Pregenerated sensors for TRIM80 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070332Ensembl transcript IDs: ENSMUST00000093914.5
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGTTGCGACGGGGGCGACCGCTCAGCGGAGGGCTGCGACGGTAGGTaGCTCCCAGGCACATCCACGAGTTGGACACCTCAGCCTCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: CCDGGDRSAEGCDGR*LPGTSTSWTPQPPS Trigger: ACTGGGAGGCTGAGGTGTCCAACTCGTGGATGTGCCTGGGAGTCACCTACCGTCGCAGCCCTCCGCTGAGCGGTCGCCCCCGTCGCAACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | GTCACAGGGCACATCTGTGGGGCCAGCCAGGCCCCACAAGGACCCTaGGGTCTGGCTCTTGGCCTGGGTGAAGCAAGCCACCATCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: VTGHICGASQAPQGP*GLALGLGEASHHLP Trigger: GGGGAGATGGTGGCTTGCTTCACCCAGGCCAAGAGCCAGACCTCAGGGTCCTTGTGGGGCCTGGCTGGCCCCACAGATGTGCCCTGTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | GGTTCACGTCGCCCGCCACGCTGTAGAAGGACAGGCAGCCAGTCCTaGAGTCCAGCGCCACGCCGAGCGTGTGGTGGTAGGATCCGTGTA | + |
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Preference number: 5 (lower is better) Translates to: GSRRPPRCRRTGSQS*SPAPRRACGGRIRV Trigger: TACACGGATCCTACCACCACACGCTCGGCGTGGCGCTGGACTTCAGGACTGGCTGCCTGTCCTTCTACAGCGTGGCGGGCGACGTGAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 90 bp | AGCCAGACGCTGTCCCCCTCCAACTTGAGCAGCCGGTTGTGGCTTTaGTGGATAGAGTTGCCCAGCTTTCCTAGGGCGGCCGCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SQTLSPSNLSSRLWL*WIELPSFPRAAASS Trigger: GGAGGAGGCGGCCGCCCTAGGAAAGCTGGGCAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGACAGCGTCTGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | CTGTGGAGCCAGACGCTGTCCCCCTCCAACTTGAGCAGCCGGTTGTaGCTTTGCTGGATAGAGTTGCCCAGCTTTCCTAGGGCGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LWSQTLSPSNLSSRL*LCWIELPSFPRAAA Trigger: GGCGGCCGCCCTAGGAAAGCTGGGCAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGACAGCGTCTGGCTCCACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | CAGACGCTGTCCCCCTCCAACTTGAGCAGCCGGTTGTGGCTTTGCTaGATAGAGTTGCCCAGCTTTCCTAGGGCGGCCGCCTCCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: QTLSPSNLSSRLWLC*IELPSFPRAAASSF Trigger: GAAGGAGGAGGCGGCCGCCCTAGGAAAGCTGGGCAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGACAGCGTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 90 bp | AAGGAAGCCACACACTGCAGGCATGACTTGGCTGCCCTCAGCTTCTaGGGAGAGCAAAAGTCACAGGGCACATCTGTGGGGCCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KEATHCRHDLAALSF*GEQKSQGTSVGPAR Trigger: CCTGGCTGGCCCCACAGATGTGCCCTGTGACTTTTGCTCTCCGCAGAAGCTGAGGGCAGCCAAGTCATGCCTGCAGTGTGTGGCTTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | TTGCGGCACAAGCGGTTCGTGAGGTCCCACACTGGGTCCAACAGCTaGTGGTCCTGGAACAGCTGGTCCTCAAAGTGGCTGCGCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: LRHKRFVRSHTGSNS*WSWNSWSSKWLRRC Trigger: ACATCTGCGCAGCCACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGTGTGGGACCTCACGAACCGCTTGTGCCGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | GAGCTTGCGATGCTTGCGGCACAAGCGGTTCGTGAGGTCCCACACTaGGTCCAACAGCTGGTGGTCCTGGAACAGCTGGTCCTCAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: ELAMLAAQAVREVPH*VQQLVVLEQLVLKV Trigger: CACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGTGTGGGACCTCACGAACCGCTTGTGCCGCAAGCATCGCAAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | GTTGTGCCACACAGAGAACTTGAGCGAATCCCACTCCAGACACCATaGGTAGGGGTTGCGGCCCAGCAGGTAGACGATGTTGCGACGGGG | + |
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Preference number: 5 (lower is better) Translates to: VVPHRELERIPLQTP*VGVAAQQVDDVATG Trigger: CCCCGTCGCAACATCGTCTACCTGCTGGGCCGCAACCCCTACTCATGGTGTCTGGAGTGGGATTCGCTCAAGTTCTCTGTGTGGCACAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | AACTCCTGTAGGAATTGCTCATCACTCCTGTTGGCGAGCAGGCTGTaGAGCCAGACGCTGTCCCCCTCCAACTTGAGCAGCCGGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: NSCRNCSSLLLASRL*SQTLSPSNLSSRLW Trigger: CCACAACCGGCTGCTCAAGTTGGAGGGGGACAGCGTCTGGCTCCACAGCCTGCTCGCCAACAGGAGTGATGAGCAATTCCTACAGGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | ATGTCCATCAGCCTGATCCGGAGCTGCGACAGGGTCTCTGGCAGCTaGAGGAAGCTCTGTGTCTCCTCACAGTTGGTGCCTAGCAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: MSISLIRSCDRVSGS*RKLCVSSQLVPSKG Trigger: ACCCTTGCTAGGCACCAACTGTGAGGAGACACAGAGCTTCCTTCAGCTGCCAGAGACCCTGTCGCAGCTCCGGATCAGGCTGATGGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 90 bp | TGGGACAGAGGACTTGGTCTTCCAACATGTGCTGACTGCTGTTGCTaGCCATCAGGAGATGGAGCGGGGTTCTGGAGGGCTGGGAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: WDRGLGLPTCADCCC*PSGDGAGFWRAGKR Trigger: TCTCTTCCCAGCCCTCCAGAACCCCGCTCCATCTCCTGATGGGCAGCAACAGCAGTCAGCACATGTTGGAAGACCAAGTCCTCTGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | GTGAGGTCCCACACTGGGTCCAACAGCTGGTGGTCCTGGAACAGCTaGTCCTCAAAGTGGCTGCGCAGATGTTTCTCACACAAGGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: VRSHTGSNSWWSWNS*SSKWLRRCFSHKEA Trigger: GGCTTCCTTGTGTGAGAAACATCTGCGCAGCCACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGTGTGGGACCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | GCTGCGCAGATGTTTCTCACACAAGGAAGCCACACACTGCAGGCATaGCTTGGCTGCCCTCAGCTTCTGCGGAGAGCAAAAGTCACAGGG | + |
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Preference number: 5 (lower is better) Translates to: AAQMFLTQGSHTLQA*LGCPQLLRRAKVTG Trigger: CCCTGTGACTTTTGCTCTCCGCAGAAGCTGAGGGCAGCCAAGTCATGCCTGCAGTGTGTGGCTTCCTTGTGTGAGAAACATCTGCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | ACTGGGTCCAACAGCTGGTGGTCCTGGAACAGCTGGTCCTCAAAGTaGCTGCGCAGATGTTTCTCACACAAGGAAGCCACACACTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: TGSNSWWSWNSWSSK*LRRCFSHKEATHCR Trigger: CCTGCAGTGTGTGGCTTCCTTGTGTGAGAAACATCTGCGCAGCCACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | ATCCGTGTAGCACCGTCTGTGTGTTGTTGTGCCACACAGAGAACTTaGGCGAATCCCACTCCAGACACCATGAGTAGGGGTTGCGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: IRVAPSVCCCATQRT*ANPTPDTMSRGCGP Trigger: TGGGCCGCAACCCCTACTCATGGTGTCTGGAGTGGGATTCGCTCAAGTTCTCTGTGTGGCACAACAACACACAGACGGTGCTACACGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | TGGTGCCTAGCAAGGGTTCCACGCAGGCAGGGAAGTGCTTCAGTTTaGGGAACTCCTGTAGGAATTGCTCATCACTCCTGTTGGCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: WCLARVPRRQGSASV*GTPVGIAHHSCWRA Trigger: TGCTCGCCAACAGGAGTGATGAGCAATTCCTACAGGAGTTCCCCAAACTGAAGCACTTCCCTGCCTGCGTGGAACCCTTGCTAGGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | AGGGCTCCAGAAGGATGCCCAAGTTCAACACCGAGTGTGTTTCCTTaGACAAGAACAGCTCTTCGCTGGCCGTGCAGGGGTCAAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: RAPEGCPSSTPSVFP*TRTALRWPCRGQSS Trigger: TGAACTTTGACCCCTGCACGGCCAGCGAAGAGCTGTTCTTGTTCAAGGAAACACACTCGGTGTTGAACTTGGGCATCCTTCTGGAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 90 bp | AGGGCGGCCGCCTCCTCCTTCTCCACAAAATCCAAGACCTTCATCTaGAGCTGTTTAATCTCATGGAGGATCTCTGAGAAGCAGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RAAASSFSTKSKTFI*SCLISWRISEKQVS Trigger: GGACACCTGCTTCTCAGAGATCCTCCATGAGATTAAACAGCTGCAGATGAAGGTCTTGGATTTTGTGGAGAAGGAGGAGGCGGCCGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 90 bp | ACAAGAACAGCTCTTCGCTGGCCGTGCAGGGGTCAAAGTTCAGGTTaGAGTAATTCTGGAGCAGTGTCTTTCTCTCCACAGTTCCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TRTALRWPCRGQSSG*SNSGAVSFSPQFRA Trigger: TGCCCGGAACTGTGGAGAGAAAGACACTGCTCCAGAATTACTGCAACCTGAACTTTGACCCCTGCACGGCCAGCGAAGAGCTGTTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | TGGAGAAGGCCTCTCTGCACTGGGGGCAATAGTAAGTCTCTCCAATaGCAGCCTGGTGGTCCCAGAAATTCTGAAGGCAAGTCATACAGA | + |
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Preference number: 5 (lower is better) Translates to: WRRPLCTGGNSKSLQ*QPGGPRNSEGKSYR Trigger: TCTGTATGACTTGCCTTCAGAATTTCTGGGACCACCAGGCTGCCATTGGAGAGACTTACTATTGCCCCCAGTGCAGAGAGGCCTTCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 90 bp | TTCTCCACAAAATCCAAGACCTTCATCTGCAGCTGTTTAATCTCATaGAGGATCTCTGAGAAGCAGGTGTCCACCTCGTCTCGCATGGTC | + |
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Preference number: 5 (lower is better) Translates to: FSTKSKTFICSCLIS*RISEKQVSTSSRMV Trigger: GACCATGCGAGACGAGGTGGACACCTGCTTCTCAGAGATCCTCCATGAGATTAAACAGCTGCAGATGAAGGTCTTGGATTTTGTGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | AGAGAAAACTCACTCGTCCCTGGTGTTTCTGACTGTCAGAGGCAATaGTCAGCATCTGGTTCTCCACATTGGCCTGAATCTTCCGAACTT | + |
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Preference number: 5 (lower is better) Translates to: RENSLVPGVSDCQRQ*SASGSPHWPESSEL Trigger: AAGTTCGGAAGATTCAGGCCAATGTGGAGAACCAGATGCTGATCATTGCCTCTGACAGTCAGAAACACCAGGGACGAGTGAGTTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 90 bp | ATCCAAGACCTTCATCTGCAGCTGTTTAATCTCATGGAGGATCTCTaGGAAGCAGGTGTCCACCTCGTCTCGCATGGTCTGAATCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: IQDLHLQLFNLMEDL*EAGVHLVSHGLNQF Trigger: AAACTGATTCAGACCATGCGAGACGAGGTGGACACCTGCTTCTCAGAGATCCTCCATGAGATTAAACAGCTGCAGATGAAGGTCTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | GGGGGCGACCGCTCAGCGGAGGGCTGCGACGGTAGGTaGCTCCCAGGCACATCCACGAGTTGGACACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GGDRSAEGCDGR*LPGTSTSWTPQ Trigger: CTGAGGTGTCCAACTCGTGGATGTGCCTGGGAGTCACCTACCGTCGCAGCCCTCCGCTGAGCGGTCGCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | CGCCCGCCACGCTGTAGAAGGACAGGCAGCCAGTCCTaGAGTCCAGCGCCACGCCGAGCGTGTGGTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RPPRCRRTGSQS*SPAPRRACGGR Trigger: CCTACCACCACACGCTCGGCGTGGCGCTGGACTTCAGGACTGGCTGCCTGTCCTTCTACAGCGTGGCGGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | ATGAGTAGGGGTTGCGGCCCAGCAGGTAGACGATGTTaGGACGGGGGCGACCGCTCAGCGGAGGGCTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: MSRGCGPAGRRC*DGGDRSAEGCD Trigger: GTCGCAGCCCTCCGCTGAGCGGTCGCCCCCGTCGCAACATCGTCTACCTGCTGGGCCGCAACCCCTACTCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 72 bp | CCAGCCAGGCCCCACAAGGACCCTGAGGTCTGGCTCTaGGCCTGGGTGAAGCAAGCCACCATCTCCCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: PARPHKDPEVWL*AWVKQATISPR Trigger: CCTCGGGGAGATGGTGGCTTGCTTCACCCAGGCCAAGAGCCAGACCTCAGGGTCCTTGTGGGGCCTGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 72 bp | GACAGGCCTGGGCAGCACAGAACCTGGGGCCACTGCTaGAAGCCCGGTAACGGGCTGTTGGTGGTCGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: DRPGQHRTWGHC*KPGNGLLVVEG Trigger: GCCCTCGACCACCAACAGCCCGTTACCGGGCTTCAAGCAGTGGCCCCAGGTTCTGTGCTGCCCAGGCCTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | TCGGACAGGCCTGGGCAGCACAGAACCTGGGGCCACTaGTTGAAGCCCGGTAACGGGCTGTTGGTGGTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SDRPGQHRTWGH*LKPGNGLLVVE Trigger: CTCGACCACCAACAGCCCGTTACCGGGCTTCAAGCAGTGGCCCCAGGTTCTGTGCTGCCCAGGCCTGTCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 90 bp | TTGGCCTGGGTGAAGCAAGCCACCATCTCCCCGAGGATGACGTTCTaGCAGAGGCGGGGCCTGCTGGAGAAGGCCTCTCTGCACTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LAWVKQATISPRMTF*QRRGLLEKASLHWG Trigger: CCCCCAGTGCAGAGAGGCCTTCTCCAGCAGGCCCCGCCTCTGCAAGAACGTCATCCTCGGGGAGATGGTGGCTTGCTTCACCCAGGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | CGGTTCGTGAGGTCCCACACTGGGTCCAACAGCTGGTaGTCCTGGAACAGCTGGTCCTCAAAGTGGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: RFVRSHTGSNSW*SWNSWSSKWLR Trigger: GCGCAGCCACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGTGTGGGACCTCACGAACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | TCCCCCTCCAACTTGAGCAGCCGGTTGTGGCTTTGCTaGATAGAGTTGCCCAGCTTTCCTAGGGCGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SPSNLSSRLWLC*IELPSFPRAAA Trigger: GGCGGCCGCCCTAGGAAAGCTGGGCAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 72 bp | GTGAAGCAAGCCACCATCTCCCCGAGGATGACGTTCTaGCAGAGGCGGGGCCTGCTGGAGAAGGCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VKQATISPRMTF*QRRGLLEKASL Trigger: CAGAGAGGCCTTCTCCAGCAGGCCCCGCCTCTGCAAGAACGTCATCCTCGGGGAGATGGTGGCTTGCTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 72 bp | ACCTGGGGCCACTGCTTGAAGCCCGGTAACGGGCTGTaGGTGGTCGAGGGCTCCAGAAGGATGCCCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: TWGHCLKPGNGL*VVEGSRRMPKF Trigger: GAACTTGGGCATCCTTCTGGAGCCCTCGACCACCAACAGCCCGTTACCGGGCTTCAAGCAGTGGCCCCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 90 bp | CAGCACAGAACCTGGGGCCACTGCTTGAAGCCCGGTAACGGGCTGTaGGTGGTCGAGGGCTCCAGAAGGATGCCCAAGTTCAACACCGAG | + |
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Preference number: 6 (lower is better) Translates to: QHRTWGHCLKPGNGL*VVEGSRRMPKFNTE Trigger: CTCGGTGTTGAACTTGGGCATCCTTCTGGAGCCCTCGACCACCAACAGCCCGTTACCGGGCTTCAAGCAGTGGCCCCAGGTTCTGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | CTGTCCCCCTCCAACTTGAGCAGCCGGTTGTGGCTTTaGTGGATAGAGTTGCCCAGCTTTCCTAGGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSPSNLSSRLWL*WIELPSFPRAA Trigger: GGCCGCCCTAGGAAAGCTGGGCAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | ATGCTTGCGGCACAAGCGGTTCGTGAGGTCCCACACTaGGTCCAACAGCTGGTGGTCCTGGAACAGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: MLAAQAVREVPH*VQQLVVLEQLV Trigger: GACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGTGTGGGACCTCACGAACCGCTTGTGCCGCAAGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 90 bp | CTGTTGGCGAGCAGGCTGTGGAGCCAGACGCTGTCCCCCTCCAACTaGAGCAGCCGGTTGTGGCTTTGCTGGATAGAGTTGCCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLASRLWSQTLSPSN*SSRLWLCWIELPSF Trigger: AAAGCTGGGCAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGACAGCGTCTGGCTCCACAGCCTGCTCGCCAACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | GTGAGGTCCCACACTGGGTCCAACAGCTGGTGGTCCTaGAACAGCTGGTCCTCAAAGTGGCTGCGCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: VRSHTGSNSWWS*NSWSSKWLRRC Trigger: ACATCTGCGCAGCCACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGTGTGGGACCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | AAGCGGTTCGTGAGGTCCCACACTGGGTCCAACAGCTaGTGGTCCTGGAACAGCTGGTCCTCAAAGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KRFVRSHTGSNS*WSWNSWSSKWL Trigger: CAGCCACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGTGTGGGACCTCACGAACCGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | AGGAATTGCTCATCACTCCTGTTGGCGAGCAGGCTGTaGAGCCAGACGCTGTCCCCCTCCAACTTGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RNCSSLLLASRL*SQTLSPSNLSS Trigger: GCTGCTCAAGTTGGAGGGGGACAGCGTCTGGCTCCACAGCCTGCTCGCCAACAGGAGTGATGAGCAATTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | TGGGGAACTCCTGTAGGAATTGCTCATCACTCCTGTTaGCGAGCAGGCTGTGGAGCCAGACGCTGTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: WGTPVGIAHHSC*RAGCGARRCPP Trigger: AGGGGGACAGCGTCTGGCTCCACAGCCTGCTCGCCAACAGGAGTGATGAGCAATTCCTACAGGAGTTCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 72 bp | AGCAGGCTGTGGAGCCAGACGCTGTCCCCCTCCAACTaGAGCAGCCGGTTGTGGCTTTGCTGGATAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SRLWSQTLSPSN*SSRLWLCWIEL Trigger: CAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGACAGCGTCTGGCTCCACAGCCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 72 bp | TTGGGGAACTCCTGTAGGAATTGCTCATCACTCCTGTaGGCGAGCAGGCTGTGGAGCCAGACGCTGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: LGNSCRNCSSLL*ASRLWSQTLSP Trigger: GGGGGACAGCGTCTGGCTCCACAGCCTGCTCGCCAACAGGAGTGATGAGCAATTCCTACAGGAGTTCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 90 bp | TCCCCCTCCAACTTGAGCAGCCGGTTGTGGCTTTGCTGGATAGAGTaGCCCAGCTTTCCTAGGGCGGCCGCCTCCTCCTTCTCCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: SPSNLSSRLWLCWIE*PSFPRAAASSFSTK Trigger: TTTTGTGGAGAAGGAGGAGGCGGCCGCCCTAGGAAAGCTGGGCAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | GGACTTGGTCTTCCAACATGTGCTGACTGCTGTTGCTaGCCATCAGGAGATGGAGCGGGGTTCTGGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GLGLPTCADCCC*PSGDGAGFWRA Trigger: AGCCCTCCAGAACCCCGCTCCATCTCCTGATGGGCAGCAACAGCAGTCAGCACATGTTGGAAGACCAAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | ACACACTGCAGGCATGACTTGGCTGCCCTCAGCTTCTaGGGAGAGCAAAAGTCACAGGGCACATCTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: THCRHDLAALSF*GEQKSQGTSVG Trigger: CCCCACAGATGTGCCCTGTGACTTTTGCTCTCCGCAGAAGCTGAGGGCAGCCAAGTCATGCCTGCAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | GCAGCTGAAGGAAGCTCTGTGTCTCCTCACAGTTGGTaGCTAGCAAGGGTTCCACGCAGGCAGGGAAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: AAEGSSVSPHSW*LARVPRRQGSA Trigger: AGCACTTCCCTGCCTGCGTGGAACCCTTGCTAGGCACCAACTGTGAGGAGACACAGAGCTTCCTTCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | CAGACGCTGTCCCCCTCCAACTTGAGCAGCCGGTTGTaGCTTTGCTGGATAGAGTTGCCCAGCTTTCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: QTLSPSNLSSRL*LCWIELPSFPR Trigger: CCTAGGAAAGCTGGGCAACTCTATCCAGCAAAGCCACAACCGGCTGCTCAAGTTGGAGGGGGACAGCGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 90 bp | TGCTTCAGTTTGGGGAACTCCTGTAGGAATTGCTCATCACTCCTGTaGGCGAGCAGGCTGTGGAGCCAGACGCTGTCCCCCTCCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: CFSLGNSCRNCSSLL*ASRLWSQTLSPSNL Trigger: CAAGTTGGAGGGGGACAGCGTCTGGCTCCACAGCCTGCTCGCCAACAGGAGTGATGAGCAATTCCTACAGGAGTTCCCCAAACTGAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | CTGCGCAGATGTTTCTCACACAAGGAAGCCACACACTaGAGGCATGACTTGGCTGCCCTCAGCTTCTGCGGA | + |
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Preference number: 6 (lower is better) Translates to: LRRCFSHKEATH*RHDLAALSFCG Trigger: TCCGCAGAAGCTGAGGGCAGCCAAGTCATGCCTGCAGTGTGTGGCTTCCTTGTGTGAGAAACATCTGCGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | CACACTGGGTCCAACAGCTGGTGGTCCTGGAACAGCTaGTCCTCAAAGTGGCTGCGCAGATGTTTCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: HTGSNSWWSWNS*SSKWLRRCFSH Trigger: GTGTGAGAAACATCTGCGCAGCCACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTTGGACCCAGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 90 bp | TTGGTGCCTAGCAAGGGTTCCACGCAGGCAGGGAAGTGCTTCAGTTaGGGGAACTCCTGTAGGAATTGCTCATCACTCCTGTTGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: LVPSKGSTQAGKCFS*GNSCRNCSSLLLAS Trigger: GCTCGCCAACAGGAGTGATGAGCAATTCCTACAGGAGTTCCCCAAACTGAAGCACTTCCCTGCCTGCGTGGAACCCTTGCTAGGCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | CAAATGGGACAGAGGACTTGGTCTTCCAACATGTGCTaGCTGCTGTTGCTGCCCATCAGGAGATGGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: QMGQRTWSSNMC*LLLLPIRRWSG Trigger: CCCGCTCCATCTCCTGATGGGCAGCAACAGCAGTCAGCACATGTTGGAAGACCAAGTCCTCTGTCCCATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | CACAGAGAACTTGAGCGAATCCCACTCCAGACACCATaGGTAGGGGTTGCGGCCCAGCAGGTAGACGATGTT | + |
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Preference number: 6 (lower is better) Translates to: HRELERIPLQTP*VGVAAQQVDDV Trigger: AACATCGTCTACCTGCTGGGCCGCAACCCCTACTCATGGTGTCTGGAGTGGGATTCGCTCAAGTTCTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | GGGAAGTGCTTCAGTTTGGGGAACTCCTGTAGGAATTaGTCATCACTCCTGTTGGCGAGCAGGCTGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GKCFSLGNSCRN*SSLLLASRLWS Trigger: GCTCCACAGCCTGCTCGCCAACAGGAGTGATGAGCAATTCCTACAGGAGTTCCCCAAACTGAAGCACTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 90 bp | AGTGACTGGGTTGCAGAACACCTCCAGGCAAATGGGACAGAGGACTaGGTCTTCCAACATGTGCTGACTGCTGTTGCTGCCCATCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SDWVAEHLQANGTED*VFQHVLTAVAAHQE Trigger: CTCCTGATGGGCAGCAACAGCAGTCAGCACATGTTGGAAGACCAAGTCCTCTGTCCCATTTGCCTGGAGGTGTTCTGCAACCCAGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | GTCTCTCCAATGGCAGCCTGGTGGTCCCAGAAATTCTaGAGGCAAGTCATACAGAAGTTATGGCCGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: VSPMAAWWSQKF*RQVIQKLWPQA Trigger: CGCCTGCGGCCATAACTTCTGTATGACTTGCCTTCAGAATTTCTGGGACCACCAGGCTGCCATTGGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | GAGGCAATGATCAGCATCTGGTTCTCCACATTGGCCTaGATCTTCCGAACTTCCACCTCTTTGCGGGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: EAMISIWFSTLA*IFRTSTSLRAR Trigger: ACGGGCCCGCAAAGAGGTGGAAGTTCGGAAGATTCAGGCCAATGTGGAGAACCAGATGCTGATCATTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | GCACCGTCTGTGTGTTGTTGTGCCACACAGAGAACTTaGGCGAATCCCACTCCAGACACCATGAGTAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: APSVCCCATQRT*ANPTPDTMSRG Trigger: ACCCCTACTCATGGTGTCTGGAGTGGGATTCGCTCAAGTTCTCTGTGTGGCACAACAACACACAGACGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | TTGGTGCCTAGCAAGGGTTCCACGCAGGCAGGGAAGTaGTTCAGTTTGGGGAACTCCTGTAGGAATTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LVPSKGSTQAGK*FSLGNSCRNCS Trigger: TGAGCAATTCCTACAGGAGTTCCCCAAACTGAAGCACTTCCCTGCCTGCGTGGAACCCTTGCTAGGCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | CCTCTCTGCACTGGGGGCAATAGTAAGTCTCTCCAATaGCAGCCTGGTGGTCCCAGAAATTCTGAAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PLCTGGNSKSLQ*QPGGPRNSEGK Trigger: CTTGCCTTCAGAATTTCTGGGACCACCAGGCTGCCATTGGAGAGACTTACTATTGCCCCCAGTGCAGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | AACAGCTGGTGGTCCTGGAACAGCTGGTCCTCAAAGTaGCTGCGCAGATGTTTCTCACACAAGGAAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: NSWWSWNSWSSK*LRRCFSHKEAT Trigger: TGTGGCTTCCTTGTGTGAGAAACATCTGCGCAGCCACTTTGAGGACCAGCTGTTCCAGGACCACCAGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CCA 72 bp | GCAAGGGTTCCACGCAGGCAGGGAAGTGCTTCAGTTTaGGGAACTCCTGTAGGAATTGCTCATCACTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ARVPRRQGSASV*GTPVGIAHHSC Trigger: ACAGGAGTGATGAGCAATTCCTACAGGAGTTCCCCAAACTGAAGCACTTCCCTGCCTGCGTGGAACCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS CAA 72 bp | AGAAGGATGCCCAAGTTCAACACCGAGTGTGTTTCCTaGAACAAGAACAGCTCTTCGCTGGCCGTGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RRMPKFNTECVS*NKNSSSLAVQG Trigger: CCCCTGCACGGCCAGCGAAGAGCTGTTCTTGTTCAAGGAAACACACTCGGTGTTGAACTTGGGCATCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | CATGAGAGCCAGATATTTTGTTGCCCTGTGGACCGATaGTTGCCGTCTTCTCTCCTTTCTCTGTGGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: HESQIFCCPVDR*LPSSLLSLWPL Trigger: CAGCGGCCACAGAGAAAGGAGAGAAGACGGCAATCATCGGTCCACAGGGCAACAAAATATCTGGCTCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | CTTCATCTGCAGCTGTTTAATCTCATGGAGGATCTCTaGGAAGCAGGTGTCCACCTCGTCTCGCATGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LHLQLFNLMEDL*EAGVHLVSHGL Trigger: CAGACCATGCGAGACGAGGTGGACACCTGCTTCTCAGAGATCCTCCATGAGATTAAACAGCTGCAGATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | AGAGCCAGATATTTTGTTGCCCTGTGGACCGATGATTaGCGTCTTCTCTCCTTTCTCTGTGGCCGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RARYFVALWTDD*RLLSFLCGRCF Trigger: GAAACAGCGGCCACAGAGAAAGGAGAGAAGACGGCAATCATCGGTCCACAGGGCAACAAAATATCTGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | TCACTCGTCCCTGGTGTTTCTGACTGTCAGAGGCAATaGTCAGCATCTGGTTCTCCACATTGGCCTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: SLVPGVSDCQRQ*SASGSPHWPES Trigger: AGATTCAGGCCAATGTGGAGAACCAGATGCTGATCATTGCCTCTGACAGTCAGAAACACCAGGGACGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS TCA 72 bp | AGTTTCGAGAGAAAACTCACTCGTCCCTGGTGTTTCTaGCTGTCAGAGGCAATGATCAGCATCTGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFERKLTRPWCF*LSEAMISIWFS Trigger: GGAGAACCAGATGCTGATCATTGCCTCTGACAGTCAGAAACACCAGGGACGAGTGAGTTTTCTCTCGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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| CDS GCA 72 bp | GCCTCCTCCTTCTCCACAAAATCCAAGACCTTCATCTaGAGCTGTTTAATCTCATGGAGGATCTCTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASSFSTKSKTFI*SCLISWRISEK Trigger: CTTCTCAGAGATCCTCCATGAGATTAAACAGCTGCAGATGAAGGTCTTGGATTTTGTGGAGAAGGAGGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093914.5 |
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