGGTTTGGGACTaGGTTAACTCACTCCTGACTGTGGACAGCTCCTCTTCATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKSSFTFLLEPWVWD*VNSLLTVDSSSSFC Trigger: ACAAAATGAAGAGGAGCTGTCCACAGTCAGGAGTGAGTTAACTCAGTCCCAAACCCAGGGCTCCAGCAGGAACGTGAAGGATGACTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS-3UTR CAA 90 bp | TCAACTGTGGAGTTGGCCAAAATGATACACACTAAACTGAAACCACGCCTCGGACCGCTCCAGCTCCTCTaGCAAGTGATTGTTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STVELAKMIHTKLKPRLGPLQLL*QVIVLF Trigger: GAAGAGAACAATCACTTGCAAGAGGAGCTGGAGCGG...TCCGAGGCGTGGTTTCAGTTTAGTGTGTATCATTTTGGCCAACTCCACAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CTAGCCTCAAATCCTAAGCAATCCTCTTGCTTCTGTCTCTCAGGTGGTGGGATTGACGGTGGTCATCACTaGTTGTTTCCACTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LASNPKQSSCFCLSGGGIDGGHH*LFPLLH Trigger: ATGGAGGAGTGGAAACAACAAGTGATGACCACCGTC...AATCCCACCACCTGAGAGACAGAAGCAAGAGGATTGCTTAGGATTTGAGGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS GCA 90 bp | TCCACTTTCCCTTCTGTGCTGTTGACCAAGCTCATCAGTTTCTTCTaGGCGTCGTCCAGCATCTCTTGGTGGAGCTCATTTTGCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: STFPSVLLTKLISFF*ASSSISWWSSFCFL Trigger: TAAAAAGCAAAATGAGCTCCACCAAGAGATGCTGGACGACGCGCAGAAGAAACTGATGAGCTTGGTCAACAGCACAGAAGGGAAAGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCACCTGGAGCGTTCGAATaGTGGCATCTTTCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAPGAFE*WHLSPA Trigger: TGCAGGAGAAAGATGCCACAATTCGAACGCTCCAGG...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS CCA 90 bp | GTTCCTGAGAGACAGAGAGTTGCAGGGCAGTCTCATCTCTTTGCTTaGAGACCATGTTCAGTTGTTCTTGTAAAGACTCTACTTGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: VPERQRVAGQSHLFA*RPCSVVLVKTLLAH Trigger: GTGTGCAAGTAGAGTCTTTACAAGAACAACTGAACATGGTCTCCAAGCAAAGAGATGAGACTGCCCTGCAACTCTCTGTCTCTCAGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCATTCTCATTCAGAAGCTaGATCTCCAGCTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAFSFRS*ISSSLS Trigger: GGAGAGGGAGCTGGAGATCAAGCTTCTGAATGAGAA...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CTAGCCTCAAATCCTAAGCAATCCTCTTGCTTCTGTCTCTCAGGTGGTGGGATTTTTCTCATGAGGACTTaGTCCACTTTCCCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LASNPKQSSCFCLSGGGIFLMRT*STFPSV Trigger: CACAGAAGGGAAAGTGGACAAAGTCCTCATGAGAAA...AATCCCACCACCTGAGAGACAGAAGCAAGAGGATTGCTTAGGATTTGAGGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCACCGAGTAACACCTCCTaGATCTTCTGCAAACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAPSNTS*IFCKQL Trigger: CAGCTGTTTGCAGAAGATCAAGGAGGTGTTACTCGG...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS CCA 90 bp | GGAGCCGCTCCAGCTCCTCTTGCAAGTGATTGTTCTCTTCTTTCATaGATCCAAGACTTCTATCCTTTTCTTCTATGGTCTGCCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAAPAPLASDCSLLS*IQDFYPFLLWSALK Trigger: CTTTAAGGCAGACCATAGAAGAAAAGGATAGAAGTCTTGGATCCATGAAAGAAGAGAACAATCACTTGCAAGAGGAGCTGGAGCGGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACGAGCATCAGTCAAAGCTaGCTGCAATCTCAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGLEILGSPNTWCWCTETSISQS*LQSQDL Trigger: GAGGTCCTGAGATTGCAGCAAGCTTTGACTGATGCT...CGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATGCCTCTTGGTTCTGCTaGTCCAGTTCTTCTAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KASKDFLGDADADAELADASWFC*SSSSNS Trigger: TGAATTAGAAGAACTGGACAAGCAGAACCAAGAGGC...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTGCTCTGTAGAGCGCAAGGTCCTCTACAGGTGATCAATATGTATTGCATTCTGCTCATAACTTaGGATCAGGCCTGTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSVLCRAQGPLQVINMYCILLIT*DQACVV Trigger: GACTACACAGGCCTGATCCAAAGTTATGAGCAGAAT...GCAATACATATTGATCACCTGTAGAGGACCTTGCGCTCTACAGAGCACAGAGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | AAAGCATCTAAAGACTTTCTGGGTGATGCTGATGCTGATGCTGAGCTGGCTGATCCTAAAAGAAGGTCCTaGGTATTACAAAGCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KASKDFLGDADADAELADPKRRS*VLQSCP Trigger: AGGGCAGCTTTGTAATACCAAGGACCTTCTTTTAGG...ATCAGCCAGCTCAGCATCAGCATCAGCATCACCCAGAAAGTCTTTAGATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | AAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACGGTCGTCCAGCATCTCTaGGTGGAGCTCATTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KGLEILGSPNTWCWCTETVVQHL*VELILL Trigger: AAGCAAAATGAGCTCCACCAAGAGATGCTGGACGAC...CGTTTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS TCA 90 bp | TTAAACTCCTTAGTCTCATTATTTCATTTTCAGCATCGTAACTCCTaGGCCACTCCTCTCGATGCCGCCGACTTATCTCTGTCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LNSLVSLFHFQHRNS*ATPLDAADLSLSAS Trigger: AGAAGCTGACAGAGATAAGTCGGCGGCATCGAGAGGAGTGGCTCAGGAGTTACGATGCTGAAAATGAAATAATGAGACTAAGGAGTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176728.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTTCATCTTCACCTGTGCCTCCCTCCCGTAGCTGACTTGATCTTCTTGATCATCTACTTCTTGTaGAAGCAACTGAGAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NGFHLHLCLPPVADLIFLIIYFL*KQLRRL Trigger: GAGTCTTCTCAGTTGCTTCAACAAGAAGTAGATGAT...CAAGAAGATCAAGTCAGCTACGGGAGGGAGGCACAGGTGAAGATGAAAACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAACAACACCTGCACTGTaGTCAGGTGACACTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NKLLTHETAWMDPKGIMLTTPAL*SGDTGK Trigger: TTTGCCAGTGTCACCTGACAACAGTGCAGGTGTTGT...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS GCA 90 bp | AAGGTCCTTGGTATTACAAAGCTGCCCTATGCTATGCTGAACTTGTaGCAATTCCTGCCCAAAGTTCTTAAGTTTGGTTTCATTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVLGITKLPYAMLNL*QFLPKVLKFGFILL Trigger: GAGCAGAATGAAACCAAACTTAAGAACTTTGGGCAGGAATTGGCACAAGTTCAGCATAGCATAGGGCAGCTTTGTAATACCAAGGACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS-3UTR CAA 90 bp | AACAAACTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAATGCTTAGTAGCCTCTaGGTTCTGCTTGTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKLLTHETAWMDPKGIMLMLSSL*VLLVQF Trigger: GAACTGGACAAGCAGAACCAAGAGGCTACTAAGCAT...TAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAGTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CGCCAGGACTGCCGACGCTTTCTTAGTCTCATTTCCACTGTTCCTTGCTTATATTGCTCTAAATGTTCATaGAGCTGTTCTACTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RQDCRRFLSLISTVPCLYCSKCS*SCSTSE Trigger: TTCAGAAGTAGAACAGCTCAATGAACATTTAGAGCA...ATATAAGCAAGGAACAGTGGAAATGAGACTAAGAAAGCGTCGGCAGTCCTGGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTCAACAGCACACATGCCGGTGATTACATTCAATCAACACCAACAGCACAGCTTGCTCTGGTTTaGATCTTCAATCATCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKLNSTHAGDYIQSTPTAQLALV*IFNHLL Trigger: CAGAAGATGATTGAAGATCAAAACCAGAGCAAGCTG...TGCTGTTGGTGTTGATTGAATGTAATCACCGGCATGTGTGCTGTTGAGTTTACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CGCCAGGACTGCCGACGCTTTCTTAGTCTCATTTCCACTGTTCCTTGCTTATATTTTCTTATTCTCATCTaGCAACTTAATAAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RQDCRRFLSLISTVPCLYFLILI*QLNKGC Trigger: GCAGCCCTTATTAAGTTGCAAGATGAGAATAAGAAA...ATATAAGCAAGGAACAGTGGAAATGAGACTAAGAAAGCGTCGGCAGTCCTGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAAACTGTCAACCGAAACTaGTGCCTGAAGTTGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EKGLEILGSPNTWCWCTETVNRN*CLKLVK Trigger: CTTCACCAACTTCAGGCACAAGTTTCGGTTGACAGT...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAATTTAGCTCCCCAGCCTaGCCCTGTTCTTTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EKGLEILGSPNTWCWCTEFSSPA*PCSFSF Trigger: GAAAGAAAAAGAACAGGGCAAGGCTGGGGAGCTAAA...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAATTCACAGTCTCATCTCTTTGCTaGGAGACCATGTTCAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LQASKHIRNMQVTPGKFTVSSLC*ETMFSC Trigger: ACAACTGAACATGGTCTCCAAGCAAAGAGATGAGAC...TGTGAATTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS TCA 90 bp | CCTAAAAGAAGGTCCTTGGTATTACAAAGCTGCCCTATGCTATGCTaGACTTGTGCCAATTCCTGCCCAAAGTTCTTAAGTTTGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PKRRSLVLQSCPMLC*TCANSCPKFLSLVS Trigger: TGAAACCAAACTTAAGAACTTTGGGCAGGAATTGGCACAAGTTCAGCATAGCATAGGGCAGCTTTGTAATACCAAGGACCTTCTTTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS-3UTR CAA 90 bp | CAACACCTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAAAGATTGCTGCTTAATTaGAAGTTCGGATGCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QHLQASKHIRNMQVTPGKRLLLN*KFGCFM Trigger: CATGAAGCATCCGAACTTCAAATTAAGCAGCAATCT...TTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAGGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CTACTGACCCATGAAACAGCTTGGATGGATCCCAAGGGAATTATGTTAAGTGAAATCGGAATTCTCTGTTaGACTATCCTGCCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLTHETAWMDPKGIMLSEIGILC*TILPFF Trigger: GAAGAAAGGCAGGATAGTCAAACAGAGAATTCCGAT...TTCACTTAACATAATTCCCTTGGGATCCATCCAAGCTGTTTCATGGGTCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAATACTTGCACACTGGCTaGATGACTTGCGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EKGLEILGSPNTWCWCTEYLHTG*MTCVFH Trigger: ATGGAAAACGCAAGTCATCAAGCCAGTGTGCAAGTA...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGAAAGACATCCACAGAGAGAAATCTGCTTGTaGCCAGCAACAGATTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GFQCKIQLQILSAERHPQREICL*PATDSS Trigger: GGAAGAATCTGTTGCTGGCAACAAGCAGATTTCTCT...CTGTGGATGTCTTTCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | CAACACCTCCAGGCTTCCAAACACATTAGAAATATGCAGGTTACCCCAGGTAAAACTTGCAGTTTAGAATaGTTATCACTGTCAACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QHLQASKHIRNMQVTPGKTCSLE*LSLSTE Trigger: TTCGGTTGACAGTGATAACAATTCTAAACTGCAAGT...TTTACCTGGGGTAACCTGCATATTTCTAATGTGTTTGGAAGCCTGGAGGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGGTTTAGAAATACTTGGAAGTCCCAACACTTGGTGTTGGTGCACTGAATCGGTAACTGGAAGATaGCTGCTTAATTTGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EKGLEILGSPNTWCWCTESVTGR*LLNLKF Trigger: GAACTTCAAATTAAGCAGCAATCTTCCAGTTACCGA...TTCAGTGCACCAACACCAAGTGTTGGGACTTCCAAGTATTTCTAAACCTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS CCA 90 bp | TCTCTCTCATTGAATGGCATTCAAACTCCTTTTCTCGTAACATCATaGAAAACTTCATGTTGGTCTCTTGTAACGCCTGGTATTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLNGIQTPFLVTS*KTSCWSLVTPGILF Trigger: AAACAGAATACCAGGCGTTACAAGAGACCAACATGAAGTTTTCCATGATGTTACGAGAAAAGGAGTTTGAATGCCATTCAATGAGAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177480.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTTTTGCAGATTTCAGTTaGATCAGAGCTTTGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGLDQCICRMHTTEMLGTFADFS*IRALCS Trigger: GGAGCACAAAGCTCTGATCAAACTGAAATCTGCAAA...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTGCCTGTGTAGTCCACTaGCAGTTTAGAATTGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: SGLDQCICRMHTTEMLGTACVVH*QFRIVI Trigger: GATAACAATTCTAAACTGCAAGTGGACTACACAGGC...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCAATGCAAAATTCAACTACAAATTCTAAGTGCAGAAAGACATCCACAGCAGATCATCTACTTCTaGTTGAAGCAACTGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFQCKIQLQILSAERHPQQIIYF*LKQLRR Trigger: TCTTCTCAGTTGCTTCAACAAGAAGTAGATGATCTG...CTGTGGATGTCTTTCTGCACTTAGAATTTGTAGTTGAATTTTGCATTGGAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | TTTACGAAACACATAAAAACCTCTATCAGTAGACCCTCAACTTACAATGGCTTAATGGAAAACTTCATGTaGGTCTCTTGTAACGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FTKHIKTSISRPSTYNGLMENFM*VSCNAW Trigger: CCAGGCGTTACAAGAGACCAACATGAAGTTTTCCAT...TAAGCCATTGTAAGTTGAGGGTCTACTGATAGAGGTTTTTATGTGTTTCGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | GAGAAATTCAAGAGTGCATTGGCTGTAGCTCTATATAGAACACAATGGAACAGTAGTTTGGACACACATTaGAAGTTTCTGATTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EKFKSALAVALYRTQWNSSLDTH*KFLIVF Trigger: GAAGACAATCAGAAACTTCAAATGTGTGTCCAAACT...ACTGTTCCATTGTGTTCTATATAGAGCTACAGCCAATGCACTCTTGAATTTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTTAGATCAATGCATATGTAGAATGCACACAACAGAGATGTTAGGTACTAGGTCTTCGATTTGTTaGGTAGATTCTACTTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGLDQCICRMHTTEMLGTRSSIC*VDSTFS Trigger: GGAAAAAGTAGAATCTACCAAACAAATCGAAGACCT...AGTACCTAACATCTCTGTTGTGTGCATTCTACATATGCATTGATCTAAACCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021605.14 |
||
| CDS TCA 90 bp | TTAATAAGGGCTGCTTCTTTGGCACTAATAATATCGATCACCTTATaGTATTCTGTTTTTAGCTGGCTATTTTCCCTTGTCTTCTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LIRAASLALIISITL*YSVFSWLFSLVFSF Trigger: GAATGAGAAGACAAGGGAAAATAGCCAGCTAAAAACAGAATATCATAAGGTGATCGATATTATTAGTGCCAAAGAAGCAGCCCTTATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | GCTCAGACTCCAGCTCGGTGGTGCTGTCAAGGGTTCTaGGCTCAGGCGCGGGCACTACCCGACTCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AQTPARWCCQGF*AQARALPDSAA Trigger: AGCAGCAGAGTCGGGTAGTGCCCGCGCCTGAGCCCAGAACCCTTGACAGCACCACCGAGCTGGAGTCTGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | TGTGCAGCTGAGACAGCTCAGACTCCAGCTCGGTGGTaGTGTCAAGGGTTCTGGGCTCAGGCGCGGGCACTA | + |
|
Preference number: 6 (lower is better) Translates to: CAAETAQTPARW*CQGFWAQARAL Trigger: TAGTGCCCGCGCCTGAGCCCAGAACCCTTGACAGCACCACCGAGCTGGAGTCTGAGCTGTCTCAGCTGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | TTCTGTGCAGCTGAGACAGCTCAGACTCCAGCTCGGTaGTGCTGTCAAGGGTTCTGGGCTCAGGCGCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FCAAETAQTPAR*CCQGFWAQARA Trigger: TGCCCGCGCCTGAGCCCAGAACCCTTGACAGCACCACCGAGCTGGAGTCTGAGCTGTCTCAGCTGCACAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | GCTCCTGTTCCAGCTGTAAGGCGGAGGTATCGGGGCTaGACGCGCTGGACAGTTCCTGGACAGTTTGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: APVPAVRRRYRG*TRWTVPGQFAR Trigger: ACGAGCAAACTGTCCAGGAACTGTCCAGCGCGTGCAGCCCCGATACCTCCGCCTTACAGCTGGAACAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | TCCTCCACCGCAGCATCACTCTGCCGCAGAGCACTCTaGTGGGCTTCACTGAGTTCCAGCTTCAAGCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSTAASLCRRAL*WASLSSSFKRS Trigger: TGAGCGCTTGAAGCTGGAACTCAGTGAAGCCCAGCAGAGTGCTCTGCGGCAGAGTGATGCTGCGGTGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177536.8 |
||
| CDS TCA 72 bp | GCTGCTGGTGCGCTGCCAGATCCTAAGTGGGCTGACTaGGCAGCTGACTGCAGTCTGAGCAGTTCATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AAGALPDPKWAD*AADCSLSSSSC Trigger: ACAGGATGAACTGCTCAGACTGCAGTCAGCTGCTCAGTCAGCCCACTTAGGATCTGGCAGCGCACCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000176728.2 ENSMUST00000177536.8 |
||
| CDS TCA 72 bp | AGTCAAAGCTTGCTGCAATCTCAGGACCTCTGCGACTaGGGAGCTGTGTGGGAGGATCGTCTCCTCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SQSLLQSQDLCD*GAVWEDRLLLH Trigger: GTGGAGGAGGAGACGATCCTCCCACACAGCTCCTCAGTCGCAGAGGTCCTGAGATTGCAGCAAGCTTTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177536.8 |
||
| CDS TCA 72 bp | TCCTTCACGTTCCTGCTGGAGCCCTGGGTTTGGGACTaGGTTAACTCACTCCTGACTGTGGACAGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFTFLLEPWVWD*VNSLLTVDSSS Trigger: AGAGGAGCTGTCCACAGTCAGGAGTGAGTTAACTCAGTCCCAAACCCAGGGCTCCAGCAGGAACGTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS TCA 72 bp | TGCATGCAGCTGCTGCTGAAGGTACACAACATCCTGTaGGTAGGACGCGGAGGAGATCCTGGCATGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CMQLLLKVHNIL*VGRGGDPGMKS Trigger: GCTCTTCATGCCAGGATCTCCTCCGCGTCCTACTCACAGGATGTTGTGTACCTTCAGCAGCAGCTGCATGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | TCTTCCTGGAGCTGGGCAGACTCGTGCTGCATGTTCTaGACGGTGGTCATCACTTGTTGTTTCCACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSWSWADSCCMF*TVVITCCFHSS Trigger: GGAGGAGTGGAAACAACAAGTGATGACCACCGTCCAGAACATGCAGCACGAGTCTGCCCAGCTCCAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | TGGGCTTCACTGAGTTCCAGCTTCAAGCGCTCACACTaGTCAGTCATCTCTCTCTTTTCCACTTCCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: WASLSSSFKRSH*SVISLFSTSSR Trigger: GCGGCTGGAAGTGGAAAAGAGAGAGATGACTGAGCAGTGTGAGCGCTTGAAGCTGGAACTCAGTGAAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177536.8 |
||
| CDS CAA 72 bp | TCCCAGCCATCCAGCCATCCACCGAGTAACACCTCCTaGATCTTCTGCAAACAGCTGCTCCATCTCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQPSSHPPSNTS*IFCKQLLHLFP Trigger: AGGGAAGAGATGGAGCAGCTGTTTGCAGAAGATCAAGGAGGTGTTACTCGGTGGATGGCTGGATGGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | TTCAGTTTATCCCGCTCCTGTAAGAGCTCCTCAAACTaGTTACTGTTAACCCCTCCAGCCTCACTCCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSLSRSCKSSSN*LLLTPPASLPV Trigger: CACGGGGAGTGAGGCTGGAGGGGTTAACAGTAACCAGTTTGAGGAGCTCTTACAGGAGCGGGATAAACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | GGCTTCATTCTCCTCTCTCCCGGAATTAGGGAAATCTaGCACATCCTCCGTGCCCTCCAACAGCATATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GFILLSPGIREI*HILRALQQHIL Trigger: AAGGATATGCTGTTGGAGGGCACGGAGGATGTGCCAGATTTCCCTAATTCCGGGAGAGAGGAGAATGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177536.8 |
||
| CDS GCA 72 bp | CCTTCTGTGCTGTTGACCAAGCTCATCAGTTTCTTCTaGGCGTCGTCCAGCATCTCTTGGTGGAGCTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: PSVLLTKLISFF*ASSSISWWSSF Trigger: AAATGAGCTCCACCAAGAGATGCTGGACGACGCGCAGAAGAAACTGATGAGCTTGGTCAACAGCACAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | TTCATTCTCCTCTCTCCCGGAATTAGGGAAATCTGCTaGCACATCCTCCGTGCCCTCCAACAGCATATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FILLSPGIREIC*HILRALQQHIL Trigger: AAGGATATGCTGTTGGAGGGCACGGAGGATGTGCCAGCAGATTTCCCTAATTCCGGGAGAGAGGAGAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000176728.2 |
||
| CDS TCA 72 bp | ATCTGCGTGAGCTTGCCGACCTCGTCTTTGGACAGCTaGTCGATCTGTTTAGTTAGCGAGGTGTTCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ICVSLPTSSLDS*SICLVSEVFFS Trigger: TGAGAAGAACACCTCGCTAACTAAACAGATCGATCAGCTGTCCAAAGACGAGGTCGGCAAGCTCACGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | CAAGACTGTCAGCAGGGTCTGGCACTTCTGACTCAGTaGATCGATCTCAATGTCCTTTTCTCGAATGATCCG | + |
|
Preference number: 6 (lower is better) Translates to: QDCQQGLALLTQ*IDLNVLFSNDP Trigger: CGGATCATTCGAGAAAAGGACATTGAGATCGATGCACTGAGTCAGAAGTGCCAGACCCTGCTGACAGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CAA 72 bp | ATTGTTATCACTGTCAACCGAAACTTGTGCCTGAAGTaGGTGAAGCTCTTCCTGGAGCTGGGCAGACTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: IVITVNRNLCLK*VKLFLELGRLV Trigger: CACGAGTCTGCCCAGCTCCAGGAAGAGCTTCACCAACTTCAGGCACAAGTTTCGGTTGACAGTGATAACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS TCA 72 bp | TTAGTCTCATTATTTCATTTTCAGCATCGTAACTCCTaGGCCACTCCTCTCGATGCCGCCGACTTATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVSLFHFQHRNS*ATPLDAADLSL Trigger: CAGAGATAAGTCGGCGGCATCGAGAGGAGTGGCTCAGGAGTTACGATGCTGAAAATGAAATAATGAGACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176728.2 |
||
| CDS GCA 72 bp | TCTTCTGCTCCTGTAGAGACTGGAGTAGCTGCAGCTTaGTCTGGTTTTGATCTTCAATCATCTTCTGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSAPVETGVAAA*SGFDLQSSSGD Trigger: ATCACCAGAAGATGATTGAAGATCAAAACCAGAGCAAGCTGCAGCTACTCCAGTCTCTACAGGAGCAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS TCA 72 bp | AGGTCCTTGGTATTACAAAGCTGCCCTATGCTATGCTaGACTTGTGCCAATTCCTGCCCAAAGTTCTTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSLVLQSCPMLC*TCANSCPKFLS Trigger: ACTTAAGAACTTTGGGCAGGAATTGGCACAAGTTCAGCATAGCATAGGGCAGCTTTGTAATACCAAGGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | CTAAAAGAAGGTCCTTGGTATTACAAAGCTGCCCTATaGTATGCTGAACTTGTGCCAATTCCTGCCCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LKEGPWYYKAAL*YAELVPIPAQS Trigger: ACTTTGGGCAGGAATTGGCACAAGTTCAGCATAGCATAGGGCAGCTTTGTAATACCAAGGACCTTCTTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | ATCATGGAAAACTTCATGTTGGTCTCTTGTAACGCCTaGTATTCTGTTTCCTTCCCCTTGGATGCGTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: IMENFMLVSCNA*YSVSFPLDAST Trigger: AGTAGACGCATCCAAGGGGAAGGAAACAGAATACCAGGCGTTACAAGAGACCAACATGAAGTTTTCCATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177480.2 |
||
| CDS CAA 72 bp | GCTCATCAGTTTCTTCTGCGCGTCGTCCAGCATCTCTaGGTGGAGCTCATTTTGCTTTTTAAGTTCTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: AHQFLLRVVQHL*VELILLFKFFN Trigger: ATTGAAGAACTTAAAAAGCAAAATGAGCTCCACCAAGAGATGCTGGACGACGCGCAGAAGAAACTGATGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | GGTATTACAAAGCTGCCCTATGCTATGCTGAACTTGTaGCAATTCCTGCCCAAAGTTCTTAAGTTTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GITKLPYAMLNL*QFLPKVLKFGF Trigger: GAAACCAAACTTAAGAACTTTGGGCAGGAATTGGCACAAGTTCAGCATAGCATAGGGCAGCTTTGTAATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | ATCAGTTTCTTCTGCGCGTCGTCCAGCATCTCTTGGTaGAGCTCATTTTGCTTTTTAAGTTCTTCAATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISFFCASSSISW*SSFCFLSSSIC Trigger: GCAAATTGAAGAACTTAAAAAGCAAAATGAGCTCCACCAAGAGATGCTGGACGACGCGCAGAAGAAACTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CAA 90 bp | AAGAAGGTCCTTGGTATTACAAAGCTGCCCTATGCTATGCTGAACTaGTGCCAATTCCTGCCCAAAGTTCTTAAGTTTGGTTTCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KKVLGITKLPYAMLN*CQFLPKVLKFGFIL Trigger: CAGAATGAAACCAAACTTAAGAACTTTGGGCAGGAATTGGCACAAGTTCAGCATAGCATAGGGCAGCTTTGTAATACCAAGGACCTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | ACTCCTTTTCTCGTAACATCATGGAAAACTTCATGTTaGTCTCTTGTAACGCCTGGTATTCTGTTTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TPFLVTSWKTSC*SLVTPGILFPS Trigger: GGAAGGAAACAGAATACCAGGCGTTACAAGAGACCAACATGAAGTTTTCCATGATGTTACGAGAAAAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177480.2 |
||
| CDS CAA 90 bp | TTCCTGCCCAAAGTTCTTAAGTTTGGTTTCATTCTGCTCATAACTTaGGATCAGGCCTGTGTAGTCCACTTGCAGTTTAGAATTGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: FLPKVLKFGFILLIT*DQACVVHLQFRIVI Trigger: GATAACAATTCTAAACTGCAAGTGGACTACACAGGCCTGATCCAAAGTTATGAGCAGAATGAAACCAAACTTAAGAACTTTGGGCAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | TTGAATGGCATTCAAACTCCTTTTCTCGTAACATCATaGAAAACTTCATGTTGGTCTCTTGTAACGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LNGIQTPFLVTS*KTSCWSLVTPG Trigger: ACCAGGCGTTACAAGAGACCAACATGAAGTTTTCCATGATGTTACGAGAAAAGGAGTTTGAATGCCATTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177480.2 |
||
| CDS CAA 72 bp | AACTCCTTTTCTCGTAACATCATGGAAAACTTCATGTaGGTCTCTTGTAACGCCTGGTATTCTGTTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NSFSRNIMENFM*VSCNAWYSVSF Trigger: GAAGGAAACAGAATACCAGGCGTTACAAGAGACCAACATGAAGTTTTCCATGATGTTACGAGAAAAGGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177480.2 |
||
| CDS CAA 72 bp | ATCAAAATCACATGCTTAGTAGCCTCTTGGTTCTGCTaGTCCAGTTCTTCTAATTCAGCCATAAGGATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: IKITCLVASWFC*SSSSNSAIRIS Trigger: TGAAATCCTTATGGCTGAATTAGAAGAACTGGACAAGCAGAACCAAGAGGCTACTAAGCATGTGATTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 ENSMUST00000177536.8 |
||
| CDS TCA 72 bp | GCTGCTTCTTTGGCACTAATAATATCGATCACCTTATaGTATTCTGTTTTTAGCTGGCTATTTTCCCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AASLALIISITL*YSVFSWLFSLV Trigger: GACAAGGGAAAATAGCCAGCTAAAAACAGAATATCATAAGGTGATCGATATTATTAGTGCCAAAGAAGCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS TCA 72 bp | ACTTCATATTCACTGCTCAGTTTGGAAAGTGATATCTaGAGTTCTTCCTGGTTTAAACTCCTTAGTCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: TSYSLLSLESDI*SSSWFKLLSLI Trigger: AATGAGACTAAGGAGTTTAAACCAGGAAGAACTTCAGATATCACTTTCCAAACTGAGCAGTGAATATGAAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | AACAGATTCTTCCAACTGATTTCTTACCTCTTCATATaGTTCAAGCAACTCTTCATTTTCTGTTCTGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: NRFFQLISYLFI*FKQLFIFCSEI Trigger: GATCTCAGAACAGAAAATGAAGAGTTGCTTGAAGCATATGAAGAGGTAAGAAATCAGTTGGAAGAATCTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CCA 72 bp | CTACTAAATCTTCTACTTTATCTTCAAGCTTCTGTTTaGTTAACTGTAAATCACTTAGGGCCTGTTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLNLLLYLQASV*LTVNHLGPVHC Trigger: ACAGTGAACAGGCCCTAAGTGATTTACAGTTAACCAAACAGAAGCTTGAAGATAAAGTAGAAGATTTAGTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CAA 72 bp | TCTACTAAATCTTCTACTTTATCTTCAAGCTTCTGTTaGGTTAACTGTAAATCACTTAGGGCCTGTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: STKSSTLSSSFC*VNCKSLRACSL Trigger: CAGTGAACAGGCCCTAAGTGATTTACAGTTAACCAAACAGAAGCTTGAAGATAAAGTAGAAGATTTAGTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CAA 72 bp | AACTTTTGTTTCTTGAAAAATATCGGAATTCTCTGTTaGACTATCCTGCCTTTCTTCATGCAACTGGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NFCFLKNIGILC*TILPFFMQLGF Trigger: AAAGCCCAGTTGCATGAAGAAAGGCAGGATAGTCAAACAGAGAATTCCGATATTTTTCAAGAAACAAAAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS GCA 72 bp | AACTCTTCATTTTCTGTTCTGAGATCAAAAGCAACTTaGTCTAAATGTTCATTGAGCTGTTCTACTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NSSFSVLRSKAT*SKCSLSCSTSE Trigger: TTCAGAAGTAGAACAGCTCAATGAACATTTAGAGCAAGTTGCTTTTGATCTCAGAACAGAAAATGAAGAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||
| CDS CAA 72 bp | GTTCTGAGATCAAAAGCAACTTGCTCTAAATGTTCATaGAGCTGTTCTACTTCTGAAAGATTTTGCTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: VLRSKATCSKCS*SCSTSERFCFK Trigger: CTTAAAGCAAAATCTTTCAGAAGTAGAACAGCTCAATGAACATTTAGAGCAAGTTGCTTTTGATCTCAGAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021605.14 ENSMUST00000177183.8 |
||