Pregenerated sensors for TRIML1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031651Ensembl transcript IDs: ENSMUST00000059692.4
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAGATTGACAGGCAAGAATGGACAGTGACAACGCTGTTTGTTAAGTGGCCAGCATCTTCATTGCACAACTaGGTTTGTGGAAAGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QIDRQEWTVTTLFVKWPASSLHN*VCGKSL Trigger: CAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGA...TGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| 3UTR TCA 72 bp | CTGGCCTATGACAGATTGACAGGCAAGAATGGACAGTaGCAACGCTGTTTGTTAAGTGGCCAGCACACACAG | + |
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Preference number: 3 (lower is better) Translates to: LAYDRLTGKNGQ*QRCLLSGQHTQ Trigger: CTGTGTGTGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTGTCATAGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| 3UTR-3UTR CAA 90 bp | CAGATTGACAGGCAAGAATGGACAGTGACAACGCTGTTTGTTAAGTGGCCAGCAATTGCACAACTGGGTTaGTGGAAAGTCTTTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: QIDRQEWTVTTLFVKWPAIAQLG*WKVFGE Trigger: CTCCCCAAAGACTTTCCACAAACCCAGTTGTGCAAT...TGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| 3UTR CCA 72 bp | GTGGCCAGCACACACAGCATAGCTCAGATAATCAACTaGGTTAAAGGCAGGGTATCATCTTTCTATTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: VASTHSIAQIIN*VKGRVSSFYSW Trigger: CCAAGAATAGAAAGATGATACCCTGCCTTTAACCCAGTTGATTATCTGAGCTATGCTGTGTGTGCTGGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTCTATTCTTGGTGCTGAATAGATTTTTAGTAGGCTCTTCATTGCACAACGGCTGCTCCTTGGCCTaGTCTTTGCTCAAGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: IFLFLVLNRFLVGSSLHNGCSLA*SLLKAQ Trigger: CTGAGCCTTGAGCAAAGACAAGGCCAAGGAGCAGCC...GTTGTGCAATGAAGAGCCTACTAAAAATCTATTCAGCACCAAGAATAGAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| 3UTR CCA 72 bp | CTGAATAGATTTTTAGTAGGCTCTTCATTGCACAACTaGGTTTGTGGAAAGTCTTTGGGGAGAGGGAAGATT | + |
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Preference number: 3 (lower is better) Translates to: LNRFLVGSSLHN*VCGKSLGRGKI Trigger: AATCTTCCCTCTCCCCAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAAAAATCTATTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | TTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGGGAGAGGGTGCTCATCCTCGCTCTaGAGCACCTGCGATCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LVGSSLHNWVCGKSLGRGCSSSL*STCDLS Trigger: GCTGAGATCGCAGGTGCTGCAGAGCGAGGATGAGCA...CCCTCTCCCCAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | TTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGGGAGAGGGCTCCCACAGATGCTCTaGTCATCCTCGCTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LVGSSLHNWVCGKSLGRGLPQML*SSSLCS Trigger: GCTGCAGAGCGAGGATGAGCAGAGCATCTGTGGGAG...CCCTCTCCCCAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | CAGATTGACAGGCAAGAATGGACAGTGACAACGCTGTTTGTTAAGTGGCCAGCATCCCTCTCCAGGAGCTaGAGCTGGAGCTGTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: QIDRQEWTVTTLFVKWPASLSRS*SWSCSS Trigger: AGAGGAACAGCTCCAGCTCCAGCTCCTGGAGAGGGA...TGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | CAGATTGACAGGCAAGAATGGACAGTGACAACGCTGTTTGTTAAGTGGCCAGCACTCATCCCAGTGATGTaGCACAGGCTCAGTTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: QIDRQEWTVTTLFVKWPALIPVM*HRLSSV Trigger: CACGGAACTGAGCCTGTGTCACATCACTGGGATGAG...TGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | ACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCAAGGCGAGGGAAGCTGTAGATaGGGGACTCATCTGTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: TVTTLMTRLLLGLVFAQGEGSCR*GTHLSH Trigger: ATGCGACAGATGAGTCCCTCATCTACAGCTTCCCTC...GCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | ACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCAAGGCTCAGGGATTTGCTGGGTCAGCTaGATCTCATTTTCCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TTLMTRLLLGLVFAQGSGICWVS*ISFSLS Trigger: GCTGAGGGAAAATGAGATCCAGCTGACCCAGCAAAT...CCCTGAGCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | ACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCAAGGCGCCTTGTTCGTCCCTTaGCTTGGAGGTGAGACATTA | + |
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Preference number: 4 (lower is better) Translates to: TVTTLMTRLLLGLVFAQGALFVP*LGGETL Trigger: TAATGTCTCACCTCCAAGTCAAGGGACGAACAAGGC...GCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | ACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCAAGGCCGTGATGGTGGTCTCTaGAGACTGAAACAACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TVTTLMTRLLLGLVFAQGRDGGL*RLKQQG Trigger: TCCCTGTTGTTTCAGTCTCCAGAGACCACCATCACG...GCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | ACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCAAGGCCAATTTTTAAGCCTATaGGTGAGAAGAGGTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: TVTTLMTRLLLGLVFAQGQFLSL*VRRGPR Trigger: CCGGGGACCTCTTCTCACTCATAGGCTTAAAAATTG...GCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | CAGATTGACAGGCAAGAATGGACAGTGACAACGCTGTTTGTTAAGTGGCCAGCAATCAGACAAAAGCTGTaGCCACACTCGGTGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: QIDRQEWTVTTLFVKWPAIRQKL*PHSVVT Trigger: AGTGACCACCGAGTGTGGGCACAGCTTTTGTCTGAT...TGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTTCCAGGAGCTGGAGCTaGAGCTGTTCCTCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LNTVTTLMTRLLLGLVFASRSWS*SCSSSL Trigger: CAAGGAAGAGGAACAGCTCCAGCTCCAGCTCCTGGA...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTGCATTCTCCCACAGATaGTCTGCTCATCCTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LNTVTTLMTRLLLGLVFAAFSHR*SAHPRS Trigger: AGAGCGAGGATGAGCAGAGCATCTGTGGGAGAATGC...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | ACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCAAGGCAGTTTTTCTTTGTGCTaGTCCTCAGCCTCACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: TVTTLMTRLLLGLVFAQGSFSLC*SSASLE Trigger: CTCAAGTGAGGCTGAGGAGCAGCACAAAGAAAAACT...GCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | CAGATTGACAGGCAAGAATGGACAGTGACAACGCTGTTTGTTAAGTGGCCAGCAAAAGCAGGTAAGCATTaGCTGTGGCTGGATCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: QIDRQEWTVTTLFVKWPAKAGKH*LWLDLE Trigger: CTCTAGATCCAGCCACAGCCAATGCTTACCTGCTTT...TGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | TTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGGGAGAGGGTCAGACACAACGACCTaGTTACAAGTCTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVGSSLHNWVCGKSLGRGSDTTT*LQVFVS Trigger: GGAGACAAAGACTTGTAAGCAGGTCGTTGTGTCTGA...CCCTCTCCCCAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTTGTTCACAGAGTCCTTaGAGATCCCCACTTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LNTVTTLMTRLLLGLVFACSQSP*RSPLPT Trigger: AGTGGGAAGTGGGGATCTGCAAGGACTCTGTGAACA...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | TTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGGGAGAGGGTCTCATGGTTCAGGATaGCCTGAACTTCCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVGSSLHNWVCGKSLGRGSHGSG*PELPSS Trigger: AGAAGAAGGAAGTTCAGGCCATCCTGAACCATGAGA...CCCTCTCCCCAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | AATAGATTTTTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGGTCCCCGGGCGGTTTaGGGAGATTCCCCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NRFLVGSSLHNWVCGKSLGPRAV*GDSPFC Trigger: ACAGAAAGGGGAATCTCCCCAAACCGCCCGGGGACC...CAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAAAAATCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCCCTTGACTTGGAGGTaGGACATTAATGACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: LNTVTTLMTRLLLGLVFAPLTWR*DINDTL Trigger: CAGAGTGTCATTAATGTCTCACCTCCAAGTCAAGGG...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTGATAAAGGTGTGTTGTaGTCCTCCCAACTCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LNTVTTLMTRLLLGLVFADKGVL*SSQLLR Trigger: CCTCAAGAGTTGGGAGGAGCACAACACACCTTTATC...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | AATAGATTTTTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGTCGCTCTGCAGCACCTaGGATCTCAGCTGTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: NRFLVGSSLHNWVCGKSLSLCST*DLSCLP Trigger: TGGCAGACAGCTGAGATCGCAGGTGCTGCAGAGCGA...CAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAAAAATCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTTGGTTCAGGATGGCCTaGACTTCCTTCTTCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LNTVTTLMTRLLLGLVFAWFRMA*TSFFFF Trigger: GAAAAAGAAGAAGGAAGTTCAGGCCATCCTGAACCA...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | CAGATTGACAGGCAAGAATGGACAGTGACAACGCTGTTTGTTAAGTGGCCAGCACCATCAAATCTGTTGTaGACATTTTCTCATGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QIDRQEWTVTTLFVKWPAPSNLL*TFSHGW Trigger: CCAACCATGAGAAAATGTCCACAACAGATTTGATGG...TGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTACACTCGGTGGTCACTaGACTGCTGAAATAATCCAA | + |
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Preference number: 4 (lower is better) Translates to: LNTVTTLMTRLLLGLVFATLGGH*TAEIIQ Trigger: TTGGATTATTTCAGCAGTCCAGTGACCACCGAGTGT...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | AATAGATTTTTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGCTCCTCCCAACTCTTaGGGAGGCACATCAGACAAA | + |
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Preference number: 4 (lower is better) Translates to: NRFLVGSSLHNWVCGKSLAPPNS*GGTSDK Trigger: TTTGTCTGATGTGCCTCCTCAAGAGTTGGGAGGAGC...CAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAAAAATCTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | AATAGATTTTTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGTTGTCAGGTAATTGCTaGCTGGTCCCTCCATACCGC | + |
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Preference number: 4 (lower is better) Translates to: NRFLVGSSLHNWVCGKSLLSGNC*LVPPYR Trigger: GCGGTATGGAGGGACCAGGCAGCAATTACCTGACAA...CAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAAAAATCTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | ATCTTTCTATTCTTGGTGCTGAATAGATTTTTAGTAGGCTCTTCATTGCACAACCACCCAACTAGGCCCTaGCATTCTCCCACAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: IFLFLVLNRFLVGSSLHNHPTRP*HSPTDA Trigger: AGCATCTGTGGGAGAATGCCAGGGCCTAGTTGGGTG...GTTGTGCAATGAAGAGCCTACTAAAAATCTATTCAGCACCAAGAATAGAAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | AATAGATTTTTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGTTGGCTTGAAAATGTaGGGCTCCCAAAGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NRFLVGSSLHNWVCGKSLVGLKM*GSQSPP Trigger: TGGAGGACTTTGGGAGCCCCACATTTTCAAGCCAAC...CAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAAAAATCTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| 3UTR CAA 72 bp | TTCTTGGTGCTGAATAGATTTTTAGTAGGCTCTTCATaGCACAACTGGGTTTGTGGAAAGTCTTTGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FLVLNRFLVGSS*HNWVCGKSLGR Trigger: TCTCCCCAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAAAAATCTATTCAGCACCAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | ATCTTTCTATTCTTGGTGCTGAATAGATTTTTAGTAGGCTCTTCATTGCACAACAGGTCAGCTCTTCCCTaGGGTTCTCCATCAAATCTG | + |
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Preference number: 4 (lower is better) Translates to: IFLFLVLNRFLVGSSLHNRSALP*GSPSNL Trigger: CAGATTTGATGGAGAACCTCAGGGAAGAGCTGACCT...GTTGTGCAATGAAGAGCCTACTAAAAATCTATTCAGCACCAAGAATAGAAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR TCA 90 bp | ATCTTTCTATTCTTGGTGCTGAATAGATTTTTAGTAGGCTCTTCATTGCACAACCCCTTTCAGGGGAGATaGAACCCAGAGACTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: IFLFLVLNRFLVGSSLHNPFQGR*NPETVI Trigger: GATTACAGTCTCTGGGTTTCATCTCCCCTGAAAGGG...GTTGTGCAATGAAGAGCCTACTAAAAATCTATTCAGCACCAAGAATAGAAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | AATAGATTTTTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGGTAAGCATTGGCTGTaGCTGGATCTAGAGTTATAT | + |
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Preference number: 4 (lower is better) Translates to: NRFLVGSSLHNWVCGKSLGKHWL*LDLELY Trigger: ATATAACTCTAGATCCAGCCACAGCCAATGCTTACC...CAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAAAAATCTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR GCA 90 bp | ATCTTTCTATTCTTGGTGCTGAATAGATTTTTAGTAGGCTCTTCATTGCACAACTCCTTGAGGAACTGGTaGATCTTCATGTATTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: IFLFLVLNRFLVGSSLHNSLRNW*IFMYSD Trigger: GTCTGAATACATGAAGATGCACCAGTTCCTCAAGGA...GTTGTGCAATGAAGAGCCTACTAAAAATCTATTCAGCACCAAGAATAGAAAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CCA 90 bp | ATCTTTCTATTCTTGGTGCTGAATAGATTTTTAGTAGGCTCTTCATTGCACAACTCTTCCTTGAGGAACTaGTGCATCTTCATGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: IFLFLVLNRFLVGSSLHNSSLRN*CIFMYS Trigger: TGAATACATGAAGATGCACCAGTTCCTCAAGGAAGA...GTTGTGCAATGAAGAGCCTACTAAAAATCTATTCAGCACCAAGAATAGAAAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS GCA 90 bp | GGCATTCTCCCACAGATGCTCTGCTCATCCTCGCTCTGCAGCACCTaGGATCTCAGCTGTCTGCCAATATTAGCCAGTCTCCCCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GILPQMLCSSSLCST*DLSCLPILASLPSR Trigger: GCGGCTGGGGAGACTGGCTAATATTGGCAGACAGCTGAGATCGCAGGTGCTGCAGAGCGAGGATGAGCAGAGCATCTGTGGGAGAATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS GCA 90 bp | TCAGAGAACACCCAACTAGGCCCTGGCATTCTCCCACAGATGCTCTaGTCATCCTCGCTCTGCAGCACCTGCGATCTCAGCTGTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SENTQLGPGILPQML*SSSLCSTCDLSCLP Trigger: TGGCAGACAGCTGAGATCGCAGGTGCTGCAGAGCGAGGATGAGCAGAGCATCTGTGGGAGAATGCCAGGGCCTAGTTGGGTGTTCTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS GCA 90 bp | CTAGGCCCTGGCATTCTCCCACAGATGCTCTGCTCATCCTCGCTCTaGAGCACCTGCGATCTCAGCTGTCTGCCAATATTAGCCAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: LGPGILPQMLCSSSL*STCDLSCLPILASL Trigger: GAGACTGGCTAATATTGGCAGACAGCTGAGATCGCAGGTGCTGCAGAGCGAGGATGAGCAGAGCATCTGTGGGAGAATGCCAGGGCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CCA 90 bp | ATCCGCCCAATCATTTTGCCGAGGCGGCGGATTTGCTGGGTCAGCTaGATCTCATTTTCCCTCAGCTTCTTCATGTTCGCCTTCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: IRPIILPRRRICWVS*ISFSLSFFMFAFSS Trigger: GGAGGAGAAGGCGAACATGAAGAAGCTGAGGGAAAATGAGATCCAGCTGACCCAGCAAATCCGCCGCCTCGGCAAAATGATTGGGCGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CAA 90 bp | ACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCAAGGCTCAGGGGCTCCTCAGCCTCACTaGAGAAACACGCCTTGTTCG | + |
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Preference number: 5 (lower is better) Translates to: TTLMTRLLLGLVFAQGSGAPQPH*RNTPCS Trigger: CGAACAAGGCGTGTTTCTCAAGTGAGGCTGAGGAGC...CCCTGAGCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CAA 90 bp | ACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTCAAGGCTCAGGGCTGTTCACAGAGTCCTaGCAGATCCCCACTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: TTLMTRLLLGLVFAQGSGLFTES*QIPTSH Trigger: GTGGGAAGTGGGGATCTGCAAGGACTCTGTGAACAG...CCCTGAGCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS TCA 90 bp | AGCTGTCTGCCAATATTAGCCAGTCTCCCCAGCCGCTCGTTGGCTTaGAAATGTGGGGCTCCCAAAGTCCTCCAGCATTCAGGACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: SCLPILASLPSRSLA*KCGAPKVLQHSGQD Trigger: ATCTTGTCCTGAATGCTGGAGGACTTTGGGAGCCCCACATTTTCAAGCCAACGAGCGGCTGGGGAGACTGGCTAATATTGGCAGACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CCA 90 bp | GTAGACTCAATCCGCCCAATCATTTTGCCGAGGCGGCGGATTTGCTaGGTCAGCTGGATCTCATTTTCCCTCAGCTTCTTCATGTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: VDSIRPIILPRRRIC*VSWISFSLSFFMFA Trigger: GGCGAACATGAAGAAGCTGAGGGAAAATGAGATCCAGCTGACCCAGCAAATCCGCCGCCTCGGCAAAATGATTGGGCGGATTGAGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS GCA 90 bp | CAGGTAGACTCAATCCGCCCAATCATTTTGCCGAGGCGGCGGATTTaGTGGGTCAGCTGGATCTCATTTTCCCTCAGCTTCTTCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: QVDSIRPIILPRRRI*WVSWISFSLSFFMF Trigger: GAACATGAAGAAGCTGAGGGAAAATGAGATCCAGCTGACCCAGCAAATCCGCCGCCTCGGCAAAATGATTGGGCGGATTGAGTCTACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS TCA 90 bp | AGCATTCAGGACAAGATAAAGGTGTGTTGTGCTCCTCCCAACTCTTaGGGAGGCACATCAGACAAAAGCTGTGCCCACACTCGGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SIQDKIKVCCAPPNS*GGTSDKSCAHTRWS Trigger: TGACCACCGAGTGTGGGCACAGCTTTTGTCTGATGTGCCTCCTCAAGAGTTGGGAGGAGCACAACACACCTTTATCTTGTCCTGAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS GCA 90 bp | GCTCCCAAAGTCCTCCAGCATTCAGGACAAGATAAAGGTGTGTTGTaGTCCTCCCAACTCTTGAGGAGGCACATCAGACAAAAGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: APKVLQHSGQDKGVL*SSQLLRRHIRQKLC Trigger: GCACAGCTTTTGTCTGATGTGCCTCCTCAAGAGTTGGGAGGAGCACAACACACCTTTATCTTGTCCTGAATGCTGGAGGACTTTGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CAA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTTGCTCCTCCCAACTCTaGAGGAGGCACATCAGACAA | + |
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Preference number: 5 (lower is better) Translates to: LNTVTTLMTRLLLGLVFACSSQL*RRHIRQ Trigger: TTGTCTGATGTGCCTCCTCAAGAGTTGGGAGGAGCA...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CAA 90 bp | CAGATTGACAGGCAAGAATGGACAGTGACAACGCTGTTTGTTAAGTGGCCAGCACAAGATAAAGGTGTGTaGTGCTCCTCCCAACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QIDRQEWTVTTLFVKWPAQDKGV*CSSQLL Trigger: CAAGAGTTGGGAGGAGCACAACACACCTTTATCTTG...TGCTGGCCACTTAACAAACAGCGTTGTCACTGTCCATTCTTGCCTGTCAATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CAA 90 bp | TTGAATACAGTAACCACGTTAATGACTAGGCTGCTCCTTGGCCTTGTCTTTGCTTCTTGGAGTTTTTCTTaGTGCTGCTCCTCAGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LNTVTTLMTRLLLGLVFASWSFS*CCSSAS Trigger: TGAGGCTGAGGAGCAGCACAAAGAAAAACTCCAAGA...AGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAACGTGGTTACTGTATTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS-3UTR CAA 90 bp | TTAGTAGGCTCTTCATTGCACAACTGGGTTTGTGGAAAGTCTTTGGGGAGAGGGTCTCCATCAAATCTGTaGTGGACATTTTCTCATGGT | + |
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Preference number: 5 (lower is better) Translates to: LVGSSLHNWVCGKSLGRGSPSNL*WTFSHG Trigger: ACCATGAGAAAATGTCCACAACAGATTTGATGGAGA...CCCTCTCCCCAAAGACTTTCCACAAACCCAGTTGTGCAATGAAGAGCCTACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS TCA 72 bp | CCAATATTAGCCAGTCTCCCCAGCCGCTCGTTGGCTTaGAAATGTGGGGCTCCCAAAGTCCTCCAGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: PILASLPSRSLA*KCGAPKVLQHS Trigger: TGAATGCTGGAGGACTTTGGGAGCCCCACATTTTCAAGCCAACGAGCGGCTGGGGAGACTGGCTAATATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS GCA 72 bp | GGCATTCTCCCACAGATGCTCTGCTCATCCTCGCTCTaGAGCACCTGCGATCTCAGCTGTCTGCCAATATTA | + |
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Preference number: 6 (lower is better) Translates to: GILPQMLCSSSL*STCDLSCLPIL Trigger: TAATATTGGCAGACAGCTGAGATCGCAGGTGCTGCAGAGCGAGGATGAGCAGAGCATCTGTGGGAGAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CCA 72 bp | ATCCGCCCAATCATTTTGCCGAGGCGGCGGATTTGCTaGGTCAGCTGGATCTCATTTTCCCTCAGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IRPIILPRRRIC*VSWISFSLSFF Trigger: GAAGAAGCTGAGGGAAAATGAGATCCAGCTGACCCAGCAAATCCGCCGCCTCGGCAAAATGATTGGGCGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CCA 72 bp | ATCATTTTGCCGAGGCGGCGGATTTGCTGGGTCAGCTaGATCTCATTTTCCCTCAGCTTCTTCATGTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: IILPRRRICWVS*ISFSLSFFMFA Trigger: GGCGAACATGAAGAAGCTGAGGGAAAATGAGATCCAGCTGACCCAGCAAATCCGCCGCCTCGGCAAAATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CAA 90 bp | CAGCATTCAGGACAAGATAAAGGTGTGTTGTGCTCCTCCCAACTCTaGAGGAGGCACATCAGACAAAAGCTGTGCCCACACTCGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: QHSGQDKGVLCSSQL*RRHIRQKLCPHSVV Trigger: GACCACCGAGTGTGGGCACAGCTTTTGTCTGATGTGCCTCCTCAAGAGTTGGGAGGAGCACAACACACCTTTATCTTGTCCTGAATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CAA 90 bp | GGGGCTCCCAAAGTCCTCCAGCATTCAGGACAAGATAAAGGTGTGTaGTGCTCCTCCCAACTCTTGAGGAGGCACATCAGACAAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GAPKVLQHSGQDKGV*CSSQLLRRHIRQKL Trigger: CAGCTTTTGTCTGATGTGCCTCCTCAAGAGTTGGGAGGAGCACAACACACCTTTATCTTGTCCTGAATGCTGGAGGACTTTGGGAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CAA 90 bp | ACAGGTAGACTCAATCCGCCCAATCATTTTGCCGAGGCGGCGGATTaGCTGGGTCAGCTGGATCTCATTTTCCCTCAGCTTCTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: TGRLNPPNHFAEAAD*LGQLDLIFPQLLHV Trigger: AACATGAAGAAGCTGAGGGAAAATGAGATCCAGCTGACCCAGCAAATCCGCCGCCTCGGCAAAATGATTGGGCGGATTGAGTCTACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS TCA 72 bp | GAGCTTCATGGAAAGGGGTCGGAGGGAAGCTGTAGATaGGGGACTCATCTGTCGCATTGTAGAAGGCTATGT | + |
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Preference number: 6 (lower is better) Translates to: ELHGKGSEGSCR*GTHLSHCRRLC Trigger: ACATAGCCTTCTACAATGCGACAGATGAGTCCCTCATCTACAGCTTCCCTCCGACCCCTTTCCATGAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CAA 72 bp | GGACAAGATAAAGGTGTGTTGTGCTCCTCCCAACTCTaGAGGAGGCACATCAGACAAAAGCTGTGCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: GQDKGVLCSSQL*RRHIRQKLCPH Trigger: GTGTGGGCACAGCTTTTGTCTGATGTGCCTCCTCAAGAGTTGGGAGGAGCACAACACACCTTTATCTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS TCA 72 bp | TTGGAGTTTTTCTTTGTGCTGCTCCTCAGCCTCACTTaGGAAACACGCCTTGTTCGTCCCTTGACTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LEFFFVLLLSLT*ETRLVRPLTWR Trigger: CCTCCAAGTCAAGGGACGAACAAGGCGTGTTTCTCAAGTGAGGCTGAGGAGCAGCACAAAGAAAAACTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS TCA 72 bp | TCAGCCTCACTTGAGAAACACGCCTTGTTCGTCCCTTaGCTTGGAGGTGAGACATTAATGACACTCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SASLEKHALFVP*LGGETLMTLCS Trigger: TGAGCAGAGTGTCATTAATGTCTCACCTCCAAGTCAAGGGACGAACAAGGCGTGTTTCTCAAGTGAGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS GCA 72 bp | TGGAGCTGGAGCTGTTCCTCTTCCTTGAGGAACTGGTaGATCTTCATGTATTCAGACACAACGACCTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: WSWSCSSSLRNW*IFMYSDTTTCL Trigger: TAAGCAGGTCGTTGTGTCTGAATACATGAAGATGCACCAGTTCCTCAAGGAAGAGGAACAGCTCCAGCTCCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CAA 90 bp | GGTGCATCTTCATGTATTCAGACACAACGACCTGCTTACAAGTCTTaGTCTCCTCCTTACACAACATCACTCGTTCCTTCTCATGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GASSCIQTQRPAYKS*SPPYTTSLVPSHGS Trigger: TGAACCATGAGAAGGAACGAGTGATGTTGTGTAAGGAGGAGACAAAGACTTGTAAGCAGGTCGTTGTGTCTGAATACATGAAGATGCACC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS TCA 72 bp | GAAACAACAGGGACTCATACCGATCCATGGCTCCTTTaGCTTCCTCAAAAGATTCTAACGTCAAGTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: ETTGTHTDPWLL*LPQKILTSSSD Trigger: GTCAGAACTTGACGTTAGAATCTTTTGAGGAAGTCAAAGGAGCCATGGATCGGTATGAGTCCCTGTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CAA 72 bp | TCATGTATTCAGACACAACGACCTGCTTACAAGTCTTaGTCTCCTCCTTACACAACATCACTCGTTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SCIQTQRPAYKS*SPPYTTSLVPS Trigger: AGAAGGAACGAGTGATGTTGTGTAAGGAGGAGACAAAGACTTGTAAGCAGGTCGTTGTGTCTGAATACATGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS CAA 72 bp | TTCCGTAAAATATTTATGATATCTTGGAGTTTTTCTTaGTGCTGCTCCTCAGCCTCACTTGAGAAACACGCC | + |
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Preference number: 6 (lower is better) Translates to: FRKIFMISWSFS*CCSSASLEKHA Trigger: GGCGTGTTTCTCAAGTGAGGCTGAGGAGCAGCACAAAGAAAAACTCCAAGATATCATAAATATTTTACGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS TCA 72 bp | AACATCACTCGTTCCTTCTCATGGTTCAGGATGGCCTaGACTTCCTTCTTCTTTTTCCGTAAAATATTTATG | + |
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Preference number: 6 (lower is better) Translates to: NITRSFSWFRMA*TSFFFFRKIFM Trigger: CATAAATATTTTACGGAAAAAGAAGAAGGAAGTTCAGGCCATCCTGAACCATGAGAAGGAACGAGTGATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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| CDS GCA 72 bp | AAAATATTTATGATATCTTGGAGTTTTTCTTTGTGCTaGTCCTCAGCCTCACTTGAGAAACACGCCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KIFMISWSFSLC*SSASLEKHALF Trigger: GAACAAGGCGTGTTTCTCAAGTGAGGCTGAGGAGCAGCACAAAGAAAAACTCCAAGATATCATAAATATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059692.4 |
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