Pregenerated sensors for TRIM8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025034Ensembl transcript IDs: ENSMUST00000026008.9
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCCAGAGGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTaGGCTGCCTCCCAGGGCGAGCAAAGAGCTGCCATCCAGGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: CPEEPVKGGETGSGC*AASQGEQRAAIQGF Trigger: GAAGCCCTGGATGGCAGCTCTTTGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTCTGGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR TCA 90 bp | GTCACTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTaGAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: VTLFSTSDHTAQRNQ*REEKRAVGAGLPPR Trigger: CCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR TCA 90 bp | AAAGAAAACCCTCCACAATCTCTAGGTCACTCTTTTCTCCACCAGTaGTCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGAAACGGGC | + |
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Preference number: 1 (lower is better) Translates to: KENPPQSLGHSFLHQ*SHCPEEPVKGGETG Trigger: GCCCGTTTCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAGTGACCTAGAGATTGTGGAGGGTTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR TCA 90 bp | GGCTTTGAAAGATTCCACTTGGGTTTGAAGATGCCAAAGGCTGCTTaGGATGTGGCCTTGAACTTCCGGCTAGAAAGAGGGTCTATAGAA | + |
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Preference number: 1 (lower is better) Translates to: GFERFHLGLKMPKAA*DVALNFRLERGSIE Trigger: TTCTATAGACCCTCTTTCTAGCCGGAAGTTCAAGGCCACATCTCAAGCAGCCTTTGGCATCTTCAAACCCAAGTGGAATCTTTCAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR GCA 90 bp | GGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGAACTCCAGGGCTACCTaGAGCCCCTGCCAAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GTSEGRRNGQWVLGCLPGNSRAT*SPCQGP Trigger: TGGCCCTTGGCAGGGGCTGCAGGTAGCCCTGGAGTT...CCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGCCAGCCATGGGGGTGTaGAGGGAAGGGGGTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: EEPVKGGETGSGCWAASQPAMGV*REGGRI Trigger: AATCCTACCCCCTTCCCTTCACACCCCCATGGCTGG...CTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGCTACCTGCAGCCCCTaGCAAGGGCCAAGGCTACTT | + |
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Preference number: 2 (lower is better) Translates to: EEPVKGGETGSGCWAASQATCSP*QGPRLL Trigger: AAGTAGCCTTGGCCCTTGGCAGGGGCTGCAGGTAGC...CTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCACGGGCAGTGGGTGCTaGGCTGCCTCCCAGGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: GGSRLREPCADHRQKVLGTGSGC*AASQGE Trigger: CTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGT...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGAGCAAAGGAGAGAGGAGGGTaGAAAGGGCCGGTCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: SEGRRNGQWVLGCLPGRAKERGG*KGPVSE Trigger: TTCAGAGACCGGCCCTTTCCACCCTCCTCTCTCCTT...TGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCCGGGGCTCCTGGCTTTaGAAGATTCCACTTGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: GGSRLREPCADHRQKVLGRGSWL*KIPLGF Trigger: AAACCCAAGTGGAATCTTTCAAAGCCAGGAGCCCCG...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACGGGCCGGTCTCTGAATaGATAATTCCCGAGCCACCG | + |
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Preference number: 2 (lower is better) Translates to: QKSRQESGGSRLREPCADGPVSE*IIPEPP Trigger: CGGTGGCTCGGGAATTATGCATTCAGAGACCGGCCC...GTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGAGGGCGAGCAAAGAGCTaGCATCCAGGGCTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LFSPPVITLPRGTSEGRRGRAKS*HPGLLP Trigger: TGGAAGAAGCCCTGGATGGCAGCTCTTTGCTCGCCC...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTGGGATTGTGCAGTGGGTGCTGGGCTaGCTCCCAGGGCGAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: KDRCSWCLRSDIYRSGIVQWVLG*LPGRAK Trigger: CTTTGCTCGCCCTGGGAGGCAGCCCAGCACCCACTG...CACAATCCCAGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAATAAACCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTGAAACGGGCAGTGGGTaGTGGGCTGCCTCCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: FNKPKVKDRCSWCLRSDIETGSG*WAASQG Trigger: GCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTC...AATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGGTTTATTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACGAAGATGCCAAAGGCTaGTTGAGATGTGGCCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: QKSRQESGGSRLREPCADEDAKG*LRCGLE Trigger: TTCAAGGCCACATCTCAAGCAGCCTTTGGCATCTTC...GTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTGGGATTGTGGGCTTCTTCCAGCCATaGGGGTGTGAAGGGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KDRCSWCLRSDIYRSGIVGFFQP*GCEGKG Trigger: CCCCTTCCCTTCACACCCCCATGGCTGGAAGAAGCC...CACAATCCCAGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCCCTCCACAAGGGCTGTaGTCTTGTTTTTATTCATTA | + |
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Preference number: 2 (lower is better) Translates to: GGSRLREPCADHRQKVLGPPQGL*SCFYSL Trigger: TAATGAATAAAAACAAGAGCACAGCCCTTGTGGAGG...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAATAAACCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTGCCCAGAGGAACCAGTaGAGGGAGGAGAAACGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FNKPKVKDRCSWCLRSDIAQRNQ*REEKRA Trigger: TGCCCGTTTCTCCTCCCTTCACTGGTTCCTCTGGGC...AATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGGTTTATTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTGGGATTGTGTCTTTTCTCCACCAGTaGTCACACTGCCCAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KDRCSWCLRSDIYRSGIVSFLHQ*SHCPEE Trigger: TTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGA...CACAATCCCAGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR GCA 72 bp | AGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTaGCTCCCAGGGCGAGCAAAGAGCTGCCATCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SEGRRNGQWVLG*LPGRAKSCHPG Trigger: CCCTGGATGGCAGCTCTTTGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR GCA 72 bp | GAGGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTaGTGGGCTGCCTCCCAGGGCGAGCAAAGAGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: EEPVKGGETGSG*WAASQGEQRAA Trigger: GGCAGCTCTTTGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR GCA 72 bp | AGATACTGTCCCAACTCCAGGGCTACCTGCAGCCCCTaGCAAGGGCCAAGGCTACTTCCCACCGTCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: RYCPNSRATCSP*QGPRLLPTVTS Trigger: GGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCTGCAGGTAGCCCTGGAGTTGGGACAGTATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR TCA 72 bp | AAGAAAGGAGAGAGGAGGGTGGAAAGGGCCGGTCTCTaGATGCATAATTCCCGAGCCACCGGGGCTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KKGERRVERAGL*MHNSRATGAGE Trigger: CTCCCCAGCCCCGGTGGCTCGGGAATTATGCATTCAGAGACCGGCCCTTTCCACCCTCCTCTCTCCTTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR GCA 72 bp | CTTGAGTTAAGATACTGTCCCAACTCCAGGGCTACCTaGAGCCCCTGCCAAGGGCCAAGGCTACTTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: LELRYCPNSRAT*SPCQGPRLLPT Trigger: GGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCTGCAGGTAGCCCTGGAGTTGGGACAGTATCTTAACTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR TCA 72 bp | CCTCCACAATCTCTAGGTCACTCTTTTCTCCACCAGTaGTCACACTGCCCAGAGGAACCAGTGAAGGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: PPQSLGHSFLHQ*SHCPEEPVKGG Trigger: TCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAGTGACCTAGAGATTGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCTTTGAAAGATTCCACTaGGGTTTGAAGATGCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GGSRLREPCADHRQKVLGFERFH*GLKMPK Trigger: CTTTGGCATCTTCAAACCCAAGTGGAATCTTTCAAA...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR TCA 72 bp | TTTCTCAGCTTTTCTTGGACACGGGGCTCCTGGCTTTaGAAGATTCCACTTGGGTTTGAAGATGCCAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: FLSFSWTRGSWL*KIPLGFEDAKG Trigger: GCCTTTGGCATCTTCAAACCCAAGTGGAATCTTTCAAAGCCAGGAGCCCCGTGTCCAAGAAAAGCTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTACGGGGCTCCTGGCTTaGAAAGATTCCACTTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: PKVKDRCSWCLRSDIYRSTGLLA*KDSTWV Trigger: AACCCAAGTGGAATCTTTCAAAGCCAGGAGCCCCGT...AGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GAGGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGCGGGCGGTGGAGGGCTaGTGCAGGTGCGTCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: EEPVKGGETGSGCWAASQRAVEG*CRCVCT Trigger: CGTGCAGACGCACCTGCAGCAGCCCTCCACCGCCCG...CTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR TCA 90 bp | GGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGTCGAGCCAGTCTCTaGCCGCCAGGCCAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GTSEGRRNGQWVLGCLPGRRASL*PPGQEV Trigger: CACTTCCTGGCCTGGCGGTCAGAGACTGGCTCGACG...CCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | AGCCCCTGCCAAGGGCCAAGGCTACTTCCCACCGTCACCTCCTCATCCAGGAGACAGGGACCCAGGGGCTaGCCAGACTGCCCCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPCQGPRLLPTVTSSSRRQGPRG*PDCPSL Trigger: CAGCGAGGGGCAGTCTGGGCAGCCCCTGGGTCCCTG...TCTCCTGGATGAGGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | AGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGAGCATGGCACACAGCCACCTaGTCGGCCTCGCAGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SEGRRNGQWVLGCLPGRAWHTAT*SASQWY Trigger: GTACCACTGCGAGGCCGAGCAGGTGGCTGTGTGCCA...TGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | AGCCCCTGCCAAGGGCCAAGGCTACTTCCCACCGTCACCTCCTCATCCAGGAGACCAAGGTGCAGCGCCTaGGCCGCGTTCTCGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SPCQGPRLLPTVTSSSRRPRCSA*AAFSLQ Trigger: CTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGG...TCTCCTGGATGAGGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGTCTTGGCCTCCTGCATaGGCTCCCCAAGGTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GTSEGRRNGQWVLGCLPGSWPPA*APQGAA Trigger: CGCTGCACCTTGGGGAGCGCATGCAGGAGGCCAAGA...CCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGAGCATTGCGGCCGCCATACTaGGGGAGCATGGGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SEGRRNGQWVLGCLPGRALRPPY*GSMGCW Trigger: CCAGCAACCCATGCTCCCCCAGTATGGCGGCCGCAA...TGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GAGGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCAGAGCCACCAAGTaGTGCGTGGAGCTGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: EEPVKGGETGSGCWAASQGRATK*CVELQG Trigger: TCCCTGCAGCTCCACGCAGCACTTGGTGGCTCTGCC...CTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | GCAGCCCCTGCCAAGGGCCAAGGCTACTTCCCACCGTCACCTCCTCATCCAGGAAGCCCAGCAGCTTCTTaGCCTCCTGCATGCGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: AAPAKGQGYFPPSPPHPGSPAAS*PPACAP Trigger: GGGAGCGCATGCAGGAGGCCAAGAAGCTGCTGGGCT...TCCTGGATGAGGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | AGCCCCTGCCAAGGGCCAAGGCTACTTCCCACCGTCACCTCCTCATCCAGGAGACCACCAAGTGCTGCGTaGAGCTGCAGGGACCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SPCQGPRLLPTVTSSSRRPPSAA*SCRDPG Trigger: CCCTGGGTCCCTGCAGCTCCACGCAGCACTTGGTGG...TCTCCTGGATGAGGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR TCA 90 bp | GTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGAGCAACACCAGGCGCTTGTCTaGCTCGAGCTTGTACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VKGGETGSGCWAASQGEQHQALV*LELVQL Trigger: CAGCTGTACAAGCTCGAGTCAGACAAGCGCCTGGTG...TTGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCCCTCGCTGCTGGCTGTaGCCGCTGCCCCGTACTGGC | + |
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Preference number: 4 (lower is better) Translates to: GGSRLREPCADHRQKVLGPRCWL*PLPRTG Trigger: GCCAGTACGGGGCAGCGGGCACAGCCAGCAGCGAGG...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | GAGGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGTGGCCACCGTGGTTaGCCACGGAAGAGCAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: EEPVKGGETGSGCWAASQGGHRG*PRKSSN Trigger: GTTACTGCTCTTCCGTGGCCAACCACGGTGGCCACC...CTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GAGGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGATTGTAGGCCTGGTTaGACTCCGGGCAGCGCACAA | + |
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Preference number: 4 (lower is better) Translates to: EEPVKGGETGSGCWAASQDCRPG*TPGSAQ Trigger: TTGTGCGCTGCCCGGAGTGCAACCAGGCCTACAATC...CTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGAGGACCTCCACTGTCTaGCGCAAGTCTTCATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GTSEGRRNGQWVLGCLPGRTSTV*RKSSSS Trigger: GCTGGATGAAGACTTGCGGCAGACAGTGGAGGTCCT...CCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GCAGCCCCTGCCAAGGGCCAAGGCTACTTCCCACCGTCACCTCCTCATCCAGGATTGTCGAAGAGACGCTaGAGGGAGCCCAGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AAPAKGQGYFPPSPPHPGLSKRR*REPSSF Trigger: GAAGCTGCTGGGCTCCCTGCAGCGTCTCTTCGACAA...TCCTGGATGAGGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | CAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACGCTGGCTGTGCCCGCTaGCCCGTACTGGCCGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QKSRQESGGSRLREPCADAGCAR*PVLAAH Trigger: GTGGGCGGCCAGTACGGGGCAGCGGGCACAGCCAGC...GTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR TCA 90 bp | AGCCCCTGCCAAGGGCCAAGGCTACTTCCCACCGTCACCTCCTCATCCAGGAGAGGCAGATGGGGCAGATaGGCTCCTCCTCAAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SPCQGPRLLPTVTSSSRRGRWGR*APPQSS Trigger: ACTGCTTTGAGGAGGAGCTCATCTGCCCCATCTGCC...TCTCCTGGATGAGGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GCAGCCCCTGCCAAGGGCCAAGGCTACTTCCCACCGTCACCTCCTCATCCAGGATGCAGCTTTTCGTACTaGAGCCGCACCTCCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: AAPAKGQGYFPPSPPHPGCSFSY*SRTSSF Trigger: GAAGGAGGAGGTGCGGCTGCAGTACGAAAAGCTGCA...TCCTGGATGAGGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGTCATCCAGCAGCTGGTaGAGCTTTTCGTACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTSEGRRNGQWVLGCLPGSSSSW*SFSYCS Trigger: GCTGCAGTACGAAAAGCTGCACCAGCTGCTGGATGA...CCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCGGCTGGTGGCCACCGTaGTTGGCCACGGAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGSRLREPCADHRQKVLGGWWPP*LATEEQ Trigger: CTGCTCTTCCGTGGCCAACCACGGTGGCCACCAGCC...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR TCA 90 bp | GTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGAGCAAGCTCCTGCTGCTTCATaGGCATCTTCCGTATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKGGETGSGCWAASQGEQAPAAS*ASSVSH Trigger: ATGAGATACGGAAGATGCTCATGAAGCAGCAGGAGC...TTGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCAGGCCAGGAAGTGACTaGGGGACGGAGGGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSRLREPCADHRQKVLGRPGSD*GTEGVG Trigger: ACCCACACCCTCCGTCCCTCAGTCACTTCCTGGCCT...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGAATGCGCTCCCCAAGGTaGAGCGCCTGCGCCGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSPPVITLPRGTSEGRRMRSPR*SACAAF Trigger: GAACGCGGCGCAGGCGCTGCACCTTGGGGAGCGCAT...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCCTGCCAAGGGCCAAGGCTACTTCCCACCGTCACCTCCTCATCCAGGAAGCATCTTCCGCAACTaGTTCTCCTTCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AAPAKGQGYFPPSPPHPGSIFRN*FSFLAT Trigger: GGTGGCCAAGAAGGAGAAGCAGTTGCGGAAGATGCT...TCCTGGATGAGGAGGTGACGGTGGGAAGTAGCCTTGGCCCTTGGCAGGGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGAGCATCGAGCTTGTACAGCTaGTCCTCAATGTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEGRRNGQWVLGCLPGRASSLYS*SSMSCS Trigger: AGAGCAGGACATTGAGGACCAGCTGTACAAGCTCGA...TGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GAGGACAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGGGGGAGAAAGGCTGCTaGCCGTGCAGGTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDRNQDRRVEAADLESPVGEKGC*PCRSGS Trigger: GGACCCAGACCTGCACGGGCAGCAGCCTTTCTCCCC...CACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTGTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CCA 90 bp | GGAACCAGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGTTGTCACATAGTGTTTaGTGGACGGCTGCCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: GTSEGRRNGQWVLGCLPGLSHSV*WTAAHT Trigger: TGTATGGGCAGCCGTCCACCAAACACTATGTGACAA...CCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GAGGACAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGGAACACGCAGTGCAGTaGCGTCGGCGGCTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EDRNQDRRVEAADLESPVEHAVQ*RRRLLH Trigger: GTGGAGAAGCCGCCGACGGCACTGCACTGCGTGTTC...CACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGACGACAGAACACGCAGTaGAGTGCCGTCGGCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSPPVITLPRGTSEGRRRQNTQ*SAVGGF Trigger: GAAGCCGCCGACGGCACTGCACTGCGTGTTCTGTCG...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGACAAGGCCACTGTCCTTaGCCCAAGCCTCGCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSPPVITLPRGTSEGRRQGHCP*PKPRRC Trigger: GCATCGGCGAGGCTTGGGCCAAGGACAGTGGCCTTG...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCTCGAGTGTACTGGCTaGGTACCGCCTGGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKSRQESGGSRLREPCADLECTG*VPPGRA Trigger: GGCTCTGCCAGGCGGTACCCAGCCAGTACACTCGAG...GTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | CAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCCCAAGCCTCGCCGATaGAGCCCCGGCAGAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QKSRQESGGSRLREPCADPKPRR*SPGRSY Trigger: ATAACTTCTGCCGGGGCTGCATCGGCGAGGCTTGGG...GTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCAACAGACGAGAATCTTaGGGCCGCCATACTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGSRLREPCADHRQKVLGNRRES*GRHTGG Trigger: TCCCCCAGTATGGCGGCCGCAAGATTCTCGTCTGTT...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | GAGGACAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGCATACTGGGGGAGCATaGGTTGCTGGGTGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDRNQDRRVEAADLESPVHTGGA*VAGWWS Trigger: GCTCCACCACCCAGCAACCCATGCTCCCCCAGTATG...CACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGACCACGTGCAGGGCGTTaGACTTCTCCACGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSPPVITLPRGTSEGRRPRAGR*TSPRCW Trigger: CCAACATCGTGGAGAAGTTCAACGCCCTGCACGTGG...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCCACTGACCTCCACAAGGGCTGTGCTCTTGTTTTTATTCATTATTTCCGCCAGGCCAGGAAGTaGCTGAGGGACGGAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPTDLHKGCALVFIHYFRQARK*LRDGGC Trigger: ACACCCTCCGTCCCTCAGTCACTTCCTGGCCTGGCG...GAAATAATGAATAAAAACAAGAGCACAGCCCTTGTGGAGGTCAGTGGGGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCCCACTGACCTCCACAAGGGCTGTGCTCTTGTTTTTATTCATTATTTCAGAGCCACCAAGTGCTaGGTGGAGCTGCAGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPTDLHKGCALVFIHYFRATKC*VELQGP Trigger: GGGTCCCTGCAGCTCCACGCAGCACTTGGTGGCTCT...GAAATAATGAATAAAAACAAGAGCACAGCCCTTGTGGAGGTCAGTGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGACTGCCCGTGCAGGTCTaGGTCCTGTCCATTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFSPPVITLPRGTSEGRRLPVQV*VLSIRI Trigger: AATCCTAATGGACAGGACCCAGACCTGCACGGGCAG...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR TCA 90 bp | TTCAGTGTGTGCTCTAGACAGGAAGTCCATGATTCAGATAAAGTGCTCCCTGTAAGGTGCGTCTGCACGTaGGACTGGCAGCAGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVCSRQEVHDSDKVLPVRCVCT*DWQQGA Trigger: GGCTCCCTGCTGCCAGTCTCACGTGCAGACGCACCT...TACAGGGAGCACTTTATCTGAATCATGGACTTCCTGTCTAGAGCACACACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGAAGCTTGGAGTTCAGGTaGCCGATCTTAGGGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFSPPVITLPRGTSEGRRSLEFR*PILGGE Trigger: TTCTCCCCCTAAGATCGGCCACCTGAACTCCAAGCT...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | TTCAGTGTGTGCTCTAGACAGGAAGTCCATGATTCAGATAAAGTGCTCCCTGTAACTGTCCAGGGGAAGTaGCCGGATCGGGGGTACGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVCSRQEVHDSDKVLPVTVQGK*PDRGYG Trigger: GCCGTACCCCCGATCCGGCCACTTCCCCTGGACAGT...TACAGGGAGCACTTTATCTGAATCATGGACTTCCTGTCTAGAGCACACACTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | AAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTGGGATTGTGGCGCCGCGTTCTCGCTaGAGAACTTGGCTTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDRCSWCLRSDIYRSGIVAPRSR*RTWLAP Trigger: AGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGC...CACAATCCCAGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTTGGCTGGGTACCGCCTaGCAGAGCCACCAAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKVKDRCSWCLRSDIYRSWLGTA*QSHQVL Trigger: CAGCACTTGGTGGCTCTGCCAGGCGGTACCCAGCCA...AGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | TTCAATAAACCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTCGGGGGTACGGCTGGTaGCCACCGTGGTTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: FNKPKVKDRCSWCLRSDIRGYGW*PPWLAT Trigger: CGTGGCCAACCACGGTGGCCACCAGCCGTACCCCCG...AATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGGTTTATTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | AAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTGGGATTGTGGGCGGCTTCTCCACGTaGAGGGCGTTGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KDRCSWCLRSDIYRSGIVGGFST*RALNFS Trigger: GGAGAAGTTCAACGCCCTGCACGTGGAGAAGCCGCC...CACAATCCCAGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | TTCAGTGTGTGCTCTAGACAGGAAGTCCATGATTCAGATAAAGTGCTCCCTGTAAAAGGCTGCTGCCCGTaGAGGTCTGGGTCCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVCSRQEVHDSDKVLPVKGCCP*RSGSCP Trigger: TGGACAGGACCCAGACCTGCACGGGCAGCAGCCTTT...TACAGGGAGCACTTTATCTGAATCATGGACTTCCTGTCTAGAGCACACACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | AAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTGGGATTGTGGGGAAGGCTGTCGAGTaGTTGCGCTTTTCGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KDRCSWCLRSDIYRSGIVGKAVE*LRFSAP Trigger: TGGGGCCGAAAAGCGCAAGCACTCGACAGCCTTCCC...CACAATCCCAGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | TTCAATAAACCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTAGGGGCTGCCCAGACTaGCCCTCGCTGCTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNKPKVKDRCSWCLRSDIRGCPD*PSLLAV Trigger: CACAGCCAGCAGCGAGGGGCAGTCTGGGCAGCCCCT...AATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGGTTTATTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCACTGACCTCCACAAGGGCTGTGCTCTTGTTTTTATTCATTATTTCTCTCGCTGCAGAACTTaGCTTGCGCCTTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSPTDLHKGCALVFIHYFSRCRT*LAPCPG Trigger: TCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGA...GAAATAATGAATAAAAACAAGAGCACAGCCCTTGTGGAGGTCAGTGGGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | AAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTGGGATTGTGTGGTCCTCAATGTCCTaGTCTCTCTCCTCCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KDRCSWCLRSDIYRSGIVWSSMS*SLSSSR Trigger: GCGGCTGGAGGAGAGAGAGCAGGACATTGAGGACCA...CACAATCCCAGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | TTCAGTGTGTGCTCTAGACAGGAAGTCCATGATTCAGATAAAGTGCTCCCTGTATGTTTGCATGGCAGCTaGACCGGTTCCACGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: FSVCSRQEVHDSDKVLPVCLHGS*TGSTKT Trigger: CGTTTTCGTGGAACCGGTGCAGCTGCCATGCAAACA...TACAGGGAGCACTTTATCTGAATCATGGACTTCCTGTCTAGAGCACACACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CCA 90 bp | AAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTACAGGTCTGGGATTGTGTCACATAGTGTTTGGTaGACGGCTGCCCATACACCC | + |
|
Preference number: 4 (lower is better) Translates to: KDRCSWCLRSDIYRSGIVSHSVW*TAAHTP Trigger: GGGTGTATGGGCAGCCGTCCACCAAACACTATGTGA...CACAATCCCAGACCTGTAAATATCACTTCTCAGACACCAGCTACATCTGTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR TCA 90 bp | TTCAATAAACCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTCTCCACGATGTTGGTaGGCTTCAGGTTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FNKPKVKDRCSWCLRSDISPRCW*ASGSSP Trigger: TGGAGAAGAACCTGAAGCTCACCAACATCGTGGAGA...AATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGGTTTATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR GCA 90 bp | TTCAATAAACCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTGGCAGAAGTTATGTTTaGATGGCAGCTGCACCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FNKPKVKDRCSWCLRSDIGRSYV*MAAAPV Trigger: AACCGGTGCAGCTGCCATGCAAACATAACTTCTGCC...AATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGGTTTATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 90 bp | AGGCCCGCACGTCGTCCGCCTCCACCAGGAGGTGCCCGCGGGCGGTaGAGGGCTGCTGCAGGTGCGTCTGCACGTGAGACTGGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPARRPPPPGGARGR*RAAAGASARETGSR Trigger: CCTGCTGCCAGTCTCACGTGCAGACGCACCTGCAGCAGCCCTCCACCGCCCGCGGGCACCTCCTGGTGGAGGCGGACGACGTGCGGGCCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS TCA 90 bp | AGGTGCCCGCGGGCGGTGGAGGGCTGCTGCAGGTGCGTCTGCACGTaGGACTGGCAGCAGGGAGCCTCGCAGCGCAGGCAGACCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RCPRAVEGCCRCVCT*DWQQGASQRRQTFC Trigger: ACAGAAGGTCTGCCTGCGCTGCGAGGCTCCCTGCTGCCAGTCTCACGTGCAGACGCACCTGCAGCAGCCCTCCACCGCCCGCGGGCACCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS TCA 90 bp | GCTGCTGGCTGTGCCCGCTGCCCCGTACTGGCCGCCCACTGGGCCTaGCGAAGTCTCCAGGAAGCTAGCCTCAGGGAAGGCTGTCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAGCARCPVLAAHWA*RSLQEASLREGCRV Trigger: CACTCGACAGCCTTCCCTGAGGCTAGCTTCCTGGAGACTTCGTCAGGCCCAGTGGGCGGCCAGTACGGGGCAGCGGGCACAGCCAGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 90 bp | CCTGCATGCGCTCCCCAAGGTGCAGCGCCTGCGCCGCGTTCTCGCTaGAGAACTTGGCTTGCGCCTTGTCCAGGACCTCCACTGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PACAPQGAAPAPRSR*RTWLAPCPGPPLSA Trigger: GGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGGGGAGCGCATGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS CCA 90 bp | CCTCTGTCTTGTCGAAGAGACGCTGCAGGGAGCCCAGCAGCTTCTTaGCCTCCTGCATGCGCTCCCCAAGGTGCAGCGCCTGCGCCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PLSCRRDAAGSPAAS*PPACAPQGAAPAPR Trigger: ACGCGGCGCAGGCGCTGCACCTTGGGGAGCGCATGCAGGAGGCCAAGAAGCTGCTGGGCTCCCTGCAGCGTCTCTTCGACAAGACAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 90 bp | AGCAGCTTCTTGGCCTCCTGCATGCGCTCCCCAAGGTGCAGCGCCTaGGCCGCGTTCTCGCTGCAGAACTTGGCTTGCGCCTTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFLASCMRSPRCSA*AAFSLQNLACALSR Trigger: CCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGGGGAGCGCATGCAGGAGGCCAAGAAGCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS CCA 90 bp | GGAAGTGGGTGTGAATACTCCTGTGAGGGCACTGTCCAGGGGAAGTaGCCGGATCGGGGGTACGGCTGGTGGCCACCGTGGTTGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GSGCEYSCEGTVQGK*PDRGYGWWPPWLAT Trigger: CGTGGCCAACCACGGTGGCCACCAGCCGTACCCCCGATCCGGCCACTTCCCCTGGACAGTGCCCTCACAGGAGTATTCACACCCACTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 90 bp | CCGGGCAGCGCACAAGGCCACTGTCCTTGGCCCAAGCCTCGCCGATaGAGCCCCGGCAGAAGTTATGTTTGCATGGCAGCTGCACCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSAQGHCPWPKPRR*SPGRSYVCMAAAPV Trigger: AACCGGTGCAGCTGCCATGCAAACATAACTTCTGCCGGGGCTGCATCGGCGAGGCTTGGGCCAAGGACAGTGGCCTTGTGCGCTGCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS CCA 90 bp | GCTCCCCAAGGTGCAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTTaGCTTGCGCCTTGTCCAGGACCTCCACTGTCTGCCGCAAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: APQGAAPAPRSRCRT*LAPCPGPPLSAASL Trigger: AAGACTTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CAA 90 bp | GTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGAGCAAGCTGCAGAACTTGGCTaGCGCCTTGTCCAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VKGGETGSGCWAASQGEQAAELG*RLVQDL Trigger: GAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGC...TTGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CAA 90 bp | AGTGAAGGGAGGAGAAACGGGCAGTGGGTGCTGGGCTGCCTCCCAGGGCGAGCAGAACAGACGAGAATCTaGCGGCCGCCATACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SEGRRNGQWVLGCLPGRAEQTRI*RPPYWG Trigger: CCCCCAGTATGGCGGCCGCAAGATTCTCGTCTGTTC...TGCTCGCCCTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 90 bp | CCAAGGTGCAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTTGGCTTaGGCCTTGTCCAGGACCTCCACTGTCTGCCGCAAGTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PRCSACAAFSLQNLA*ALSRTSTVCRKSSS Trigger: GGATGAAGACTTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 90 bp | TGTAGGCCTGGTTGCACTCCGGGCAGCGCACAAGGCCACTGTCCTTaGCCCAAGCCTCGCCGATGCAGCCCCGGCAGAAGTTATGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CRPGCTPGSAQGHCP*PKPRRCSPGRSYVC Trigger: GCAAACATAACTTCTGCCGGGGCTGCATCGGCGAGGCTTGGGCCAAGGACAGTGGCCTTGTGCGCTGCCCGGAGTGCAACCAGGCCTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 90 bp | CCTTGGCCCAAGCCTCGCCGATGCAGCCCCGGCAGAAGTTATGTTTaGATGGCAGCTGCACCGGTTCCACGAAAACGTGCAGGCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PWPKPRRCSPGRSYV*MAAAPVPRKRAGRW Trigger: CCATCTGCCTGCACGTTTTCGTGGAACCGGTGCAGCTGCCATGCAAACATAACTTCTGCCGGGGCTGCATCGGCGAGGCTTGGGCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 90 bp | CGGCGACAGAACACGCAGTGCAGTGCCGTCGGCGGCTTCTCCACGTaGAGGGCGTTGAACTTCTCCACGATGTTGGTGAGCTTCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRQNTQCSAVGGFST*RALNFSTMLVSFRF Trigger: GAACCTGAAGCTCACCAACATCGTGGAGAAGTTCAACGCCCTGCACGTGGAGAAGCCGCCGACGGCACTGCACTGCGTGTTCTGTCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 90 bp | AGGGGAAGTGGCCGGATCGGGGGTACGGCTGGTGGCCACCGTGGTTaGCCACGGAAGAGCAGTAACAGTTGTCCACAGAACAGACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGSGRIGGTAGGHRG*PRKSSNSCPQNRRE Trigger: TTCTCGTCTGTTCTGTGGACAACTGTTACTGCTCTTCCGTGGCCAACCACGGTGGCCACCAGCCGTACCCCCGATCCGGCCACTTCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGCAGACTTAGAGAGCCCTGTGCAGACCACCGTCAAAAGGTTCTAGGCGAGCCCAGCAGCTTCTaGGCCTCCTGCATGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSRLREPCADHRQKVLGEPSSF*ASCMRS Trigger: GGAGCGCATGCAGGAGGCCAAGAAGCTGCTGGGCTC...GCCTAGAACCTTTTGACGGTGGTCTGCACAGGGCTCTCTAAGTCTGCTGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 90 bp | GTCTGCCGCAAGTCTTCATCCAGCAGCTGGTGCAGCTTTTCGTACTaGAGCCGCACCTCCTCCTTCAGCTGGCTCACTTTCTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VCRKSSSSSWCSFSY*SRTSSFSWLTFSST Trigger: GGTGGAGGAGAAAGTGAGCCAGCTGAAGGAGGAGGTGCGGCTGCAGTACGAAAAGCTGCACCAGCTGCTGGATGAAGACTTGCGGCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 90 bp | CCTGACGAAGTCTCCAGGAAGCTAGCCTCAGGGAAGGCTGTCGAGTaGTTGCGCTTTTCGGCCCCAGAGCTGTTCACACCACAAGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PDEVSRKLASGKAVE*LRFSAPELFTPQGY Trigger: GTACCCTTGTGGTGTGAACAGCTCTGGGGCCGAAAAGCGCAAGCACTCGACAGCCTTCCCTGAGGCTAGCTTCCTGGAGACTTCGTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 90 bp | CCACGGAAGAGCAGTAACAGTTGTCCACAGAACAGACGAGAATCTTaGGGCCGCCATACTGGGGGAGCATGGGTTGCTGGGTGGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRKSSNSCPQNRRES*GRHTGGAWVAGWWS Trigger: GCTCCACCACCCAGCAACCCATGCTCCCCCAGTATGGCGGCCGCAAGATTCTCGTCTGTTCTGTGGACAACTGTTACTGCTCTTCCGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 90 bp | TTGTCCAGGACCTCCACTGTCTGCCGCAAGTCTTCATCCAGCAGCTaGTGCAGCTTTTCGTACTGCAGCCGCACCTCCTCCTTCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSRTSTVCRKSSSSS*CSFSYCSRTSSFSW Trigger: CCAGCTGAAGGAGGAGGTGCGGCTGCAGTACGAAAAGCTGCACCAGCTGCTGGATGAAGACTTGCGGCAGACAGTGGAGGTCCTGGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 90 bp | TCGCTGCAGAACTTGGCTTGCGCCTTGTCCAGGACCTCCACTGTCTaGCGCAAGTCTTCATCCAGCAGCTGGTGCAGCTTTTCGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLQNLACALSRTSTV*RKSSSSSWCSFSYC Trigger: GCAGTACGAAAAGCTGCACCAGCTGCTGGATGAAGACTTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CAA 90 bp | GAGGACAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGAACTTGGCTTGCGCCTaGTCCAGGACCTCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EDRNQDRRVEAADLESPVNLACA*SRTSTV Trigger: GACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTT...CACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGTTCTCGCTGCAGAACTaGGCTTGCGCCTTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EDRNQDRRVEAADLESPVFSLQN*ACALSR Trigger: CCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAA...CACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CAA 90 bp | CCCTCCCCCACTGACCTCCACAAGGGCTGTGCTCTTGTTTTTATTCATTATTTCACAAGGCCACTGTCCTaGGCCCAAGCCTCGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSPTDLHKGCALVFIHYFTRPLS*AQASPM Trigger: CATCGGCGAGGCTTGGGCCAAGGACAGTGGCCTTGT...GAAATAATGAATAAAAACAAGAGCACAGCCCTTGTGGAGGTCAGTGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGATCCACGTGCAGGGCGTaGAACTTCTCCACGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFSPPVITLPRGTSEGRRSTCRA*NFSTML Trigger: CAACATCGTGGAGAAGTTCAACGCCCTGCACGTGGA...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CAA 90 bp | CTCTTTTCTCCACCAGTGATCACACTGCCCAGAGGAACCAGTGAAGGGAGGAGAAACTGCTTCTCCTTCTaGGCCACCTCGTTCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LFSPPVITLPRGTSEGRRNCFSF*ATSFRN Trigger: GTTCCTGAACGAGGTGGCCAAGAAGGAGAAGCAGTT...TCTCCTCCCTTCACTGGTTCCTCTGGGCAGTGTGATCACTGGTGGAGAAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CAA 90 bp | GAGGACAGAAATCAAGACAGGAGAGTGGAGGCAGCAGACTTAGAGAGCCCTGTGAACTTCTCCACGATGTaGGTGAGCTTCAGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EDRNQDRRVEAADLESPVNFSTM*VSFRFF Trigger: GAAGAACCTGAAGCTCACCAACATCGTGGAGAAGTT...CACAGGGCTCTCTAAGTCTGCTGCCTCCACTCTCCTGTCTTGATTTCTGTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCACTGACCTCCACAAGGGCTGTGCTCTTGTTTTTATTCATTATTTCTCGTTCAGGAACAGCTaGGAGTTCAGGTGGCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSPTDLHKGCALVFIHYFSFRNS*EFRWPI Trigger: GATCGGCCACCTGAACTCCAAGCTGTTCCTGAACGA...GAAATAATGAATAAAAACAAGAGCACAGCCCTTGTGGAGGTCAGTGGGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS-3UTR CAA 90 bp | TTCAGTGTGTGCTCTAGACAGGAAGTCCATGATTCAGATAAAGTGCTCCCTGTATCCTCCACCAGGCGCTaGTCTGACTCGAGCTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FSVCSRQEVHDSDKVLPVSSTRR*SDSSLY Trigger: GTACAAGCTCGAGTCAGACAAGCGCCTGGTGGAGGA...TACAGGGAGCACTTTATCTGAATCATGGACTTCCTGTCTAGAGCACACACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGTGTGCTCTAGACAGGAAGTCCATGATTCAGATAAAGTGCTCCCTGTAAGGATTTTCACAGACTaGGTGTTCTTCATGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FSVCSRQEVHDSDKVLPVRIFTD*VFFMKP Trigger: CGGCTTCATGAAGAACACCAAGTCTGTGAAAATCCT...TACAGGGAGCACTTTATCTGAATCATGGACTTCCTGTCTAGAGCACACACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS-3UTR CAA 90 bp | TTCAATAAACCAAAGGTGAAGGACAGATGTAGCTGGTGTCTGAGAAGTGATATTTTGTCTGACTCGAGCTaGTACAGCTGGTCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FNKPKVKDRCSWCLRSDILSDSS*YSWSSM Trigger: CATTGAGGACCAGCTGTACAAGCTCGAGTCAGACAA...AATATCACTTCTCAGACACCAGCTACATCTGTCCTTCACCTTTGGTTTATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS TCA 72 bp | CGGGCGGTGGAGGGCTGCTGCAGGTGCGTCTGCACGTaGGACTGGCAGCAGGGAGCCTCGCAGCGCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAVEGCCRCVCT*DWQQGASQRRQ Trigger: CTGCCTGCGCTGCGAGGCTCCCTGCTGCCAGTCTCACGTGCAGACGCACCTGCAGCAGCCCTCCACCGCCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 72 bp | CGTCGTCCGCCTCCACCAGGAGGTGCCCGCGGGCGGTaGAGGGCTGCTGCAGGTGCGTCTGCACGTGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: RRPPPPGGARGR*RAAAGASARET Trigger: AGTCTCACGTGCAGACGCACCTGCAGCAGCCCTCCACCGCCCGCGGGCACCTCCTGGTGGAGGCGGACGACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS TCA 72 bp | TGTGCCCGCTGCCCCGTACTGGCCGCCCACTGGGCCTaGCGAAGTCTCCAGGAAGCTAGCCTCAGGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CARCPVLAAHWA*RSLQEASLREG Trigger: GCCTTCCCTGAGGCTAGCTTCCTGGAGACTTCGTCAGGCCCAGTGGGCGGCCAGTACGGGGCAGCGGGCACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 72 bp | TTGGCCTCCTGCATGCGCTCCCCAAGGTGCAGCGCCTaGGCCGCGTTCTCGCTGCAGAACTTGGCTTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LASCMRSPRCSA*AAFSLQNLACA Trigger: GGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGGGGAGCGCATGCAGGAGGCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 72 bp | GGTTGCACTCCGGGCAGCGCACAAGGCCACTGTCCTTaGCCCAAGCCTCGCCGATGCAGCCCCGGCAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCTPGSAQGHCP*PKPRRCSPGRS Trigger: ACTTCTGCCGGGGCTGCATCGGCGAGGCTTGGGCCAAGGACAGTGGCCTTGTGCGCTGCCCGGAGTGCAACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | TGGTTGCACTCCGGGCAGCGCACAAGGCCACTGTCCTaGGCCCAAGCCTCGCCGATGCAGCCCCGGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WLHSGQRTRPLS*AQASPMQPRQK Trigger: CTTCTGCCGGGGCTGCATCGGCGAGGCTTGGGCCAAGGACAGTGGCCTTGTGCGCTGCCCGGAGTGCAACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 90 bp | TCCTCTGTCTTGTCGAAGAGACGCTGCAGGGAGCCCAGCAGCTTCTaGGCCTCCTGCATGCGCTCCCCAAGGTGCAGCGCCTGCGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSVLSKRRCREPSSF*ASCMRSPRCSACAA Trigger: CGCGGCGCAGGCGCTGCACCTTGGGGAGCGCATGCAGGAGGCCAAGAAGCTGCTGGGCTCCCTGCAGCGTCTCTTCGACAAGACAGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 72 bp | GCTCCCCAAGGTGCAGCGCCTGCGCCGCGTTCTCGCTaGAGAACTTGGCTTGCGCCTTGTCCAGGACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: APQGAAPAPRSR*RTWLAPCPGPP Trigger: TGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 72 bp | GGTGCAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTTaGCTTGCGCCTTGTCCAGGACCTCCACTGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GAAPAPRSRCRT*LAPCPGPPLSA Trigger: GGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 90 bp | CGCTCCCCAAGGTGCAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTaGGCTTGCGCCTTGTCCAGGACCTCCACTGTCTGCCGCAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSPRCSACAAFSLQN*ACALSRTSTVCRKS Trigger: AGACTTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGGGGAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 72 bp | AGCAGCTTCTTGGCCTCCTGCATGCGCTCCCCAAGGTaGAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSFLASCMRSPR*SACAAFSLQNL Trigger: CAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGGGGAGCGCATGCAGGAGGCCAAGAAGCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 72 bp | TGTCGAAGAGACGCTGCAGGGAGCCCAGCAGCTTCTTaGCCTCCTGCATGCGCTCCCCAAGGTGCAGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRRDAAGSPAAS*PPACAPQGAAP Trigger: AGGCGCTGCACCTTGGGGAGCGCATGCAGGAGGCCAAGAAGCTGCTGGGCTCCCTGCAGCGTCTCTTCGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 72 bp | GAACACGGGACTCGAGTGTACTGGCTGGGTACCGCCTaGCAGAGCCACCAAGTGCTGCGTGGAGCTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EHGTRVYWLGTA*QSHQVLRGAAG Trigger: CCCTGCAGCTCCACGCAGCACTTGGTGGCTCTGCCAGGCGGTACCCAGCCAGTACACTCGAGTCCCGTGTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 72 bp | TGTGAATACTCCTGTGAGGGCACTGTCCAGGGGAAGTaGCCGGATCGGGGGTACGGCTGGTGGCCACCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CEYSCEGTVQGK*PDRGYGWWPPW Trigger: CCACGGTGGCCACCAGCCGTACCCCCGATCCGGCCACTTCCCCTGGACAGTGCCCTCACAGGAGTATTCACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | CAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTTGGCTaGCGCCTTGTCCAGGACCTCCACTGTCTGCCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QRLRRVLAAELG*RLVQDLHCLPQ Trigger: TTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | AGGTGCAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTaGGCTTGCGCCTTGTCCAGGACCTCCACTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RCSACAAFSLQN*ACALSRTSTVC Trigger: GCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 72 bp | GGCCGGATCGGGGGTACGGCTGGTGGCCACCGTGGTTaGCCACGGAAGAGCAGTAACAGTTGTCCACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRIGGTAGGHRG*PRKSSNSCPQN Trigger: GTTCTGTGGACAACTGTTACTGCTCTTCCGTGGCCAACCACGGTGGCCACCAGCCGTACCCCCGATCCGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 90 bp | TGCAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTTGGCTTGCGCCTaGTCCAGGACCTCCACTGTCTGCCGCAAGTCTTCATCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CSACAAFSLQNLACA*SRTSTVCRKSSSSS Trigger: GCTGCTGGATGAAGACTTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCA 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 90 bp | CCCAAGGTGCAGCGCCTGCGCCGCGTTCTCGCTGCAGAACTTGGCTaGCGCCTTGTCCAGGACCTCCACTGTCTGCCGCAAGTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PKVQRLRRVLAAELG*RLVQDLHCLPQVFI Trigger: GATGAAGACTTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCAGGCGCTGCACCTTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 72 bp | GCACAAGGCCACTGTCCTTGGCCCAAGCCTCGCCGATaGAGCCCCGGCAGAAGTTATGTTTGCATGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AQGHCPWPKPRR*SPGRSYVCMAA Trigger: AGCTGCCATGCAAACATAACTTCTGCCGGGGCTGCATCGGCGAGGCTTGGGCCAAGGACAGTGGCCTTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 72 bp | AACACGCAGTGCAGTGCCGTCGGCGGCTTCTCCACGTaGAGGGCGTTGAACTTCTCCACGATGTTGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NTQCSAVGGFST*RALNFSTMLVS Trigger: GCTCACCAACATCGTGGAGAAGTTCAACGCCCTGCACGTGGAGAAGCCGCCGACGGCACTGCACTGCGTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS CAA 72 bp | TGCGCCGCGTTCTCGCTGCAGAACTTGGCTTGCGCCTaGTCCAGGACCTCCACTGTCTGCCGCAAGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CAAFSLQNLACA*SRTSTVCRKSS Trigger: TGAAGACTTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTTCTGCAGCGAGAACGCGGCGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS GCA 72 bp | GTCTCCAGGAAGCTAGCCTCAGGGAAGGCTGTCGAGTaGTTGCGCTTTTCGGCCCCAGAGCTGTTCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: VSRKLASGKAVE*LRFSAPELFTP Trigger: TGGTGTGAACAGCTCTGGGGCCGAAAAGCGCAAGCACTCGACAGCCTTCCCTGAGGCTAGCTTCCTGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS CCA 72 bp | CTCGCCGATGCAGCCCCGGCAGAAGTTATGTTTGCATaGCAGCTGCACCGGTTCCACGAAAACGTGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LADAAPAEVMFA*QLHRFHENVQA Trigger: TGCCTGCACGTTTTCGTGGAACCGGTGCAGCTGCCATGCAAACATAACTTCTGCCGGGGCTGCATCGGCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS CCA 72 bp | ACCTCCACTGTCTGCCGCAAGTCTTCATCCAGCAGCTaGTGCAGCTTTTCGTACTGCAGCCGCACCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSTVCRKSSSSS*CSFSYCSRTSS Trigger: GGAGGAGGTGCGGCTGCAGTACGAAAAGCTGCACCAGCTGCTGGATGAAGACTTGCGGCAGACAGTGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
||
| CDS CCA 72 bp | TTGGCCACCTCGTTCAGGAACAGCTTGGAGTTCAGGTaGCCGATCTTAGGGGGAGAAAGGCTGCTGCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LATSFRNSLEFR*PILGGERLLPV Trigger: CACGGGCAGCAGCCTTTCTCCCCCTAAGATCGGCCACCTGAACTCCAAGCTGTTCCTGAACGAGGTGGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | TGCAGTGCCGTCGGCGGCTTCTCCACGTGCAGGGCGTaGAACTTCTCCACGATGTTGGTGAGCTTCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: CSAVGGFSTCRA*NFSTMLVSFRF Trigger: GAACCTGAAGCTCACCAACATCGTGGAGAAGTTCAACGCCCTGCACGTGGAGAAGCCGCCGACGGCACTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 90 bp | AACACGCAGTGCAGTGCCGTCGGCGGCTTCTCCACGTGCAGGGCGTaGAACTTCTCCACGATGTTGGTGAGCTTCAGGTTCTTCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: NTQCSAVGGFSTCRA*NFSTMLVSFRFFSR Trigger: CCTGGAGAAGAACCTGAAGCTCACCAACATCGTGGAGAAGTTCAACGCCCTGCACGTGGAGAAGCCGCCGACGGCACTGCACTGCGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 90 bp | GACGAAGTCTCCAGGAAGCTAGCCTCAGGGAAGGCTGTCGAGTGCTaGCGCTTTTCGGCCCCAGAGCTGTTCACACCACAAGGGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: DEVSRKLASGKAVEC*RFSAPELFTPQGYR Trigger: CCTGTACCCTTGTGGTGTGAACAGCTCTGGGGCCGAAAAGCGCAAGCACTCGACAGCCTTCCCTGAGGCTAGCTTCCTGGAGACTTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 72 bp | AAGCCTCGCCGATGCAGCCCCGGCAGAAGTTATGTTTaGATGGCAGCTGCACCGGTTCCACGAAAACGTGCA | + |
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Preference number: 6 (lower is better) Translates to: KPRRCSPGRSYV*MAAAPVPRKRA Trigger: TGCACGTTTTCGTGGAACCGGTGCAGCTGCCATGCAAACATAACTTCTGCCGGGGCTGCATCGGCGAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CCA 72 bp | AGCTTTTCGTACTGCAGCCGCACCTCCTCCTTCAGCTaGCTCACTTTCTCCTCCACCAGGCGCTTGTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SFSYCSRTSSFS*LTFSSTRRLSD Trigger: GTCAGACAAGCGCCTGGTGGAGGAGAAAGTGAGCCAGCTGAAGGAGGAGGTGCGGCTGCAGTACGAAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | TCCAGGAAGCTAGCCTCAGGGAAGGCTGTCGAGTGCTaGCGCTTTTCGGCCCCAGAGCTGTTCACACCACAA | + |
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Preference number: 6 (lower is better) Translates to: SRKLASGKAVEC*RFSAPELFTPQ Trigger: TTGTGGTGTGAACAGCTCTGGGGCCGAAAAGCGCAAGCACTCGACAGCCTTCCCTGAGGCTAGCTTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS TCA 72 bp | CAGCTGGCTCACTTTCTCCTCCACCAGGCGCTTGTCTaGCTCGAGCTTGTACAGCTGGTCCTCAATGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QLAHFLLHQALV*LELVQLVLNVL Trigger: CAGGACATTGAGGACCAGCTGTACAAGCTCGAGTCAGACAAGCGCCTGGTGGAGGAGAAAGTGAGCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 72 bp | AACTTGGCTTGCGCCTTGTCCAGGACCTCCACTGTCTaGCGCAAGTCTTCATCCAGCAGCTGGTGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: NLACALSRTSTV*RKSSSSSWCSF Trigger: AAAGCTGCACCAGCTGCTGGATGAAGACTTGCGGCAGACAGTGGAGGTCCTGGACAAGGCGCAAGCCAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | TTCTCCACGTGCAGGGCGTTGAACTTCTCCACGATGTaGGTGAGCTTCAGGTTCTTCTCCAGGCCCGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSTCRALNFSTM*VSFRFFSRPGF Trigger: GAAGCCGGGCCTGGAGAAGAACCTGAAGCTCACCAACATCGTGGAGAAGTTCAACGCCCTGCACGTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | GACTTGGTGTTCTTCATGAAGCCGACGTCCTCTGTCTaGTCGAAGAGACGCTGCAGGGAGCCCAGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DLVFFMKPTSSV*SKRRCREPSSF Trigger: GAAGCTGCTGGGCTCCCTGCAGCGTCTCTTCGACAAGACAGAGGACGTCGGCTTCATGAAGAACACCAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 90 bp | GTGCTGAAGGGACCTTCTAGCATCTTCCGCAACTGCTTCTCCTTCTaGGCCACCTCGTTCAGGAACAGCTTGGAGTTCAGGTGGCCGATC | + |
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Preference number: 6 (lower is better) Translates to: VLKGPSSIFRNCFSF*ATSFRNSLEFRWPI Trigger: GATCGGCCACCTGAACTCCAAGCTGTTCCTGAACGAGGTGGCCAAGAAGGAGAAGCAGTTGCGGAAGATGCTAGAAGGTCCCTTCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 72 bp | AAGTCTTCATCCAGCAGCTGGTGCAGCTTTTCGTACTaGAGCCGCACCTCCTCCTTCAGCTGGCTCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: KSSSSSWCSFSY*SRTSSFSWLTF Trigger: GAAAGTGAGCCAGCTGAAGGAGGAGGTGCGGCTGCAGTACGAAAAGCTGCACCAGCTGCTGGATGAAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS GCA 72 bp | GGTGTGCTGAAGGGACCTTCTAGCATCTTCCGCAACTaGTTCTCCTTCTTGGCCACCTCGTTCAGGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: GVLKGPSSIFRN*FSFLATSFRNS Trigger: GCTGTTCCTGAACGAGGTGGCCAAGAAGGAGAAGCAGTTGCGGAAGATGCTAGAAGGTCCCTTCAGCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | TCCTTCAGCTGGCTCACTTTCTCCTCCACCAGGCGCTaGTCTGACTCGAGCTTGTACAGCTGGTCCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: SFSWLTFSSTRR*SDSSLYSWSSM Trigger: CATTGAGGACCAGCTGTACAAGCTCGAGTCAGACAAGCGCCTGGTGGAGGAGAAAGTGAGCCAGCTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS CAA 72 bp | GGACCTTCTAGCATCTTCCGCAACTGCTTCTCCTTCTaGGCCACCTCGTTCAGGAACAGCTTGGAGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GPSSIFRNCFSF*ATSFRNSLEFR Trigger: CCTGAACTCCAAGCTGTTCCTGAACGAGGTGGCCAAGAAGGAGAAGCAGTTGCGGAAGATGCTAGAAGGTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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| CDS TCA 72 bp | TGTCCATTAGGATTTTCACAGACTTGGTGTTCTTCATaGAGCCGACGTCCTCTGTCTTGTCGAAGAGACGCT | + |
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Preference number: 6 (lower is better) Translates to: CPLGFSQTWCSS*SRRPLSCRRDA Trigger: AGCGTCTCTTCGACAAGACAGAGGACGTCGGCTTCATGAAGAACACCAAGTCTGTGAAAATCCTAATGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026008.9 |
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