Pregenerated sensors for TRIM75 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071089Ensembl transcript IDs: ENSMUST00000095295.3
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGAGATGGGAGACAGCAGACAGGCTGACAGTTGGTACCCAACCTaGTCAGCATATAAAGGTCTAGGCCAGTCAGGGTTACATAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: AEMGDSRQADSWYPT*SAYKGLGQSGLHSK Trigger: CTTGCTATGTAACCCTGACTGGCCTAGACCTTTATATGCTGATCAGGTTGGGTACCAACTGTCAGCCTGTCTGCTGTCTCCCATCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR CCA 90 bp | AGTGTGTTGATCTGTGCTTGTAAACCCAGATACAGGAAGCTGAGATaGGAGACAGCAGACAGGCTGACAGTTGGTACCCAACCTGATCAG | + |
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Preference number: 1 (lower is better) Translates to: SVLICACKPRYRKLR*ETADRLTVGTQPDQ Trigger: CTGATCAGGTTGGGTACCAACTGTCAGCCTGTCTGCTGTCTCCCATCTCAGCTTCCTGTATCTGGGTTTACAAGCACAGATCAACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR CCA 90 bp | AATGTATCCTCAAATACAAATCTCAAAGGCTGGGCATTTGTGAGATaGGGGTTAGACAATCATGAATTAATTCAAGGTCAGCCTCTACTG | + |
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Preference number: 1 (lower is better) Translates to: NVSSNTNLKGWAFVR*GLDNHELIQGQPLL Trigger: CAGTAGAGGCTGACCTTGAATTAATTCATGATTGTCTAACCCCCATCTCACAAATGCCCAGCCTTTGAGATTTGTATTTGAGGATACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR CCA 90 bp | GATTCTAGAGAAACTAATGTATCCTCAAATACAAATCTCAAAGGCTaGGCATTTGTGAGATGGGGGTTAGACAATCATGAATTAATTCAA | + |
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Preference number: 1 (lower is better) Translates to: DSRETNVSSNTNLKG*AFVRWGLDNHELIQ Trigger: TTGAATTAATTCATGATTGTCTAACCCCCATCTCACAAATGCCCAGCCTTTGAGATTTGTATTTGAGGATACATTAGTTTCTCTAGAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTGTCTCTCTGATGACAACATCCCAAATGCTTTCCTGCAGCTTTTTGAAAGCTTGGGGCCAGCCTaGACTGGGGGAAGGAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SLCLSDDNIPNAFLQLFESLGPA*TGGRRV Trigger: CACTCTCCTTCCCCCAGTCCAGGCTGGCCCCAAGCT...TTCAAAAAGCTGCAGGAAAGCATTTGGGATGTTGTCATCAGAGAGACAAAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR-3UTR CCA 90 bp | AGACTACATCAAAATCAGACAGGGCTGATGATGCTAGTTAGCTCTCTGAATCCATACAGGAAGCTGAGATaGGAGACAGCAGACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RLHQNQTGLMMLVSSLNPYRKLR*ETADRL Trigger: CAGCCTGTCTGCTGTCTCCCATCTCAGCTTCCTGTA...TGGATTCAGAGAGCTAACTAGCATCATCAGCCCTGTCTGATTTTGATGTAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR-3UTR TCA 90 bp | CATGAATTAATTCAAGGTCAGCCTCTACTGTGTATCAAGTTTGAGGCTAGCCTACCAGATACAGGAAGCTaGGATGGGAGACAGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: HELIQGQPLLCIKFEASLPDTGS*DGRQQT Trigger: TGTCTGCTGTCTCCCATCTCAGCTTCCTGTATCTGG...TAGGCTAGCCTCAAACTTGATACACAGTAGAGGCTGACCTTGAATTAATTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR-3UTR CCA 90 bp | CATGAATTAATTCAAGGTCAGCCTCTACTGTGTATCAAGTTTGAGGCTAGCCTAAATAATTGGGAGGGCTaGACCAGGCTGGGTTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: HELIQGQPLLCIKFEASLNNWEG*TRLGCK Trigger: TTTACAACCCAGCCTGGTCCAGCCCTCCCAATTATT...TAGGCTAGCCTCAAACTTGATACACAGTAGAGGCTGACCTTGAATTAATTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR-3UTR CCA 90 bp | GAGAATGAAAAACTCAAGGTTAGCCTGGACAATTTAACACAAGACTACATCAAACCCCAGTACTGGAAATaGAAAGAGAGAGGGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: ENEKLKVSLDNLTQDYIKPQYWK*KERGEW Trigger: CCACTCCCCTCTCTCTTTCCATTTCCAGTACTGGGG...TTTGATGTAGTCTTGTGTTAAATTGTCCAGGCTAACCTTGAGTTTTTCATTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR-3UTR CCA 90 bp | GTCACAATTCAACATGTGAACATATGCAGTGTTTATATCAGGTTACAACTGTCTGTAATACCAAATAATTaGGAGGGCTGGACCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VTIQHVNICSVYIRLQLSVIPNN*EGWTRL Trigger: CAGCCTGGTCCAGCCCTCCCAATTATTTGGTATTAC...AGACAGTTGTAACCTGATATAAACACTGCATATGTTCACATGTTGAATTGTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR-3UTR TCA 90 bp | GTCACAATTCAACATGTGAACATATGCAGTGTTTATATCAGGTTACAACTGTCTACCAATTTTAGGGCCTaGGATGGCTTAGCAGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: VTIQHVNICSVYIRLQLSTNFRA*DGLAGK Trigger: TTTACCTGCTAAGCCATCTCAGGCCCTAAAATTGGT...AGACAGTTGTAACCTGATATAAACACTGCATATGTTCACATGTTGAATTGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR-3UTR TCA 90 bp | AATCATGAATTAATTCAAGGTCAGCCTCTACTGTGTATCAAGTTTGAGGCTAGCGGAGAGTGCAGAACATaGATAAACCTCTTAAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: NHELIQGQPLLCIKFEASGECRT*INLLKL Trigger: TAACTTTAAGAGGTTTATTCATGTTCTGCACTCTCC...GCTAGCCTCAAACTTGATACACAGTAGAGGCTGACCTTGAATTAATTCATGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR TCA 72 bp | GGCCAGCCTGGACTGGGGGAAGGAGAGTGCAGAACATaGATAAACCTCTTAAAGTTAAGGCCACCGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: GQPGLGEGECRT*INLLKLRPPCE Trigger: CTCACACGGTGGCCTTAACTTTAAGAGGTTTATTCATGTTCTGCACTCTCCTTCCCCCAGTCCAGGCTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR TCA 72 bp | GGAGACAGCAGACAGGCTGACAGTTGGTACCCAACCTaGTCAGCATATAAAGGTCTAGGCCAGTCAGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: GDSRQADSWYPT*SAYKGLGQSGL Trigger: TAACCCTGACTGGCCTAGACCTTTATATGCTGATCAGGTTGGGTACCAACTGTCAGCCTGTCTGCTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR TCA 72 bp | AAGGAAGTTGCTTGCAATCCCAGCTACGTGGGAGTCTaGAGGGTGAGAATGAAAAACTCAAGGTTAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: KEVACNPSYVGV*RVRMKNSRLAW Trigger: CCAGGCTAACCTTGAGTTTTTCATTCTCACCCTTCAGACTCCCACGTAGCTGGGATTGCAAGCAACTTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR GCA 72 bp | AGGACAGGGTACTTTCTGTTTGATCTAACTGTGACTTaGGGCCATTCATCAGCCTCTTTGTTTCCCATCTCT | + |
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Preference number: 3 (lower is better) Translates to: RTGYFLFDLTVT*GHSSASLFPIS Trigger: AGAGATGGGAAACAAAGAGGCTGATGAATGGCCGCAAGTCACAGTTAGATCAAACAGAAAGTACCCTGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR TCA 72 bp | AGGCTGGGCATTTGTGAGATGGGGGTTAGACAATCATaGATTAATTCAAGGTCAGCCTCTACTGTGTATCAA | + |
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Preference number: 3 (lower is better) Translates to: RLGICEMGVRQS*INSRSASTVYQ Trigger: TTGATACACAGTAGAGGCTGACCTTGAATTAATTCATGATTGTCTAACCCCCATCTCACAAATGCCCAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR TCA 72 bp | TGTTTCCCATCTCTATCAAGAACCAATTTTAGGGCCTaGGATGGCTTAGCAGGTAAACAAACTTGCCACACA | + |
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Preference number: 3 (lower is better) Translates to: CFPSLSRTNFRA*DGLAGKQTCHT Trigger: TGTGTGGCAAGTTTGTTTACCTGCTAAGCCATCTCAGGCCCTAAAATTGGTTCTTGATAGAGATGGGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR CCA 72 bp | TCAAATACAAATCTCAAAGGCTGGGCATTTGTGAGATaGGGGTTAGACAATCATGAATTAATTCAAGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SNTNLKGWAFVR*GLDNHELIQGQ Trigger: CTGACCTTGAATTAATTCATGATTGTCTAACCCCCATCTCACAAATGCCCAGCCTTTGAGATTTGTATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR CCA 72 bp | GAAACTAATGTATCCTCAAATACAAATCTCAAAGGCTaGGCATTTGTGAGATGGGGGTTAGACAATCATGAA | + |
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Preference number: 3 (lower is better) Translates to: ETNVSSNTNLKG*AFVRWGLDNHE Trigger: TTCATGATTGTCTAACCCCCATCTCACAAATGCCCAGCCTTTGAGATTTGTATTTGAGGATACATTAGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR TCA 72 bp | AGTACATTAATGGGAACCTTGTCACAATTCAACATGTaGACATATGCAGTGTTTATATCAGGTTACAACTGT | + |
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Preference number: 3 (lower is better) Translates to: STLMGTLSQFNM*TYAVFISGYNC Trigger: ACAGTTGTAACCTGATATAAACACTGCATATGTTCACATGTTGAATTGTGACAAGGTTCCCATTAATGTACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | AGGACAGGGTACTTTCTGTTTGATCTAACTGTGACTTGCGGCCATTCATCAGCCACCTGGTGGCGCCCGTaGCTCTCAGGCTCCACGCAC | + |
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Preference number: 4 (lower is better) Translates to: RTGYFLFDLTVTCGHSSATWWRP*LSGSTH Trigger: GTGCGTGGAGCCTGAGAGCCACGGGCGCCACCAGGT...GGCTGATGAATGGCCGCAAGTCACAGTTAGATCAAACAGAAAGTACCCTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR TCA 90 bp | TATATAACAAGCTTGGGGCCAGCCTGGACTGGGGGAAGGAGAGTGCAGAACATGGCTGGGCATTGCTTCTaGGGTTCCTGTGTTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: YITSLGPAWTGGRRVQNMAGHCF*GSCVGT Trigger: AGTGCCAACACAGGAACCTCAGAAGCAATGCCCAGC...CATGTTCTGCACTCTCCTTCCCCCAGTCCAGGCTGGCCCCAAGCTTGTTATATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | AGATGGGAGACAGCAGACAGGCTGACAGTTGGTACCCAACCTGATCAGCATATACTCTGTGCCTCTGCTTaGTCCCTCAGGGTCACGGTT | + |
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Preference number: 4 (lower is better) Translates to: RWETADRLTVGTQPDQHILCASA*SLRVTV Trigger: AACCGTGACCCTGAGGGAGCAAGCAGAGGCACAGAG...TATATGCTGATCAGGTTGGGTACCAACTGTCAGCCTGTCTGCTGTCTCCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | TATATAACAAGCTTGGGGCCAGCCTGGACTGGGGGAAGGAGAGTGCAGAACATGCACTTGGTCTCTTTCTaGAGTCTGGCCAAGACCTCG | + |
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Preference number: 4 (lower is better) Translates to: YITSLGPAWTGGRRVQNMHLVSF*SLAKTS Trigger: CGAGGTCTTGGCCAGACTCCAGAAAGAGACCAAGTG...CATGTTCTGCACTCTCCTTCCCCCAGTCCAGGCTGGCCCCAAGCTTGTTATATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | AGATGGGAGACAGCAGACAGGCTGACAGTTGGTACCCAACCTGATCAGCATATACTGGTGCTGCTCTCGTaGCTCTTGTTCTCCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: RWETADRLTVGTQPDQHILVLLS*LLFSMP Trigger: AGGCATGGAGAACAAGAGGCACGAGAGCAGCACCAG...TATATGCTGATCAGGTTGGGTACCAACTGTCAGCCTGTCTGCTGTCTCCCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | TATATAACAAGCTTGGGGCCAGCCTGGACTGGGGGAAGGAGAGTGCAGAACATGAACAGATGGGGCACTTaGTCTCTTTCTGGAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: YITSLGPAWTGGRRVQNMNRWGT*SLSGVW Trigger: CCAGACTCCAGAAAGAGACCAAGTGCCCCATCTGTT...CATGTTCTGCACTCTCCTTCCCCCAGTCCAGGCTGGCCCCAAGCTTGTTATATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | TATATAACAAGCTTGGGGCCAGCCTGGACTGGGGGAAGGAGAGTGCAGAACATGCCCACTTCAGGAGCTTaGTATAGTCCTGAAGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: YITSLGPAWTGGRRVQNMPTSGA*YSPEGV Trigger: AACACCTTCAGGACTATAGCAAGCTCCTGAAGTGGG...CATGTTCTGCACTCTCCTTCCCCCAGTCCAGGCTGGCCCCAAGCTTGTTATATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR CAA 72 bp | TCCAGAGGAATACAAATCCAAAGCTATATAACAAGCTaGGGGCCAGCCTGGACTGGGGGAAGGAGAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SRGIQIQSYITS*GPAWTGGRRVQ Trigger: CTGCACTCTCCTTCCCCCAGTCCAGGCTGGCCCCAAGCTTGTTATATAGCTTTGGATTTGTATTCCTCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| 3UTR CAA 72 bp | AATCCCCCAAATCTGTCAGGGCATAAAGGAAGTTGCTaGCAATCCCAGCTACGTGGGAGTCTGAAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: NPPNLSGHKGSC*QSQLRGSLKGE Trigger: CTCACCCTTCAGACTCCCACGTAGCTGGGATTGCAAGCAACTTCCTTTATGCCCTGACAGATTTGGGGGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR TCA 90 bp | AGGACAGGGTACTTTCTGTTTGATCTAACTGTGACTTGCGGCCATTCATCAGCCGGTCTAGAAACCGCATaGGCTTCTCACACTCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RTGYFLFDLTVTCGHSSAGLETA*ASHTQR Trigger: CCTCTGAGTGTGAGAAGCTCATGCGGTTTCTAGACC...GGCTGATGAATGGCCGCAAGTCACAGTTAGATCAAACAGAAAGTACCCTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | AGACTACATCAAAATCAGACAGGGCTGATGATGCTAGTTAGCTCTCTGAATCCACAGGAGGACGTGGCTTaGTGCCCTGCCCAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: RLHQNQTGLMMLVSSLNPQEDVA*CPAQKS Trigger: AGACTTCTGGGCAGGGCAGCAAGCCACGTCCTCCTG...TGGATTCAGAGAGCTAACTAGCATCATCAGCCCTGTCTGATTTTGATGTAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | TCTAACTGTGACTTGCGGCCATTCATCAGCCTCTTTGTTTCCCATCTCTATCAAGCCTCTTGTTCTCCATaGCTTGGAGCAGCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SNCDLRPFISLFVSHLYQASCSP*LGAAGQ Trigger: CTGCCCAGCTGCTCCAAGGCATGGAGAACAAGAGGC...TTGATAGAGATGGGAAACAAAGAGGCTGATGAATGGCCGCAAGTCACAGTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | TCAGGGTTACATAGCAAGAGTACAGGCGCTCACGCCTGTCATCCTATCAATAAGGGCTTCTTTCCTACCTaGACCTCCCAGAAGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SGLHSKSTGAHACHPINKGFFPT*TSQKCL Trigger: GAGACACTTCTGGGAGGTGCAGGTAGGAAAGAAGCC...CTTATTGATAGGATGACAGGCGTGAGCGCCTGTACTCTTGCTATGTAACCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR TCA 90 bp | AGATGGGAGACAGCAGACAGGCTGACAGTTGGTACCCAACCTGATCAGCATATATCCACTCTTCTCAACTaGACTGGGAAAATGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: RWETADRLTVGTQPDQHISTLLN*TGKMLG Trigger: CCCAAGCATTTTCCCAGTTCAGTTGAGAAGAGTGGA...TATATGCTGATCAGGTTGGGTACCAACTGTCAGCCTGTCTGCTGTCTCCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | AGATGGGAGACAGCAGACAGGCTGACAGTTGGTACCCAACCTGATCAGCATATAATCATGTTTCCCAGCTaGGCATTGCTTCTGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RWETADRLTVGTQPDQHIIMFPS*ALLLRF Trigger: GAACCTCAGAAGCAATGCCCAGCTGGGAAACATGAT...TATATGCTGATCAGGTTGGGTACCAACTGTCAGCCTGTCTGCTGTCTCCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | TATATAACAAGCTTGGGGCCAGCCTGGACTGGGGGAAGGAGAGTGCAGAACATGCCCAGAATTAAAATGTaGAATCCCCAACACAACAGG | + |
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Preference number: 4 (lower is better) Translates to: YITSLGPAWTGGRRVQNMPRIKM*NPQHNR Trigger: CCTGTTGTGTTGGGGATTCCACATTTTAATTCTGGG...CATGTTCTGCACTCTCCTTCCCCCAGTCCAGGCTGGCCCCAAGCTTGTTATATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR TCA 90 bp | CATGAATTAATTCAAGGTCAGCCTCTACTGTGTATCAAGTTTGAGGCTAGCCTAGTCTCAGGAGGTCTCTaGGGCTGGAACCGTGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: HELIQGQPLLCIKFEASLVSGGL*GWNRGV Trigger: AACACCACGGTTCCAGCCTCAGAGACCTCCTGAGAC...TAGGCTAGCCTCAAACTTGATACACAGTAGAGGCTGACCTTGAATTAATTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR TCA 90 bp | AATCATGAATTAATTCAAGGTCAGCCTCTACTGTGTATCAAGTTTGAGGCTAGCCAGCTCCTGAGACGTTaGAGCTGTCCCCCTGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: NHELIQGQPLLCIKFEASQLLRR*SCPPAK Trigger: TTTGGCAGGGGGACAGCTTCAACGTCTCAGGAGCTG...GCTAGCCTCAAACTTGATACACAGTAGAGGCTGACCTTGAATTAATTCATGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | CCTGTCATCCTATCAATAAGACCATGTAATCCAGAGGAATACAAATCCAAAGCTCGTGGCTTGCTGCCCTaGCCAGAAGTCTTTGATGCA | + |
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Preference number: 4 (lower is better) Translates to: PVILSIRPCNPEEYKSKARGLLP*PEVFDA Trigger: TGCATCAAAGACTTCTGGGCAGGGCAGCAAGCCACG...AGCTTTGGATTTGTATTCCTCTGGATTACATGGTCTTATTGATAGGATGACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | AGCCTTTGTCTCTCTGATGACAACATCCCAAATGCTTTCCTGCAGCTTTTTGAACTGAGGCTGGAACCGTaGTGTTCTAATGCTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: SLCLSDDNIPNAFLQLFELRLEP*CSNAAM Trigger: CATAGCAGCATTAGAACACCACGGTTCCAGCCTCAG...TTCAAAAAGCTGCAGGAAAGCATTTGGGATGTTGTCATCAGAGAGACAAAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | ATGATGAGAGAAGAGAAGTATTTCCTGACCTCCACACTCTCAACGATAGTTCATGCCAATAGCCCACTTTaGCTTCTTTCCTACCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: MMREEKYFLTSTLSTIVHANSPL*LLSYLH Trigger: GTGCAGGTAGGAAAGAAGCCAAAGTGGGCTATTGGC...ATGAACTATCGTTGAGAGTGTGGAGGTCAGGAAATACTTCTCTTCTCTCATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | CATGAATTAATTCAAGGTCAGCCTCTACTGTGTATCAAGTTTGAGGCTAGCCTAGATCGTCCAAACAGATaGGGCACTTGGTCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HELIQGQPLLCIKFEASLDRPNR*GTWSLS Trigger: AGAAAGAGACCAAGTGCCCCATCTGTTTGGACGATC...TAGGCTAGCCTCAAACTTGATACACAGTAGAGGCTGACCTTGAATTAATTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR TCA 90 bp | GTCACAATTCAACATGTGAACATATGCAGTGTTTATATCAGGTTACAACTGTCTGCGCTCATTAGCCCTTaGATCTCTTTCACTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VTIQHVNICSVYIRLQLSALISP*ISFTSH Trigger: GTGGGAAGTGAAAGAGATTCAAGGGCTAATGAGCGC...AGACAGTTGTAACCTGATATAAACACTGCATATGTTCACATGTTGAATTGTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | ATGATGAGAGAAGAGAAGTATTTCCTGACCTCCACACTCTCAACGATAGTTCATGACATTTCTCAGGCATaGCATAGAAAGAAACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: MMREEKYFLTSTLSTIVHDISQA*HRKKPL Trigger: GAGAGGTTTCTTTCTATGGCATGCCTGAGAAATGTC...ATGAACTATCGTTGAGAGTGTGGAGGTCAGGAAATACTTCTCTTCTCTCATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CCA 90 bp | CATGAATTAATTCAAGGTCAGCCTCTACTGTGTATCAAGTTTGAGGCTAGCCTATCTTCTCAACTGAACTaGGAAAATGCTTGGGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: HELIQGQPLLCIKFEASLSSQLN*ENAWAD Trigger: ATCAGCCCAAGCATTTTCCCAGTTCAGTTGAGAAGA...TAGGCTAGCCTCAAACTTGATACACAGTAGAGGCTGACCTTGAATTAATTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR GCA 90 bp | TCTAACTGTGACTTGCGGCCATTCATCAGCCTCTTTGTTTCCCATCTCTATCAAACGTTGTCTGTAAAATaGTGTATAACTTTCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SNCDLRPFISLFVSHLYQTLSVK*CITFCR Trigger: CCTACAGAAAGTTATACAGCATTTTACAGACAACGT...TTGATAGAGATGGGAAACAAAGAGGCTGATGAATGGCCGCAAGTCACAGTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR TCA 90 bp | CCTGTCATCCTATCAATAAGACCATGTAATCCAGAGGAATACAAATCCAAAGCTCAGAAAAAGTGTCCCTaGAAGTATAGAGGTGACATT | + |
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Preference number: 4 (lower is better) Translates to: PVILSIRPCNPEEYKSKAQKKCP*KYRGDI Trigger: AATGTCACCTCTATACTTTCAGGGACACTTTTTCTG...AGCTTTGGATTTGTATTCCTCTGGATTACATGGTCTTATTGATAGGATGACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR TCA 90 bp | GTCACAATTCAACATGTGAACATATGCAGTGTTTATATCAGGTTACAACTGTCTGCTCTTGGTAAAACTTaGAGAACCAGGAATACGTTG | + |
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Preference number: 4 (lower is better) Translates to: VTIQHVNICSVYIRLQLSALGKT*RTRNTL Trigger: CAACGTATTCCTGGTTCTTCAAGTTTTACCAAGAGC...AGACAGTTGTAACCTGATATAAACACTGCATATGTTCACATGTTGAATTGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 90 bp | ATGGACAGCACCTGGTGGCGCCCGTGGCTCTCAGGCTCCACGCACTaGTCACAGAGCAACTGCAGGTCATCCTCACAGAAGAGGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: MDSTWWRPWLSGSTH*SQSNCRSSSQKRVR Trigger: CCTGACCCTCTTCTGTGAGGATGACCTGCAGTTGCTCTGTGACCAGTGCGTGGAGCCTGAGAGCCACGGGCGCCACCAGGTGCTGTCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 90 bp | AGGTGTTTCCTGTGGAGAGAGGCAGCCTCTGTAATGGACAGCACCTaGTGGCGCCCGTGGCTCTCAGGCTCCACGCACTGGTCACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: RCFLWREAASVMDST*WRPWLSGSTHWSQS Trigger: GCTCTGTGACCAGTGCGTGGAGCCTGAGAGCCACGGGCGCCACCAGGTGCTGTCCATTACAGAGGCTGCCTCTCTCCACAGGAAACACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS GCA 90 bp | CCTCACAGAAGAGGGTCAGGGCCTGGTTGTGCCTCTCGCAACTGGTaGTGCTCTCGTGCCTCTTGTTCTCCATGCCTTGGAGCAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PHRRGSGPGCASRNW*CSRASCSPCLGAAG Trigger: CCCAGCTGCTCCAAGGCATGGAGAACAAGAGGCACGAGAGCAGCACCAGTTGCGAGAGGCACAACCAGGCCCTGACCCTCTTCTGTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 90 bp | CATCCTCACAGAAGAGGGTCAGGGCCTGGTTGTGCCTCTCGCAACTaGTGCTGCTCTCGTGCCTCTTGTTCTCCATGCCTTGGAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HPHRRGSGPGCASRN*CCSRASCSPCLGAA Trigger: AGCTGCTCCAAGGCATGGAGAACAAGAGGCACGAGAGCAGCACCAGTTGCGAGAGGCACAACCAGGCCCTGACCCTCTTCTGTGAGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS TCA 90 bp | CTAACCTGGAGAAAGCTGCCCGCTCTTCCTGGTCTAGAAACCGCATaGGCTTCTCACACTCAGAGGTTAGCTGTGACCTCTGTGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LTWRKLPALPGLETA*ASHTQRLAVTSVPL Trigger: CAGAGGCACAGAGGTCACAGCTAACCTCTGAGTGTGAGAAGCTCATGCGGTTTCTAGACCAGGAAGAGCGGGCAGCTTTCTCCAGGTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CAA 90 bp | GCCTGGACTGGGGGAAGGAGAGTGCAGAACATGAATAAACCTCTTAAAGTTAAGAGGGTCAGGGCCTGGTaGTGCCTCTCGCAACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: AWTGGRRVQNMNKPLKVKRVRAW*CLSQLV Trigger: CACCAGTTGCGAGAGGCACAACCAGGCCCTGACCCT...CTTAACTTTAAGAGGTTTATTCATGTTCTGCACTCTCCTTCCCCCAGTCCAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS TCA 90 bp | CTTCGGAGAGCTCTCCGGTCAGCATCAAGTGTCTCAGGAGGTCTCTaGGGCTGGAACCGTGGTGTTCTAATGCTGCTATGTTATCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LRRALRSASSVSGGL*GWNRGVLMLLCYQA Trigger: TGCTTGATAACATAGCAGCATTAGAACACCACGGTTCCAGCCTCAGAGACCTCCTGAGACACTTGATGCTGACCGGAGAGCTCTCCGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS GCA 90 bp | AGCTTCTCACACTCAGAGGTTAGCTGTGACCTCTGTGCCTCTGCTTaGTCCCTCAGGGTCACGGTTCTTTTGTTTAGTGCGCTCATTAGC | + |
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Preference number: 5 (lower is better) Translates to: SFSHSEVSCDLCASA*SLRVTVLLFSALIS Trigger: GCTAATGAGCGCACTAAACAAAAGAACCGTGACCCTGAGGGAGCAAGCAGAGGCACAGAGGTCACAGCTAACCTCTGAGTGTGAGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 90 bp | CTCATCTCCTCGTCTTCTAACCTGGAGAAAGCTGCCCGCTCTTCCTaGTCTAGAAACCGCATGAGCTTCTCACACTCAGAGGTTAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LISSSSNLEKAARSS*SRNRMSFSHSEVSC Trigger: ACAGCTAACCTCTGAGTGTGAGAAGCTCATGCGGTTTCTAGACCAGGAAGAGCGGGCAGCTTTCTCCAGGTTAGAAGACGAGGAGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 90 bp | CCGGTCAGCATCAAGTGTCTCAGGAGGTCTCTGAGGCTGGAACCGTaGTGTTCTAATGCTGCTATGTTATCAAGCAGTCTCTTCTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: PVSIKCLRRSLRLEP*CSNAAMLSSSLFSS Trigger: GCTCGAGAAGAGACTGCTTGATAACATAGCAGCATTAGAACACCACGGTTCCAGCCTCAGAGACCTCCTGAGACACTTGATGCTGACCGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CAA 90 bp | CTAGGCCAGTCAGGGTTACATAGCAAGAGTACAGGCGCTCACGCCTGTCATCCTATAGAGGAATCAGCTTaGCAAATGCCAATAGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LGQSGLHSKSTGAHACHPIEESA*QMPIAH Trigger: GTGGGCTATTGGCATTTGCAAAGCTGATTCCTCTAT...AGGATGACAGGCGTGAGCGCCTGTACTCTTGCTATGTAACCCTGACTGGCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CAA 90 bp | GAGAATGAAAAACTCAAGGTTAGCCTGGACAATTTAACACAAGACTACATCAAAACAGGAGGACGTGGCTaGCTGCCCTGCCCAGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: ENEKLKVSLDNLTQDYIKTGGRG*LPCPEV Trigger: GACTTCTGGGCAGGGCAGCAAGCCACGTCCTCCTGT...TTTGATGTAGTCTTGTGTTAAATTGTCCAGGCTAACCTTGAGTTTTTCATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CAA 90 bp | AATCATGAATTAATTCAAGGTCAGCCTCTACTGTGTATCAAGTTTGAGGCTAGCTCAGCTCCTGAGACGTaGAAGCTGTCCCCCTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: NHELIQGQPLLCIKFEASSAPET*KLSPCQ Trigger: TTGGCAGGGGGACAGCTTCAACGTCTCAGGAGCTGA...GCTAGCCTCAAACTTGATACACAGTAGAGGCTGACCTTGAATTAATTCATGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS GCA 90 bp | TTTGGATGGGCTGTCTTCAGGTCTAGAGTGACGTTGTCTGTAAAATaGTGTATAACTTTCTGTAGGGCCGAATACTGGAGAGGAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: FGWAVFRSRVTLSVK*CITFCRAEYWRGKL Trigger: CAGCTTTCCTCTCCAGTATTCGGCCCTACAGAAAGTTATACAGCATTTTACAGACAACGTCACTCTAGACCTGAAGACAGCCCATCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 90 bp | AGGAAAGCTGTACTCCACTCTTCTCAACTGAACTGGGAAAATGCTTaGGCTGATGAGCTGACGCCTACAATTCAGGTAAAAATCCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: RKAVLHSSQLNWENA*ADELTPTIQVKILD Trigger: GTCAAGGATTTTTACCTGAATTGTAGGCGTCAGCTCATCAGCCCAAGCATTTTCCCAGTTCAGTTGAGAAGAGTGGAGTACAGCTTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CAA 90 bp | ATGATGAGAGAAGAGAAGTATTTCCTGACCTCCACACTCTCAACGATAGTTCATCCTGCCCAGAAGTCTTaGATGCAGGAACGACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: MMREEKYFLTSTLSTIVHPAQKS*MQERQK Trigger: CTTCTGTCGTTCCTGCATCAAAGACTTCTGGGCAGG...ATGAACTATCGTTGAGAGTGTGGAGGTCAGGAAATACTTCTCTTCTCTCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CAA 90 bp | AATCTGTCAGGGCATAAAGGAAGTTGCTTGCAATCCCAGCTACGTGGGAGTCTGAGGTCTAGAGTGACGTaGTCTGTAAAATGCTGTATA | + |
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Preference number: 5 (lower is better) Translates to: NLSGHKGSCLQSQLRGSLRSRVT*SVKCCI Trigger: TATACAGCATTTTACAGACAACGTCACTCTAGACCT...CAGACTCCCACGTAGCTGGGATTGCAAGCAACTTCCTTTATGCCCTGACAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CAA 90 bp | GAGAATGAAAAACTCAAGGTTAGCCTGGACAATTTAACACAAGACTACATCAAATCTGAGGTTCCTGTGTaGGCACTGGTGTCGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: ENEKLKVSLDNLTQDYIKSEVPV*ALVSAD Trigger: GTCTGCCGACACCAGTGCCAACACAGGAACCTCAGA...TTTGATGTAGTCTTGTGTTAAATTGTCCAGGCTAACCTTGAGTTTTTCATTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS TCA 90 bp | GCCCTATGTAGAAATAAGGGCAGACAGGACCAGAAAAAGTGTCCCTaGAAGTATAGAGGTGACATTTCTCAGGCATGCCATAGAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: ALCRNKGRQDQKKCP*KYRGDISQACHRKK Trigger: TTTCTTTCTATGGCATGCCTGAGAAATGTCACCTCTATACTTTCAGGGACACTTTTTCTGGTCCTGTCTGCCCTTATTTCTACATAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS-3UTR CAA 90 bp | CCTGTCATCCTATCAATAAGACCATGTAATCCAGAGGAATACAAATCCAAAGCTAACACAACAGGGCTCTaGGTAAAACTTGAAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: PVILSIRPCNPEEYKSKANTTGL*VKLEEP Trigger: TGGTTCTTCAAGTTTTACCAAGAGCCCTGTTGTGTT...AGCTTTGGATTTGTATTCCTCTGGATTACATGGTCTTATTGATAGGATGACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 72 bp | CTGTGGAGAGAGGCAGCCTCTGTAATGGACAGCACCTaGTGGCGCCCGTGGCTCTCAGGCTCCACGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: LWREAASVMDST*WRPWLSGSTHW Trigger: CCAGTGCGTGGAGCCTGAGAGCCACGGGCGCCACCAGGTGCTGTCCATTACAGAGGCTGCCTCTCTCCACAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 72 bp | ACCTGGTGGCGCCCGTGGCTCTCAGGCTCCACGCACTaGTCACAGAGCAACTGCAGGTCATCCTCACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TWWRPWLSGSTH*SQSNCRSSSQK Trigger: CTTCTGTGAGGATGACCTGCAGTTGCTCTGTGACCAGTGCGTGGAGCCTGAGAGCCACGGGCGCCACCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CAA 90 bp | GCTCTTGCGGCCTTCAGCCGAGAGTCTGGATCAGCTCCTGAGACGTaGAAGCTGTCCCCCTGCCAAACAATCCTCCAGTACCCCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALAAFSRESGSAPET*KLSPCQTILQYPQG Trigger: CCCCTGGGGGTACTGGAGGATTGTTTGGCAGGGGGACAGCTTCAACGTCTCAGGAGCTGATCCAGACTCTCGGCTGAAGGCCGCAAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS GCA 72 bp | GCCTGGTTGTGCCTCTCGCAACTGGTGCTGCTCTCGTaGCTCTTGTTCTCCATGCCTTGGAGCAGCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: AWLCLSQLVLLS*LLFSMPWSSWA Trigger: TGCCCAGCTGCTCCAAGGCATGGAGAACAAGAGGCACGAGAGCAGCACCAGTTGCGAGAGGCACAACCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS TCA 72 bp | TCTTGCGGCCTTCAGCCGAGAGTCTGGATCAGCTCCTaGGACGTTGAAGCTGTCCCCCTGCCAAACAATCCT | + |
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Preference number: 6 (lower is better) Translates to: SCGLQPRVWISS*DVEAVPLPNNP Trigger: AGGATTGTTTGGCAGGGGGACAGCTTCAACGTCTCAGGAGCTGATCCAGACTCTCGGCTGAAGGCCGCAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CAA 72 bp | GCCTTCAGCCGAGAGTCTGGATCAGCTCCTGAGACGTaGAAGCTGTCCCCCTGCCAAACAATCCTCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: AFSRESGSAPET*KLSPCQTILQY Trigger: GTACTGGAGGATTGTTTGGCAGGGGGACAGCTTCAACGTCTCAGGAGCTGATCCAGACTCTCGGCTGAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS GCA 72 bp | CGCAACTGGTGCTGCTCTCGTGCCTCTTGTTCTCCATaGCTTGGAGCAGCTGGGCAGTTTCAATCATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RNWCCSRASCSP*LGAAGQFQSCF Trigger: GAAACATGATTGAAACTGCCCAGCTGCTCCAAGGCATGGAGAACAAGAGGCACGAGAGCAGCACCAGTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 72 bp | GTCTCTTCTCGAGCCTCATCTCCTCGTCTTCTAACCTaGAGAAAGCTGCCCGCTCTTCCTGGTCTAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: VSSRASSPRLLT*RKLPALPGLET Trigger: GGTTTCTAGACCAGGAAGAGCGGGCAGCTTTCTCCAGGTTAGAAGACGAGGAGATGAGGCTCGAGAAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 72 bp | GAGAGGAAAGCTGTACTCCACTCTTCTCAACTGAACTaGGAAAATGCTTGGGCTGATGAGCTGACGCCTACA | + |
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Preference number: 6 (lower is better) Translates to: ERKAVLHSSQLN*ENAWADELTPT Trigger: TGTAGGCGTCAGCTCATCAGCCCAAGCATTTTCCCAGTTCAGTTGAGAAGAGTGGAGTACAGCTTTCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS CCA 72 bp | GTACTCCACTCTTCTCAACTGAACTGGGAAAATGCTTaGGCTGATGAGCTGACGCCTACAATTCAGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: VLHSSQLNWENA*ADELTPTIQVK Trigger: TTTTACCTGAATTGTAGGCGTCAGCTCATCAGCCCAAGCATTTTCCCAGTTCAGTTGAGAAGAGTGGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS TCA 72 bp | AGAAATAAGGGCAGACAGGACCAGAAAAAGTGTCCCTaGAAGTATAGAGGTGACATTTCTCAGGCATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RNKGRQDQKKCP*KYRGDISQACH Trigger: ATGGCATGCCTGAGAAATGTCACCTCTATACTTTCAGGGACACTTTTTCTGGTCCTGTCTGCCCTTATTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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| CDS GCA 72 bp | GCTGTCTTCAGGTCTAGAGTGACGTTGTCTGTAAAATaGTGTATAACTTTCTGTAGGGCCGAATACTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: AVFRSRVTLSVK*CITFCRAEYWR Trigger: TCTCCAGTATTCGGCCCTACAGAAAGTTATACAGCATTTTACAGACAACGTCACTCTAGACCTGAAGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095295.3 |
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