Pregenerated sensors for TRIM71 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079259Ensembl transcript IDs: ENSMUST00000111816.3
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GTCGTAGCTCACACAGGCAAACTGAGCATCCCAAAGCAATTCGACTaGGCCCTTATCCTGTCCCCACCGCCTCTTCCTCTGTGGAGTTCC | + |
Preference number: 1 (lower is better) Translates to: VVAHTGKLSIPKQFD*ALILSPPPLPLWSS Trigger: GGAACTCCACAGAGGAAGAGGCGGTGGGGACAGGATAAGGGCTCAGTCGAATTGCTTTGGGATGCTCAGTTTGCCTGTGTGAGCTACGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR GCA 90 bp | TTGGCTCAATCTACAAAATGCATGCACCCCACCATATGCTTCCAGTaGCCTCAAGGTTGCAGGACCGCTGTCCTGTGCCTCCTAGGCCTT | + |
Preference number: 1 (lower is better) Translates to: LAQSTKCMHPTICFQ*PQGCRTAVLCLLGL Trigger: AAGGCCTAGGAGGCACAGGACAGCGGTCCTGCAACCTTGAGGGCACTGGAAGCATATGGTGGGGTGCATGCATTTTGTAGATTGAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR GCA 90 bp | TGGGTTTCCTTGGCTCAATCTACAAAATGCATGCACCCCACCATATaGTTCCAGTGCCCTCAAGGTTGCAGGACCGCTGTCCTGTGCCTC | + |
Preference number: 1 (lower is better) Translates to: WVSLAQSTKCMHPTI*FQCPQGCRTAVLCL Trigger: GAGGCACAGGACAGCGGTCCTGCAACCTTGAGGGCACTGGAAGCATATGGTGGGGTGCATGCATTTTGTAGATTGAGCCAAGGAAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | CCGGTCACTGTAGACGGGCTACACCGCCGTGACGGGAGATTCTGCTaGGCACAGACAGCTTCAAATACAATCATGAAGTCAGAGACTCTC | + |
Preference number: 1 (lower is better) Translates to: PVTVDGLHRRDGRFC*AQTASNTIMKSETL Trigger: GAGAGTCTCTGACTTCATGATTGTATTTGAAGCTGTCTGTGCCCAGCAGAATCTCCCGTCACGGCGGTGTAGCCCGTCTACAGTGACCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR GCA 90 bp | TCACCGGTCACTGTAGACGGGCTACACCGCCGTGACGGGAGATTCTaGTGGGCACAGACAGCTTCAAATACAATCATGAAGTCAGAGACT | + |
Preference number: 1 (lower is better) Translates to: SPVTVDGLHRRDGRF*WAQTASNTIMKSET Trigger: AGTCTCTGACTTCATGATTGTATTTGAAGCTGTCTGTGCCCAGCAGAATCTCCCGTCACGGCGGTGTAGCCCGTCTACAGTGACCGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | CACGGTGTCTCCTTCCTGAATCTCTTTCCTGTCGTACCTCAGAACTaGCTGCAGGTGCTCACCAAACATGGCTGGTGTCATGATATGGAT | + |
Preference number: 1 (lower is better) Translates to: HGVSFLNLFPVVPQN*LQVLTKHGWCHDMD Trigger: ATCCATATCATGACACCAGCCATGTTTGGTGAGCACCTGCAGCCAGTTCTGAGGTACGACAGGAAAGAGATTCAGGAAGGAGACACCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | GCAACCAGGTGGTTAATACTCAAACTTAAGAAACTTCACTTCCAATaGGAATCTCCTGGTACCCACCCTCACCAGCTCCTGCCAGCTCCT | + |
Preference number: 1 (lower is better) Translates to: ATRWLILKLKKLHFQ*ESPGTHPHQLLPAP Trigger: AGGAGCTGGCAGGAGCTGGTGAGGGTGGGTACCAGGAGATTCCCATTGGAAGTGAAGTTTCTTAAGTTTGAGTATTAACCACCTGGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | CCTCTTCCTCTGTGGAGTTCCTGCCGTGCAATGGGGGTCAGAAACTaGGTTTTAGATCTATGTTGGGCAGTCTTCTGTCCTCTTTCAAAT | + |
Preference number: 1 (lower is better) Translates to: PLPLWSSCRAMGVRN*VLDLCWAVFCPLSN Trigger: ATTTGAAAGAGGACAGAAGACTGCCCAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAACTCCACAGAGGAAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | AGAACTGGCTGCAGGTGCTCACCAAACATGGCTGGTGTCATGATATaGATCAGTCCATATCAAGGTACACTCTCCAAAGTGCTTAGCACC | + |
Preference number: 1 (lower is better) Translates to: RTGCRCSPNMAGVMI*ISPYQGTLSKVLST Trigger: GGTGCTAAGCACTTTGGAGAGTGTACCTTGATATGGACTGATCCATATCATGACACCAGCCATGTTTGGTGAGCACCTGCAGCCAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | AGAAGGCCCACTCTGTGGCTTACAATACATCAGACTTCAATGGGATaGGAGCCACAGGCCCCCAAGTTTCTATTCTTTGGTACAGGTTTT | + |
Preference number: 1 (lower is better) Translates to: RRPTLWLTIHQTSMG*EPQAPKFLFFGTGF Trigger: AAAACCTGTACCAAAGAATAGAAACTTGGGGGCCTGTGGCTCCCATCCCATTGAAGTCTGATGTATTGTAAGCCACAGAGTGGGCCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR TCA 90 bp | TTATTCAAGGTCAAACGTTTGTCTAAGAAATCAATCCTGCATCCCTaGACATCCCTGCATCTAGAGAGGGTCTCCCACATCCACACCCTC | + |
Preference number: 1 (lower is better) Translates to: LFKVKRLSKKSILHP*TSLHLERVSHIHTL Trigger: GAGGGTGTGGATGTGGGAGACCCTCTCTAGATGCAGGGATGTTCAGGGATGCAGGATTGATTTCTTAGACAAACGTTTGACCTTGAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR TCA 90 bp | GGGAAAGCCAGACTGGCTGAGAACTACTTGGGTGAACGACGACACTaGCCAGACAGCTCTTATTCAAGGTCAAACGTTTGTCTAAGAAAT | + |
Preference number: 1 (lower is better) Translates to: GKARLAENYLGERRH*PDSSYSRSNVCLRN Trigger: ATTTCTTAGACAAACGTTTGACCTTGAATAAGAGCTGTCTGGTCAGTGTCGTCGTTCACCCAAGTAGTTCTCAGCCAGTCTGGCTTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR TCA 90 bp | GTGACGGGAGATTCTGCTGGGCACAGACAGCTTCAAATACAATCATaGAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTCCCA | + |
Preference number: 1 (lower is better) Translates to: VTGDSAGHRQLQIQS*SQRLSFPSNTSCFP Trigger: TGGGAAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGAAGCTGTCTGTGCCCAGCAGAATCTCCCGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | CCCACACTGGTCTATCCATGTACTGATCAAGACCCAACCACAAGATaGGAACCTGGGCCGAGTTATCAGATCCTAAGTAAAATGTCAAGT | + |
Preference number: 1 (lower is better) Translates to: PTLVYPCTDQDPTTR*EPGPSYQILSKMSS Trigger: ACTTGACATTTTACTTAGGATCTGATAACTCGGCCCAGGTTCCCATCTTGTGGTTGGGTCTTGATCAGTACATGGATAGACCAGTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | AACCAAGATAAGGAGTTACCTGCCAGCCATAACGGAGTACAGGTTTaGAGACTTCTCATGAACAAAAGTGATAGATTGGTGATGACCTTC | + |
Preference number: 1 (lower is better) Translates to: NQDKELPASHNGVQV*RLLMNKSDRLVMTF Trigger: GAAGGTCATCACCAATCTATCACTTTTGTTCATGAGAAGTCTCCAAACCTGTACTCCGTTATGGCTGGCAGGTAACTCCTTATCTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CCA 90 bp | GCTGCTTCAAGCTTAAAAGACTTCCCAACTCAAATGATTAAGCTTTaGCTTAACTACACCGAGACACTCTGGACCATCCAAAGTGTCTTC | + |
Preference number: 1 (lower is better) Translates to: AASSLKDFPTQMIKL*LNYTETLWTIQSVF Trigger: GAAGACACTTTGGATGGTCCAGAGTGTCTCGGTGTAGTTAAGCCAAAGCTTAATCATTTGAGTTGGGAAGTCTTTTAAGCTTGAAGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR GCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTGCTCCTGCCAGCTCCTaGCAGTTCCTGCCAGCCCCT | + |
Preference number: 2 (lower is better) Translates to: STSKRVAARGANIQPVCSAPASS*QFLPAP Trigger: AGGGGCTGGCAGGAACTGGCAGGAGCTGGCAGGAGC...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR GCA 90 bp | GACCATCCAAAGTGTCTTCATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTGCTCCTGCCAGTTCCTaGCAGCCCCTGCCACCTGAC | + |
Preference number: 2 (lower is better) Translates to: DHPKCLHPGSLYGPTLSSAPASS*QPLPPD Trigger: GTCAGGTGGCAGGGGCTGGCAGGAACTGGCAGGAGC...ACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGATGAAGACACTTTGGATGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTGGAGGGAAGAGGATGTaGGCCAAGAGGCTTGCCAGA | + |
Preference number: 2 (lower is better) Translates to: STSKRVAARGANIQPVCSGGKRM*AKRLAR Trigger: TCTGGCAAGCCTCTTGGCTCACATCCTCTTCCCTCC...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | GTGGAGTTCCTGCCGTGCAATGGGGGTCAGAAACTGGGTTTTAGATCTATGTTGGGTCCCCCGCCCTCCTaGACAGTCCCTGATGTGGGG | + |
Preference number: 2 (lower is better) Translates to: VEFLPCNGGQKLGFRSMLGPPPS*TVPDVG Trigger: CCCCACATCAGGGACTGTTCAGGAGGGCGGGGGACC...CAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAACTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGCCAAGGGTTAGGGAGTaGGGTGCTCCCACCAGTCAG | + |
Preference number: 2 (lower is better) Translates to: IPAASMAQHCPVLFRVPLPRVRE*GAPTSQ Trigger: CTGACTGGTGGGAGCACCTCACTCCCTAACCCTTGG...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | CTACCGCTGTCTGCGGAACAGGATTTGTGGCAGGGAAAGCCAGACTGGCTGAGACAGACTTCAATGGGATaGGAGCCACAGGCCCCCAAG | + |
Preference number: 2 (lower is better) Translates to: LPLSAEQDLWQGKPDWLRQTSMG*EPQAPK Trigger: CTTGGGGGCCTGTGGCTCCCATCCCATTGAAGTCTG...TCTCAGCCAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CAA 90 bp | TACAAAATGCATGCACCCCACCATATGCTTCCAGTGCCCTCAAGGTaGCAGGACCGCTGTCCTGTGCCTCCTAGGCCTTCAGGAGGGAAG | + |
Preference number: 2 (lower is better) Translates to: YKMHAPHHMLPVPSR*QDRCPVPPRPSGGK Trigger: CTTCCCTCCTGAAGGCCTAGGAGGCACAGGACAGCGGTCCTGCAACCTTGAGGGCACTGGAAGCATATGGTGGGGTGCATGCATTTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTACCCTGGTCCACATCTaGAAAGCCCCTCTCTCTCTG | + |
Preference number: 2 (lower is better) Translates to: STSKRVAARGANIQPVCSTLVHI*KAPLSL Trigger: CAGAGAGAGAGGGGCTTTTCAGATGTGGACCAGGGT...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGGCCACAGGAGAGCTGTaGGGAGGAACACTGAACATG | + |
Preference number: 2 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLATGEL*GGTLNM Trigger: CATGTTCAGTGTTCCTCCTCACAGCTCTCCTGTGGC...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR GCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGGTGGAGTTCCTGCCGTaGAATGGGGGTCAGAAACTG | + |
Preference number: 2 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLVEFLP*NGGQKL Trigger: CAGTTTCTGACCCCCATTGCACGGCAGGAACTCCAC...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | CTACCGCTGTCTGCGGAACAGGATTTGTGGCAGGGAAAGCCAGACTGGCTGAGAGTTCCTGCCGTGCAATaGGGGTCAGAAACTGGGTTT | + |
Preference number: 2 (lower is better) Translates to: LPLSAEQDLWQGKPDWLRVPAVQ*GSETGF Trigger: AAACCCAGTTTCTGACCCCCATTGCACGGCAGGAAC...TCTCAGCCAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTGTCGTACCTCAGAACTaGCTGCAGGTGCTCACCAAA | + |
Preference number: 2 (lower is better) Translates to: STSKRVAARGANIQPVCSVVPQN*LQVLTK Trigger: TTTGGTGAGCACCTGCAGCCAGTTCTGAGGTACGAC...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGCCAAAGCAATTCGACTaGGCCCTTATCCTGTCCCCA | + |
Preference number: 2 (lower is better) Translates to: IPAASMAQHCPVLFRVPLPKQFD*ALILSP Trigger: TGGGGACAGGATAAGGGCTCAGTCGAATTGCTTTGG...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR GCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGGTGAGCCAAGAGGCTTaGCAGAGAGGGAAATGCAAA | + |
Preference number: 2 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLVSQEA*QRGKCK Trigger: TTTGCATTTCCCTCTCTGGCAAGCCTCTTGGCTCAC...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTAAGCAAAGATGGCTTTaGAACACAAACATGCACGCG | + |
Preference number: 2 (lower is better) Translates to: STSKRVAARGANIQPVCSKQRWL*NTNMHA Trigger: CGCGTGCATGTTTGTGTTTCAAAGCCATCTTTGCTT...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | CTACCGCTGTCTGCGGAACAGGATTTGTGGCAGGGAAAGCCAGACTGGCTGAGAAGAAGGCCCACTCTGTaGCTTACAATACATCAGACT | + |
Preference number: 2 (lower is better) Translates to: LPLSAEQDLWQGKPDWLRRRPTL*LTIHQT Trigger: AGTCTGATGTATTGTAAGCCACAGAGTGGGCCTTCT...TCTCAGCCAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGATCTTCTACATTCCCTaGACTTCCAAAGCAGGAAAA | + |
Preference number: 2 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLIFYIP*TSKAGK Trigger: TTTTCCTGCTTTGGAAGTTCAGGGAATGTAGAAGAT...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR GCA 90 bp | TGTAACTGTACACACATGATAGCATCATTTTCATACAGCCCCAGACTGTCAGAAAGGACCGCTGTCCTGTaGCTCCTAGGCCTTCAGGAG | + |
Preference number: 2 (lower is better) Translates to: CNCTHMIASFSYSPRLSERTAVL*LLGLQE Trigger: CTCCTGAAGGCCTAGGAGGCACAGGACAGCGGTCCT...TTCTGACAGTCTGGGGCTGTATGAAAATGATGCTATCATGTGTGTACAGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CAA 90 bp | TTCCTGCCGTGCAATGGGGGTCAGAAACTGGGTTTTAGATCTATGTaGGGCAGTCTTCTGTCCTCTTTCAAATCTGGTCTGAGCTCAGTA | + |
Preference number: 2 (lower is better) Translates to: FLPCNGGQKLGFRSM*GSLLSSFKSGLSSV Trigger: TACTGAGCTCAGACCAGATTTGAAAGAGGACAGAAGACTGCCCAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | GACCATCCAAAGTGTCTTCATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTAAAGTTCTCCAACTATaGTCACAATTCCTTAGAAGC | + |
Preference number: 2 (lower is better) Translates to: DHPKCLHPGSLYGPTLSSKVLQL*SQFLRS Trigger: GCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTT...ACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGATGAAGACACTTTGGATGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR TCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGTTTGGAGACTTCTCATaGACAAAAGTGATAGATTGG | + |
Preference number: 2 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLFGDFS*TKVIDW Trigger: CCAATCTATCACTTTTGTTCATGAGAAGTCTCCAAA...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTTTACTTAGTAGTTTTTaGGTTTCCTTGGCTCAATCT | + |
Preference number: 2 (lower is better) Translates to: STSKRVAARGANIQPVCSLLSSF*VSLAQS Trigger: AGATTGAGCCAAGGAAACCCAAAAACTACTAAGTAA...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGTCCTGTTGGGTGGTTTaGTTTGTAAATCCTTTACAT | + |
Preference number: 2 (lower is better) Translates to: IPAASMAQHCPVLFRVPLSCWVV*FVNPLH Trigger: ATGTAAAGGATTTACAAACCAAACCACCCAACAGGA...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTATCCCGGCAGCCTCTATaGCCCAACACTGTCCAGTTC | + |
Preference number: 2 (lower is better) Translates to: AFTSLKQKDRSGPCILQLSRQPL*PNTVQF Trigger: GAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGA...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CAA 90 bp | GCTTGTAACCCTCTTTCACATCCCGAGAAACATGGAGATCAGCAGTaGAAGCTACCTTCGGGATTCCTTGATTGTGTACTATTCTCCCTG | + |
Preference number: 2 (lower is better) Translates to: ACNPLSHPEKHGDQQ*KLPSGFLDCVLFSL Trigger: CAGGGAGAATAGTACACAATCAAGGAATCCCGAAGGTAGCTTCAACTGCTGATCTCCATGTTTCTCGGGATGTGAAAGAGGGTTACAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | TTCCTGAATCTCTTTCCTGTCGTACCTCAGAACTGGCTGCAGGTGCTCACCAAAGGGAAGAAATTTGCTTaGGATGTCTTGTGTCAAGTC | + |
Preference number: 2 (lower is better) Translates to: FLNLFPVVPQNWLQVLTKGKKFA*DVLCQV Trigger: GACTTGACACAAGACATCCCAAGCAAATTTCTTCCC...TTTGGTGAGCACCTGCAGCCAGTTCTGAGGTACGACAGGAAAGAGATTCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTACGGGGTGAGGCCTCCTaGGTTGTCCTGTTCTACAAA | + |
Preference number: 2 (lower is better) Translates to: AFTSLKQKDRSGPCILQLRGEAS*VVLFYK Trigger: TTTGTAGAACAGGACAACCCAGGAGGCCTCACCCCG...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | TGTAACTGTACACACATGATAGCATCATTTTCATACAGCCCCAGACTGTCAGAATACATCAGACTTCAATaGGATGGGAGCCACAGGCCC | + |
Preference number: 2 (lower is better) Translates to: CNCTHMIASFSYSPRLSEYIRLQ*DGSHRP Trigger: GGGCCTGTGGCTCCCATCCCATTGAAGTCTGATGTA...TTCTGACAGTCTGGGGCTGTATGAAAATGATGCTATCATGTGTGTACAGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTCCGCCTCTTCCTCTGTaGAGTTCCTGCCGTGCAATG | + |
Preference number: 2 (lower is better) Translates to: SNTIMKSETLIPFKYLMLPPLPL*SSCRAM Trigger: CATTGCACGGCAGGAACTCCACAGAGGAAGAGGCGG...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR CCA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTACAGGGAAAGCCAGACTaGCTGAGAACTACTTGGGTG | + |
Preference number: 2 (lower is better) Translates to: AFTSLKQKDRSGPCILQLQGKPD*LRTTWV Trigger: CACCCAAGTAGTTCTCAGCCAGTCTGGCTTTCCCTG...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR GCA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTAGTCAGTCAATATTCCTaGCACAGGAGAGCTGTGAGG | + |
Preference number: 2 (lower is better) Translates to: AFTSLKQKDRSGPCILQLVSQYS*HRRAVR Trigger: CCTCACAGCTCTCCTGTGGCAGGAATATTGACTGAC...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR-3UTR GCA 90 bp | TCCTACACTTCCTGTTGGGTGGTTTGGTTTGTAAATCCTTTACATTCAAAGGCCCAGACACGTAACCTTTaGGAACACTTTCAACCTAGA | + |
Preference number: 2 (lower is better) Translates to: SYTSCWVVWFVNPLHSKAQTRNL*EHFQPR Trigger: TCTAGGTTGAAAGTGTTCGCAAAGGTTACGTGTCTG...GGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CCA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTAACATCCCGAGAAACATaGAGATCAGCAGTTGAAGCT | + |
Preference number: 2 (lower is better) Translates to: AFTSLKQKDRSGPCILQLTSRET*RSAVEA Trigger: AGCTTCAACTGCTGATCTCCATGTTTCTCGGGATGT...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR TCA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCTACCAGATACAAAGATaGGACACCCGAAAATATGAA | + |
Preference number: 2 (lower is better) Translates to: NWEEICLGCLVSSPAFLLYQIQR*DTRKYE Trigger: TTCATATTTTCGGGTGTCTCATCTTTGTATCTGGTA...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CCA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATATGGGGGTCAGAAACTaGGTTTTAGATCTATGTTGG | + |
Preference number: 2 (lower is better) Translates to: QKFSNYDHNSLEASPYTDMGVRN*VLDLCW Trigger: CCAACATAGATCTAAAACCCAGTTTCTGACCCCCAT...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CCA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTTACACCGAGACACTCTaGACCATCCAAAGTGTCTTC | + |
Preference number: 2 (lower is better) Translates to: SNTIMKSETLIPFKYLMLYTETL*TIQSVF Trigger: GAAGACACTTTGGATGGTCCAGAGTGTCTCGGTGTA...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CCA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTCCACACCCTCCCCACTaGATTAATACTAGCCCTTTT | + |
Preference number: 2 (lower is better) Translates to: SNTIMKSETLIPFKYLMLPHPPH*INTSPF Trigger: AAAAGGGCTAGTATTAATCCAGTGGGGAGGGTGTGG...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR TCA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATATCACCCCGAAATCCTaGAATTCAAGTCATGTGAAT | + |
Preference number: 2 (lower is better) Translates to: QKFSNYDHNSLEASPYTDITPKS*NSSHVN Trigger: ATTCACATGACTTGAATTTCAGGATTTCGGGGTGAT...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR TCA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTAAAAACGGCTTTCTCTTaGAGAGAAGAGAGACCTAAA | + |
Preference number: 2 (lower is better) Translates to: AFTSLKQKDRSGPCILQLKTAFS*REERPK Trigger: TTTAGGTCTCTCTTCTCTTCAAGAGAAAGCCGTTTT...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR GCA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTAAACTGGGAAGAAATTTaGTTGGGATGTCTTGTGTCA | + |
Preference number: 2 (lower is better) Translates to: AFTSLKQKDRSGPCILQLNWEEI*LGCLVS Trigger: TGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CCA 90 bp | TGTAACTGTACACACATGATAGCATCATTTTCATACAGCCCCAGACTGTCAGAATCCTACACTTCCTGTTaGGTGGTTTGGTTTGTAAAT | + |
Preference number: 2 (lower is better) Translates to: CNCTHMIASFSYSPRLSESYTSC*VVWFVN Trigger: ATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA...TTCTGACAGTCTGGGGCTGTATGAAAATGATGCTATCATGTGTGTACAGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CAA 90 bp | AATCGGCTTTCCCCAGCCACAATTAAAATCAGGTTTCTGAGAAGGTaGTCAAGATTCATTTGTTCAATTAGTGTCATTAAGAATGTAAAG | + |
Preference number: 2 (lower is better) Translates to: NRLSPATIKIRFLRR*SRFICSISVIKNVK Trigger: CTTTACATTCTTAATGACACTAATTGAACAAATGAATCTTGACAACCTTCTCAGAAACCTGATTTTAATTGTGGCTGGGGAAAGCCGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR TCA 72 bp | GCCAGCTCCTGCCAGTTCCTGCCAGCCCCTGCCACCTaGCCAGGGACCGCTACCCGTCAGTCGCTCACCGCA | + |
Preference number: 3 (lower is better) Translates to: ASSCQFLPAPAT*PGTATRQSLTA Trigger: TGCGGTGAGCGACTGACGGGTAGCGGTCCCTGGTCAGGTGGCAGGGGCTGGCAGGAACTGGCAGGAGCTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR GCA 72 bp | ATGCACCCCACCATATGCTTCCAGTGCCCTCAAGGTTaGAGGACCGCTGTCCTGTGCCTCCTAGGCCTTCAG | + |
Preference number: 3 (lower is better) Translates to: MHPTICFQCPQG*RTAVLCLLGLQ Trigger: CTGAAGGCCTAGGAGGCACAGGACAGCGGTCCTGCAACCTTGAGGGCACTGGAAGCATATGGTGGGGTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | CGCTTAGCTCACAGGAGGTTTGGAACGCTCTTCCACTaGCTCTTCACCCGCTCTCGTTGCCCGTCATGCCTG | + |
Preference number: 3 (lower is better) Translates to: RLAHRRFGTLFH*LFTRSRCPSCL Trigger: CAGGCATGACGGGCAACGAGAGCGGGTGAAGAGCCAGTGGAAGAGCGTTCCAAACCTCCTGTGAGCTAAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR GCA 72 bp | CTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGTCTaGGGAACAGGATTTGTGGCAGGGAAAGCCAGACTG | + |
Preference number: 3 (lower is better) Translates to: LHPVREAAPTAV*GTGFVAGKARL Trigger: CAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR TCA 72 bp | CACACAGGCAAACTGAGCATCCCAAAGCAATTCGACTaGGCCCTTATCCTGTCCCCACCGCCTCTTCCTCTG | + |
Preference number: 3 (lower is better) Translates to: HTGKLSIPKQFD*ALILSPPPLPL Trigger: CAGAGGAAGAGGCGGTGGGGACAGGATAAGGGCTCAGTCGAATTGCTTTGGGATGCTCAGTTTGCCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR GCA 72 bp | TCTACAAAATGCATGCACCCCACCATATGCTTCCAGTaGCCTCAAGGTTGCAGGACCGCTGTCCTGTGCCTC | + |
Preference number: 3 (lower is better) Translates to: STKCMHPTICFQ*PQGCRTAVLCL Trigger: GAGGCACAGGACAGCGGTCCTGCAACCTTGAGGGCACTGGAAGCATATGGTGGGGTGCATGCATTTTGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR TCA 72 bp | GGTTTAGGGGGAAATCCCCTTAGCCACCCAGTGCCGTaGCAAGCTCCGAGAAATGCCACCACAATCCCAAAA | + |
Preference number: 3 (lower is better) Translates to: GLGGNPLSHPVP*QAPRNATTIPK Trigger: TTTTGGGATTGTGGTGGCATTTCTCGGAGCTTGTCACGGCACTGGGTGGCTAAGGGGATTTCCCCCTAAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR GCA 72 bp | GGGGGAGGAACGGGGCTTTGTGTTAACCTTGAGGTCTaGCTCCACTCAGACTTAGGGAAGGTTCCTGAGAAA | + |
Preference number: 3 (lower is better) Translates to: GGGTGLCVNLEV*LHSDLGKVPEK Trigger: TTTCTCAGGAACCTTCCCTAAGTCTGAGTGGAGGCAGACCTCAAGGTTAACACAAAGCCCCGTTCCTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGCATGGAGATCAGCAGTaGAAGCTACCTTCGGGATTC | + |
Preference number: 3 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLHGDQQ*KLPSGF Trigger: GAATCCCGAAGGTAGCTTCAACTGCTGATCTCCATG...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR GCA 72 bp | TTGGCTCAATCTACAAAATGCATGCACCCCACCATATaGTTCCAGTGCCCTCAAGGTTGCAGGACCGCTGTC | + |
Preference number: 3 (lower is better) Translates to: LAQSTKCMHPTI*FQCPQGCRTAV Trigger: GACAGCGGTCCTGCAACCTTGAGGGCACTGGAAGCATATGGTGGGGTGCATGCATTTTGTAGATTGAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGCAAGCAAAGATGGCTTaGAAACACAAACATGCACGC | + |
Preference number: 3 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLQAKMA*KHKHAR Trigger: GCGTGCATGTTTGTGTTTCAAAGCCATCTTTGCTTG...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR TCA 72 bp | AGCACCCGCCGCCACACTCAGATCACCCCGAAATCCTaGAATTCAAGTCATGTGAATGTGAAGGAACGTCGT | + |
Preference number: 3 (lower is better) Translates to: STRRHTQITPKS*NSSHVNVKERR Trigger: ACGACGTTCCTTCACATTCACATGACTTGAATTTCAGGATTTCGGGGTGATCTGAGTGTGGCGGCGGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | GGCCCACTCTGTGGCTTACAATACATCAGACTTCAATaGGATGGGAGCCACAGGCCCCCAAGTTTCTATTCT | + |
Preference number: 3 (lower is better) Translates to: GPLCGLQYIRLQ*DGSHRPPSFYS Trigger: AGAATAGAAACTTGGGGGCCTGTGGCTCCCATCCCATTGAAGTCTGATGTATTGTAAGCCACAGAGTGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | CTGTGGAGTTCCTGCCGTGCAATGGGGGTCAGAAACTaGGTTTTAGATCTATGTTGGGCAGTCTTCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: LWSSCRAMGVRN*VLDLCWAVFCP Trigger: AGGACAGAAGACTGCCCAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAACTCCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | TCCTTCCTGAATCTCTTTCCTGTCGTACCTCAGAACTaGCTGCAGGTGCTCACCAAACATGGCTGGTGTCAT | + |
Preference number: 3 (lower is better) Translates to: SFLNLFPVVPQN*LQVLTKHGWCH Trigger: ATGACACCAGCCATGTTTGGTGAGCACCTGCAGCCAGTTCTGAGGTACGACAGGAAAGAGATTCAGGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | GATGCGCTCTCTCATCCAGGTAGACCAGAAGGTTACTaGGGAGGGACAAACAGGGAGAAAGTTAACAGTCCT | + |
Preference number: 3 (lower is better) Translates to: DALSHPGRPEGY*GGTNREKVNSP Trigger: AGGACTGTTAACTTTCTCCCTGTTTGTCCCTCCCCAGTAACCTTCTGGTCTACCTGGATGAGAGAGCGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGAAACTGGGAAGAAATTaGCTTGGGATGTCTTGTGTC | + |
Preference number: 3 (lower is better) Translates to: IPAASMAQHCPVLFRVPLKLGRN*LGMSCV Trigger: GACACAAGACATCCCAAGCAAATTTCTTCCCAGTTT...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGGACTTCAATTTAGCATaGAAAATCGGCTTTCCCCAG | + |
Preference number: 3 (lower is better) Translates to: IPAASMAQHCPVLFRVPLDFNLA*KIGFPQ Trigger: CTGGGGAAAGCCGATTTTCAATGCTAAATTGAAGTC...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR TCA 72 bp | TTCCTGAGAAACAGACCTGAGCCAAGGGTTAGGGAGTaGGGTGCTCCCACCAGTCAGACAATCTTCTACATT | + |
Preference number: 3 (lower is better) Translates to: FLRNRPEPRVRE*GAPTSQTIFYI Trigger: AATGTAGAAGATTGTCTGACTGGTGGGAGCACCTCACTCCCTAACCCTTGGCTCAGGTCTGTTTCTCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR GCA 72 bp | TATGGATCAGTCCATATCAAGGTACACTCTCCAAAGTaGTTAGCACCAATTCCCCCACCGGCTAGGAGTCCA | + |
Preference number: 3 (lower is better) Translates to: YGSVHIKVHSPK*LAPIPPPARSP Trigger: TGGACTCCTAGCCGGTGGGGGAATTGGTGCTAAGCACTTTGGAGAGTGTACCTTGATATGGACTGATCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | TCAGTAGTGAGAATACAGAGAACCAGAGAACCGGGATaGGCCCTCATTCTCAGAGGTGAATGTCAAGAAGGC | + |
Preference number: 3 (lower is better) Translates to: SVVRIQRTREPG*ALILRGECQEG Trigger: GCCTTCTTGACATTCACCTCTGAGAATGAGGGCCCATCCCGGTTCTCTGGTTCTCTGTATTCTCACTACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | CCTCAGAACTGGCTGCAGGTGCTCACCAAACATGGCTaGTGTCATGATATGGATCAGTCCATATCAAGGTAC | + |
Preference number: 3 (lower is better) Translates to: PQNWLQVLTKHG*CHDMDQSISRY Trigger: GTACCTTGATATGGACTGATCCATATCATGACACCAGCCATGTTTGGTGAGCACCTGCAGCCAGTTCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | ATGATTAAGCTTTGGCTTAACTACACCGAGACACTCTaGACCATCCAAAGTGTCTTCATCCCGGCAGCCTCT | + |
Preference number: 3 (lower is better) Translates to: MIKLWLNYTETL*TIQSVFIPAAS Trigger: AGAGGCTGCCGGGATGAAGACACTTTGGATGGTCCAGAGTGTCTCGGTGTAGTTAAGCCAAAGCTTAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | TTCCTGAATCTCTTTCCTGTCGTACCTCAGAACTGGCTGCAGGTGCTCACCAAATTTGCTTGGGATGTCTaGTGTCAAGTCCAGCTTTTC | + |
Preference number: 3 (lower is better) Translates to: FLNLFPVVPQNWLQVLTKFAWDV*CQVQLF Trigger: GAAAAGCTGGACTTGACACAAGACATCCCAAGCAAA...TTTGGTGAGCACCTGCAGCCAGTTCTGAGGTACGACAGGAAAGAGATTCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR TCA 72 bp | AGACTGGCTGAGAACTACTTGGGTGAACGACGACACTaGCCAGACAGCTCTTATTCAAGGTCAAACGTTTGT | + |
Preference number: 3 (lower is better) Translates to: RLAENYLGERRH*PDSSYSRSNVC Trigger: ACAAACGTTTGACCTTGAATAAGAGCTGTCTGGTCAGTGTCGTCGTTCACCCAAGTAGTTCTCAGCCAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | ACTCTGTGGCTTACAATACATCAGACTTCAATGGGATaGGAGCCACAGGCCCCCAAGTTTCTATTCTTTGGT | + |
Preference number: 3 (lower is better) Translates to: TLWLTIHQTSMG*EPQAPKFLFFG Trigger: ACCAAAGAATAGAAACTTGGGGGCCTGTGGCTCCCATCCCATTGAAGTCTGATGTATTGTAAGCCACAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | TGCAGGTGCTCACCAAACATGGCTGGTGTCATGATATaGATCAGTCCATATCAAGGTACACTCTCCAAAGTG | + |
Preference number: 3 (lower is better) Translates to: CRCSPNMAGVMI*ISPYQGTLSKV Trigger: CACTTTGGAGAGTGTACCTTGATATGGACTGATCCATATCATGACACCAGCCATGTTTGGTGAGCACCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | GTCTATCCATGTACTGATCAAGACCCAACCACAAGATaGGAACCTGGGCCGAGTTATCAGATCCTAAGTAAA | + |
Preference number: 3 (lower is better) Translates to: VYPCTDQDPTTR*EPGPSYQILSK Trigger: TTTACTTAGGATCTGATAACTCGGCCCAGGTTCCCATCTTGTGGTTGGGTCTTGATCAGTACATGGATAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATATCAAAGCTATCCCTTaGCCTACCACACCCTCACAC | + |
Preference number: 3 (lower is better) Translates to: QKFSNYDHNSLEASPYTDIKAIP*PTTPSH Trigger: GTGTGAGGGTGTGGTAGGCAAAGGGATAGCTTTGAT...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR TCA 72 bp | CTCTTTCACATCCCGAGAAACATGGAGATCAGCAGTTaGAGCTACCTTCGGGATTCCTTGATTGTGTACTAT | + |
Preference number: 3 (lower is better) Translates to: LFHIPRNMEISS*SYLRDSLIVYY Trigger: ATAGTACACAATCAAGGAATCCCGAAGGTAGCTTCAACTGCTGATCTCCATGTTTCTCGGGATGTGAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR CCA 72 bp | AAGGAGTTACCTGCCAGCCATAACGGAGTACAGGTTTaGAGACTTCTCATGAACAAAAGTGATAGATTGGTG | + |
Preference number: 3 (lower is better) Translates to: KELPASHNGVQV*RLLMNKSDRLV Trigger: CACCAATCTATCACTTTTGTTCATGAGAAGTCTCCAAACCTGTACTCCGTTATGGCTGGCAGGTAACTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR TCA 72 bp | TCCCACACACCCACCCTTCTTTACCAGATACAAAGATaGGACACCCGAAAATATGAATGGTCTGCTTTTCTA | + |
Preference number: 3 (lower is better) Translates to: SHTPTLLYQIQR*DTRKYEWSAFL Trigger: TAGAAAAGCAGACCATTCATATTTTCGGGTGTCTCATCTTTGTATCTGGTAAAGAAGGGTGGGTGTGTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR TCA 72 bp | CACGTAACCTTTGCGAACACTTTCAACCTAGAGTCCTaGGCTAAATCGAGTTTCTTAGCAAACTGGGAAGAA | + |
Preference number: 3 (lower is better) Translates to: HVTFANTFNLES*AKSSFLANWEE Trigger: TTCTTCCCAGTTTGCTAAGAAACTCGATTTAGCTCAGGACTCTAGGTTGAAAGTGTTCGCAAAGGTTACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR GCA 72 bp | GCTAAATCGAGTTTCTTAGCAAACTGGGAAGAAATTTaGTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTC | + |
Preference number: 3 (lower is better) Translates to: AKSSFLANWEEI*LGCLVSSPAFL Trigger: GAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTTTGCTAAGAAACTCGATTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTAAGTTTTTGGGTTTCCTaGGCTCAATCTACAAAATGC | + |
Preference number: 3 (lower is better) Translates to: AFTSLKQKDRSGPCILQLSFWVS*AQSTKC Trigger: GCATTTTGTAGATTGAGCCAAGGAAACCCAAAAACT...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTTGGGAAGAAATTTGCTaGGGATGTCTTGTGTCAAGT | + |
Preference number: 3 (lower is better) Translates to: SNTIMKSETLIPFKYLMLWEEIC*GCLVSS Trigger: ACTTGACACAAGACATCCCAAGCAAATTTCTTCCCA...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTTTCCTGTTGGGTGGTTaGGTTTGTAAATCCTTTACA | + |
Preference number: 3 (lower is better) Translates to: SNTIMKSETLIPFKYLMLFLLGG*VCKSFT Trigger: TGTAAAGGATTTACAAACCAAACCACCCAACAGGAA...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
3UTR-3UTR CAA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTAGGTTTCTGAGAAGGTaGTCAAGATTCATTTGTTCA | + |
Preference number: 3 (lower is better) Translates to: SNTIMKSETLIPFKYLMLRFLRR*SRFICS Trigger: TGAACAAATGAATCTTGACAACCTTCTCAGAAACCT...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
CDS-3UTR GCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGCCTCGTCGCAGGAGCTaGAGCCGTGCGGCCGGCGCA | + |
Preference number: 4 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLPRRRS*SRAAGA Trigger: TGCGCCGGCCGCACGGCTGCAGCTCCTGCGACGAGG...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGCAGGAGCTGCAGCCGTaGGGCCGGCGCATCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLQELQP*GRRISS Trigger: GCTGCTGATGCGCCGGCCGCACGGCTGCAGCTCCTG...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
CDS-3UTR TCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTGGCCTCGGATGGTCTTaGGCTCCTGCACCTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: STSKRVAARGANIQPVCSGLGWS*APAPGP Trigger: TGGCCCAGGTGCAGGAGCTCAAGACCATCCGAGGCC...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
CDS-3UTR GCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGGGGTGGTGCGCATGGTaGCGGTGGTTGCTGTGGCCG | + |
Preference number: 4 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLGWCAW*RWLLWP Trigger: CGGCCACAGCAACCACCGGCACCATGCGCACCACCC...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
CDS-3UTR CCA 90 bp | GACCATCCAAAGTGTCTTCATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTCAGGAAGGCGGAGGATaGCAGCGCGTCCATGCCCGC | + |
Preference number: 4 (lower is better) Translates to: DHPKCLHPGSLYGPTLSSQEGGG*QRVHAR Trigger: GCGGGCATGGACGCGCTGCCATCCTCCGCCTTCCTG...ACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGATGAAGACACTTTGGATGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | CTACCGCTGTCTGCGGAACAGGATTTGTGGCAGGGAAAGCCAGACTGGCTGAGAACCTCATCGTCGTGGTaGTGGCAGAAGCCGAGGCGC | + |
Preference number: 4 (lower is better) Translates to: LPLSAEQDLWQGKPDWLRTSSSW*WQKPRR Trigger: GCGCCTCGGCTTCTGCCAGCACCACGACGATGAGGT...TCTCAGCCAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
CDS-3UTR GCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTCAGCTGGATGGTGAGTaGCCGAGAGTCCTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: STSKRVAARGANIQPVCSQLDGE*PRVLQG Trigger: GCCCTGCAGGACTCTCGGGCACTCACCATCCAGCTG...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
CDS-3UTR CCA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGAAGCTGTGGCCACCGTaGCGGCCCAGCGTGCACTCT | + |
Preference number: 4 (lower is better) Translates to: IPAASMAQHCPVLFRVPLKLWPP*RPSVHS Trigger: AGAGTGCACGCTGGGCCGCCACGGTGGCCACAGCTT...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTAGGTCACCTCCCGAATaGCGGGGCTCACCATCGTGG | + |
Preference number: 4 (lower is better) Translates to: STSKRVAARGANIQPVCSRSPPE*RGSPSW Trigger: CCACGATGGTGAGCCCCGCCATTCGGGAGGTGACCT...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGTGTAATGGTCCTTGGTaGGGCGGACGCGCTGGTGCG | + |
Preference number: 4 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLCNGPW*GGRAGA Trigger: CGCACCAGCGCGTCCGCCTCACCAAGGACCATTACA...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | CTACCGCTGTCTGCGGAACAGGATTTGTGGCAGGGAAAGCCAGACTGGCTGAGACCAGCGTGCACTCTCTaGAGATGGGGACAGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: LPLSAEQDLWQGKPDWLRPACTL*RWGQSR Trigger: CCTGCTCTGTCCCCATCTGCAGAGAGTGCACGCTGG...TCTCAGCCAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTTCTTCCAGGACCTGCTaGACGGCGCTGATGGTGCTC | + |
Preference number: 4 (lower is better) Translates to: STSKRVAARGANIQPVCSSSRTC*TALMVL Trigger: GAGCACCATCAGCGCCGTGCAGCAGGTCCTGGAAGA...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | GACCATCCAAAGTGTCTTCATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTAGGGCCTGCAGAGCTTaGCCTCCCCGTCACCTTCAC | + |
Preference number: 4 (lower is better) Translates to: DHPKCLHPGSLYGPTLSSRACRA*PPRHLH Trigger: GTGAAGGTGACGGGGAGGGCAAGCTCTGCAGGCCCT...ACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGATGAAGACACTTTGGATGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
||
CDS-3UTR CCA 90 bp | AGCACAAGTAAACGCGTTGCTGCCAGGGGCGCCAACATTCAGCCAGTGTGCTCTGAAAGCCACGCCCCGTaGAGAGTCGAAGTGCTTCCA | + |
Preference number: 4 (lower is better) Translates to: STSKRVAARGANIQPVCSESHAP*RVEVLP Trigger: TGGAAGCACTTCGACTCTCCACGGGGCGTGGCTTTC...AGAGCACACTGGCTGAATGTTGGCGCCCCTGGCAGCAACGCGTTTACTTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGCACAGCAGGCAGATCTaGAAGTCGGTCTCCGGGAAC | + |
Preference number: 4 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLHSRQI*KSVSGN Trigger: GTTCCCGGAGACCGACTTCCAGATCTGCCTGCTGTG...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | GACCATCCAAAGTGTCTTCATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTCACAGCCACACCCTGTaGTCGCAGGAACTGCCCATT | + |
Preference number: 4 (lower is better) Translates to: DHPKCLHPGSLYGPTLSSHSHTL*SQELPI Trigger: AATGGGCAGTTCCTGCGACCACAGGGTGTGGCTGTG...ACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGATGAAGACACTTTGGATGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | TTCCTGAATCTCTTTCCTGTCGTACCTCAGAACTGGCTGCAGGTGCTCACCAAATGTGGTCGCAGGAACTaGCCATTGCCCGAGCCCTCC | + |
Preference number: 4 (lower is better) Translates to: FLNLFPVVPQNWLQVLTKCGRRN*PLPEPS Trigger: GGAGGGCTCGGGCAATGGGCAGTTCCTGCGACCACA...TTTGGTGAGCACCTGCAGCCAGTTCTGAGGTACGACAGGAAAGAGATTCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CAA 72 bp | GAGAAGCAGCTCCTACCGCTGTCTGCGGAACAGGATTaGTGGCAGGGAAAGCCAGACTGGCTGAGAACTACT | + |
Preference number: 4 (lower is better) Translates to: EKQLLPLSAEQD*WQGKPDWLRTT Trigger: AGTAGTTCTCAGCCAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAGGAGCTGCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | GACCATCCAAAGTGTCTTCATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTGATTGGCAATCAGGGTaGATAACCAGAAGCCGGTGG | + |
Preference number: 4 (lower is better) Translates to: DHPKCLHPGSLYGPTLSSDWQSG*ITRSRW Trigger: CCACCGGCTTCTGGTTATTCACCCTGATTGCCAATC...ACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGATGAAGACACTTTGGATGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCAGAGCCTGGCGGCCCTaGTGGGCATCAGCCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: NWEEICLGCLVSSPAFLLRAWRP*WASASS Trigger: GCTGCTGGCTGATGCCCAGCAGGGCCGCCAGGCTCT...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | TTCCTGAATCTCTTTCCTGTCGTACCTCAGAACTGGCTGCAGGTGCTCACCAAAGCCACAGTCTGGGCCTaGTCGATGCTCAGCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: FLNLFPVVPQNWLQVLTKATVWA*SMLSWR Trigger: TCTCCAGCTGAGCATCGAGCAGGCCCAGACTGTGGC...TTTGGTGAGCACCTGCAGCCAGTTCTGAGGTACGACAGGAAAGAGATTCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | CTACCGCTGTCTGCGGAACAGGATTTGTGGCAGGGAAAGCCAGACTGGCTGAGACTTGAGCACCAAACTTaGACAGGAAGCTGCCATTGG | + |
Preference number: 4 (lower is better) Translates to: LPLSAEQDLWQGKPDWLRLEHQT*TGSCHW Trigger: CCAATGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAG...TCTCAGCCAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | TCCTACACTTCCTGTTGGGTGGTTTGGTTTGTAAATCCTTTACATTCAAAGGCCTGCGCATGGTGCCGGTaGTTGCTGTGGCCGCCCGCG | + |
Preference number: 4 (lower is better) Translates to: SYTSCWVVWFVNPLHSKACAWCR*LLWPPA Trigger: CGCGGGCGGCCACAGCAACCACCGGCACCATGCGCA...GGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCGCCGGGTGGTGCGCATaGTGCCGGTGGTTGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: NWEEICLGCLVSSPAFLLAGWCA*CRWLLW Trigger: CCACAGCAACCACCGGCACCATGCGCACCACCCGGC...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | GTGGAGTTCCTGCCGTGCAATGGGGGTCAGAAACTGGGTTTTAGATCTATGTTGAGGACCTCATCGTCGTaGTGCTGGCAGAAGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: VEFLPCNGGQKLGFRSMLRTSSS*CWQKPR Trigger: CCTCGGCTTCTGCCAGCACCACGACGATGAGGTCCT...CAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAACTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | GTGGAGTTCCTGCCGTGCAATGGGGGTCAGAAACTGGGTTTTAGATCTATGTTGGCATCAGCCAGCAGCTaGATGGTGAGTGCCCGAGAG | + |
Preference number: 4 (lower is better) Translates to: VEFLPCNGGQKLGFRSMLASASS*MVSARE Trigger: CTCTCGGGCACTCACCATCCAGCTGCTGGCTGATGC...CAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAACTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | GACCATCCAAAGTGTCTTCATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTATGATTCTCCCTTCCTaGTCCACAGCCACACCCTGT | + |
Preference number: 4 (lower is better) Translates to: DHPKCLHPGSLYGPTLSSMILPS*STATPC Trigger: ACAGGGTGTGGCTGTGGACCAGGAAGGGAGAATCAT...ACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGATGAAGACACTTTGGATGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCCCTGCTGCACGGCGCTaGTGGTGCTCTCCAGCTTGC | + |
Preference number: 4 (lower is better) Translates to: NWEEICLGCLVSSPAFLLPAARR*WCSPAC Trigger: GCAAGCTGGAGAGCACCATCAGCGCCGTGCAGCAGG...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | GTGGAGTTCCTGCCGTGCAATGGGGGTCAGAAACTGGGTTTTAGATCTATGTTGCGCAGCTTCTCCACCTaGAGGAACAGAGACTTCGCC | + |
Preference number: 4 (lower is better) Translates to: VEFLPCNGGQKLGFRSMLRSFST*RNRDFA Trigger: GGCGAAGTCTCTGTTCCTGCAGGTGGAGAAGCTGCG...CAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAACTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | TTCCTGAATCTCTTTCCTGTCGTACCTCAGAACTGGCTGCAGGTGCTCACCAAAAGCCGCACATCTCCTTaGACAGCAGGCAGATCTGGA | + |
Preference number: 4 (lower is better) Translates to: FLNLFPVVPQNWLQVLTKSRTSP*TAGRSG Trigger: TCCAGATCTGCCTGCTGTGCAAGGAGATGTGCGGCT...TTTGGTGAGCACCTGCAGCCAGTTCTGAGGTACGACAGGAAAGAGATTCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTCATGGTGCCGGTGGTTaGTGTGGCCGCCCGCGCCCC | + |
Preference number: 4 (lower is better) Translates to: SNTIMKSETLIPFKYLMLHGAGG*CGRPRP Trigger: GGGGCGCGGGCGGCCACAGCAACCACCGGCACCATG...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGACTTGCACAGGAAGCTaGCATTGGCCTCAAACATCT | + |
Preference number: 4 (lower is better) Translates to: IPAASMAQHCPVLFRVPLTCTGS*HWPQTS Trigger: AGATGTTTGAGGCCAATGGCAGCTTCCTGTGCAAGT...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCTCATCGTCGTGGTGCTaGCAGAAGCCGAGGCGCTCC | + |
Preference number: 4 (lower is better) Translates to: NWEEICLGCLVSSPAFLLSSSWC*QKPRRS Trigger: GGAGCGCCTCGGCTTCTGCCAGCACCACGACGATGA...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGATAACCAGAAGCCGGTaGTTGTTGAAGTCGGTGACT | + |
Preference number: 4 (lower is better) Translates to: IPAASMAQHCPVLFRVPLITRSR*LLKSVT Trigger: AGTCACCGACTTCAACAACCACCGGCTTCTGGTTAT...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTATGGCAGCGCGTCCATaGCCGCCGCCTCGGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: SNTIMKSETLIPFKYLMLMAARP*PPPRPG Trigger: TCCTGGCCGAGGCGGCGGGCATGGACGCGCTGCCAT...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATCGTGGCGGCCCAGCGTaGACTCTCTGCAGATGGGGA | + |
Preference number: 4 (lower is better) Translates to: QKFSNYDHNSLEASPYTDRGGPA*TLCRWG Trigger: TCCCCATCTGCAGAGAGTGCACGCTGGGCCGCCACG...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | GTGGAGTTCCTGCCGTGCAATGGGGGTCAGAAACTGGGTTTTAGATCTATGTTGACAGGAAGCTGCCATTaGCCTCAAACATCTGCACGC | + |
Preference number: 4 (lower is better) Translates to: VEFLPCNGGQKLGFRSMLTGSCH*PQTSAR Trigger: GCGTGCAGATGTTTGAGGCCAATGGCAGCTTCCTGT...CAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAACTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | TGTAACTGTACACACATGATAGCATCATTTTCATACAGCCCCAGACTGTCAGAACGTCCAGCAGGTTGCTaGGCAGGAAGGCGGAGGATG | + |
Preference number: 4 (lower is better) Translates to: CNCTHMIASFSYSPRLSERPAGC*AGRRRM Trigger: CATCCTCCGCCTTCCTGCTCAGCAACCTGCTGGACG...TTCTGACAGTCTGGGGCTGTATGAAAATGATGCTATCATGTGTGTACAGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATCCAGCAGCTGGATGGTaGGTGCCCGAGAGTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: QKFSNYDHNSLEASPYTDPAAGW*VPESPA Trigger: TGCAGGACTCTCGGGCACTCACCATCCAGCTGCTGG...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | TTAGCAAACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTGAGGCCACCTTCCCCTaGAGGGCACGCTTGATGCCA | + |
Preference number: 4 (lower is better) Translates to: LANWEEICLGCLVSSPAFEATFP*RARLMP Trigger: TGGCATCAAGCGTGCCCTTCAGGGGAAGGTGGCCTC...AAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTTTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATGCAGGAACTGCCCATTaGCCGAGCCCTCCGAACCCA | + |
Preference number: 4 (lower is better) Translates to: QKFSNYDHNSLEASPYTDAGTAH*PSPPNP Trigger: TGGGTTCGGAGGGCTCGGGCAATGGGCAGTTCCTGC...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCTGTTCTGCCACAGTCTaGGCCTGCTCGATGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: NWEEICLGCLVSSPAFLLCSATV*ACSMLS Trigger: GCTGAGCATCGAGCAGGCCCAGACTGTGGCAGAACA...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATATGCGGTCATCTTCTTaGGGCTGCAGGAGGCCTCGG | + |
Preference number: 4 (lower is better) Translates to: QKFSNYDHNSLEASPYTDMRSSS*GCRRPR Trigger: CCGAGGCCTCCTGCAGCCCCAAGAAGATGACCGCAT...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | TTAGCAAACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCCGAAGCCACTCCCTTaGGCACCAAACTTGCACAGG | + |
Preference number: 4 (lower is better) Translates to: LANWEEICLGCLVSSPAFPKPLP*APNLHR Trigger: CCTGTGCAAGTTTGGTGCTCAAGGGAGTGGCTTCGG...AAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTTTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTTCGCACAGGTGTTCCTaGCAGTCGAGGCAGCGCGAC | + |
Preference number: 4 (lower is better) Translates to: SNTIMKSETLIPFKYLMLSHRCS*QSRQRD Trigger: GTCGCGCTGCCTCGACTGCCAGGAACACCTGTGCGA...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | TCCTACACTTCCTGTTGGGTGGTTTGGTTTGTAAATCCTTTACATTCAAAGGCCTGCACTCTCTGCAGATaGGGACAGAGCAGGTGTCAC | + |
Preference number: 4 (lower is better) Translates to: SYTSCWVVWFVNPLHSKACTLCR*GQSRCH Trigger: GTGACACCTGCTCTGTCCCCATCTGCAGAGAGTGCA...GGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTTTGAGCTCCTGCACCTaGGCCAGCATCCGGTCTCGG | + |
Preference number: 4 (lower is better) Translates to: SNTIMKSETLIPFKYLMLLSSCT*ASIRSR Trigger: CCGAGACCGGATGCTGGCCCAGGTGCAGGAGCTCAA...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | TCCTACACTTCCTGTTGGGTGGTTTGGTTTGTAAATCCTTTACATTCAAAGGCCTGGAATCGGCTACGATaGTTCTCCCTTCCTGGTCCA | + |
Preference number: 4 (lower is better) Translates to: SYTSCWVVWFVNPLHSKAWNRLR*FSLPGP Trigger: TGGACCAGGAAGGGAGAATCATCGTAGCCGATTCCA...GGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | TTAGCAAACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTGCCTTGACCTCAGACTaGACCACCTTCGCCTTCATC | + |
Preference number: 4 (lower is better) Translates to: LANWEEICLGCLVSSPAFALTSD*TTFAFI Trigger: GATGAAGGCGAAGGTGGTCCAGTCTGAGGTCAAGGC...AAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTTTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | TCAAATACAATCATGAAGTCAGAGACTCTCATTCCCTTCAAATACCTCATGCTTAGCTTGCTGAGACTCTaGCGCAGCTTCTCCACCTGC | + |
Preference number: 4 (lower is better) Translates to: SNTIMKSETLIPFKYLMLSLLRL*RSFSTC Trigger: GCAGGTGGAGAAGCTGCGGCAGAGTCTCAGCAAGCT...AAGCATGAGGTATTTGAAGGGAATGAGAGTCTCTGACTTCATGATTGTATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR TCA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATACTGGCCCTCGAAGGTaGAGATCTGAATGCGATGAT | + |
Preference number: 4 (lower is better) Translates to: QKFSNYDHNSLEASPYTDTGPRR*RSECDD Trigger: ATCATCGCATTCAGATCTTCACCTTCGAGGGCCAGT...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | TCCTACACTTCCTGTTGGGTGGTTTGGTTTGTAAATCCTTTACATTCAAAGGCCGTACCAAACTTGTGGTaGAAGGAACCACAGGGCTTA | + |
Preference number: 4 (lower is better) Translates to: SYTSCWVVWFVNPLHSKAVPNLW*KEPQGL Trigger: TAAGCCCTGTGGTTCCTTCCACCACAAGTTTGGTAC...GGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR GCA 90 bp | TCCTACACTTCCTGTTGGGTGGTTTGGTTTGTAAATCCTTTACATTCAAAGGCCCTGAAACGAGGATCTTaGCCTCAGAATTCACTGCTA | + |
Preference number: 4 (lower is better) Translates to: SYTSCWVVWFVNPLHSKALKRGS*PQNSLL Trigger: TAGCAGTGAATTCTGAGGGCAAGATCCTCGTTTCAG...GGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CCA 90 bp | GCATTCACTTCTCTTAAACAAAAAGACCGAAGTGGGCCGTGTATTCTACAGTTACAGGGCTTAAACACCTaGATTCTGTTATTGCTTCGG | + |
Preference number: 4 (lower is better) Translates to: AFTSLKQKDRSGPCILQLQGLNT*ILLLLR Trigger: CCGAAGCAATAACAGAATCCAGGTGTTTAAGCCCTG...TAACTGTAGAATACACGGCCCACTTCGGTCTTTTTGTTTAAGAGAAGTGAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CAA 72 bp | AAATCGAGTTTCTTAGCAAACTGGGAAGAAATTTGCTaGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: KSSFLANWEEIC*GCLVSSPAFLL Trigger: GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTTTGCTAAGAAACTCGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CAA 72 bp | GACATATACTGTGTCCTACACTTCCTGTTGGGTGGTTaGGTTTGTAAATCCTTTACATTCAAAGGCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: DIYCVLHFLLGG*VCKSFTFKGLW Trigger: CCAAAGGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGACACAGTATATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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3UTR CAA 72 bp | TCCCCAGCCACAATTAAAATCAGGTTTCTGAGAAGGTaGTCAAGATTCATTTGTTCAATTAGTGTCATTAAG | + |
Preference number: 4 (lower is better) Translates to: SPATIKIRFLRR*SRFICSISVIK Trigger: CTTAATGACACTAATTGAACAAATGAATCTTGACAACCTTCTCAGAAACCTGATTTTAATTGTGGCTGGGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | GGAGAAGGGCGCGCCCGCGAAGGGCGGCCCGAGCCCCAGCTGCTGTaGCGCGGAGGCGGCCGCAGGCCCCGGAGGGCCGCGCTCGATGTA | + |
Preference number: 5 (lower is better) Translates to: GEGRAREGRPEPQLL*RGGGRRPRRAALDV Trigger: TACATCGAGCGCGGCCCTCCGGGGCCTGCGGCCGCCTCCGCGGCACAGCAGCTGGGGCTCGGGCCGCCCTTCGCGGGCGCGCCCTTCTCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | AGAATGGAGAAGGGCGCGCCCGCGAAGGGCGGCCCGAGCCCCAGCTaGTGTGCCGCGGAGGCGGCCGCAGGCCCCGGAGGGCCGCGCTCG | + |
Preference number: 5 (lower is better) Translates to: RMEKGAPAKGGPSPS*CAAEAAAGPGGPRS Trigger: CGAGCGCGGCCCTCCGGGGCCTGCGGCCGCCTCCGCGGCACAGCAGCTGGGGCTCGGGCCGCCCTTCGCGGGCGCGCCCTTCTCCATTCT 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | AGTCGAGGCAGCGCGACGAGGCGGCGTTGCCCTCGTCGCAGGAGCTaGAGCCGTGCGGCCGGCGCATCAGCAGCGACCCGGGGGAGGCGG | + |
Preference number: 5 (lower is better) Translates to: SRGSATRRRCPRRRS*SRAAGASAATRGRR Trigger: CCGCCTCCCCCGGGTCGCTGCTGATGCGCCGGCCGCACGGCTGCAGCTCCTGCGACGAGGGCAACGCCGCCTCGTCGCGCTGCCTCGACT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | GCGGCGGCTCTTCGGCGGTGGCCACCACGGCGTCCAGCAGGTTGCTaGGCAGGAAGGCGGAGGATGGCAGCGCGTCCATGCCCGCCGCCT | + |
Preference number: 5 (lower is better) Translates to: AAALRRWPPRRPAGC*AGRRRMAARPCPPP Trigger: AGGCGGCGGGCATGGACGCGCTGCCATCCTCCGCCTTCCTGCTCAGCAACCTGCTGGACGCCGTGGTGGCCACCGCCGAAGAGCCGCCGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | GATGGCAGCGCGTCCATGCCCGCCGCCTCGGCCAGGACCACCTTCTaGTCACATACGGGGCAGCGCAGCTTCAGCGCCTCGGCGGGGCCC | + |
Preference number: 5 (lower is better) Translates to: DGSASMPAASARTTF*SHTGQRSFSASAGP Trigger: GGGCCCCGCCGAGGCGCTGAAGCTGCGCTGCCCCGTATGTGACCAGAAGGTGGTCCTGGCCGAGGCGGCGGGCATGGACGCGCTGCCATC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | CGCACAGGTGTTCCTGGCAGTCGAGGCAGCGCGACGAGGCGGCGTTaGCCTCGTCGCAGGAGCTGCAGCCGTGCGGCCGGCGCATCAGCA | + |
Preference number: 5 (lower is better) Translates to: RTGVPGSRGSATRRR*PRRRSCSRAAGASA Trigger: TGCTGATGCGCCGGCCGCACGGCTGCAGCTCCTGCGACGAGGGCAACGCCGCCTCGTCGCGCTGCCTCGACTGCCAGGAACACCTGTGCG 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | CGTGGTGCTGGCAGAAGCCGAGGCGCTCCGGGAACACCGAGAGAATaGAGAAGGGCGCGCCCGCGAAGGGCGGCCCGAGCCCCAGCTGCT | + |
Preference number: 5 (lower is better) Translates to: RGAGRSRGAPGTPRE*RRARPRRAARAPAA Trigger: AGCAGCTGGGGCTCGGGCCGCCCTTCGCGGGCGCGCCCTTCTCCATTCTCTCGGTGTTCCCGGAGCGCCTCGGCTTCTGCCAGCACCACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | CGGCCGCAGGCCCCGGAGGGCCGCGCTCGATGTAATGGTCCTTGGTaGGGCGGACGCGCTGGTGCGCGCGGACACAGTTGTCGCACAGGT | + |
Preference number: 5 (lower is better) Translates to: RPQAPEGRARCNGPW*GGRAGARGHSCRTG Trigger: ACCTGTGCGACAACTGTGTCCGCGCGCACCAGCGCGTCCGCCTCACCAAGGACCATTACATCGAGCGCGGCCCTCCGGGGCCTGCGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | CGGACGCGCTGGTGCGCGCGGACACAGTTGTCGCACAGGTGTTCCTaGCAGTCGAGGCAGCGCGACGAGGCGGCGTTGCCCTCGTCGCAG | + |
Preference number: 5 (lower is better) Translates to: RTRWCARTQLSHRCS*QSRQRDEAALPSSQ Trigger: CTGCGACGAGGGCAACGCCGCCTCGTCGCGCTGCCTCGACTGCCAGGAACACCTGTGCGACAACTGTGTCCGCGCGCACCAGCGCGTCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | CGGGCCAGCAGGATGTCCAGGGCGCGGCCCTCTTCCAGGACCTGCTaGACGGCGCTGATGGTGCTCTCCAGCTTGCTGAGACTCTGCCGC | + |
Preference number: 5 (lower is better) Translates to: RASRMSRARPSSRTC*TALMVLSSLLRLCR Trigger: GCGGCAGAGTCTCAGCAAGCTGGAGAGCACCATCAGCGCCGTGCAGCAGGTCCTGGAAGAGGGCCGCGCCCTGGACATCCTGCTGGCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | TCTTGGGGCTGCAGGAGGCCTCGGATGGTCTTGAGCTCCTGCACCTaGGCCAGCATCCGGTCTCGGGCCAGCAGGATGTCCAGGGCGCGG | + |
Preference number: 5 (lower is better) Translates to: SWGCRRPRMVLSSCT*ASIRSRASRMSRAR Trigger: CCGCGCCCTGGACATCCTGCTGGCCCGAGACCGGATGCTGGCCCAGGTGCAGGAGCTCAAGACCATCCGAGGCCTCCTGCAGCCCCAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | CCGACGACGTGGAAGTCTGCGAGGACGACGACGAGGCGGACGAGTTaGAGGAGAGCGGCGCGGGCGAGCCGCACATCTCCTTGCACAGCA | + |
Preference number: 5 (lower is better) Translates to: PTTWKSARTTTRRTS*RRAARASRTSPCTA Trigger: TGCTGTGCAAGGAGATGTGCGGCTCGCCCGCGCCGCTCTCCTCCAACTCGTCCGCCTCGTCGTCGTCCTCGCAGACTTCCACGTCGTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | TCTCGGGCCAGCAGGATGTCCAGGGCGCGGCCCTCTTCCAGGACCTaGTGCACGGCGCTGATGGTGCTCTCCAGCTTGCTGAGACTCTGC | + |
Preference number: 5 (lower is better) Translates to: SRASRMSRARPSSRT*CTALMVLSSLLRLC Trigger: GCAGAGTCTCAGCAAGCTGGAGAGCACCATCAGCGCCGTGCAGCAGGTCCTGGAAGAGGGCCGCGCCCTGGACATCCTGCTGGCCCGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | CTACCGCTGTCTGCGGAACAGGATTTGTGGCAGGGAAAGCCAGACTGGCTGAGAGCATGGTGCCGGTGGTaGCTGTGGCCGCCCGCGCCC | + |
Preference number: 5 (lower is better) Translates to: LPLSAEQDLWQGKPDWLRAWCRW*LWPPAP Trigger: GGGCGCGGGCGGCCACAGCAACCACCGGCACCATGC...TCTCAGCCAGTCTGGCTTTCCCTGCCACAAATCCTGTTCCGCAGACAGCGGTAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | TCATCTTCTTGGGGCTGCAGGAGGCCTCGGATGGTCTTGAGCTCCTaGACCTGGGCCAGCATCCGGTCTCGGGCCAGCAGGATGTCCAGG | + |
Preference number: 5 (lower is better) Translates to: SSSWGCRRPRMVLSS*TWASIRSRASRMSR Trigger: CCTGGACATCCTGCTGGCCCGAGACCGGATGCTGGCCCAGGTGCAGGAGCTCAAGACCATCCGAGGCCTCCTGCAGCCCCAAGAAGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | GACTGGACCACCTTCGCCTTCATCTCCACCTGTTCTGCCACAGTCTaGGCCTGCTCGATGCTCAGCTGGAGAGCCTGGCGGCCCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: DWTTFAFISTCSATV*ACSMLSWRAWRPCW Trigger: CCAGCAGGGCCGCCAGGCTCTCCAGCTGAGCATCGAGCAGGCCCAGACTGTGGCAGAACAGGTGGAGATGAAGGCGAAGGTGGTCCAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | CATCCTGGAGGTAGGCGAAGCTGTGGCCACCGTGGCGGCCCAGCGTaGACTCTCTGCAGATGGGGACAGAGCAGGTGTCACAGTAGAGAT | + |
Preference number: 5 (lower is better) Translates to: HPGGRRSCGHRGGPA*TLCRWGQSRCHSRD Trigger: ATCTCTACTGTGACACCTGCTCTGTCCCCATCTGCAGAGAGTGCACGCTGGGCCGCCACGGTGGCCACAGCTTCGCCTACCTCCAGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | CTTCCTGGTCCACAGCCACACCCTGTGGTCGCAGGAACTGCCCATTaGCCGAGCCCTCCGAACCCAAGAAGCGGGCAGATTGGCAATCAG | + |
Preference number: 5 (lower is better) Translates to: LPGPQPHPVVAGTAH*PSPPNPRSGQIGNQ Trigger: CTGATTGCCAATCTGCCCGCTTCTTGGGTTCGGAGGGCTCGGGCAATGGGCAGTTCCTGCGACCACAGGGTGTGGCTGTGGACCAGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | ATTCTCCCTTCCTGGTCCACAGCCACACCCTGTGGTCGCAGGAACTaGCCATTGCCCGAGCCCTCCGAACCCAAGAAGCGGGCAGATTGG | + |
Preference number: 5 (lower is better) Translates to: ILPSWSTATPCGRRN*PLPEPSEPKKRADW Trigger: CCAATCTGCCCGCTTCTTGGGTTCGGAGGGCTCGGGCAATGGGCAGTTCCTGCGACCACAGGGTGTGGCTGTGGACCAGGAAGGGAGAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | CGAAGCTGTGGCCACCGTGGCGGCCCAGCGTGCACTCTCTGCAGATaGGGACAGAGCAGGTGTCACAGTAGAGATGCAGGACCTCATCGT | + |
Preference number: 5 (lower is better) Translates to: RSCGHRGGPACTLCR*GQSRCHSRDAGPHR Trigger: ACGATGAGGTCCTGCATCTCTACTGTGACACCTGCTCTGTCCCCATCTGCAGAGAGTGCACGCTGGGCCGCCACGGTGGCCACAGCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | CACTTCTGCACCAAACAGGTTTCCGTCGGGGCCGAGGACCACAACTaGCATCAGGTCACCTCCCGAATGGCGGGGCTCACCATCGTGGTC | + |
Preference number: 5 (lower is better) Translates to: HFCTKQVSVGAEDHN*HQVTSRMAGLTIVV Trigger: GACCACGATGGTGAGCCCCGCCATTCGGGAGGTGACCTGATGTCAGTTGTGGTCCTCGGCCCCGACGGAAACCTGTTTGGTGCAGAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | CTTGACCTCAGACTGGACCACCTTCGCCTTCATCTCCACCTGTTCTaGCACAGTCTGGGCCTGCTCGATGCTCAGCTGGAGAGCCTGGCG | + |
Preference number: 5 (lower is better) Translates to: LDLRLDHLRLHLHLF*HSLGLLDAQLESLA Trigger: CGCCAGGCTCTCCAGCTGAGCATCGAGCAGGCCCAGACTGTGGCAGAACAGGTGGAGATGAAGGCGAAGGTGGTCCAGTCTGAGGTCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | ATCCTGCGGGAGGCGTCACAAGCCACCCCAGCCGGTCGGTCAAACTaGCCAGGACGAGACCCAAGGGTACCAAACTTGTGGTGGAAGGAA | + |
Preference number: 5 (lower is better) Translates to: ILREASQATPAGRSN*PGRDPRVPNLWWKE Trigger: TTCCTTCCACCACAAGTTTGGTACCCTTGGGTCTCGTCCTGGGCAGTTTGACCGACCGGCTGGGGTGGCTTGTGACGCCTCCCGCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | TACAGGGCCTGGTCAGGGGGCGTGAACATAATGCGGTCATCTTCTTaGGGCTGCAGGAGGCCTCGGATGGTCTTGAGCTCCTGCACCTGG | + |
Preference number: 5 (lower is better) Translates to: YRAWSGGVNIMRSSS*GCRRPRMVLSSCTW Trigger: CCAGGTGCAGGAGCTCAAGACCATCCGAGGCCTCCTGCAGCCCCAAGAAGATGACCGCATTATGTTCACGCCCCCTGACCAGGCCCTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGCGCAGGAACTGCCCATaGCCCGAGCCCTCCGAACCC | + |
Preference number: 5 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLRRNCP*PEPSEP Trigger: GGGTTCGGAGGGCTCGGGCAATGGGCAGTTCCTGCG...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | AAAGTCCACCACGACGATCAATCCATCCGGGGTGACCGCGATACCTaGGGGGCGGTCCATCTGCCCGAAGCCACTCCCTTGAGCACCAAA | + |
Preference number: 5 (lower is better) Translates to: KVHHDDQSIRGDRDT*GAVHLPEATPLSTK Trigger: TTTGGTGCTCAAGGGAGTGGCTTCGGGCAGATGGACCGCCCCTCAGGTATCGCGGTCACCCCGGATGGATTGATCGTCGTGGTGGACTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | TTCGATTGTTGCCAAAGTCCACCACGACGATCAATCCATCCGGGGTaGCCGCGATACCTGAGGGGCGGTCCATCTGCCCGAAGCCACTCC | + |
Preference number: 5 (lower is better) Translates to: FDCCQSPPRRSIHPG*PRYLRGGPSARSHS Trigger: GGAGTGGCTTCGGGCAGATGGACCGCCCCTCAGGTATCGCGGTCACCCCGGATGGATTGATCGTCGTGGTGGACTTTGGCAACAATCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | TCCAGGGCCTTCTTGTGGCGAGCTGTGACGGCCTTGACCTCAGACTaGACCACCTTCGCCTTCATCTCCACCTGTTCTGCCACAGTCTGG | + |
Preference number: 5 (lower is better) Translates to: SRAFLWRAVTALTSD*TTFAFISTCSATVW Trigger: CCAGACTGTGGCAGAACAGGTGGAGATGAAGGCGAAGGTGGTCCAGTCTGAGGTCAAGGCCGTCACAGCTCGCCACAAGAAGGCCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | ATCGGCTACGATGATTCTCCCTTCCTGGTCCACAGCCACACCCTGTaGTCGCAGGAACTGCCCATTGCCCGAGCCCTCCGAACCCAAGAA | + |
Preference number: 5 (lower is better) Translates to: IGYDDSPFLVHSHTL*SQELPIARALRTQE Trigger: TTCTTGGGTTCGGAGGGCTCGGGCAATGGGCAGTTCCTGCGACCACAGGGTGTGGCTGTGGACCAGGAAGGGAGAATCATCGTAGCCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | ACCGCGATACCTGAGGGGCGGTCCATCTGCCCGAAGCCACTCCCTTaGGCACCAAACTTGCACAGGAAGCTGCCATTGGCCTCAAACATC | + |
Preference number: 5 (lower is better) Translates to: TAIPEGRSICPKPLP*APNLHRKLPLASNI Trigger: GATGTTTGAGGCCAATGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGGAGTGGCTTCGGGCAGATGGACCGCCCCTCAGGTATCGCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | ATGGTGCTCTCCAGCTTGCTGAGACTCTGCCGCAGCTTCTCCACCTaGAGGAACAGAGACTTCGCCTTCACCTGCCGGATCTTCTCCACC | + |
Preference number: 5 (lower is better) Translates to: MVLSSLLRLCRSFST*RNRDFAFTCRIFST Trigger: GGTGGAGAAGATCCGGCAGGTGAAGGCGAAGTCTCTGTTCCTGCAGGTGGAGAAGCTGCGGCAGAGTCTCAGCAAGCTGGAGAGCACCAT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | AGGGGCGGTCCATCTGCCCGAAGCCACTCCCTTGAGCACCAAACTTaGACAGGAAGCTGCCATTGGCCTCAAACATCTGCACGCGGTGAT | + |
Preference number: 5 (lower is better) Translates to: RGGPSARSHSLEHQT*TGSCHWPQTSARGD Trigger: ATCACCGCGTGCAGATGTTTGAGGCCAATGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGGAGTGGCTTCGGGCAGATGGACCGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | GACCATCCAAAGTGTCTTCATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTGCGCGCGGACACAGTaGTCGCACAGGTGTTCCTGG | + |
Preference number: 5 (lower is better) Translates to: DHPKCLHPGSLYGPTLSSCARTQ*SHRCSW Trigger: CCAGGAACACCTGTGCGACAACTGTGTCCGCGCGCA...ACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGATGAAGACACTTTGGATGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | CCCGAGCCCTCCGAACCCAAGAAGCGGGCAGATTGGCAATCAGGGTaGATAACCAGAAGCCGGTGGTTGTTGAAGTCGGTGACTACCAGG | + |
Preference number: 5 (lower is better) Translates to: PEPSEPKKRADWQSG*ITRSRWLLKSVTTR Trigger: CCTGGTAGTCACCGACTTCAACAACCACCGGCTTCTGGTTATTCACCCTGATTGCCAATCTGCCCGCTTCTTGGGTTCGGAGGGCTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | GACCCCGTCCGGTCCGAACAACTGGATGCGATGATTCCGGGTGTCTaGAACGAGGATCTTGCCCTCAGAATTCACTGCTACATCCCACGG | + |
Preference number: 5 (lower is better) Translates to: DPVRSEQLDAMIPGV*NEDLALRIHCYIPR Trigger: CCGTGGGATGTAGCAGTGAATTCTGAGGGCAAGATCCTCGTTTCAGACACCCGGAATCATCGCATCCAGTTGTTCGGACCGGACGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | TGGCCTCAAACATCTGCACGCGGTGATTTCTGGAATCGGCTACGATaGTTCTCCCTTCCTGGTCCACAGCCACACCCTGTGGTCGCAGGA | + |
Preference number: 5 (lower is better) Translates to: WPQTSARGDFWNRLR*FSLPGPQPHPVVAG Trigger: TCCTGCGACCACAGGGTGTGGCTGTGGACCAGGAAGGGAGAATCATCGTAGCCGATTCCAGAAATCACCGCGTGCAGATGTTTGAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | TCTGCCCGAAGCCACTCCCTTGAGCACCAAACTTGCACAGGAAGCTaGCATTGGCCTCAAACATCTGCACGCGGTGATTTCTGGAATCGG | + |
Preference number: 5 (lower is better) Translates to: SARSHSLEHQTCTGS*HWPQTSARGDFWNR Trigger: CCGATTCCAGAAATCACCGCGTGCAGATGTTTGAGGCCAATGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGGAGTGGCTTCGGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | GTCGGTGACTACCAGGTGACCTTCATTGTTGAAAGCCACGCCCCGTaGAGAGTCGAAGTGCTTCCAGAGAGATCCCTCGAAGCCGTACTT | + |
Preference number: 5 (lower is better) Translates to: VGDYQVTFIVESHAP*RVEVLPERSLEAVL Trigger: AAGTACGGCTTCGAGGGATCTCTCTGGAAGCACTTCGACTCTCCACGGGGCGTGGCTTTCAACAATGAAGGTCACCTGGTAGTCACCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGAGAAGCCGGTGGTTGTaGAAGTCGGTGACTACCAGG | + |
Preference number: 5 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLRSRWL*KSVTTR Trigger: CCTGGTAGTCACCGACTTCAACAACCACCGGCTTCT...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | CGGCCCGACTTGACCACGACCTTGAAGGGGCTGTTCTCTATATGCTaGTTGTACAATGTCACCGACACCAAGTGCTCACCCTCAAGCTGG | + |
Preference number: 5 (lower is better) Translates to: RPDLTTTLKGLFSIC*LYNVTDTKCSPSSW Trigger: CCAGCTTGAGGGTGAGCACTTGGTGTCGGTGACATTGTACAATCAGCATATAGAGAACAGCCCCTTCAAGGTCGTGGTCAAGTCGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 90 bp | AGCCGTACTTGTTCAGGAAGACCCCGTCCGGTCCGAACAACTGGATaGGATGATTCCGGGTGTCTGAAACGAGGATCTTGCCCTCAGAAT | + |
Preference number: 5 (lower is better) Translates to: SRTCSGRPRPVRTTG*DDSGCLKRGSCPQN Trigger: ATTCTGAGGGCAAGATCCTCGTTTCAGACACCCGGAATCATCGCATCCAGTTGTTCGGACCGGACGGGGTCTTCCTGAACAAGTACGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | CGAAGCCACTCCCTTGAGCACCAAACTTGCACAGGAAGCTGCCATTaGCCTCAAACATCTGCACGCGGTGATTTCTGGAATCGGCTACGA | + |
Preference number: 5 (lower is better) Translates to: RSHSLEHQTCTGSCH*PQTSARGDFWNRLR Trigger: TCGTAGCCGATTCCAGAAATCACCGCGTGCAGATGTTTGAGGCCAATGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGGAGTGGCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGGACTTGACCACGACCTaGAAGGGGCTGTTCTCTATA | + |
Preference number: 5 (lower is better) Translates to: IPAASMAQHCPVLFRVPLDLTTT*KGLFSI Trigger: TATAGAGAACAGCCCCTTCAAGGTCGTGGTCAAGTC...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGCAAGAAGCGGGCAGATaGGCAATCAGGGTGAATAAC | + |
Preference number: 5 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLQEAGR*AIRVNN Trigger: GTTATTCACCCTGATTGCCAATCTGCCCGCTTCTTG...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | GCCTTTAATGGTGGAAGGTTCTCCATCCGGTCAGAGAAGCAGCTCCTACCGCTGATGAGGATTCGATTGTaGCCAAAGTCCACCACGACG | + |
Preference number: 5 (lower is better) Translates to: AFNGGRFSIRSEKQLLPLMRIRL*PKSTTT Trigger: CGTCGTGGTGGACTTTGGCAACAATCGAATCCTCAT...CAGCGGTAGGAGCTGCTTCTCTGACCGGATGGAGAACCTTCCACCATTAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | TACTTGTTCAGGAAGACCCCGTCCGGTCCGAACAACTGGATGCGATaGTTCCGGGTGTCTGAAACGAGGATCTTGCCCTCAGAATTCACT | + |
Preference number: 5 (lower is better) Translates to: YLFRKTPSGPNNWMR*FRVSETRILPSEFT Trigger: AGTGAATTCTGAGGGCAAGATCCTCGTTTCAGACACCCGGAATCATCGCATCCAGTTGTTCGGACCGGACGGGGTCTTCCTGAACAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 90 bp | AACTTGCACAGGAAGCTGCCATTGGCCTCAAACATCTGCACGCGGTaGTTTCTGGAATCGGCTACGATGATTCTCCCTTCCTGGTCCACA | + |
Preference number: 5 (lower is better) Translates to: NLHRKLPLASNICTR*FLESATMILPSWST Trigger: TGTGGACCAGGAAGGGAGAATCATCGTAGCCGATTCCAGAAATCACCGCGTGCAGATGTTTGAGGCCAATGGCAGCTTCCTGTGCAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | ATCCCGGCAGCCTCTATGGCCCAACACTGTCCAGTTCTGTTTAGGGTACCCTTGTCTGAAACGAGGATCTaGCCCTCAGAATTCACTGCT | + |
Preference number: 5 (lower is better) Translates to: IPAASMAQHCPVLFRVPLSETRI*PSEFTA Trigger: AGCAGTGAATTCTGAGGGCAAGATCCTCGTTTCAGA...CAAGGGTACCCTAAACAGAACTGGACAGTGTTGGGCCATAGAGGCTGCCGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCGAGCCGCACATCTCCTaGCACAGCAGGCAGATCTGG | + |
Preference number: 5 (lower is better) Translates to: NWEEICLGCLVSSPAFLLEPHIS*HSRQIW Trigger: CCAGATCTGCCTGCTGTGCAAGGAGATGTGCGGCTC...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCATGGTGCTCTCCAGCTaGCTGAGACTCTGCCGCAGC | + |
Preference number: 5 (lower is better) Translates to: NWEEICLGCLVSSPAFLLMVLSS*LRLCRS Trigger: GCTGCGGCAGAGTCTCAGCAAGCTGGAGAGCACCAT...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | AACTGGGAAGAAATTTGCTTGGGATGTCTTGTGTCAAGTCCAGCTTTTCTCCTCAATGCGGTCATCTTCTaGGGGCTGCAGGAGGCCTCG | + |
Preference number: 5 (lower is better) Translates to: NWEEICLGCLVSSPAFLLNAVIF*GLQEAS Trigger: CGAGGCCTCCTGCAGCCCCAAGAAGATGACCGCATT...GAGGAGAAAAGCTGGACTTGACACAAGACATCCCAAGCAAATTTCTTCCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | TCCTACACTTCCTGTTGGGTGGTTTGGTTTGTAAATCCTTTACATTCAAAGGCCCCCTCGAAGCCGTACTaGTTCAGGAAGACCCCGTCC | + |
Preference number: 5 (lower is better) Translates to: SYTSCWVVWFVNPLHSKAPSKPY*FRKTPS Trigger: GGACGGGGTCTTCCTGAACAAGTACGGCTTCGAGGG...GGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 90 bp | AGGGTACCAAACTTGTGGTGGAAGGAACCACAGGGCTTAAACACCTaGATTCTGTTATTGCTTCGGTCAGCCACTATGATGAAACCCTCC | + |
Preference number: 5 (lower is better) Translates to: RVPNLWWKEPQGLNT*ILLLLRSATMMKPS Trigger: GGAGGGTTTCATCATAGTGGCTGACCGAAGCAATAACAGAATCCAGGTGTTTAAGCCCTGTGGTTCCTTCCACCACAAGTTTGGTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | GTGGAGTTCCTGCCGTGCAATGGGGGTCAGAAACTGGGTTTTAGATCTATGTTGTTAAACTGCCCGTTCTaGGTGCCTTTCTCACCAAAC | + |
Preference number: 5 (lower is better) Translates to: VEFLPCNGGQKLGFRSMLLNCPF*VPFSPN Trigger: GTTTGGTGAGAAAGGCACCAAGAACGGGCAGTTTAA...CAACATAGATCTAAAACCCAGTTTCTGACCCCCATTGCACGGCAGGAACTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | CAAAAGTTCTCCAACTATGATCACAATTCCTTAGAAGCCAGCCCTTACACTGATCCCGAAGCCACTCCCTaGAGCACCAAACTTGCACAG | + |
Preference number: 5 (lower is better) Translates to: QKFSNYDHNSLEASPYTDPEATP*STKLAQ Trigger: CTGTGCAAGTTTGGTGCTCAAGGGAGTGGCTTCGGG...ATCAGTGTAAGGGCTGGCTTCTAAGGAATTGTGATCATAGTTGGAGAACTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS-3UTR CAA 90 bp | TCCTACACTTCCTGTTGGGTGGTTTGGTTTGTAAATCCTTTACATTCAAAGGCCAAGATGAGGATTCGATaGTTGCCAAAGTCCACCACG | + |
Preference number: 5 (lower is better) Translates to: SYTSCWVVWFVNPLHSKAKMRIR*LPKSTT Trigger: CGTGGTGGACTTTGGCAACAATCGAATCCTCATCTT...GGCCTTTGAATGTAAAGGATTTACAAACCAAACCACCCAACAGGAAGTGTAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | GAGGCGGCGTTGCCCTCGTCGCAGGAGCTGCAGCCGTaGGGCCGGCGCATCAGCAGCGACCCGGGGGAGGCG | + |
Preference number: 6 (lower is better) Translates to: EAALPSSQELQP*GRRISSDPGEA Trigger: CGCCTCCCCCGGGTCGCTGCTGATGCGCCGGCCGCACGGCTGCAGCTCCTGCGACGAGGGCAACGCCGCCTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | CCGGGGCCGCCGCCGCCCGCCGACGACGTGGAAGTCTaGGAGGACGACGACGAGGCGGACGAGTTGGAGGAG | + |
Preference number: 6 (lower is better) Translates to: PGPPPPADDVEV*EDDDEADELEE Trigger: CTCCTCCAACTCGTCCGCCTCGTCGTCGTCCTCGCAGACTTCCACGTCGTCGGCGGGCGGCGGCGGCCCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | GTTCCTGGCAGTCGAGGCAGCGCGACGAGGCGGCGTTaGCCTCGTCGCAGGAGCTGCAGCCGTGCGGCCGGC | + |
Preference number: 6 (lower is better) Translates to: VPGSRGSATRRR*PRRRSCSRAAG Trigger: GCCGGCCGCACGGCTGCAGCTCCTGCGACGAGGGCAACGCCGCCTCGTCGCGCTGCCTCGACTGCCAGGAAC 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | GGCAGAAGCCGAGGCGCTCCGGGAACACCGAGAGAATaGAGAAGGGCGCGCCCGCGAAGGGCGGCCCGAGCC | + |
Preference number: 6 (lower is better) Translates to: GRSRGAPGTPRE*RRARPRRAARA Trigger: GGCTCGGGCCGCCCTTCGCGGGCGCGCCCTTCTCCATTCTCTCGGTGTTCCCGGAGCGCCTCGGCTTCTGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 72 bp | TGTTCCTGGCAGTCGAGGCAGCGCGACGAGGCGGCGTaGCCCTCGTCGCAGGAGCTGCAGCCGTGCGGCCGG | + |
Preference number: 6 (lower is better) Translates to: CSWQSRQRDEAA*PSSQELQPCGR Trigger: CCGGCCGCACGGCTGCAGCTCCTGCGACGAGGGCAACGCCGCCTCGTCGCGCTGCCTCGACTGCCAGGAACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 90 bp | TCGCACAGGTGTTCCTGGCAGTCGAGGCAGCGCGACGAGGCGGCGTaGCCCTCGTCGCAGGAGCTGCAGCCGTGCGGCCGGCGCATCAGC | + |
Preference number: 6 (lower is better) Translates to: SHRCSWQSRQRDEAA*PSSQELQPCGRRIS Trigger: GCTGATGCGCCGGCCGCACGGCTGCAGCTCCTGCGACGAGGGCAACGCCGCCTCGTCGCGCTGCCTCGACTGCCAGGAACACCTGTGCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | GCGTCCATGCCCGCCGCCTCGGCCAGGACCACCTTCTaGTCACATACGGGGCAGCGCAGCTTCAGCGCCTCG | + |
Preference number: 6 (lower is better) Translates to: ASMPAASARTTF*SHTGQRSFSAS Trigger: CGAGGCGCTGAAGCTGCGCTGCCCCGTATGTGACCAGAAGGTGGTCCTGGCCGAGGCGGCGGGCATGGACGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | GCCCCGGAGGGCCGCGCTCGATGTAATGGTCCTTGGTaGGGCGGACGCGCTGGTGCGCGCGGACACAGTTGT | + |
Preference number: 6 (lower is better) Translates to: APEGRARCNGPW*GGRAGARGHSC Trigger: ACAACTGTGTCCGCGCGCACCAGCGCGTCCGCCTCACCAAGGACCATTACATCGAGCGCGGCCCTCCGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | TGGGGCTGCAGGAGGCCTCGGATGGTCTTGAGCTCCTaGACCTGGGCCAGCATCCGGTCTCGGGCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: WGCRRPRMVLSS*TWASIRSRASR Trigger: CCTGCTGGCCCGAGACCGGATGCTGGCCCAGGTGCAGGAGCTCAAGACCATCCGAGGCCTCCTGCAGCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | AGGGCCTGCAGAGCTTGCCCTCCCCGTCACCTTCACTaGCGAAGCTCAGCCCGGGGAGCCCGATGCCCACGT | + |
Preference number: 6 (lower is better) Translates to: RACRACPPRHLH*RSSARGARCPR Trigger: ACGTGGGCATCGGGCTCCCCGGGCTGAGCTTCGGCAGTGAAGGTGACGGGGAGGGCAAGCTCTGCAGGCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | TGGTGCGCGCGGACACAGTTGTCGCACAGGTGTTCCTaGCAGTCGAGGCAGCGCGACGAGGCGGCGTTGCCC | + |
Preference number: 6 (lower is better) Translates to: WCARTQLSHRCS*QSRQRDEAALP Trigger: GGGCAACGCCGCCTCGTCGCGCTGCCTCGACTGCCAGGAACACCTGTGCGACAACTGTGTCCGCGCGCACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | TGGAAGTCTGCGAGGACGACGACGAGGCGGACGAGTTaGAGGAGAGCGGCGCGGGCGAGCCGCACATCTCCT | + |
Preference number: 6 (lower is better) Translates to: WKSARTTTRRTS*RRAARASRTSP Trigger: AGGAGATGTGCGGCTCGCCCGCGCCGCTCTCCTCCAACTCGTCCGCCTCGTCGTCGTCCTCGCAGACTTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 72 bp | TTGGTGAGGCGGACGCGCTGGTGCGCGCGGACACAGTaGTCGCACAGGTGTTCCTGGCAGTCGAGGCAGCGC | + |
Preference number: 6 (lower is better) Translates to: LVRRTRWCARTQ*SHRCSWQSRQR Trigger: GCGCTGCCTCGACTGCCAGGAACACCTGTGCGACAACTGTGTCCGCGCGCACCAGCGCGTCCGCCTCACCAA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | GGTAGGCGAAGCTGTGGCCACCGTGGCGGCCCAGCGTaGACTCTCTGCAGATGGGGACAGAGCAGGTGTCAC | + |
Preference number: 6 (lower is better) Translates to: GRRSCGHRGGPA*TLCRWGQSRCH Trigger: GTGACACCTGCTCTGTCCCCATCTGCAGAGAGTGCACGCTGGGCCGCCACGGTGGCCACAGCTTCGCCTACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | AGCAGGATGTCCAGGGCGCGGCCCTCTTCCAGGACCTaGTGCACGGCGCTGATGGTGCTCTCCAGCTTGCTG | + |
Preference number: 6 (lower is better) Translates to: SRMSRARPSSRT*CTALMVLSSLL Trigger: CAGCAAGCTGGAGAGCACCATCAGCGCCGTGCAGCAGGTCCTGGAAGAGGGCCGCGCCCTGGACATCCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | GCCTTCATCTCCACCTGTTCTGCCACAGTCTGGGCCTaGTCGATGCTCAGCTGGAGAGCCTGGCGGCCCTGC | + |
Preference number: 6 (lower is better) Translates to: AFISTCSATVWA*SMLSWRAWRPC Trigger: GCAGGGCCGCCAGGCTCTCCAGCTGAGCATCGAGCAGGCCCAGACTGTGGCAGAACAGGTGGAGATGAAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | AGGATGTCCAGGGCGCGGCCCTCTTCCAGGACCTGCTaGACGGCGCTGATGGTGCTCTCCAGCTTGCTGAGA | + |
Preference number: 6 (lower is better) Translates to: RMSRARPSSRTC*TALMVLSSLLR Trigger: TCTCAGCAAGCTGGAGAGCACCATCAGCGCCGTGCAGCAGGTCCTGGAAGAGGGCCGCGCCCTGGACATCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | CACGACGATCAATCCATCCGGGGTGACCGCGATACCTaGGGGGCGGTCCATCTGCCCGAAGCCACTCCCTTG | + |
Preference number: 6 (lower is better) Translates to: HDDQSIRGDRDT*GAVHLPEATPL Trigger: CAAGGGAGTGGCTTCGGGCAGATGGACCGCCCCTCAGGTATCGCGGTCACCCCGGATGGATTGATCGTCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | CCACAGCCACACCCTGTGGTCGCAGGAACTGCCCATTaGCCGAGCCCTCCGAACCCAAGAAGCGGGCAGATT | + |
Preference number: 6 (lower is better) Translates to: PQPHPVVAGTAH*PSPPNPRSGQI Trigger: AATCTGCCCGCTTCTTGGGTTCGGAGGGCTCGGGCAATGGGCAGTTCCTGCGACCACAGGGTGTGGCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 72 bp | TCCACAGCCACACCCTGTGGTCGCAGGAACTGCCCATaGCCCGAGCCCTCCGAACCCAAGAAGCGGGCAGAT | + |
Preference number: 6 (lower is better) Translates to: STATPCGRRNCP*PEPSEPKKRAD Trigger: ATCTGCCCGCTTCTTGGGTTCGGAGGGCTCGGGCAATGGGCAGTTCCTGCGACCACAGGGTGTGGCTGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 90 bp | CCTTCCTGGTCCACAGCCACACCCTGTGGTCGCAGGAACTGCCCATaGCCCGAGCCCTCCGAACCCAAGAAGCGGGCAGATTGGCAATCA | + |
Preference number: 6 (lower is better) Translates to: PSWSTATPCGRRNCP*PEPSEPKKRADWQS Trigger: TGATTGCCAATCTGCCCGCTTCTTGGGTTCGGAGGGCTCGGGCAATGGGCAGTTCCTGCGACCACAGGGTGTGGCTGTGGACCAGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | ACCAAACAGGTTTCCGTCGGGGCCGAGGACCACAACTaGCATCAGGTCACCTCCCGAATGGCGGGGCTCACC | + |
Preference number: 6 (lower is better) Translates to: TKQVSVGAEDHN*HQVTSRMAGLT Trigger: GGTGAGCCCCGCCATTCGGGAGGTGACCTGATGTCAGTTGTGGTCCTCGGCCCCGACGGAAACCTGTTTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | CCTGAGGGGCGGTCCATCTGCCCGAAGCCACTCCCTTaGGCACCAAACTTGCACAGGAAGCTGCCATTGGCC | + |
Preference number: 6 (lower is better) Translates to: PEGRSICPKPLP*APNLHRKLPLA Trigger: GGCCAATGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGGAGTGGCTTCGGGCAGATGGACCGCCCCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | TGCCAAAGTCCACCACGACGATCAATCCATCCGGGGTaGCCGCGATACCTGAGGGGCGGTCCATCTGCCCGA | + |
Preference number: 6 (lower is better) Translates to: CQSPPRRSIHPG*PRYLRGGPSAR Trigger: TCGGGCAGATGGACCGCCCCTCAGGTATCGCGGTCACCCCGGATGGATTGATCGTCGTGGTGGACTTTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | GAGGCGTCACAAGCCACCCCAGCCGGTCGGTCAAACTaGCCAGGACGAGACCCAAGGGTACCAAACTTGTGG | + |
Preference number: 6 (lower is better) Translates to: EASQATPAGRSN*PGRDPRVPNLW Trigger: CCACAAGTTTGGTACCCTTGGGTCTCGTCCTGGGCAGTTTGACCGACCGGCTGGGGTGGCTTGTGACGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 90 bp | GTACAGGGCCTGGTCAGGGGGCGTGAACATAATGCGGTCATCTTCTaGGGGCTGCAGGAGGCCTCGGATGGTCTTGAGCTCCTGCACCTG | + |
Preference number: 6 (lower is better) Translates to: VQGLVRGREHNAVIF*GLQEASDGLELLHL Trigger: CAGGTGCAGGAGCTCAAGACCATCCGAGGCCTCCTGCAGCCCCAAGAAGATGACCGCATTATGTTCACGCCCCCTGACCAGGCCCTGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | AACAGCTCACACTCCCGATCCTCCAGGGCCTTCTTGTaGCGAGCTGTGACGGCCTTGACCTCAGACTGGACC | + |
Preference number: 6 (lower is better) Translates to: NSSHSRSSRAFL*RAVTALTSDWT Trigger: GGTCCAGTCTGAGGTCAAGGCCGTCACAGCTCGCCACAAGAAGGCCCTGGAGGATCGGGAGTGTGAGCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 72 bp | CACAACAGCTCACACTCCCGATCCTCCAGGGCCTTCTaGTGGCGAGCTGTGACGGCCTTGACCTCAGACTGG | + |
Preference number: 6 (lower is better) Translates to: HNSSHSRSSRAF*WRAVTALTSDW Trigger: CCAGTCTGAGGTCAAGGCCGTCACAGCTCGCCACAAGAAGGCCCTGGAGGATCGGGAGTGTGAGCTGTTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 90 bp | TCCACCTTCCACAACAGCTCACACTCCCGATCCTCCAGGGCCTTCTaGTGGCGAGCTGTGACGGCCTTGACCTCAGACTGGACCACCTTC | + |
Preference number: 6 (lower is better) Translates to: STFHNSSHSRSSRAF*WRAVTALTSDWTTF Trigger: GAAGGTGGTCCAGTCTGAGGTCAAGGCCGTCACAGCTCGCCACAAGAAGGCCCTGGAGGATCGGGAGTGTGAGCTGTTGTGGAAGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | AGACTGGACCACCTTCGCCTTCATCTCCACCTGTTCTaGCACAGTCTGGGCCTGCTCGATGCTCAGCTGGAG | + |
Preference number: 6 (lower is better) Translates to: RLDHLRLHLHLF*HSLGLLDAQLE Trigger: CTCCAGCTGAGCATCGAGCAGGCCCAGACTGTGGCAGAACAGGTGGAGATGAAGGCGAAGGTGGTCCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | TCCAGCTTGCTGAGACTCTGCCGCAGCTTCTCCACCTaGAGGAACAGAGACTTCGCCTTCACCTGCCGGATC | + |
Preference number: 6 (lower is better) Translates to: SSLLRLCRSFST*RNRDFAFTCRI Trigger: GATCCGGCAGGTGAAGGCGAAGTCTCTGTTCCTGCAGGTGGAGAAGCTGCGGCAGAGTCTCAGCAAGCTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | TGGTCAGGGGGCGTGAACATAATGCGGTCATCTTCTTaGGGCTGCAGGAGGCCTCGGATGGTCTTGAGCTCC | + |
Preference number: 6 (lower is better) Translates to: WSGGVNIMRSSS*GCRRPRMVLSS Trigger: GGAGCTCAAGACCATCCGAGGCCTCCTGCAGCCCCAAGAAGATGACCGCATTATGTTCACGCCCCCTGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 72 bp | CTGGTCAGGGGGCGTGAACATAATGCGGTCATCTTCTaGGGGCTGCAGGAGGCCTCGGATGGTCTTGAGCTC | + |
Preference number: 6 (lower is better) Translates to: LVRGREHNAVIF*GLQEASDGLEL Trigger: GAGCTCAAGACCATCCGAGGCCTCCTGCAGCCCCAAGAAGATGACCGCATTATGTTCACGCCCCCTGACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | TTCTTGTGGCGAGCTGTGACGGCCTTGACCTCAGACTaGACCACCTTCGCCTTCATCTCCACCTGTTCTGCC | + |
Preference number: 6 (lower is better) Translates to: FLWRAVTALTSD*TTFAFISTCSA Trigger: GGCAGAACAGGTGGAGATGAAGGCGAAGGTGGTCCAGTCTGAGGTCAAGGCCGTCACAGCTCGCCACAAGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | AGATCTGAATGCGATGATTGTCTTTGTCGGCCACTATaGTCCTGCGGGAGGCGTCACAAGCCACCCCAGCCG | + |
Preference number: 6 (lower is better) Translates to: RSECDDCLCRPL*SCGRRHKPPQP Trigger: CGGCTGGGGTGGCTTGTGACGCCTCCCGCAGGATCATAGTGGCCGACAAAGACAATCATCGCATTCAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | AGGAAGACCCCGTCCGGTCCGAACAACTGGATGCGATaGTTCCGGGTGTCTGAAACGAGGATCTTGCCCTCA | + |
Preference number: 6 (lower is better) Translates to: RKTPSGPNNWMR*FRVSETRILPS Trigger: TGAGGGCAAGATCCTCGTTTCAGACACCCGGAATCATCGCATCCAGTTGTTCGGACCGGACGGGGTCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 72 bp | TCGAAGTGCTTCCAGAGAGATCCCTCGAAGCCGTACTaGTTCAGGAAGACCCCGTCCGGTCCGAACAACTGG | + |
Preference number: 6 (lower is better) Translates to: SKCFQRDPSKPY*FRKTPSGPNNW Trigger: CCAGTTGTTCGGACCGGACGGGGTCTTCCTGAACAAGTACGGCTTCGAGGGATCTCTCTGGAAGCACTTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | AGAAGCCGGTGGTTGTTGAAGTCGGTGACTACCAGGTaGCCTTCATTGTTGAAAGCCACGCCCCGTGGAGAG | + |
Preference number: 6 (lower is better) Translates to: RSRWLLKSVTTR*PSLLKATPRGE Trigger: CTCTCCACGGGGCGTGGCTTTCAACAATGAAGGTCACCTGGTAGTCACCGACTTCAACAACCACCGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | TTCTCCACCTGCAGGAACAGAGACTTCGCCTTCACCTaGCGGATCTTCTCCACCTTCCACAACAGCTCACAC | + |
Preference number: 6 (lower is better) Translates to: FSTCRNRDFAFT*RIFSTFHNSSH Trigger: GTGTGAGCTGTTGTGGAAGGTGGAGAAGATCCGGCAGGTGAAGGCGAAGTCTCTGTTCCTGCAGGTGGAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | CACTATGTAAGTACCATTCTGCTGGTCGCTCACTTCTaGACCAAACAGGTTTCCGTCGGGGCCGAGGACCAC | + |
Preference number: 6 (lower is better) Translates to: HYVSTILLVAHF*TKQVSVGAEDH Trigger: GTGGTCCTCGGCCCCGACGGAAACCTGTTTGGTGCAGAAGTGAGCGACCAGCAGAATGGTACTTACATAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | TCCGAACCCAAGAAGCGGGCAGATTGGCAATCAGGGTaGATAACCAGAAGCCGGTGGTTGTTGAAGTCGGTG | + |
Preference number: 6 (lower is better) Translates to: SEPKKRADWQSG*ITRSRWLLKSV Trigger: CACCGACTTCAACAACCACCGGCTTCTGGTTATTCACCCTGATTGCCAATCTGCCCGCTTCTTGGGTTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | TCATTGTTGAAAGCCACGCCCCGTGGAGAGTCGAAGTaGTTCCAGAGAGATCCCTCGAAGCCGTACTTGTTC | + |
Preference number: 6 (lower is better) Translates to: SLLKATPRGESK*FQRDPSKPYLF Trigger: GAACAAGTACGGCTTCGAGGGATCTCTCTGGAAGCACTTCGACTCTCCACGGGGCGTGGCTTTCAACAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | AGCCACTCCCTTGAGCACCAAACTTGCACAGGAAGCTaGCATTGGCCTCAAACATCTGCACGCGGTGATTTC | + |
Preference number: 6 (lower is better) Translates to: SHSLEHQTCTGS*HWPQTSARGDF Trigger: GAAATCACCGCGTGCAGATGTTTGAGGCCAATGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGGAGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | TACCAGGTGACCTTCATTGTTGAAAGCCACGCCCCGTaGAGAGTCGAAGTGCTTCCAGAGAGATCCCTCGAA | + |
Preference number: 6 (lower is better) Translates to: YQVTFIVESHAP*RVEVLPERSLE Trigger: TTCGAGGGATCTCTCTGGAAGCACTTCGACTCTCCACGGGGCGTGGCTTTCAACAATGAAGGTCACCTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CAA 72 bp | TCAAACTGCCCAGGACGAGACCCAAGGGTACCAAACTaGTGGTGGAAGGAACCACAGGGCTTAAACACCTGG | + |
Preference number: 6 (lower is better) Translates to: SNCPGRDPRVPN*WWKEPQGLNTW Trigger: CCAGGTGTTTAAGCCCTGTGGTTCCTTCCACCACAAGTTTGGTACCCTTGGGTCTCGTCCTGGGCAGTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | CGGTCCGAACAACTGGATGCGATGATTCCGGGTGTCTaGAACGAGGATCTTGCCCTCAGAATTCACTGCTAC | + |
Preference number: 6 (lower is better) Translates to: RSEQLDAMIPGV*NEDLALRIHCY Trigger: GTAGCAGTGAATTCTGAGGGCAAGATCCTCGTTTCAGACACCCGGAATCATCGCATCCAGTTGTTCGGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | AGGAAGCTGCCATTGGCCTCAAACATCTGCACGCGGTaGTTTCTGGAATCGGCTACGATGATTCTCCCTTCC | + |
Preference number: 6 (lower is better) Translates to: RKLPLASNICTR*FLESATMILPS Trigger: GGAAGGGAGAATCATCGTAGCCGATTCCAGAAATCACCGCGTGCAGATGTTTGAGGCCAATGGCAGCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS GCA 72 bp | GGATGCGATGATTCCGGGTGTCTGAAACGAGGATCTTaGCCTCAGAATTCACTGCTACATCCCACGGGTAGT | + |
Preference number: 6 (lower is better) Translates to: GCDDSGCLKRGS*PQNSLLHPTGS Trigger: ACTACCCGTGGGATGTAGCAGTGAATTCTGAGGGCAAGATCCTCGTTTCAGACACCCGGAATCATCGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS CCA 72 bp | TCCCTTGAGCACCAAACTTGCACAGGAAGCTGCCATTaGCCTCAAACATCTGCACGCGGTGATTTCTGGAAT | + |
Preference number: 6 (lower is better) Translates to: SLEHQTCTGSCH*PQTSARGDFWN Trigger: ATTCCAGAAATCACCGCGTGCAGATGTTTGAGGCCAATGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |
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CDS TCA 72 bp | TTGACCACGACCTTGAAGGGGCTGTTCTCTATATGCTaGTTGTACAATGTCACCGACACCAAGTGCTCACCC | + |
Preference number: 6 (lower is better) Translates to: LTTTLKGLFSIC*LYNVTDTKCSP Trigger: GGGTGAGCACTTGGTGTCGGTGACATTGTACAATCAGCATATAGAGAACAGCCCCTTCAAGGTCGTGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111816.3 |