Pregenerated sensors for TRIM72 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042828Ensembl transcript IDs: ENSMUST00000081042.6, ENSMUST00000106248.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTaGGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAAC | + |
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Preference number: 1 (lower is better) Translates to: SIRQTPTSWPPSARG*GPRNPPPPNPSRPN Trigger: GTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| 3UTR TCA 90 bp | TTCCTCCTGGAACTCTTGGCCCAAACTCAGGTTTCCTCACTGACCTaGGTAATCTTCCCTCTATCCCTCACGTCGGTCCCCCTGTGCACC | + |
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Preference number: 1 (lower is better) Translates to: FLLELLAQTQVSSLT*VIFPLSLTSVPLCT Trigger: GGTGCACAGGGGGACCGACGTGAGGGATAGAGGGAAGATTACTCAGGTCAGTGAGGAAACCTGAGTTTGGGCCAAGAGTTCCAGGAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR GCA 90 bp | TCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGGATaGTGGGATTATAGCCATGCACCCAGCACCCTCTCAGGACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SCWLSTFILLPQPPG*WDYSHAPSTLSGLL Trigger: CAGCAGTCCTGAGAGGGTGCTGGGTGCATGGCTATAATCCCAGCATCCAGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGATGCTGGGATTATAGCCATGCACCCAGCACCCTCTCAGGACTGCTGGGGAGTGGATCGCAGGGCTaGAGAGACCATTGTTCCACA | + |
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Preference number: 2 (lower is better) Translates to: PGCWDYSHAPSTLSGLLGSGSQG*RDHCST Trigger: TGTGGAACAATGGTCTCTTCAGCCCTGCGATCCACT...CCCCAGCAGTCCTGAGAGGGTGCTGGGTGCATGGCTATAATCCCAGCATCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGACAAAGGTGGCCTGAGTaGTCCCACCGCCTTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TPLNSIRQTPTSWPPSARQRWPE*SHRLQD Trigger: GTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTG...TCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTACTCCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCACAAAGGTGGCCTGAGTaGTCCCACCGCCTTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LCTPLNSIRQTPTSWPPSQRWPE*SHRLQD Trigger: GTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTG...TGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGGAGTACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAAGGAGGGGGCCTTCAGGAGTGGATCGCAGGGCTGAAGAGACCATTGTTTCCTCCTGGAACTCTTaGCCCAAACTCAGGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LKRRGPSGVDRRAEETIVSSWNS*PKLRFP Trigger: AGGAAACCTGAGTTTGGGCCAAGAGTTCCAGGAGGA...AACAATGGTCTCTTCAGCCCTGCGATCCACTCCTGAAGGCCCCCTCCTTTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCACAGACTTCCCAAGATCCTCCACTAAATCCTTTCCAAATCCTATCCTCTCAAACACCCACTTCCTaGCCACCCTCAGCCAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VPQTSQDPPLNPFQILSSQTPTS*PPSARG Trigger: CCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTG...AGAGGATAGGATTTGGAAAGGATTTAGTGGAGGATCTTGGGAAGTCTGTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGGACCTCAGCTTCCTCCTaGAACTCTTGGCCCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: FDRVLLAFNFHPLASASWTSASS*NSWPKL Trigger: GAGTTTGGGCCAAGAGTTCCAGGAGGAAGCTGAGGT...CCAGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTATCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR TCA 72 bp | CCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTaGGTGATCCCACCGCCTTCAGGACCAGGCCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: PHPTHPDLTKVA*VIPPPSGPGLP Trigger: AGGGAGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| 3UTR TCA 72 bp | CAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTaGGGCCCTAGAAATCCACCCCCACCCAACCCATCC | + |
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Preference number: 3 (lower is better) Translates to: QTPTSWPPSARG*GPRNPPPPNPS Trigger: GGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| 3UTR-3UTR CAA 90 bp | GATGCTGGGATTATAGCCATGCACCCAGCACCCTCTCAGGACTGCTGGGGGCTTTTCCTCCTGGAACTCTaGGCCCAAACTCAGGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: DAGIIAMHPAPSQDCWGLFLLEL*AQTQVS Trigger: GGAAACCTGAGTTTGGGCCAAGAGTTCCAGGAGGAA...AAGCCCCCAGCAGTCCTGAGAGGGTGCTGGGTGCATGGCTATAATCCCAGCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR TCA 72 bp | GAAAAGGAGGGGGCCTTCAGGAGTGGATCGCAGGGCTaGAGAGACCATTGTTCCACAGACTTCCCAAGATCC | + |
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Preference number: 3 (lower is better) Translates to: EKEGAFRSGSQG*RDHCSTDFPRS Trigger: GGATCTTGGGAAGTCTGTGGAACAATGGTCTCTTCAGCCCTGCGATCCACTCCTGAAGGCCCCCTCCTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR-3UTR CAA 90 bp | GCACCCAGCACCCTCTCAGGACTGCTGGGGGCTTTGAAAAGACAGTTAGATACGGGGCTGAAGAGACCATaGTTCCACAGACTTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: APSTLSGLLGALKRQLDTGLKRP*FHRLPK Trigger: CTTGGGAAGTCTGTGGAACAATGGTCTCTTCAGCCC...CGTATCTAACTGTCTTTTCAAAGCCCCCAGCAGTCCTGAGAGGGTGCTGGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR TCA 72 bp | GAACTCTTGGCCCAAACTCAGGTTTCCTCACTGACCTaGGTAATCTTCCCTCTATCCCTCACGTCGGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: ELLAQTQVSSLT*VIFPLSLTSVP Trigger: GGGGACCGACGTGAGGGATAGAGGGAAGATTACTCAGGTCAGTGAGGAAACCTGAGTTTGGGCCAAGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR TCA 72 bp | ATTGAAAACCCATCGGGTATGAGGAATCTGCAACCTTaGAAAGGAGGGGGCCTTCAGGAGTGGATCGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: IENPSGMRNLQP*KGGGLQEWIAG Trigger: CCCTGCGATCCACTCCTGAAGGCCCCCTCCTTTTCAAGGTTGCAGATTCCTCATACCCGATGGGTTTTCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| 3UTR GCA 72 bp | CTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGGATaGTGGGATTATAGCCATGCACCCAGCACCCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LSTFILLPQPPG*WDYSHAPSTLS Trigger: TGAGAGGGTGCTGGGTGCATGGCTATAATCCCAGCATCCAGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS-3UTR TCA 90 bp | CCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTCCCTCCCAGCCACAGCCCCTGTaGGGGCACCGCGTGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: PNKGGLSDPTAFRTRPPSQPQPL*GHRVQP Trigger: CGGCTGCACGCGGTGCCCTCACAGGGGCTGTGGCTG...GGAGGGAGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | CTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCCGCAGCAGGCTCCCCTaGCACCCGGATCAGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LYKTNTHFLATLSQRVRPRSRLP*HPDQAG Trigger: GCCTGCCTGATCCGGGTGGCAGGGGAGCCTGCTGCG...GGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | ATCTTCCCTCTATCCCTCACGTCGGTCCCCCTGTGCACCCCAACCTGTGTACTCCGCAGCAGGCTCCCCTaGCACCCGGATCAGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: IFPLSLTSVPLCTPTCVLRSRLP*HPDQAG Trigger: GCCTGCCTGATCCGGGTGGCAGGGGAGCCTGCTGCG...GAGTACACAGGTTGGGGTGCACAGGGGGACCGACGTGAGGGATAGAGGGAAGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | CTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCGTGCCCGCGGCTCCTTaGCCTCCACGTGCGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LYKTNTHFLATLSQRVRPVPAAP*PPRAPP Trigger: TGGAGGCGCACGTGGAGGCCAAGGAGCCGCGGGCAC...GGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR TCA 90 bp | CAGCCAGAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAGGGCAGGACAGTTCCTaGCGCAGAAGGCCGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: QPEGEALEIHPHPTHPDLGQDSS*RRRPGA Trigger: TGCACCCGGCCTTCTGCGTCAGGAACTGTCCTGCCC...TAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR TCA 90 bp | GACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCCGGCGCCTTCTGGTCTaGGCACTCCACTCGGCGACC | + |
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Preference number: 4 (lower is better) Translates to: DKHPLPGHPQPEGEALEIRRLLV*ALHSAT Trigger: GGTCGCCGAGTGGAGTGCTCAGACCAGAAGGCGCCG...GATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTCTATCCCTCACGTCGGTCCCCCTGTGCACCCCAACCTGTGTACTCCCCCCCTGTGACAGCAGCTaGTGCGCCACCACCGCTACT | + |
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Preference number: 4 (lower is better) Translates to: FPLSLTSVPLCTPTCVLPPCDSS*CATTAT Trigger: AGTAGCGGTGGTGGCGCAGCAGCTGCTGTCACAGGG...GGGGAGTACACAGGTTGGGGTGCACAGGGGGACCGACGTGAGGGATAGAGGGAA 63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | CTGGATGCTGGGATTATAGCCATGCACCCAGCACCCTCTCAGGACTGCTGGGGGTGTGACAGCAGCTGCTaGGCCACCACCGCTACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LDAGIIAMHPAPSQDCWGCDSSC*ATTATA Trigger: GGCAGTAGCGGTGGTGGCGCAGCAGCTGCTGTCACA...CCCCCAGCAGTCCTGAGAGGGTGCTGGGTGCATGGCTATAATCCCAGCATCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | CCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGGAGGCCTCTCTGGGGTaGGCAGTGCCCGCGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PELYKTNTHFLATLSQRVEASLG*AVPAAP Trigger: AGGAGCCGCGGGCACTGCGCACCCCAGAGAGGCCTC...CACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | AGACCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTCCCAGGTGTTCCTCGCAGTaGCCTTGGGGCACTTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: RPNKGGLSDPTAFRTRPPRCSSQ*PWGTCA Trigger: GGCGCAAGTGCCCCAAGGCCACTGCGAGGAACACCT...GGGAGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | CTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCGCTGGCGGCGCCTTCTaGTCTGAGCACTCCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: LYKTNTHFLATLSQRVRPAGGAF*SEHSTR Trigger: CCGAGTGGAGTGCTCAGACCAGAAGGCGCCGCCAGC...GGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | GACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCGCTGGCGGCGCCTTCTaGTCTGAGCACTCCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: DKHPLPGHPQPEGEALEIAGGAF*SEHSTR Trigger: CCGAGTGGAGTGCTCAGACCAGAAGGCGCCGCCAGC...GATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | CCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGAGTGTGCCCGCGGCTCCTTaGCCTCCACGTGCGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PRNPPPPNPSRPNKGGLSVPAAP*PPRAPP Trigger: TGGAGGCGCACGTGGAGGCCAAGGAGCCGCGGGCAC...ACTCAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR TCA 90 bp | CAGCCAGAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTATCCACCTCCACCAGCTaGTGCTCCAGCACCGCTACA | + |
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Preference number: 4 (lower is better) Translates to: QPEGEALEIHPHPTHPDLSTSTS*CSSTAT Trigger: TGTAGCGGTGCTGGAGCATCAGCTGGTGGAGGTGGA...TAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR TCA 90 bp | CCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGAGTCGGCGCCTTCTGGTCTaGGCACTCCACTCGGCGACC | + |
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Preference number: 4 (lower is better) Translates to: PRNPPPPNPSRPNKGGLSRRLLV*ALHSAT Trigger: GGTCGCCGAGTGGAGTGCTCAGACCAGAAGGCGCCG...ACTCAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR TCA 90 bp | CTGTGTACTCCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCACAGCCACAGCCCCTGTaGGGGCACCGCGTGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: LCTPLNSIRQTPTSWPPSQPQPL*GHRVQP Trigger: CGGCTGCACGCGGTGCCCTCACAGGGGCTGTGGCTG...TGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGGAGTACACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGCCCTGTGACAGCAGCTaGTGCGCCACCACCGCTACT | + |
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Preference number: 4 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLPCDSS*CATTAT Trigger: AGTAGCGGTGGTGGCGCAGCAGCTGCTGTCACAGGG...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCTATCCCTCACGTCGGTCCCCCTGTGCACCCCAACCTGTGTACTCCCCGCACGGCAGAAACTGTaGCCACACTCAGCCGTCACT | + |
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Preference number: 4 (lower is better) Translates to: FPLSLTSVPLCTPTCVLPARQKL*PHSAVT Trigger: AGTGACGGCTGAGTGTGGCCACAGTTTCTGCCGTGC...GGGGAGTACACAGGTTGGGGTGCACAGGGGGACCGACGTGAGGGATAGAGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | CTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCAGGTGTTCCTCGCAGTaGCCTTGGGGCACTTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LYKTNTHFLATLSQRVRPRCSSQ*PWGTCA Trigger: GGCGCAAGTGCCCCAAGGCCACTGCGAGGAACACCT...GGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | GACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCGTCTTGAGGCGTGCTTaGGCTTCAGCGGCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: DKHPLPGHPQPEGEALEIVLRRA*ASAAGR Trigger: CCTGCCTGCCGCTGAAGCCCAAGCACGCCTCAAGAC...GATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | CTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCACAGCTCCCCGGAACTaGCGCACTGTCTCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: LYKTNTHFLATLSQRVRPTAPRN*RTVSST Trigger: GGTGGAGGAGACAGTGCGCCAGTTCCGGGGAGCTGT...GGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR TCA 90 bp | GAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGGGGCAGGACAGTTCCTaGCGCAGAAGGCCGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ELYKTNTHFLATLSQRVRGQDSS*RRRPGA Trigger: TGCACCCGGCCTTCTGCGTCAGGAACTGTCCTGCCC...CCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGGGCGCATCGAACAGCTaGAAGCACAGTGGGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLGASNS*KHSGQD Trigger: GTCCTGCCCACTGTGCTTGCAGCTGTTCGATGCGCC...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTCTATCCCTCACGTCGGTCCCCCTGTGCACCCCAACCTGTGTACTCCCCCGCATGCATGCCTCCTaGAGCTGCATCTTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FPLSLTSVPLCTPTCVLPRMHAS*SCIFCC Trigger: ACAGCAGAAGATGCAGCTGCAGGAGGCATGCATGCG...GGGGAGTACACAGGTTGGGGTGCACAGGGGGACCGACGTGAGGGATAGAGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | TCCAGACCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTCGCCACCACCGCTACTaGCTTGTCGAACTGACGCGT | + |
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Preference number: 4 (lower is better) Translates to: SRPNKGGLSDPTAFRTRPRHHRY*LVELTR Trigger: ACGCGTCAGTTCGACAAGGCAGTAGCGGTGGTGGCG...AGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | GCAACCTTGAAAAGGAGGGGGCCTTCAGGAGTGGATCGCAGGGCTGAAGAGACCTCCTTGGCCTCCACGTaGGCCTCCAGGATCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ATLKRRGPSGVDRRAEETSLAST*ASRILP Trigger: TGGCAAGATCCTGGAGGCGCACGTGGAGGCCAAGGA...GGTCTCTTCAGCCCTGCGATCCACTCCTGAAGGCCCCCTCCTTTTCAAGGTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | AAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCCACGGGGCTGGGCATTCTTaGCCTTGTCGTGCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: KHPLPGHPQPEGEALEIHGAGHS*PCRAST Trigger: TGTGCTGGCACGACAAGGGCAAGAATGCCCAGCCCC...GTGGATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR TCA 90 bp | CCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTCCACCTCCACCAGCTaGTGCTCCAGCACCGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: PLNSIRQTPTSWPPSARGSTSTS*CSSTAT Trigger: TGTAGCGGTGCTGGAGCATCAGCTGGTGGAGGTGGA...CCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGGTAAGAGTTCAGGCTTaGCAGCTCCCGACGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLVRVQA*QLPTQG Trigger: GCCTTGCGTCGGGAGCTGTCAAGCCTGAACTCTTAC...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCACTGCCTTGTCGAACTaGCGCGTGTCTTCTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EALEIHPHPTHPDLTKVATALSN*RVSSPA Trigger: AGCGGGAGAAGACACGCGTCAGTTCGACAAGGCAGT...GGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR TCA 90 bp | GACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCACTGCCTTGTCGAACTaGCGCGTGTCTTCTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKHPLPGHPQPEGEALEITALSN*RVSSPA Trigger: AGCGGGAGAAGACACGCGTCAGTTCGACAAGGCAGT...GATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGGCGCATCGAACAGCTaGAAGCACAGTGGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGEALEIHPHPTHPDLTKGASNS*KHSGQD Trigger: GTCCTGCCCACTGTGCTTGCAGCTGTTCGATGCGCC...CTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGCGCCACCACCGCTACTaGCTTGTCGAACTGACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLNSIRQTPTSWPPSARGRHHRY*LVELTR Trigger: ACGCGTCAGTTCGACAAGGCAGTAGCGGTGGTGGCG...CCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGTGTGACAGCAGCTGCTaGGCCACCACCGCTACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELYKTNTHFLATLSQRVRCDSSC*ATTATA Trigger: GGCAGTAGCGGTGGTGGCGCAGCAGCTGCTGTCACA...CCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGTCCTTGGCCTCCACGTaGGCCTCCAGGATCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGEALEIHPHPTHPDLTKSLAST*ASRILP Trigger: TGGCAAGATCCTGGAGGCGCACGTGGAGGCCAAGGA...CTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGCAGCTGCAAGCACAGTaGGCAGGACAGTTCCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLQLQAQ*AGQFLT Trigger: CGTCAGGAACTGTCCTGCCCACTGTGCTTGCAGCTG...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | AAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCCACCAGTTCCTCCAGCGCTaGCATCAGAGCCCGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KHPLPGHPQPEGEALEIHQFLQR*HQSPEH Trigger: ATGTTCCGGGCTCTGATGCCAGCGCTGGAGGAACTG...GTGGATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTATCGGGTGCGCAGAGCTaGGGTCAAAAGTCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPEGEALEIHPHPTHPDLSGAQS*GQKSVP Trigger: AGGAACTGACTTTTGACCCCAGCTCTGCGCACCCGA...TAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | CTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCACAAGCAGCAGGGGCTaGGCATTCTTGCCCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LYKTNTHFLATLSQRVRPTSSRG*AFLPLS Trigger: CGACAAGGGCAAGAATGCCCAGCCCCTGCTGCTTGT...GGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGCACCACACACAAGTGTaGGGTCCTGCTCGCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLHHTQV*GPARSR Trigger: TCTACTGCGAGCAGGACCGCACACTTGTGTGTGGTG...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGACCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTCATGCCTCCTGCAGCTaGATCTTCTGCTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRPNKGGLSDPTAFRTRPHASCS*IFCCGS Trigger: GCTTCCACAGCAGAAGATGCAGCTGCAGGAGGCATG...AGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | GACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCCTCCTTGCGCATGCATaGCTCCTGCAGCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DKHPLPGHPQPEGEALEILLAHA*LLQLHL Trigger: AAGATGCAGCTGCAGGAGGCATGCATGCGCAAGGAG...GATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | CTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCCTCCTTGCGCATGCATaGCTCCTGCAGCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYKTNTHFLATLSQRVRPLLAHA*LLQLHL Trigger: AAGATGCAGCTGCAGGAGGCATGCATGCGCAAGGAG...GGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | AGACCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTCCCCTACAGTCTTCTCCTTaGGCATGCATGCCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPNKGGLSDPTAFRTRPPLQSSP*ACMPPA Trigger: TGCAGGAGGCATGCATGCGCAAGGAGAAGACTGTAG...GGGAGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | GCACCCAGCACCCTCTCAGGACTGCTGGGGGCTTTGAAAAGACAGTTAGATACGGGGGCTGGGCATTCTTaGCCTTGTCGTGCCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: APSTLSGLLGALKRQLDTGAGHS*PCRAST Trigger: TGTGCTGGCACGACAAGGGCAAGAATGCCCAGCCCC...CGTATCTAACTGTCTTTTCAAAGCCCCCAGCAGTCCTGAGAGGGTGCTGGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGACCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTACACTCAGCCGTCACTaGCGCATCGAACAGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRPNKGGLSDPTAFRTRPTLSRH*RIEQLQ Trigger: TTGCAGCTGTTCGATGCGCCAGTGACGGCTGAGTGT...AGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCTATCCCTCACGTCGGTCCCCCTGTGCACCCCAACCTGTGTACTCCCCCCAGGCAGAATTTCATaGGGAATTCTGTCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPLSLTSVPLCTPTCVLPPGRIS*GILSVA Trigger: AGCCACAGACAGAATTCCTCATGAAATTCTGCCTGG...GGGGAGTACACAGGTTGGGGTGCACAGGGGGACCGACGTGAGGGATAGAGGGAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGCCTGCTCGCAGTAGATaGTCAGTGGATCCAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLPARSR*SVDPGV Trigger: AACACCTGGATCCACTGAGCATCTACTGCGAGCAGG...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTATGCAGCTGCATCTTCTaGTGTGGAAGCTGTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPEGEALEIHPHPTHPDLCSCIF*CGSCVL Trigger: CAAGACACAGCTTCCACAGCAGAAGATGCAGCTGCA...TAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGACCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTCTACAGTCTTCTCCTTaGGCATGCATGCCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRPNKGGLSDPTAFRTRPLQSSP*ACMPPA Trigger: TGCAGGAGGCATGCATGCGCAAGGAGAAGACTGTAG...AGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGAGGCCTCTCTGGGGTaGGCAGTGCCCGCGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLIESCWLSTFILLPQPPEASLG*AVPAAP Trigger: AGGAGCCGCGGGCACTGCGCACCCCAGAGAGGCCTC...AGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTATCAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | AAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCCACGCAGTAGATGCTCAGTaGATCCAGGTGTTCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KHPLPGHPQPEGEALEIHAVDAQ*IQVFLA Trigger: TGCGAGGAACACCTGGATCCACTGAGCATCTACTGC...GTGGATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGGAGGAATTCTGTCTGTaGCTTGTCAGCCACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLEEFCL*LVSHLL Trigger: GAGGAGGTGGCTGACAAGCCACAGACAGAATTCCTC...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCGAGATGACAGGCAGCTaGATATCTAGCCTTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EALEIHPHPTHPDLTKVAEMTGS*ISSLAG Trigger: ACCGGCAAGGCTAGATATCCAGCTGCCTGTCATCTC...GGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGACAAGCAGCAGGGGCTaGGCATTCTTGCCCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ELYKTNTHFLATLSQRVRTSSRG*AFLPLS Trigger: CGACAAGGGCAAGAATGCCCAGCCCCTGCTGCTTGT...CCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGCATGCCTCCTGCAGCTaGATCTTCTGCTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PELYKTNTHFLATLSQRVHASCS*IFCCGS Trigger: GCTTCCACAGCAGAAGATGCAGCTGCAGGAGGCATG...CACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGAGTCGCATGCATGCCTCCTaGAGCTGCATCTTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRNPPPPNPSRPNKGGLSRMHAS*SCIFCC Trigger: ACAGCAGAAGATGCAGCTGCAGGAGGCATGCATGCG...ACTCAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGGACAGCTCCCCGGAACTaGCGCACTGTCTCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FDRVLLAFNFHPLASASWTAPRN*RTVSST Trigger: GGTGGAGGAGACAGTGCGCCAGTTCCGGGGAGCTGT...CCAGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTATCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGGAGGAATTCTGTCTGTaGCTTGTCAGCCACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLNSIRQTPTSWPPSARGEEFCL*LVSHLL Trigger: GAGGAGGTGGCTGACAAGCCACAGACAGAATTCCTC...CCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTATCTTCTGCAGCCTGCTaGTTACCAGGCAGAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPEGEALEIHPHPTHPDLSSAAC*LPGRIS Trigger: TGAAATTCTGCCTGGTAACCAGCAGGCTGCAGAAGA...TAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGGAGATGACAGGCAGCTaGATATCTAGCCTTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLNSIRQTPTSWPPSARGEMTGS*ISSLAG Trigger: ACCGGCAAGGCTAGATATCCAGCTGCCTGTCATCTC...CCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGGATGCTGGGATCAGTTCCTCCAGCGCTaGCATCAGAGCCCGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SCWLSTFILLPQPPGCWDQFLQR*HQSPEH Trigger: ATGTTCCGGGCTCTGATGCCAGCGCTGGAGGAACTG...ATCCCAGCATCCAGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCAGCACCCTCTCAGGACTGCTGGGGGCTTTGAAAAGACAGTTAGATACGTCGGGTGCGCAGAGCTaGGGTCAAAAGTCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: APSTLSGLLGALKRQLDTSGAQS*GQKSVP Trigger: AGGAACTGACTTTTGACCCCAGCTCTGCGCACCCGA...CGTATCTAACTGTCTTTTCAAAGCCCCCAGCAGTCCTGAGAGGGTGCTGGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
||
| CDS-3UTR TCA 90 bp | AGACCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTCCCGAATTTGAAGTCATCTaGGATGACAGGCAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPNKGGLSDPTAFRTRPPEFEVI*DDRQLD Trigger: ATCCAGCTGCCTGTCATCTCAGATGACTTCAAATTC...GGGAGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGTTCTTGCCCTTGTCGTaGCAGCACACGTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EGEALEIHPHPTHPDLTKFLPLS*QHTSKM Trigger: CATCTTTGACGTGTGCTGGCACGACAAGGGCAAGAA...CTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGGCAGTAGATGCTCAGTaGATCCAGGTGTTCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELYKTNTHFLATLSQRVRAVDAQ*IQVFLA Trigger: TGCGAGGAACACCTGGATCCACTGAGCATCTACTGC...CCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGCCAGGCAGAATTTCATaGGGAATTCTGTCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLNSIRQTPTSWPPSARGPGRIS*GILSVA Trigger: AGCCACAGACAGAATTCCTCATGAAATTCTGCCTGG...CCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTCCCTCTATCCCTCACGTCGGTCCCCCTGTGCACCCCAACCTGTGTACTCGAATTTGAAGTCATCTaGGATGACAGGCAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IFPLSLTSVPLCTPTCVLEFEVI*DDRQLD Trigger: ATCCAGCTGCCTGTCATCTCAGATGACTTCAAATTC...GAGTACACAGGTTGGGGTGCACAGGGGGACCGACGTGAGGGATAGAGGGAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGTCTTGAGGCGTGCTTaGGCTTCAGCGGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLIESCWLSTFILLPQPPVLRRA*ASAAGR Trigger: CCTGCCTGCCGCTGAAGCCCAAGCACGCCTCAAGAC...AGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTATCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGTACTCCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCATTCTTGCCCTTGTCGTaGCAGCACACGTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LCTPLNSIRQTPTSWPPSFLPLS*QHTSKM Trigger: CATCTTTGACGTGTGCTGGCACGACAAGGGCAAGAA...TGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGGAGTACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTCAGCTGCAAGCACAGTaGGCAGGACAGTTCCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: FLIESCWLSTFILLPQPPQLQAQ*AGQFLT Trigger: CGTCAGGAACTGTCCTGCCCACTGTGCTTGCAGCTG...AGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTATCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGATCTTCTGCAGCCTGCTaGTTACCAGGCAGAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLNSIRQTPTSWPPSARSSAAC*LPGRIS Trigger: TGAAATTCTGCCTGGTAACCAGCAGGCTGCAGAAGA...TCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTACACTCAGCCGTCACTaGCGCATCGAACAGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLIESCWLSTFILLPQPPTLSRH*RIEQLQ Trigger: TTGCAGCTGTTCGATGCGCCAGTGACGGCTGAGTGT...AGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTATCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | GACCATTGTTCCACAGACTTCCCAAGATCCTCCACTAAATCCTTTCCAAATCCTCACCACACACAAGTGTaGGGTCCTGCTCGCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHCSTDFPRSSTKSFPNPHHTQV*GPARSR Trigger: TCTACTGCGAGCAGGACCGCACACTTGTGTGTGGTG...AGGATTTGGAAAGGATTTAGTGGAGGATCTTGGGAAGTCTGTGGAACAATGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS-3UTR GCA 90 bp | GACCATTGTTCCACAGACTTCCCAAGATCCTCCACTAAATCCTTTCCAAATCCTTGCAGCTGCATCTTCTaGTGTGGAAGCTGTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DHCSTDFPRSSTKSFPNPCSCIF*CGSCVL Trigger: CAAGACACAGCTTCCACAGCAGAAGATGCAGCTGCA...AGGATTTGGAAAGGATTTAGTGGAGGATCTTGGGAAGTCTGTGGAACAATGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS GCA 90 bp | CGAAGCTTAGGTAGAGGCCAATGCGCGCCGGAGGCCTCTCTGGGGTaGGCAGTGCCCGCGGCTCCTTGGCCTCCACGTGCGCCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSLGRGQCAPEASLG*AVPAAPWPPRAPPG Trigger: TCCTGGAGGCGCACGTGGAGGCCAAGGAGCCGCGGGCACTGCGCACCCCAGAGAGGCCTCCGGCGCGCATTGGCCTCTACCTAAGCTTCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS TCA 90 bp | GTCGAACTGACGCGTGTCTTCTCCCGCTGGCGGCGCCTTCTGGTCTaGGCACTCCACTCGGCGACCAGAGGAGGACACCACCAGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VELTRVFSRWRRLLV*ALHSATRGGHHQAR Trigger: CCGAGCCTGGTGGTGTCCTCCTCTGGTCGCCGAGTGGAGTGCTCAGACCAGAAGGCGCCGCCAGCGGGAGAAGACACGCGTCAGTTCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 90 bp | GCAGGCTCCCCTGCCACCCGGATCAGGCAGGCACGGCAGAAACTGTaGCCACACTCAGCCGTCACTGGCGCATCGAACAGCTGCAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGSPATRIRQARQKL*PHSAVTGASNSCKH Trigger: GTGCTTGCAGCTGTTCGATGCGCCAGTGACGGCTGAGTGTGGCCACAGTTTCTGCCGTGCCTGCCTGATCCGGGTGGCAGGGGAGCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 90 bp | CTCGGCGACCAGAGGAGGACACCACCAGGCTCGGGTGCGCAGAGCTaGGGTCAAAAGTCAGTTCCTCCAGCGCTGGCATCAGAGCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGDQRRTPPGSGAQS*GQKSVPPALASEPG Trigger: TCCGGGCTCTGATGCCAGCGCTGGAGGAACTGACTTTTGACCCCAGCTCTGCGCACCCGAGCCTGGTGGTGTCCTCCTCTGGTCGCCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS TCA 90 bp | TGTGACAGCAGCTGCTGCGCCACCACCGCTACTGCCTTGTCGAACTaGCGCGTGTCTTCTCCCGCTGGCGGCGCCTTCTGGTCTGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CDSSCCATTATALSN*RVSSPAGGAFWSEH Trigger: GTGCTCAGACCAGAAGGCGCCGCCAGCGGGAGAAGACACGCGTCAGTTCGACAAGGCAGTAGCGGTGGTGGCGCAGCAGCTGCTGTCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | GAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGAGTGCCCGCGGCTCCTaGGCCTCCACGTGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGEALEIHPHPTHPDLTKSARGS*ASTCAS Trigger: GGAGGCGCACGTGGAGGCCAAGGAGCCGCGGGCACT...CTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 90 bp | GCCACACTCAGCCGTCACTGGCGCATCGAACAGCTGCAAGCACAGTaGGCAGGACAGTTCCTGACGCAGAAGGCCGGGTGCAGCCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: ATLSRHWRIEQLQAQ*AGQFLTQKAGCSRH Trigger: ATGTCGGCTGCACCCGGCCTTCTGCGTCAGGAACTGTCCTGCCCACTGTGCTTGCAGCTGTTCGATGCGCCAGTGACGGCTGAGTGTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGAGGGCCCAGCGTGGTTaGTCGCCCACCTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLRAQRG*SPTSTS Trigger: GGAGGTGGAGGTGGGCGACAAACCACGCTGGGCCCT...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTCTATCCCTCACGTCGGTCCCCCTGTGCACCCCAACCTGTGTACTCCCCAGGGGCTGGGCATTCTaGCCCTTGTCGTGCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FPLSLTSVPLCTPTCVLPRGWAF*PLSCQH Trigger: GTGCTGGCACGACAAGGGCAAGAATGCCCAGCCCCT...GGGGAGTACACAGGTTGGGGTGCACAGGGGGACCGACGTGAGGGATAGAGGGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | CAGCCAGAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTATTCCTCGCAGTGGCCTaGGGGCACTTGCGCCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: QPEGEALEIHPHPTHPDLFLAVA*GHLRQT Trigger: GGTTTGGCGCAAGTGCCCCAAGGCCACTGCGAGGAA...TAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | ACTCCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAAGTGCCCGCGGCTCCTaGGCCTCCACGTGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPLNSIRQTPTSWPPSARSARGS*ASTCAS Trigger: GGAGGCGCACGTGGAGGCCAAGGAGCCGCGGGCACT...TCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | GACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGCCCTAGAAATCTGTCTTGAGGCGTGCTaGGGCTTCAGCGGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DKHPLPGHPQPEGEALEICLEAC*GFSGRQ Trigger: CTGCCTGCCGCTGAAGCCCAAGCACGCCTCAAGACA...GATTTCTAGGGCCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGAGGGGCTGGGCATTCTaGCCCTTGTCGTGCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLRGWAF*PLSCQH Trigger: GTGCTGGCACGACAAGGGCAAGAATGCCCAGCCCCT...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 90 bp | CACACCACACACAAGTGTGCGGTCCTGCTCGCAGTAGATGCTCAGTaGATCCAGGTGTTCCTCGCAGTGGCCTTGGGGCACTTGCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HTTHKCAVLLAVDAQ*IQVFLAVALGHLRQ Trigger: TTGGCGCAAGTGCCCCAAGGCCACTGCGAGGAACACCTGGATCCACTGAGCATCTACTGCGAGCAGGACCGCACACTTGTGTGTGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 90 bp | GGGGCTGGGCATTCTTGCCCTTGTCGTGCCAGCACACGTCAAAGATaGGGTACACCGGCCCGGGCAGACGCTCGTGGAAAGAAAAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: GAGHSCPCRASTRQR*GTPARADARGKKRL Trigger: CAATCTTTTCTTTCCACGAGCGTCTGCCCGGGCCGGTGTACCCCATCTTTGACGTGTGCTGGCACGACAAGGGCAAGAATGCCCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | GAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGTTCCTCGCAGTGGCCTaGGGGCACTTGCGCCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: EGEALEIHPHPTHPDLTKFLAVA*GHLRQT Trigger: GGTTTGGCGCAAGTGCCCCAAGGCCACTGCGAGGAA...CTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | CAGCCAGAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAGCTACAGTCTTCTCCTaGCGCATGCATGCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QPEGEALEIHPHPTHPDLATVFS*RMHASC Trigger: GCAGGAGGCATGCATGCGCAAGGAGAAGACTGTAGC...TAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | AGACCTAACAAAGGTGGCCTGAGTGATCCCACCGCCTTCAGGACCAGGCCTCCCGGTAAGAGTTCAGGCTaGACAGCTCCCGACGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPNKGGLSDPTAFRTRPPGKSSG*TAPDAR Trigger: CCTTGCGTCGGGAGCTGTCAAGCCTGAACTCTTACC...GGGAGGCCTGGTCCTGAAGGCGGTGGGATCACTCAGGCCACCTTTGTTAGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | CAGCCAGAGGGTGAGGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAGCTGGATATCTAGCCTaGCCGGTGGTGGTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPEGEALEIHPHPTHPDLAGYLA*PVVVTL Trigger: CAGAGTCACCACCACCGGCAAGGCTAGATATCCAGC...TAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCCTCACCCTCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 90 bp | AGGCACACACACCACACACAAGTGTGCGGTCCTGCTCGCAGTAGATaGTCAGTGGATCCAGGTGTTCCTCGCAGTGGCCTTGGGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RHTHHTQVCGPARSR*SVDPGVPRSGLGAL Trigger: AAGTGCCCCAAGGCCACTGCGAGGAACACCTGGATCCACTGAGCATCTACTGCGAGCAGGACCGCACACTTGTGTGTGGTGTGTGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 90 bp | GACCACGGTGAGAACCGAGCGAGGCACACACACCACACACAAGTGTaGGGTCCTGCTCGCAGTAGATGCTCAGTGGATCCAGGTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DHGENRARHTHHTQV*GPARSRCSVDPGVP Trigger: AGGAACACCTGGATCCACTGAGCATCTACTGCGAGCAGGACCGCACACTTGTGTGTGGTGTGTGTGCCTCGCTCGGTTCTCACCGTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | ATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGGATGCAGGGCCCAGCGTGGTTaGTCGCCCACCTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IESCWLSTFILLPQPPGCRAQRG*SPTSTS Trigger: GGAGGTGGAGGTGGGCGACAAACCACGCTGGGCCCT...GCATCCAGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS GCA 90 bp | ATGCTCAGTGGATCCAGGTGTTCCTCGCAGTGGCCTTGGGGCACTTaGGCCAAACCCTCCACAAGGCGTGACAACTGGAGGTTAGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MLSGSRCSSQWPWGT*AKPSTRRDNWRLVL Trigger: AAGCACTAACCTCCAGTTGTCACGCCTTGTGGAGGGTTTGGCGCAAGTGCCCCAAGGCCACTGCGAGGAACACCTGGATCCACTGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 90 bp | AGCACCGCTACAGTCTTCTCCTTGCGCATGCATGCCTCCTGCAGCTaGATCTTCTGCTGTGGAAGCTGTGTCTTGAGGCGTGCTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STATVFSLRMHASCS*IFCCGSCVLRRAWA Trigger: AGCCCAAGCACGCCTCAAGACACAGCTTCCACAGCAGAAGATGCAGCTGCAGGAGGCATGCATGCGCAAGGAGAAGACTGTAGCGGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 90 bp | TGCTCCAGCACCGCTACAGTCTTCTCCTTGCGCATGCATGCCTCCTaGAGCTGCATCTTCTGCTGTGGAAGCTGTGTCTTGAGGCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSTATVFSLRMHAS*SCIFCCGSCVLRRA Trigger: AGCACGCCTCAAGACACAGCTTCCACAGCAGAAGATGCAGCTGCAGGAGGCATGCATGCGCAAGGAGAAGACTGTAGCGGTGCTGGAGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 90 bp | CCACCAGCTGATGCTCCAGCACCGCTACAGTCTTCTCCTTGCGCATaGATGCCTCCTGCAGCTGCATCTTCTGCTGTGGAAGCTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPADAPAPLQSSPCA*MPPAAASSAVEAVS Trigger: AGACACAGCTTCCACAGCAGAAGATGCAGCTGCAGGAGGCATGCATGCGCAAGGAGAAGACTGTAGCGGTGCTGGAGCATCAGCTGGTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | GAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGAGGGTGAGGGCTGGATATCTAGCCTaGCCGGTGGTGGTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELYKTNTHFLATLSQRVRAGYLA*PVVVTL Trigger: CAGAGTCACCACCACCGGCAAGGCTAGATATCCAGC...CCTCACCCTCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | TCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTGGATGCTGGGATGGTAAGAGTTCAGGCTaGACAGCTCCCGACGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCWLSTFILLPQPPGCWDGKSSG*TAPDAR Trigger: CCTTGCGTCGGGAGCTGTCAAGCCTGAACTCTTACC...ATCCCAGCATCCAGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | ACTCCCCTGAACTCTATAAGACAAACACCCACTTCCTGGCCACCCTCAGCCAGATGGGCATTCTTGCCCTaGTCGTGCCAGCACACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPLNSIRQTPTSWPPSARWAFLP*SCQHTS Trigger: TGACGTGTGCTGGCACGACAAGGGCAAGAATGCCCA...TCTGGCTGAGGGTGGCCAGGAAGTGGGTGTTTGTCTTATAGAGTTCAGGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS TCA 90 bp | CTGACAGGATCTTCTGCAGCCTGCTGGTTACCAGGCAGAATTTCATaGGGAATTCTGTCTGTGGCTTGTCAGCCACCTCCTCCAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LTGSSAACWLPGRIS*GILSVACQPPPPAP Trigger: AGGTGCTGGAGGAGGTGGCTGACAAGCCACAGACAGAATTCCTCATGAAATTCTGCCTGGTAACCAGCAGGCTGCAGAAGATCCTGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTTGTCTTGAGGCGTGCTaGGGCTTCAGCGGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLIESCWLSTFILLPQPPCLEAC*GFSGRQ Trigger: CTGCCTGCCGCTGAAGCCCAAGCACGCCTCAAGACA...AGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTATCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | GGCCCTAGAAATCCACCCCCACCCAACCCATCCAGACCTAACAAAGGTGGCCTGTTCCACACCTGGAATTaGAAGTCATCTGAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: GPRNPPPPNPSRPNKGGLFHTWN*KSSEMT Trigger: TGTCATCTCAGATGACTTCAAATTCCAGGTGTGGAA...CAGGCCACCTTTGTTAGGTCTGGATGGGTTGGGTGGGGGTGGATTTCTAGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 90 bp | TGGATATCTAGCCTTGCCGGTGGTGGTGACTCTGACAGGATCTTCTaGAGCCTGCTGGTTACCAGGCAGAATTTCATGAGGAATTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WISSLAGGGDSDRIF*SLLVTRQNFMRNSV Trigger: GACAGAATTCCTCATGAAATTCTGCCTGGTAACCAGCAGGCTGCAGAAGATCCTGTCAGAGTCACCACCACCGGCAAGGCTAGATATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | GTTCCACAGACTTCCCAAGATCCTCCACTAAATCCTTTCCAAATCCTATCCTCTTGGGCATTCTTGCCCTaGTCGTGCCAGCACACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VPQTSQDPPLNPFQILSSWAFLP*SCQHTS Trigger: TGACGTGTGCTGGCACGACAAGGGCAAGAATGCCCA...AGAGGATAGGATTTGGAAAGGATTTAGTGGAGGATCTTGGGAAGTCTGTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGATAGAGTCCTGCTGGCTTTCAACTTTCATCCTCTTGCCTCAGCCTCCTTTCCACACCTGGAATTaGAAGTCATCTGAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: FLIESCWLSTFILLPQPPFHTWN*KSSEMT Trigger: TGTCATCTCAGATGACTTCAAATTCCAGGTGTGGAA...AGGAGGCTGAGGCAAGAGGATGAAAGTTGAAAGCCAGCAGGACTCTATCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106248.8 |
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| CDS GCA 72 bp | GGTAGAGGCCAATGCGCGCCGGAGGCCTCTCTGGGGTaGGCAGTGCCCGCGGCTCCTTGGCCTCCACGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GRGQCAPEASLG*AVPAAPWPPRA Trigger: CGCACGTGGAGGCCAAGGAGCCGCGGGCACTGCGCACCCCAGAGAGGCCTCCGGCGCGCATTGGCCTCTACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | GCGGCTCCTTGGCCTCCACGTGCGCCTCCAGGATCTTaGCATCGCGCAGACCCAGCAGCCACAGCCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AAPWPPRAPPGS*HRADPAATAPV Trigger: CACAGGGGCTGTGGCTGCTGGGTCTGCGCGATGGCAAGATCCTGGAGGCGCACGTGGAGGCCAAGGAGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CAA 72 bp | CGCGGCTCCTTGGCCTCCACGTGCGCCTCCAGGATCTaGCCATCGCGCAGACCCAGCAGCCACAGCCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGSLASTCASRI*PSRRPSSHSPC Trigger: ACAGGGGCTGTGGCTGCTGGGTCTGCGCGATGGCAAGATCCTGGAGGCGCACGTGGAGGCCAAGGAGCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | GGGACAGGCAACTGTGCCGTCCGCAGCAGGCTCCCCTaGCACCCGGATCAGGCAGGCACGGCAGAAACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTGNCAVRSRLP*HPDQAGTAETV Trigger: CACAGTTTCTGCCGTGCCTGCCTGATCCGGGTGGCAGGGGAGCCTGCTGCGGACGGCACAGTTGCCTGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS GCA 72 bp | CCAGGACGCCATCTGCGAAGCTTAGGTAGAGGCCAATaGGCGCCGGAGGCCTCTCTGGGGTGCGCAGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRHLRSLGRGQ*APEASLGCAVP Trigger: GGGCACTGCGCACCCCAGAGAGGCCTCCGGCGCGCATTGGCCTCTACCTAAGCTTCGCAGATGGCGTCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
||
| CDS TCA 72 bp | ACGCGTGTCTTCTCCCGCTGGCGGCGCCTTCTGGTCTaGGCACTCCACTCGGCGACCAGAGGAGGACACCAC | + |
|
Preference number: 6 (lower is better) Translates to: TRVFSRWRRLLV*ALHSATRGGHH Trigger: GTGGTGTCCTCCTCTGGTCGCCGAGTGGAGTGCTCAGACCAGAAGGCGCCGCCAGCGGGAGAAGACACGCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS TCA 72 bp | AGCTGCTGCGCCACCACCGCTACTGCCTTGTCGAACTaGCGCGTGTCTTCTCCCGCTGGCGGCGCCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SCCATTATALSN*RVSSPAGGAFW Trigger: CCAGAAGGCGCCGCCAGCGGGAGAAGACACGCGTCAGTTCGACAAGGCAGTAGCGGTGGTGGCGCAGCAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | CCTGCCACCCGGATCAGGCAGGCACGGCAGAAACTGTaGCCACACTCAGCCGTCACTGGCGCATCGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: PATRIRQARQKL*PHSAVTGASNS Trigger: GCTGTTCGATGCGCCAGTGACGGCTGAGTGTGGCCACAGTTTCTGCCGTGCCTGCCTGATCCGGGTGGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | GCCTGTTCCTGCTCCGGCCCCACAAGCAGCAGGGGCTaGGCATTCTTGCCCTTGTCGTGCCAGCACACGTCA | + |
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Preference number: 6 (lower is better) Translates to: ACSCSGPTSSRG*AFLPLSCQHTS Trigger: TGACGTGTGCTGGCACGACAAGGGCAAGAATGCCCAGCCCCTGCTGCTTGTGGGGCCGGAGCAGGAACAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | AGCCGTCACTGGCGCATCGAACAGCTGCAAGCACAGTaGGCAGGACAGTTCCTGACGCAGAAGGCCGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SRHWRIEQLQAQ*AGQFLTQKAGC Trigger: GCACCCGGCCTTCTGCGTCAGGAACTGTCCTGCCCACTGTGCTTGCAGCTGTTCGATGCGCCAGTGACGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CAA 72 bp | TGCTCCGGCCCCACAAGCAGCAGGGGCTGGGCATTCTaGCCCTTGTCGTGCCAGCACACGTCAAAGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: CSGPTSSRGWAF*PLSCQHTSKMG Trigger: CCCCATCTTTGACGTGTGCTGGCACGACAAGGGCAAGAATGCCCAGCCCCTGCTGCTTGTGGGGCCGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | ACAAGCAGCAGGGGCTGGGCATTCTTGCCCTTGTCGTaGCAGCACACGTCAAAGATGGGGTACACCGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TSSRGWAFLPLS*QHTSKMGYTGP Trigger: CGGGCCGGTGTACCCCATCTTTGACGTGTGCTGGCACGACAAGGGCAAGAATGCCCAGCCCCTGCTGCTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | GGCACGGCAGAAACTGTGGCCACACTCAGCCGTCACTaGCGCATCGAACAGCTGCAAGCACAGTGGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GTAETVATLSRH*RIEQLQAQWAG Trigger: TCCTGCCCACTGTGCTTGCAGCTGTTCGATGCGCCAGTGACGGCTGAGTGTGGCCACAGTTTCTGCCGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | CAGAGGAGGACACCACCAGGCTCGGGTGCGCAGAGCTaGGGTCAAAAGTCAGTTCCTCCAGCGCTGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: QRRTPPGSGAQS*GQKSVPPALAS Trigger: TGATGCCAGCGCTGGAGGAACTGACTTTTGACCCCAGCTCTGCGCACCCGAGCCTGGTGGTGTCCTCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | ATGCTCAGTGGATCCAGGTGTTCCTCGCAGTGGCCTTaGGGCACTTGCGCCAAACCCTCCACAAGGCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: MLSGSRCSSQWP*GTCAKPSTRRD Trigger: GTCACGCCTTGTGGAGGGTTTGGCGCAAGTGCCCCAAGGCCACTGCGAGGAACACCTGGATCCACTGAGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | CACAAGTGTGCGGTCCTGCTCGCAGTAGATGCTCAGTaGATCCAGGTGTTCCTCGCAGTGGCCTTGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: HKCAVLLAVDAQ*IQVFLAVALGH Trigger: GTGCCCCAAGGCCACTGCGAGGAACACCTGGATCCACTGAGCATCTACTGCGAGCAGGACCGCACACTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | CATTCTTGCCCTTGTCGTGCCAGCACACGTCAAAGATaGGGTACACCGGCCCGGGCAGACGCTCGTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: HSCPCRASTRQR*GTPARADARGK Trigger: CTTTCCACGAGCGTCTGCCCGGGCCGGTGTACCCCATCTTTGACGTGTGCTGGCACGACAAGGGCAAGAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | GGCACTTGCGCCAAACCCTCCACAAGGCGTGACAACTaGAGGTTAGTGCTTAGAGCCTGCGGCCGTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GTCAKPSTRRDN*RLVLRACGRVG Trigger: ACCTACACGGCCGCAGGCTCTAAGCACTAACCTCCAGTTGTCACGCCTTGTGGAGGGTTTGGCGCAAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | CACCACACACAAGTGTGCGGTCCTGCTCGCAGTAGATaGTCAGTGGATCCAGGTGTTCCTCGCAGTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: HHTQVCGPARSR*SVDPGVPRSGL Trigger: AAGGCCACTGCGAGGAACACCTGGATCCACTGAGCATCTACTGCGAGCAGGACCGCACACTTGTGTGTGGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | GAGAACCGAGCGAGGCACACACACCACACACAAGTGTaGGGTCCTGCTCGCAGTAGATGCTCAGTGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: ENRARHTHHTQV*GPARSRCSVDP Trigger: TGGATCCACTGAGCATCTACTGCGAGCAGGACCGCACACTTGTGTGTGGTGTGTGTGCCTCGCTCGGTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | CTCCAGCACCGCTACAGTCTTCTCCTTGCGCATGCATaGCTCCTGCAGCTGCATCTTCTGCTGTGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LQHRYSLLLAHA*LLQLHLLLWKL Trigger: CAGCTTCCACAGCAGAAGATGCAGCTGCAGGAGGCATGCATGCGCAAGGAGAAGACTGTAGCGGTGCTGGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CCA 72 bp | CACCGGCCCGGGCAGACGCTCGTGGAAAGAAAAGATTaGCGTAAGTACGTCGGGGTTGCTCGCATCATAGAA | + |
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Preference number: 6 (lower is better) Translates to: HRPGQTLVERKD*RKYVGVARIIE Trigger: TTCTATGATGCGAGCAACCCCGACGTACTTACGCCAATCTTTTCTTTCCACGAGCGTCTGCCCGGGCCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | ACAGTCTTCTCCTTGCGCATGCATGCCTCCTGCAGCTaGATCTTCTGCTGTGGAAGCTGTGTCTTGAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: TVFSLRMHASCS*IFCCGSCVLRR Trigger: ACGCCTCAAGACACAGCTTCCACAGCAGAAGATGCAGCTGCAGGAGGCATGCATGCGCAAGGAGAAGACTGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | ACCGCTACAGTCTTCTCCTTGCGCATGCATGCCTCCTaGAGCTGCATCTTCTGCTGTGGAAGCTGTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TATVFSLRMHAS*SCIFCCGSCVL Trigger: CAAGACACAGCTTCCACAGCAGAAGATGCAGCTGCAGGAGGCATGCATGCGCAAGGAGAAGACTGTAGCGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS GCA 72 bp | AGCCTTGCCGGTGGTGGTGACTCTGACAGGATCTTCTaGAGCCTGCTGGTTACCAGGCAGAATTTCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLAGGGDSDRIF*SLLVTRQNFMR Trigger: CCTCATGAAATTCTGCCTGGTAACCAGCAGGCTGCAGAAGATCCTGTCAGAGTCACCACCACCGGCAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS CAA 90 bp | AGCGCTGGCATCAGAGCCCGGAACATCTTCTTCCACACCTGGAATTaGAAGTCATCTGAGATGACAGGCAGCTGGATATCTAGCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SAGIRARNIFFHTWN*KSSEMTGSWISSLA Trigger: GGCAAGGCTAGATATCCAGCTGCCTGTCATCTCAGATGACTTCAAATTCCAGGTGTGGAAGAAGATGTTCCGGGCTCTGATGCCAGCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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| CDS TCA 72 bp | TCTTCTGCAGCCTGCTGGTTACCAGGCAGAATTTCATaGGGAATTCTGTCTGTGGCTTGTCAGCCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSAACWLPGRIS*GILSVACQPPP Trigger: AGGAGGTGGCTGACAAGCCACAGACAGAATTCCTCATGAAATTCTGCCTGGTAACCAGCAGGCTGCAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081042.6 ENSMUST00000106248.8 |
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