Pregenerated sensors for TRIP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019487Ensembl transcript IDs: ENSMUST00000019631.11, ENSMUST00000224152.2, ENSMUST00000224885.2, ENSMUST00000224947.2, ENSMUST00000225664.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTGGGAAGCCACAAGTGGGTCCCCGTAGGGTGACAGGTGACAGGTaGGTGAGGGACAGCAGGTTACACAGGTCTCAGCCAAAAGCCACG | + |
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Preference number: 1 (lower is better) Translates to: RGKPQVGPRRVTGDR*VRDSRLHRSQPKAT Trigger: CGTGGCTTTTGGCTGAGACCTGTGTAACCTGCTGTCCCTCACTCACCTGTCACCTGTCACCCTACGGGGACCCACTTGTGGCTTCCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| 3UTR CCA 90 bp | TCCAGACACACTCGGATACCGAGGCTCTCAGCCACCAGCTCTCTCTaGCCTGCGAAGTCATTGACCTCCTGGAGAAGCTGGACAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: SRHTRIPRLSATSSL*PAKSLTSWRSWTND Trigger: GTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCCAGAGAGAGCTGGTGGCTGAGAGCCTCGGTATCCGAGTGTGTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR CCA 90 bp | ACCAGCTCTCTCTGGCCTGCGAAGTCATTGACCTCCTGGAGAAGCTaGACAAATGACTGCTGCTGGCTGAACTTGACTTCAGGGTCATCT | + |
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Preference number: 1 (lower is better) Translates to: TSSLWPAKSLTSWRS*TNDCCWLNLTSGSS Trigger: AGATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCCAGAGAGAGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR TCA 90 bp | TCTCTGGCCTGCGAAGTCATTGACCTCCTGGAGAAGCTGGACAAATaGCTGCTGCTGGCTGAACTTGACTTCAGGGTCATCTTTGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: SLACEVIDLLEKLDK*LLLAELDFRVIFGR Trigger: CCTACCAAAGATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCCAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR GCA 90 bp | TGGCCTGCGAAGTCATTGACCTCCTGGAGAAGCTGGACAAATGACTaGTGCTGGCTGAACTTGACTTCAGGGTCATCTTTGGTAGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: WPAKSLTSWRSWTND*CWLNLTSGSSLVGL Trigger: GAGACCTACCAAAGATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR GCA 90 bp | CCTGCGAAGTCATTGACCTCCTGGAGAAGCTGGACAAATGACTGCTaGTGGCTGAACTTGACTTCAGGGTCATCTTTGGTAGGTCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: PAKSLTSWRSWTNDC*WLNLTSGSSLVGLL Trigger: CAAGAGACCTACCAAAGATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTTCGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR CCA 90 bp | ACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCCCGACACTaGCGGTGCAGACTCCAAGAACTTTATATAATTATATATACTTTT | + |
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Preference number: 1 (lower is better) Translates to: TTSPQRCLLKVHSRH*RCRLQELYIIIYTF Trigger: AAAAGTATATATAATTATATAAAGTTCTTGGAGTCTGCACCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR-3UTR TCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACCCAGAAGCAGCAGCTaGCAGCCCTGCCCCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: AAGRKILNDKYVQPRGKPPRSSS*QPCPSS Trigger: GGACGAGGGGCAGGGCTGTCAGCTGCTGCTTCTGGG...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCCAGAAGCAGCAGCTaGCAGCCCTGCCCCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: QAAGRKILNDKYVQPRGKPRSSS*QPCPSS Trigger: GGACGAGGGGCAGGGCTGTCAGCTGCTGCTTCTGGG...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCAAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCAGGTGACAGGTGAGTaGGGGACAGCAGGTTACACA | + |
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Preference number: 2 (lower is better) Translates to: HPKPDSQTTSPQRCLLKVQVTGE*GTAGYT Trigger: TGTGTAACCTGCTGTCCCTCACTCACCTGTCACCTG...GACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR-3UTR GCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCATGGGCAGGAATAAAGTaGAAGGTCCTGGGGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: AAGRKILNDKYVQPRGKPWAGIK*KVLGAP Trigger: GGGGGCCCCCAGGACCTTGCACTTTATTCCTGCCCA...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| 3UTR CAA 90 bp | TGGACAAATGACTGCTGCTGGCTGAACTTGACTTCAGGGTCATCTTaGGTAGGTCTCTTGGGAAGATACTTTTTCACCAGGCTCCGGAGT | + |
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Preference number: 2 (lower is better) Translates to: WTNDCCWLNLTSGSS*VGLLGRYFFTRLRS Trigger: ACTCCGGAGCCTGGTGAAAAAGTATCTTCCCAAGAGACCTACCAAAGATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCAGGTGACAGGTGAGTaGGGGACAGCAGGTTACACA | + |
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Preference number: 2 (lower is better) Translates to: QAAGRKILNDKYVQPRGKQVTGE*GTAGYT Trigger: TGTGTAACCTGCTGTCCCTCACTCACCTGTCACCTG...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGGTGACAGGTGACAGGTaGGTGAGGGACAGCAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: QAAGRKILNDKYVQPRGKVTGDR*VRDSRL Trigger: TAACCTGCTGTCCCTCACTCACCTGTCACCTGTCAC...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGTGGGCAGGAATAAAGTaGAAGGTCCTGGGGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: RKLLSHFNLGRIHAGMSAWAGIK*KVLGAP Trigger: GGGGGCCCCCAGGACCTTGCACTTTATTCCTGCCCA...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGCAACTCCTGGTCCTCTaGAAGAGCATCCAAAACCCG | + |
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Preference number: 2 (lower is better) Translates to: RKLLSHFNLGRIHAGMSAQLLVL*KSIQNP Trigger: CGGGTTTTGGATGCTCTTGCAGAGGACCAGGAGTTG...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGTTGAAAACCAACTCCTaGTCCTCTGCAAGAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: RKLLSHFNLGRIHAGMSALKTNS*SSARAS Trigger: GGATGCTCTTGCAGAGGACCAGGAGTTGGTTTTCAA...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR GCA 72 bp | CCAAAACCCGACTCCCAAACCACCTCTCCACAGAGATaGCTTTTGAAGGTCCATTCCCGACACTGGCGGTGC | + |
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Preference number: 3 (lower is better) Translates to: PKPDSQTTSPQR*LLKVHSRHWRC Trigger: GCACCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR CCA 72 bp | CTCTGGCCTGCGAAGTCATTGACCTCCTGGAGAAGCTaGACAAATGACTGCTGCTGGCTGAACTTGACTTCA | + |
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Preference number: 3 (lower is better) Translates to: LWPAKSLTSWRS*TNDCCWLNLTS Trigger: TGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR TCA 72 bp | TGCGAAGTCATTGACCTCCTGGAGAAGCTGGACAAATaGCTGCTGCTGGCTGAACTTGACTTCAGGGTCATC | + |
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Preference number: 3 (lower is better) Translates to: CEVIDLLEKLDK*LLLAELDFRVI Trigger: GATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTTCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR CCA 72 bp | TTGACCTCCTGGAGAAGCTGGACAAATGACTGCTGCTaGCTGAACTTGACTTCAGGGTCATCTTTGGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: LTSWRSWTNDCC*LNLTSGSSLVG Trigger: ACCTACCAAAGATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR GCA 72 bp | TCATTGACCTCCTGGAGAAGCTGGACAAATGACTGCTaGTGGCTGAACTTGACTTCAGGGTCATCTTTGGTA | + |
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Preference number: 3 (lower is better) Translates to: SLTSWRSWTNDC*WLNLTSGSSLV Trigger: TACCAAAGATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR GCA 72 bp | AAGTCATTGACCTCCTGGAGAAGCTGGACAAATGACTaGTGCTGGCTGAACTTGACTTCAGGGTCATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: KSLTSWRSWTND*CWLNLTSGSSL Trigger: CAAAGATGACCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| 3UTR CCA 72 bp | CCACAGAGATGCCTTTTGAAGGTCCATTCCCGACACTaGCGGTGCAGACTCCAAGAACTTTATATAATTATA | + |
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Preference number: 3 (lower is better) Translates to: PQRCLLKVHSRH*RCRLQELYIII Trigger: TATAATTATATAAAGTTCTTGGAGTCTGCACCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCTCTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR GCA 72 bp | AGATGCCTTTTGAAGGTCCATTCCCGACACTGGCGGTaGAGACTCCAAGAACTTTATATAATTATATATACT | + |
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Preference number: 3 (lower is better) Translates to: RCLLKVHSRHWR*RLQELYIIIYT Trigger: AGTATATATAATTATATAAAGTTCTTGGAGTCTGCACCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR TCA 90 bp | CCAGAGTCGGCCAGAGGGGGCCTAGGCTTGGATGTCTGTGAGCTTTGGGAGCTGGAGCCTGGTCTCGGTTaGAGCGCTGCAGCTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PESARGGLGLDVCELWELEPGLG*SAAAGP Trigger: CGGCCCAGCTGCAGCGCTTCAACCGAGACCAGGCTC...CAGCTCCCAAAGCTCACAGACATCCAAGCCTAGGCCCCCTCTGGCCGACTCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR CCA 90 bp | AGACACACTCGGATACCGAGGCTCTCAGCCACCAGCTCTCTCTGGCCTGCGAAGAGCCCCCACTGCGTGTaGCGTTCCAGCACCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: RHTRIPRLSATSSLWPAKSPHCV*RSSTSN Trigger: GTTTGAGGTGCTGGAACGCCACACGCAGTGGGGGCT...CTTCGCAGGCCAGAGAGAGCTGGTGGCTGAGAGCCTCGGTATCCGAGTGTGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGTCGGCCAGAGGGGGCCTAGGCTTGGATGTCTGTGAGCTTTGGGAGCTGGGTGAGCTTGCTGCTTaGCCTTCTCCACATCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: PESARGGLGLDVCELWELGELAA*PSPHPP Trigger: AGGCGGATGTGGAGAAGGCCAAGCAGCAAGCTCACC...CAGCTCCCAAAGCTCACAGACATCCAAGCCTAGGCCCCCTCTGGCCGACTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR GCA 90 bp | CAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCCCGACACTGGCGGAAGCCATTCTCCAGCTaGTGCTGGGCCCGACGACCT | + |
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Preference number: 4 (lower is better) Translates to: QTTSPQRCLLKVHSRHWRKPFSS*CWARRP Trigger: AGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTT...CCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR GCA 90 bp | AAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCGCCTGCCATCCGGGGTaGCCAGGCTGCTGTCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: KTRLPNHLSTEMPFEGPFACHPG*PGCCPK Trigger: CTTCGGACAGCAGCCTGGGCACCCCGGATGGCAGGC...GAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR CCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTCGGCCCCCAGGCGGGTaGCCCGGCGTTCGTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRRPPGG*PGVRPC Trigger: ACATGGACGAACGCCGGGCCACCCGCCTGGGGGCCG...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| 3UTR CAA 72 bp | CCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTaGAAGGTCCATTCCCGACACTGGCGGTGCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: PDSQTTSPQRCL*KVHSRHWRCRL Trigger: GAGTCTGCACCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR CAA 72 bp | GTGCGACTGCCAGAGTCGGCCAGAGGGGGCCTAGGCTaGGATGTCTGTGAGCTTTGGGAGCTGCTTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: VRLPESARGGLG*DVCELWELLLK Trigger: TTTCAAAAGCAGCTCCCAAAGCTCACAGACATCCAAGCCTAGGCCCCCTCTGGCCGACTCTGGCAGTCGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR TCA 90 bp | AAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCTCAGGGGGCCTAGCGTaGCGGCTTAGGCTGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: KTRLPNHLSTEMPFEGPFSGGLA*RLRLSP Trigger: AGGGGACAGCCTAAGCCGTCACGCTAGGCCCCCTGA...GAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR CCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCGGCCCCCAGGCGGGTaGCCCGGCGTTCGTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKRPPGG*PGVRPC Trigger: ACATGGACGAACGCCGGGCCACCCGCCTGGGGGCCG...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS-3UTR TCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCAGAGCCTGGTCTCGGTTaGAGCGCTGCAGCTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPEPGLG*SAAAGP Trigger: CGGCCCAGCTGCAGCGCTTCAACCGAGACCAGGCTC...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS-3UTR TCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTGAGCCTGGTCTCGGTTaGAGCGCTGCAGCTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPREPGLG*SAAAGP Trigger: CGGCCCAGCTGCAGCGCTTCAACCGAGACCAGGCTC...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGTCGGCCAGAGGGGGCCTAGGCTTGGATGTCTGTGAGCTTTGGGAGCTGAAGTCATTGACCTCCTaGAGAAGCTGGACAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: PESARGGLGLDVCELWELKSLTS*RSWTND Trigger: GTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTT...CAGCTCCCAAAGCTCACAGACATCCAAGCCTAGGCCCCCTCTGGCCGACTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR GCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGGCCTGCCATCCGGGGTaGCCAGGCTGCTGTCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKACHPG*PGCCPK Trigger: CTTCGGACAGCAGCCTGGGCACCCCGGATGGCAGGC...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS-3UTR GCA 90 bp | AAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCCCAGGGTCTCTGCAATaGGGGGCTCTAAGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KTRLPNHLSTEMPFEGPFPGSLQ*GALSWQ Trigger: CTGCCAGCTTAGAGCCCCGCATTGCAGAGACCCTGG...GAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR CCA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGCGGCCCCCAGGCGGGTaGCCCGGCGTTCGTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: RKLLSHFNLGRIHAGMSARPPGG*PGVRPC Trigger: ACATGGACGAACGCCGGGCCACCCGCCTGGGGGCCG...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR CCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGTGGCGCGGCTACGGCTaGAGGCTGCTCGGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKWRGYG*RLLGAQ Trigger: CTGAGCTCCGAGCAGCCTCCAGCCGTAGCCGCGCCA...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS-3UTR CCA 90 bp | AAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCTGCGGGGCTCTAAGCTaGCAGGGTCCCCCATTTGTG | + |
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Preference number: 4 (lower is better) Translates to: KTRLPNHLSTEMPFEGPFCGALS*QGPPFV Trigger: CACAAATGGGGGACCCTGCCAGCTTAGAGCCCCGCA...GAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| CDS-3UTR CCA 90 bp | CAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCCCGACACTGGCGGCCTGGGATCCACTGTTaGTGCTGCTACTGCTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: QTTSPQRCLLKVHSRHWRPGIHC*CCYCCY Trigger: ATAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGG...CCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
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| 3UTR CAA 72 bp | TCTCTTGGGAAGATACTTTTTCACCAGGCTCCGGAGTaGCTTAGCATAAGCCTGCTCCACCTCCGCGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: SLGKILFHQAPE*LSISLLHLRAF Trigger: GAACGCGCGGAGGTGGAGCAGGCTTATGCTAAGCAACTCCGGAGCCTGGTGAAAAAGTATCTTCCCAAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225664.2 |
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| CDS-3UTR GCA 90 bp | CATCCAAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCTGGTCCTCCTCCTTCTaGAACTCTCGGTTCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPKPDSQTTSPQRCLLKVWSSSF*NSRFRS Trigger: AGAGCGGAACCGAGAGTTGCAGAAGGAGGAGGACCA...GACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR CCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCATTCTCCAGCTGCTGCTaGGCCCGACGACCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPFSSCC*ARRPSW Trigger: CCAGGAAGGTCGTCGGGCCCAGCAGCAGCTGGAGAA...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCAAAGCCATTCTCCAGCTaGTGCTGGGCCCGACGACCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPKPFSS*CWARRP Trigger: AGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTT...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTGCCTGCCATCCGGGGTaGCCAGGCTGCTGTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGACHPG*PGCCPK Trigger: CTTCGGACAGCAGCCTGGGCACCCCGGATGGCAGGC...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTAGCCCCCACTGCGTGTaGCGTTCCAGCACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRSPHCV*RSSTSN Trigger: GTTTGAGGTGCTGGAACGCCACACGCAGTGGGGGCT...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTTGGCGCGGCTACGGCTaGAGGCTGCTCGGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGWRGYG*RLLGAQ Trigger: CTGAGCTCCGAGCAGCCTCCAGCCGTAGCCGCGCCA...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTTGCGGGGCTCTAAGCTaGCAGGGTCCCCCATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRCGALS*QGPPFV Trigger: CACAAATGGGGGACCCTGCCAGCTTAGAGCCCCGCA...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTCTCGGAGGTAAGAGGTaGGCACGTAGCCCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRLGGKR*ARSPQL Trigger: GAGCTGAGGGCTACGTGCCCACCTCTTACCTCCGAG...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | CATCCAAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCTATCTGGGGCATCTGTaGGAAGTAGAAGTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPKPDSQTTSPQRCLLKVYLGHL*EVEVSL Trigger: CAGGCTCACTTCTACTTCTCACAGATGCCCCAGATA...GACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR TCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCATGCTCCGGGGGCAAGTaGCTGAAATCTTCGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPCSGGK*LKSSVA Trigger: GGCTACCGAAGATTTCAGTCACTTGCCCCCGGAGCA...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTTCAGGGGGCCTAGCGTaGCGGCTTAGGCTGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGSGGLA*RLRLSP Trigger: AGGGGACAGCCTAAGCCGTCACGCTAGGCCCCCTGA...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGAAGCCATTCTCCAGCTaGTGCTGGGCCCGACGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKKPFSS*CWARRP Trigger: AGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTT...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTGGTGAGCTTGCTGCTTaGCCTTCTCCACATCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRGELAA*PSPHPP Trigger: AGGCGGATGTGGAGAAGGCCAAGCAGCAAGCTCACC...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGTGCGGGGCTCTAAGCTaGCAGGGTCCCCCATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKCGALS*QGPPFV Trigger: CACAAATGGGGGACCCTGCCAGCTTAGAGCCCCGCA...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | AAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCGAGAAGCTGGACAAATaGCTGCTGCTGGCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KTRLPNHLSTEMPFEGPFEKLDK*LLLAEL Trigger: AAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTC...GAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR TCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGGGCCTGCGAAGTCATTaGCCTCCTGGAGAAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKGLRSH*PPGEAG Trigger: TCCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCC...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGTGCTCCGGGGGCAAGTaGCTGAAATCTTCGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKCSGGK*LKSSVA Trigger: GGCTACCGAAGATTTCAGTCACTTGCCCCCGGAGCA...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAGCTCTCTCTGGCCTaGGAAGTCATTGACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPQLSLA*EVIDLL Trigger: CAGGAGGTCAATGACTTCGCAGGCCAGAGAGAGCTG...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTTCTCGGTTGAAGCGCTaGAGCTGGGCCGCATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRSRLKR*SWAAYS Trigger: TGAATATGCGGCCCAGCTGCAGCGCTTCAACCGAGA...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCGGCGGCCACCTTCATaGCCTCCAAGCATTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKRRPPS*PPSICQ Trigger: TTGGCAAATGCTTGGAGGGCATGAAGGTGGCCGCCG...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTTGGTCCTCCTCCTTCTaGAACTCTCGGTTCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRWSSSF*NSRFRS Trigger: AGAGCGGAACCGAGAGTTGCAGAAGGAGGAGGACCA...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTTTCTCCAGCTGCTGCTaGGCCCGACGACCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGFSSCC*ARRPSW Trigger: CCAGGAAGGTCGTCGGGCCCAGCAGCAGCTGGAGAA...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGGGTGAGCTTGCTGCTTaGCCTTCTCCACATCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKGELAA*PSPHPP Trigger: AGGCGGATGTGGAGAAGGCCAAGCAGCAAGCTCACC...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | AAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCTTGAAGCGCTGCAGCTaGGCCGCATATTCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTRLPNHLSTEMPFEGPFLKRCS*AAYSFL Trigger: CAAGAATGAATATGCGGCCCAGCTGCAGCGCTTCAA...GAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR GCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCAGCTCTCTCTGGCCTaGGAAGTCATTGACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKQLSLA*EVIDLL Trigger: CAGGAGGTCAATGACTTCGCAGGCCAGAGAGAGCTG...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTCGACCTTCCTGGAAGTaGATCTTCCTCTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRRPSWK*IFLSCF Trigger: GAAGCAGGAGAGGAAGATGCACTTCCAGGAAGGTCG...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGTGGTCCTCCTCCTTCTaGAACTCTCGGTTCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKWSSSF*NSRFRS Trigger: AGAGCGGAACCGAGAGTTGCAGAAGGAGGAGGACCA...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCAGGGTCTCTGCAATaGGGGGCTCTAAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGPGSLQ*GALSWQ Trigger: CTGCCAGCTTAGAGCCCCGCATTGCAGAGACCCTGG...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTTCAGCCTCTCAATGTTaGCCAGGGTCTCTGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRSASQC*PGSLQC Trigger: GCATTGCAGAGACCCTGGGCAACATTGAGAGGCTGA...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGAGCCCCCACTGCGTGTaGCGTTCCAGCACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLLSHFNLGRIHAGMSASPHCV*RSSTSN Trigger: GTTTGAGGTGCTGGAACGCCACACGCAGTGGGGGCT...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTAGCCCCCACTGCGTGTaGCGTTCCAGCACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGSPHCV*RSSTSN Trigger: GTTTGAGGTGCTGGAACGCCACACGCAGTGGGGGCT...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTACCTCCTGGAGAAGCTaGACAAATGACTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRTSWRS*TNDCCW Trigger: CCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGT...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCTCGGAGGTAAGAGGTaGGCACGTAGCCCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGLGGKR*ARSPQL Trigger: GAGCTGAGGGCTACGTGCCCACCTCTTACCTCCGAG...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTGGCCTGCGAAGTCATTaGCCTCCTGGAGAAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGGLRSH*PPGEAG Trigger: TCCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCC...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTCTGCTTCATCTCCTGTaGATACTTAGCCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRLLHLL*ILSQLQ Trigger: CTGGAGCTGGCTAAGTATTCACAGGAGATGAAGCAG...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCATATCTGGGGCATCTGTaGGAAGTAGAAGTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPYLGHL*EVEVSL Trigger: CAGGCTCACTTCTACTTCTCACAGATGCCCCAGATA...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCGGCGGCCACCTTCATaGCCTCCAAGCATTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGRRPPS*PPSICQ Trigger: TTGGCAAATGCTTGGAGGGCATGAAGGTGGCCGCCG...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGTCAGCCTCTCAATGTTaGCCAGGGTCTCTGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKSASQC*PGSLQC Trigger: GCATTGCAGAGACCCTGGGCAACATTGAGAGGCTGA...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACCGGCTTTCAGCTTCTaGCAACCAAGCCTCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPPAFSF*QPSLIL Trigger: AAGTATGAGGCTTGGTTGGCAGAAGCTGAAAGCCGG...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTCCGGCTTTCAGCTTCTaGCAACCAAGCCTCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRPAFSF*QPSLIL Trigger: AAGTATGAGGCTTGGTTGGCAGAAGCTGAAAGCCGG...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTATCCACTGTTGGTGCTaGTACTGCTGCTATCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRIHCWC*YCCYQV Trigger: CACCTGATAGCAGCAGTAGCAGCACCAACAGTGGAT...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGGGGATCCACTGTTGGTaGTGCTACTGCTGCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKGIHCW*CYCCYQ Trigger: CTGATAGCAGCAGTAGCAGCACCAACAGTGGATCCC...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGACCTCCTGGAGAAGCTaGACAAATGACTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKTSWRS*TNDCCW Trigger: CCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGT...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTTTGAAGCGCTGCAGCTaGGCCGCATATTCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRLKRCS*AAYSFL Trigger: CAAGAATGAATATGCGGCCCAGCTGCAGCGCTTCAA...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCTGGGATCCACTGTTaGTGCTGCTACTGCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKPGIHC*CCYCCY Trigger: ATAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGG...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCAGGGATGGGGGACGTaGCTTGTTCTTTTTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKQGWGT*LVLFPE Trigger: TTCGGGAAAAAGAACAAGCCACGTCCCCCATCCCTG...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000224885.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGGAGAAGCTGGACAAATaGCTGCTGCTGGCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKEKLDK*LLLAEL Trigger: AAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTC...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGTATCTGGGGCATCTGTaGGAAGTAGAAGTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKYLGHL*EVEVSL Trigger: CAGGCTCACTTCTACTTCTCACAGATGCCCCAGATA...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCAGCTCTCTCTGGCCTaGGAAGTCATTGACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGQLSLA*EVIDLL Trigger: CAGGAGGTCAATGACTTCGCAGGCCAGAGAGAGCTG...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTTCTCGGTTGAAGCGCTaGAGCTGGGCCGCATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGSRLKR*SWAAYS Trigger: TGAATATGCGGCCCAGCTGCAGCGCTTCAACCGAGA...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCAACAAATGACTGCTGCTaGCTGAACTTGACTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPTNDCC*LNLTSG Trigger: CCCTGAAGTCAAGTTCAGCCAGCAGCAGTCATTTGT...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCATGCATCTTCCTCTCCTaGTTCATCTCCTGTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPCIFLS*FISCEY Trigger: GTATTCACAGGAGATGAAGCAGGAGAGGAAGATGCA...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCGACCTTCCTGGAAGTaGATCTTCCTCTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGRPSWK*IFLSCF Trigger: GAAGCAGGAGAGGAAGATGCACTTCCAGGAAGGTCG...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTATAATGGGAACCACCTaGAGTTCAGCCTCTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRIMGTT*SSASDK Trigger: CTTATCAGAGGCTGAACTGCAGGTGGTTCCCATTAT...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCAATAATGGGAACCACCTaGAGTTCAGCCTCTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAGRKILNDKYVQPRGKPIMGTT*SSASDK Trigger: CTTATCAGAGGCTGAACTGCAGGTGGTTCCCATTAT...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTTCAGCCTCTCAATGTTaGCCAGGGTCTCTGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGSASQC*PGSLQC Trigger: GCATTGCAGAGACCCTGGGCAACATTGAGAGGCTGA...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGGGGATCCACTGTTGGTaGTGCTACTGCTGCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKLLSHFNLGRIHAGMSAGIHCW*CYCCYQ Trigger: CTGATAGCAGCAGTAGCAGCACCAACAGTGGATCCC...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTGGGATCCACTGTTGGTaGTGCTACTGCTGCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGGIHCW*CYCCYQ Trigger: CTGATAGCAGCAGTAGCAGCACCAACAGTGGATCCC...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTACCTCCTGGAGAAGCTaGACAAATGACTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGTSWRS*TNDCCW Trigger: CCAGCAGCAGTCATTTGTCCAGCTTCTCCAGGAGGT...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTAAGTCATTGACCTCCTaGAGAAGCTGGACAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRKSLTS*RSWTND Trigger: GTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTT...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCTGGGATCCACTGTTaGTGCTGCTACTGCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGPGIHC*CCYCCY Trigger: ATAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGG...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTGAGAAGCTGGACAAATaGCTGCTGCTGGCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGEKLDK*LLLAEL Trigger: AAGTTCAGCCAGCAGCAGTCATTTGTCCAGCTTCTC...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGCTGCTTCATCTCCTGTaGATACTTAGCCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKLLSHFNLGRIHAGMSALLHLL*ILSQLQ Trigger: CTGGAGCTGGCTAAGTATTCACAGGAGATGAAGCAG...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR GCA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGATAATGGGAACCACCTaGAGTTCAGCCTCTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: QAAGRKILNDKYVQPRGKIMGTT*SSASDK Trigger: CTTATCAGAGGCTGAACTGCAGGTGGTTCCCATTAT...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTATCCACTGTTGGTGCTaGTACTGCTGCTATCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGIHCWC*YCCYQV Trigger: CACCTGATAGCAGCAGTAGCAGCACCAACAGTGGAT...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTTTGAAGCGCTGCAGCTaGGCCGCATATTCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGLKRCS*AAYSFL Trigger: CAAGAATGAATATGCGGCCCAGCTGCAGCGCTTCAA...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGTGCATCTTCCTCTCCTaGTTCATCTCCTGTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLLSHFNLGRIHAGMSACIFLS*FISCEY Trigger: GTATTCACAGGAGATGAAGCAGGAGAGGAAGATGCA...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTAAGTCATTGACCTCCTaGAGAAGCTGGACAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKILNDKYVQPRGKPQVGKSLTS*RSWTND Trigger: GTCATTTGTCCAGCTTCTCCAGGAGGTCAATGACTT...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 90 bp | CTTTTTCCCGAAAGGCCAACGCTTGGCGCGGCTACGGCTGGAGGCTaGTCGGAGCTCAGGCCTGCCATCCGGGGTGCCCAGGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFPERPTLGAATAGG*SELRPAIRGAQAAV Trigger: GACAGCAGCCTGGGCACCCCGGATGGCAGGCCTGAGCTCCGAGCAGCCTCCAGCCGTAGCCGCGCCAAGCGTTGGCCTTTCGGGAAAAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS CCA 90 bp | GCAGTTCAGCCTCTGATAAGAGCCCATACCCGGCCCCCAGGCGGGTaGCCCGGCGTTCGTCCATGTCCTGCAGCTTATCGAATATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVQPLIRAHTRPPGG*PGVRPCPAAYRISG Trigger: CCCAGATATTCGATAAGCTGCAGGACATGGACGAACGCCGGGCCACCCGCCTGGGGGCCGGGTATGGGCTCTTATCAGAGGCTGAACTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 90 bp | GCCACCTTCATGCCCTCCAAGCATTTGCCAATAATGGGAACCACCTaGAGTTCAGCCTCTGATAAGAGCCCATACCCGGCCCCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ATFMPSKHLPIMGTT*SSASDKSPYPAPRR Trigger: CCGCCTGGGGGCCGGGTATGGGCTCTTATCAGAGGCTGAACTGCAGGTGGTTCCCATTATTGGCAAATGCTTGGAGGGCATGAAGGTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 90 bp | TTCCGCTTACTATTCTCCAGCTGTTTGAAGCCATTCTCCAGCTGCTaGTGGGCCCGACGACCTTCCTGGAAGTGCATCTTCCTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLLFSSCLKPFSSC*WARRPSWKCIFLSC Trigger: GCAGGAGAGGAAGATGCACTTCCAGGAAGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTTCAAACAGCTGGAGAATAGTAAGCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 90 bp | GTTGAAGCGCTGCAGCTGGGCCGCATATTCATTCTTGCTCTCTTCTaGCATGTGGTTCCGAAGGTGAGCTTGCTGCTTGGCCTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VEALQLGRIFILALF*HVVPKVSLLLGLLH Trigger: GTGGAGAAGGCCAAGCAGCAAGCTCACCTTCGGAACCACATGGCAGAAGAGAGCAAGAATGAATATGCGGCCCAGCTGCAGCGCTTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS CCA 90 bp | CGCTTACTATTCTCCAGCTGTTTGAAGCCATTCTCCAGCTGCTGCTaGGCCCGACGACCTTCCTGGAAGTGCATCTTCCTCTCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLLFSSCLKPFSSCC*ARRPSWKCIFLSCF Trigger: GAAGCAGGAGAGGAAGATGCACTTCCAGGAAGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTTCAAACAGCTGGAGAATAGTAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 90 bp | AACTTCCGCTTACTATTCTCCAGCTGTTTGAAGCCATTCTCCAGCTaGTGCTGGGCCCGACGACCTTCCTGGAAGTGCATCTTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NFRLLFSSCLKPFSS*CWARRPSWKCIFLS Trigger: GGAGAGGAAGATGCACTTCCAGGAAGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTTCAAACAGCTGGAGAATAGTAAGCGGAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | CATCCAAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCCGCTCTTCCAGCTGTaGCTGAAGTCGCTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HPKPDSQTTSPQRCLLKVPLFQL*LKSLSL Trigger: CAGAGAAAGCGACTTCAGCAACAGCTGGAAGAGCGG...GACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR CAA 90 bp | CAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCCCGACACTGGCGGTCTGAGCTCTCCTTATaGTCCTGGGATCCACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTTSPQRCLLKVHSRHWRSELSL*SWDPLL Trigger: CAACAGTGGATCCCAGGACAATAAGGAGAGCTCAGA...CCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS TCA 90 bp | ATATCTGGGGCATCTGTGAGAAGTAGAAGTGAGCCTGGTCTCGGTTaGAGCGCTGCAGCTGGGCCGCATATTCATTCTTGCTCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISGASVRSRSEPGLG*SAAAGPHIHSCSLL Trigger: CAGAAGAGAGCAAGAATGAATATGCGGCCCAGCTGCAGCGCTTCAACCGAGACCAGGCTCACTTCTACTTCTCACAGATGCCCCAGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | CAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCCCGACACTGGCGGACGAACTTCACGTATTaGTCCAACAAATCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QTTSPQRCLLKVHSRHWRTNFTY*SNKSSP Trigger: GGGGCTGGATTTGTTGGACAAATACGTGAAGTTCGT...CCGCCAGTGTCGGGAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR CAA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTTGGCCTGCGAAGTCATaGACCTCCTGGAGAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRWPAKS*TSWRSW Trigger: CCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCCA...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCAGTTCCGAAGGTGAGCTaGCTGCTTGGCCTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AAGRKILNDKYVQPRGKPVPKVS*LLGLLH Trigger: GTGGAGAAGGCCAAGCAGCAAGCTCACCTTCGGAAC...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCGACTCCCAAACCACCTCTCCACAGAGATGCCTTTTGAAGGTCCATTCATGCCCTCCAAGCATTaGCCAATAATGGGAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: KTRLPNHLSTEMPFEGPFMPSKH*PIMGTT Trigger: GGTGGTTCCCATTATTGGCAAATGCTTGGAGGGCAT...GAATGGACCTTCAAAAGGCATCTCTGTGGAGAGGTGGTTTGGGAGTCGGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR CAA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTTCCTGGGATCCACTGTaGGTGCTGCTACTGCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRSWDPL*VLLLLL Trigger: TAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGGA...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCAGTCCATCCATCACCCTaGTCTTCCTCCATCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAGRKILNDKYVQPRGKPVHPSP*SSSIRL Trigger: CAGCCTGATGGAGGAAGACAAGGGTGATGGATGGAC...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTGATGCTAGCCGCGGTTaGACCGACTTACTGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRDASRG*TDLLIS Trigger: CGAGATCAGTAAGTCGGTCAAACCGCGGCTAGCATC...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224885.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCGCTCTTCCAGCTGTaGCTGAAGTCGCTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QAAGRKILNDKYVQPRGKPLFQL*LKSLSL Trigger: CAGAGAAAGCGACTTCAGCAACAGCTGGAAGAGCGG...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGTCCTGGGATCCACTGTaGGTGCTGCTACTGCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QAAGRKILNDKYVQPRGKSWDPL*VLLLLL Trigger: TAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGGA...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGGTCCATCCATCACCCTaGTCTTCCTCCATCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QAAGRKILNDKYVQPRGKVHPSP*SSSIRL Trigger: CAGCCTGATGGAGGAAGACAAGGGTGATGGATGGAC...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTTGGCCTGCGAAGTCATaGACCTCCTGGAGAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKILNDKYVQPRGKPQVGWPAKS*TSWRSW Trigger: CCAGCTTCTCCAGGAGGTCAATGACTTCGCAGGCCA...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCAGCCGCATATTCATTCTaGCTCTCTTCTGCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGRKILNDKYVQPRGKPAAYSF*LSSAMW Trigger: CCACATGGCAGAAGAGAGCAAGAATGAATATGCGGC...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCCCGTGCCGCATATTCATTCTaGCTCTCTTCTGCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILNDKYVQPRGKPQVGPRAAYSF*LSSAMW Trigger: CCACATGGCAGAAGAGAGCAAGAATGAATATGCGGC...ACGGGGACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCAATGCCCTCCAAGCATTaGCCAATAATGGGAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: AAGRKILNDKYVQPRGKPMPSKH*PIMGTT Trigger: GGTGGTTCCCATTATTGGCAAATGCTTGGAGGGCAT...TGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGGCCGCATATTCATTCTaGCTCTCTTCTGCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QAAGRKILNDKYVQPRGKAAYSF*LSSAMW Trigger: CCACATGGCAGAAGAGAGCAAGAATGAATATGCGGC...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTCCGCTCTTCCAGCTGTaGCTGAAGTCGCTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKILNDKYVQPRGKPQVGPLFQL*LKSLSL Trigger: CAGAGAAAGCGACTTCAGCAACAGCTGGAAGAGCGG...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCTTTTATCTCATTTTAACTTGGGCAGGATACATGCAGGTATGAGTGCGGTCCATCCATCACCCTaGTCTTCCTCCATCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKLLSHFNLGRIHAGMSAVHPSP*SSSIRL Trigger: CAGCCTGATGGAGGAAGACAAGGGTGATGGATGGAC...CGCACTCATACCTGCATGTATCCTGCCCAAGTTAAAATGAGATAAAAGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019631.11 |
||
| CDS-3UTR CAA 90 bp | CAAGCGGCGGGAAGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGACGAACTTCACGTATTaGTCCAACAAATCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QAAGRKILNDKYVQPRGKTNFTY*SNKSSP Trigger: GGGGCTGGATTTGTTGGACAAATACGTGAAGTTCGT...CTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCTTCCCGCCGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTGAGCTGCTCTCCTTATaGTCCTGGGATCCACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKILNDKYVQPRGKPQVGELLSL*SWDPLL Trigger: CAACAGTGGATCCCAGGACAATAAGGAGAGCAGCTC...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTATGCCCTCCAAGCATTaGCCAATAATGGGAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RKILNDKYVQPRGKPQVGMPSKH*PIMGTT Trigger: GGTGGTTCCCATTATTGGCAAATGCTTGGAGGGCAT...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGATCTTAAATGACAAATATGTACAACCACGTGGGAAGCCACAAGTGGGTTCTGAGCTCTCCTTATaGTCCTGGGATCCACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKILNDKYVQPRGKPQVGSELSL*SWDPLL Trigger: CAACAGTGGATCCCAGGACAATAAGGAGAGCTCAGA...ACCCACTTGTGGCTTCCCACGTGGTTGTACATATTTGTCATTTAAGATCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 |
||
| CDS CCA 72 bp | TTTTCCCGAAAGGCCAACGCTTGGCGCGGCTACGGCTaGAGGCTGCTCGGAGCTCAGGCCTGCCATCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSRKANAWRGYG*RLLGAQACHPG Trigger: CCCCGGATGGCAGGCCTGAGCTCCGAGCAGCCTCCAGCCGTAGCCGCGCCAAGCGTTGGCCTTTCGGGAAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS CCA 72 bp | CCTCTGATAAGAGCCCATACCCGGCCCCCAGGCGGGTaGCCCGGCGTTCGTCCATGTCCTGCAGCTTATCGA | + |
|
Preference number: 6 (lower is better) Translates to: PLIRAHTRPPGG*PGVRPCPAAYR Trigger: TCGATAAGCTGCAGGACATGGACGAACGCCGGGCCACCCGCCTGGGGGCCGGGTATGGGCTCTTATCAGAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CAA 90 bp | GTCCCACGGCCACCTCGGAAGCTGCGGAAGGATGCTAGCCGCGGTTaGACCGACTTACTGATCTCGCTCAGTATGGCCAAGGGGTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VPRPPRKLRKDASRG*TDLLISLSMAKGSR Trigger: CCGCGACCCCTTGGCCATACTGAGCGAGATCAGTAAGTCGGTCAAACCGCGGCTAGCATCCTTCCGCAGCTTCCGAGGTGGCCGTGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224152.2 ENSMUST00000224885.2 |
||
| CDS CCA 72 bp | CCACGGTCTTGTTCTTTTTCCCGAAAGGCCAACGCTTaGCGCGGCTACGGCTGGAGGCTGCTCGGAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRSCSFSRKANA*RGYGWRLLGAQ Trigger: CTGAGCTCCGAGCAGCCTCCAGCCGTAGCCGCGCCAAGCGTTGGCCTTTCGGGAAAAAGAACAAGACCGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019631.11 ENSMUST00000224947.2 |
||
| CDS CAA 72 bp | GCCACGGTCTTGTTCTTTTTCCCGAAAGGCCAACGCTaGGCGCGGCTACGGCTGGAGGCTGCTCGGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ATVLFFFPKGQR*ARLRLEAARSS Trigger: TGAGCTCCGAGCAGCCTCCAGCCGTAGCCGCGCCAAGCGTTGGCCTTTCGGGAAAAAGAACAAGACCGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019631.11 ENSMUST00000224947.2 |
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| CDS CAA 90 bp | CCCTCAGCTCCCTGTTTCCTCCTGACCCGCGTCCATCCATCACCCTaGTCTTCCTCCATCAGGCTGAGGTCTTCCCCCTCGGACATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSAPCFLLTRVHPSP*SSSIRLRSSPSDME Trigger: CTCCATGTCCGAGGGGGAAGACCTCAGCCTGATGGAGGAAGACAAGGGTGATGGATGGACGCGGGTCAGGAGGAAACAGGGAGCTGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CCA 72 bp | GGATCCACTGTTGGTGCTGCTACTGCTGCTATCAGGTaGGGCAGTAGTTGGGGGATCAGGGGGCCTAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSTVGAATAAIR*GSSWGIRGPSV Trigger: CACGCTAGGCCCCCTGATCCCCCAACTACTGCCCCACCTGATAGCAGCAGTAGCAGCACCAACAGTGGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CAA 72 bp | CCCTGTTTCCTCCTGACCCGCGTCCATCCATCACCCTaGTCTTCCTCCATCAGGCTGAGGTCTTCCCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PCFLLTRVHPSP*SSSIRLRSSPS Trigger: CGAGGGGGAAGACCTCAGCCTGATGGAGGAAGACAAGGGTGATGGATGGACGCGGGTCAGGAGGAAACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CAA 90 bp | GGCCTGCCATCCGGGGTGCCCAGGCTGCTGTCCGAAGGCACTCGGTaGATAACTTGGCTAAAGTCTTCAAATTCCAAGTCCCCTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPSGVPRLLSEGTR*ITWLKSSNSKSPGR Trigger: CCGCCCAGGGGACTTGGAATTTGAAGACTTTAGCCAAGTTATCAACCGAGTGCCTTCGGACAGCAGCCTGGGCACCCCGGATGGCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS TCA 72 bp | GCGTCCATCCATCACCCTTGTCTTCCTCCATCAGGCTaGGGTCTTCCCCCTCGGACATGGAGACGGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASIHHPCLPPSG*GLPPRTWRRFP Trigger: AGGGAACCGTCTCCATGTCCGAGGGGGAAGACCTCAGCCTGATGGAGGAAGACAAGGGTGATGGATGGACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CAA 90 bp | ATCCGGGGTGCCCAGGCTGCTGTCCGAAGGCACTCGGTTGATAACTaGGCTAAAGTCTTCAAATTCCAAGTCCCCTGGGCGGGCAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: IRGAQAAVRRHSVDN*AKVFKFQVPWAGKP Trigger: GGGTTTGCCCGCCCAGGGGACTTGGAATTTGAAGACTTTAGCCAAGTTATCAACCGAGTGCCTTCGGACAGCAGCCTGGGCACCCCGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 72 bp | ACTTCAGCCTCTCAATGTTGCCCAGGGTCTCTGCAATaGGGGGCTCTAAGCTGGCAGGGTCCCCCATTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSASQCCPGSLQ*GALSWQGPPFV Trigger: CACAAATGGGGGACCCTGCCAGCTTAGAGCCCCGCATTGCAGAGACCCTGGGCAACATTGAGAGGCTGAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS GCA 72 bp | GGGTGTCCTGGCCTTCTGAAGGGGGCTCTTCTGAGCTaGTCTCCTTATTGTCCTGGGATCCACTGTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GCPGLLKGALLS*SPYCPGIHCWC Trigger: GCACCAACAGTGGATCCCAGGACAATAAGGAGAGCAGCTCAGAAGAGCCCCCTTCAGAAGGCCAGGACACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000224152.2 ENSMUST00000224947.2 |
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| CDS CAA 72 bp | CTCCTTCTGCAACTCTCGGTTCCGCTCTTCCAGCTGTaGCTGAAGTCGCTTTCTCTGCTGCTCCGGGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLQLSVPLFQL*LKSLSLLLRGQ Trigger: TTGCCCCCGGAGCAGCAGAGAAAGCGACTTCAGCAACAGCTGGAAGAGCGGAACCGAGAGTTGCAGAAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CAA 72 bp | CCACCTCGGAAGCTGCGGAAGGATGCTAGCCGCGGTTaGACCGACTTACTGATCTCGCTCAGTATGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PPRKLRKDASRG*TDLLISLSMAK Trigger: CTTGGCCATACTGAGCGAGATCAGTAAGTCGGTCAAACCGCGGCTAGCATCCTTCCGCAGCTTCCGAGGTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224152.2 ENSMUST00000224885.2 |
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| CDS CAA 90 bp | GGGGTGTCCTGGCCTTCTGAAGGGGGCTCTTCTGAGCTCTCCTTATaGTCCTGGGATCCACTGTTGGTGCTGCTACTGCTGCTATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GVSWPSEGGSSELSL*SWDPLLVLLLLLSG Trigger: ACCTGATAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGGACAATAAGGAGAGCTCAGAAGAGCCCCCTTCAGAAGGCCAGGACACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 |
||
| CDS CCA 72 bp | TTCTCCAGCTGTTTGAAGCCATTCTCCAGCTGCTGCTaGGCCCGACGACCTTCCTGGAAGTGCATCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSCLKPFSSCC*ARRPSWKCIFL Trigger: GAGGAAGATGCACTTCCAGGAAGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTTCAAACAGCTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CAA 90 bp | GTGTCCTGGCCTTCTGAAGGGGGCTCTTCTGAGCTGCTCTCCTTATaGTCCTGGGATCCACTGTTGGTGCTGCTACTGCTGCTATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSWPSEGGSSELLSL*SWDPLLVLLLLLSG Trigger: ACCTGATAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGGACAATAAGGAGAGCAGCTCAGAAGAGCCCCCTTCAGAAGGCCAGGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000224152.2 ENSMUST00000224947.2 |
||
| CDS GCA 72 bp | CTATTCTCCAGCTGTTTGAAGCCATTCTCCAGCTGCTaGTGGGCCCGACGACCTTCCTGGAAGTGCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFSSCLKPFSSC*WARRPSWKCIF Trigger: GAAGATGCACTTCCAGGAAGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTTCAAACAGCTGGAGAATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CCA 72 bp | CCCAGGCTGCTGTCCGAAGGCACTCGGTTGATAACTTaGCTAAAGTCTTCAAATTCCAAGTCCCCTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PRLLSEGTRLIT*LKSSNSKSPGR Trigger: CCGCCCAGGGGACTTGGAATTTGAAGACTTTAGCCAAGTTATCAACCGAGTGCCTTCGGACAGCAGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS CCA 72 bp | CAGGCTCCTCAAAGTCCTCATCGAACTCAGTATAGATaGGGGTGTCCTGGCCTTCTGAAGGGGGCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QAPQSPHRTQYR*GCPGLLKGALL Trigger: CAGAAGAGCCCCCTTCAGAAGGCCAGGACACCCCCATCTATACTGAGTTCGATGAGGACTTTGAGGAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS CAA 72 bp | TCCACCTCCGCGCGTTCTTTCACGAACTTCACGTATTaGTCCAACAAATCCAGCCCCCACTGCGTGTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: STSARSFTNFTY*SNKSSPHCVWR Trigger: ACGCCACACGCAGTGGGGGCTGGATTTGTTGGACAAATACGTGAAGTTCGTGAAAGAACGCGCGGAGGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS CAA 72 bp | ACAGACTCGGCGGCCACCTTCATGCCCTCCAAGCATTaGCCAATAATGGGAACCACCTGCAGTTCAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TDSAATFMPSKH*PIMGTTCSSAS Trigger: AGAGGCTGAACTGCAGGTGGTTCCCATTATTGGCAAATGCTTGGAGGGCATGAAGGTGGCCGCCGAGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS CAA 72 bp | GCCCAGGCTGCTGTCCGAAGGCACTCGGTTGATAACTaGGCTAAAGTCTTCAAATTCCAAGTCCCCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AQAAVRRHSVDN*AKVFKFQVPWA Trigger: CGCCCAGGGGACTTGGAATTTGAAGACTTTAGCCAAGTTATCAACCGAGTGCCTTCGGACAGCAGCCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS CAA 72 bp | TGGCCTTCTGAAGGGGGCTCTTCTGAGCTCTCCTTATaGTCCTGGGATCCACTGTTGGTGCTGCTACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WPSEGGSSELSL*SWDPLLVLLLL Trigger: CAGCAGTAGCAGCACCAACAGTGGATCCCAGGACAATAAGGAGAGCTCAGAAGAGCCCCCTTCAGAAGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 |
||
| CDS TCA 72 bp | GCATCTGTGAGAAGTAGAAGTGAGCCTGGTCTCGGTTaGAGCGCTGCAGCTGGGCCGCATATTCATTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASVRSRSEPGLG*SAAAGPHIHSC Trigger: GCAAGAATGAATATGCGGCCCAGCTGCAGCGCTTCAACCGAGACCAGGCTCACTTCTACTTCTCACAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 72 bp | GCCCGACGACCTTCCTGGAAGTGCATCTTCCTCTCCTaGTTCATCTCCTGTGAATACTTAGCCAGCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARRPSWKCIFLS*FISCEYLASSR Trigger: TCTGGAGCTGGCTAAGTATTCACAGGAGATGAAGCAGGAGAGGAAGATGCACTTCCAGGAAGGTCGTCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 72 bp | TTACTATTCTCCAGCTGTTTGAAGCCATTCTCCAGCTaGTGCTGGGCCCGACGACCTTCCTGGAAGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LLFSSCLKPFSS*CWARRPSWKCI Trigger: GATGCACTTCCAGGAAGGTCGTCGGGCCCAGCAGCAGCTGGAGAATGGCTTCAAACAGCTGGAGAATAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
||
| CDS GCA 72 bp | ATGCCCTCCAAGCATTTGCCAATAATGGGAACCACCTaGAGTTCAGCCTCTGATAAGAGCCCATACCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: MPSKHLPIMGTT*SSASDKSPYPA Trigger: GGCCGGGTATGGGCTCTTATCAGAGGCTGAACTGCAGGTGGTTCCCATTATTGGCAAATGCTTGGAGGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CCA 72 bp | GAAGGGGGCTCTTCTGAGCTGCTCTCCTTATTGTCCTaGGATCCACTGTTGGTGCTGCTACTGCTGCTATCA | + |
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Preference number: 6 (lower is better) Translates to: EGGSSELLSLLS*DPLLVLLLLLS Trigger: TGATAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGGACAATAAGGAGAGCAGCTCAGAAGAGCCCCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000224152.2 ENSMUST00000224947.2 |
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| CDS CAA 72 bp | TCCGGGGTGCCCAGGCTGCTGTCCGAAGGCACTCGGTaGATAACTTGGCTAAAGTCTTCAAATTCCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SGVPRLLSEGTR*ITWLKSSNSKS Trigger: GGACTTGGAATTTGAAGACTTTAGCCAAGTTATCAACCGAGTGCCTTCGGACAGCAGCCTGGGCACCCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CAA 90 bp | TTAGCATCCACAGACTCGGCGGCCACCTTCATGCCCTCCAAGCATTaGCCAATAATGGGAACCACCTGCAGTTCAGCCTCTGATAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LASTDSAATFMPSKH*PIMGTTCSSASDKS Trigger: GCTCTTATCAGAGGCTGAACTGCAGGTGGTTCCCATTATTGGCAAATGCTTGGAGGGCATGAAGGTGGCCGCCGAGTCTGTGGATGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CCA 72 bp | TCTGAAGGGGGCTCTTCTGAGCTCTCCTTATTGTCCTaGGATCCACTGTTGGTGCTGCTACTGCTGCTATCA | + |
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Preference number: 6 (lower is better) Translates to: SEGGSSELSLLS*DPLLVLLLLLS Trigger: TGATAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGGACAATAAGGAGAGCTCAGAAGAGCCCCCTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 |
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| CDS CAA 72 bp | TCTTCTGAGCTCTCCTTATTGTCCTGGGATCCACTGTaGGTGCTGCTACTGCTGCTATCAGGTGGGGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SSELSLLSWDPL*VLLLLLSGGAV Trigger: TACTGCCCCACCTGATAGCAGCAGTAGCAGCACCAACAGTGGATCCCAGGACAATAAGGAGAGCTCAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019631.11 ENSMUST00000224885.2 |
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| CDS CAA 72 bp | TCAAATTCCAAGTCCCCTGGGCGGGCAAACCCGGACTaGTGTAATTCGATGAGGACCTGTGAGTCGTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SNSKSPGRANPD*CNSMRTCESFL Trigger: TAAGAACGACTCACAGGTCCTCATCGAATTACACAAGTCCGGGTTTGCCCGCCCAGGGGACTTGGAATTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS CAA 90 bp | CTAAAGTCTTCAAATTCCAAGTCCCCTGGGCGGGCAAACCCGGACTaGTGTAATTCGATGAGGACCTGTGAGTCGTTCTTAGCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: LKSSNSKSPGRANPD*CNSMRTCESFLAST Trigger: TGTGGATGCTAAGAACGACTCACAGGTCCTCATCGAATTACACAAGTCCGGGTTTGCCCGCCCAGGGGACTTGGAATTTGAAGACTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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| CDS GCA 72 bp | AAAATGGTAGATAGCCACACACTGGCCGATAGGGGATaGAGGCTCCTCAAAGTCCTCATCGAACTCAGTATA | + |
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Preference number: 6 (lower is better) Translates to: KMVDSHTLADRG*RLLKVLIELSI Trigger: TATACTGAGTTCGATGAGGACTTTGAGGAGCCTGCATCCCCTATCGGCCAGTGTGTGGCTATCTACCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019631.11 ENSMUST00000224152.2 ENSMUST00000224885.2 ENSMUST00000224947.2 |
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