Pregenerated sensors for TRIM7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040350Ensembl transcript IDs: ENSMUST00000046903.6, ENSMUST00000109213.9, ENSMUST00000129674.2, ENSMUST00000155478.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTTCTTTGCCTCGCTTTGTGGACACTATGGAACAAAAGCCAGTTaGGAGGAGAGGCTAAGGAGGCTGGCCTGCCCAACCCCCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PFFASLCGHYGTKAS*EERLRRLACPTPSR Trigger: CCTGGAGGGGGTTGGGCAGGCCAGCCTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCCATAGTGTCCACAAAGCGAGGCAAAGAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR GCA 90 bp | GGAGAGGCTAAGGAGGCTGGCCTGCCCAACCCCCTCCAGGGCAGATaGTCAGGAATCCTTGTCACCAGCATGTTCTGGTGTTTGCATAGA | + |
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Preference number: 1 (lower is better) Translates to: GEAKEAGLPNPLQGR*SGILVTSMFWCLHR Trigger: TCTATGCAAACACCAGAACATGCTGGTGACAAGGATTCCTGAGCATCTGCCCTGGAGGGGGTTGGGCAGGCCAGCCTCCTTAGCCTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR GCA 90 bp | ACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTaGTCTCTGGCAGCCTTCTTGGGCAGCAGAAGTAGGGGTGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: THRASLLNQSSAPVL*SLAAFLGSRSRGVK Trigger: CTTCACACCCCTACTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR CCA 90 bp | GAACAGCCCACTCCTGCCCTTCTTTGCCTCGCTTTGTGGACACTATaGAACAAAAGCCAGTTGAGAGGAGAGGCTAAGGAGGCTGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: EQPTPALLCLALWTL*NKSQLRGEAKEAGL Trigger: CAGGCCAGCCTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCCATAGTGTCCACAAAGCGAGGCAAAGAAGGGCAGGAGTGGGCTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR TCA 90 bp | AACAAAGGGCTTCTCTGTGCAGTTTTGCTATCCTGGAACTCATGCTaGAGACCAGGCTGGCCTCGAACTCACAGTGATCTGCCGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: NKGLLCAVLLSWNSC*RPGWPRTHSDLPAL Trigger: CAAGGCCGGCAGATCACTGTGAGTTCGAGGCCAGCCTGGTCTTCAGCATGAGTTCCAGGATAGCAAAACTGCACAGAGAAGCCCTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR GCA 90 bp | TTTCATGGGCTTCCCTTCCTAACAAAGGGCTTCTCTGTGCAGTTTTaGTATCCTGGAACTCATGCTGAAGACCAGGCTGGCCTCGAACTC | + |
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Preference number: 1 (lower is better) Translates to: FHGLPFLTKGFSVQF*YPGTHAEDQAGLEL Trigger: GAGTTCGAGGCCAGCCTGGTCTTCAGCATGAGTTCCAGGATAGCAAAACTGCACAGAGAAGCCCTTTGTTAGGAAGGGAAGCCCATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR CCA 90 bp | CCCCTCCAGGGCAGATGCTCAGGAATCCTTGTCACCAGCATGTTCTaGTGTTTGCATAGATTTAGAACGTTCCAGAAAGGGTTTGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: PLQGRCSGILVTSMF*CLHRFRTFQKGFVK Trigger: CTTAACAAACCCTTTCTGGAACGTTCTAAATCTATGCAAACACCAGAACATGCTGGTGACAAGGATTCCTGAGCATCTGCCCTGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR GCA 90 bp | GTTTGCATAGATTTAGAACGTTCCAGAAAGGGTTTGTTAAGACTGTaGTTGAGCTGTGTGCATCTCTACACGGGTGCTAGCTGCATCTGT | + |
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Preference number: 1 (lower is better) Translates to: VCIDLERSRKGLLRL*LSCVHLYTGASCIC Trigger: ACAGATGCAGCTAGCACCCGTGTAGAGATGCACACAGCTCAAGCACAGTCTTAACAAACCCTTTCTGGAACGTTCTAAATCTATGCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR CCA 90 bp | TGGATGACTGCCCCACTGAATGCACCCTTTCAGAGTTGTAATGCTTaGATGATCTCTATTAATCATGATGTCACCTGTTCTGTTTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: WMTAPLNAPFQSCNA*MISINHDVTCSVCD Trigger: ATCACAAACAGAACAGGTGACATCATGATTAATAGAGATCATCCAAGCATTACAACTCTGAAAGGGTGCATTCAGTGGGGCAGTCATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR GCA 90 bp | TCGATCTCCTCTCCCACTTCCAAGCAGAGCACTAAGCAGGGAACAGCCCACTCCCCCCTCCAGGGCAGATaGTCAGGAATCCTTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: SISSPTSKQSTKQGTAHSPLQGR*SGILVT Trigger: GGTGACAAGGATTCCTGAGCATCTGCCCTGGAGGGG...GGAGTGGGCTGTTCCCTGCTTAGTGCTCTGCTTGGAAGTGGGAGAGGAGATCGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR CAA 90 bp | GTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTaGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGTAGGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VTHRASLLNQSSAPV*CSLAAFLGSRSRGV Trigger: CACACCCCTACTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAGAGCCAGGCACGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGTGCAGATCCAGCCAGACTaGCTTCTAATTGGGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: WREPGTPLIPALGRQRQVQIQPD*LLIGEH Trigger: GTGCTCCCCAATTAGAAGCCAGTCTGGCTGGATCTG...CACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCGTGCCTGGCTCTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAGCACTAAGCAGGGAACAGCCCACTCCTGCCCTTCTTTGCCTCGCTTTGGGAACAAAAGCCAGTTaGGAGGAGAGGCTAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SRALSREQPTPALLCLALGTKAS*EERLRR Trigger: CCTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCC...CAAAGCGAGGCAAAGAAGGGCAGGAGTGGGCTGTTCCCTGCTTAGTGCTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR CAA 90 bp | AGGCTGGCCTGCCCAACCCCCTCCAGGGCAGATGCTCAGGAATCCTaGTCACCAGCATGTTCTGGTGTTTGCATAGATTTAGAACGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RLACPTPSRADAQES*SPACSGVCIDLERS Trigger: GGAACGTTCTAAATCTATGCAAACACCAGAACATGCTGGTGACAAGGATTCCTGAGCATCTGCCCTGGAGGGGGTTGGGCAGGCCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAACAATGTCCTGGGGAGGAGAGTCAGAGACTTCGATGTTACCCAGGCCATAGGGGAGGGCCAGGCATaGTGGCACACAGCTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: LNNVLGRRVRDFDVTQAIGEGQA*WHTASI Trigger: GATTGAAGCTGTGTGCCACCATGCCTGGCCCTCCCC...TATGGCCTGGGTAACATCGAAGTCTCTGACTCTCCTCCCCAGGACATTGTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR CCA 90 bp | AATAGGCCTCTAGCCTTGGATGACTGCCCCACTGAATGCACCCTTTCAGAGTTGACCCCCATATCCAGCTaGGGTGGTCAGTGGCAACAC | + |
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Preference number: 2 (lower is better) Translates to: NRPLALDDCPTECTLSELTPISS*GGQWQH Trigger: GTGTTGCCACTGACCACCCCAGCTGGATATGGGGGT...CAACTCTGAAAGGGTGCATTCAGTGGGGCAGTCATCCAAGGCTAGAGGCCTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR TCA 90 bp | GATCCAAGGGACTCAACGACCTCTCCAGGCAGAGCCTGCAGCTGTCACAAAATGGGGTTTTTATGCCAGTaGGCCATGCCTCTCCATAGT | + |
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Preference number: 2 (lower is better) Translates to: DPRDSTTSPGRACSCHKMGFLCQ*AMPLHS Trigger: ACTATGGAGAGGCATGGCTCACTGGCATAAAAACCC...CATTTTGTGACAGCTGCAGGCTCTGCCTGGAGAGGTCGTTGAGTCCCTTGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCTGGATCCAAGGGACTCAACGACCTCTCCAGGCAGAGCCTGCAGCTGTCGGTAAGAAGCAGCCTTaGTTAAAGCTGGGTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: ASWIQGTQRPLQAEPAAVGKKQP*LKLGFY Trigger: ATAAAAACCCAGCTTTAAGCAAGGCTGCTTCTTACC...GACAGCTGCAGGCTCTGCCTGGAGAGGTCGTTGAGTCCCTTGGATCCAGCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR CAA 90 bp | CGCCCCCTTCCAGCCCATACTGTAGGTACAACTGTAAAAACCGTGTaGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGTATGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RPLPAHTVGTTVKTV*SRTTEGGSPVAVWQ Trigger: TTGCCATACAGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAACACGGTTTTTACAGTTGTACCTACAGTATGGGCTGGAAGGGGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCAAACCAAAGAGGTGGAACAAAGGTCTGGATGGGTGAACTCTGCTTTAGGATCCTGGAACTCATGCTaGAGACCAGGCTGGCCTCGA | + |
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Preference number: 2 (lower is better) Translates to: VQTKEVEQRSGWVNSALGSWNSC*RPGWPR Trigger: TCGAGGCCAGCCTGGTCTTCAGCATGAGTTCCAGGA...TCCTAAAGCAGAGTTCACCCATCCAGACCTTTGTTCCACCTCTTTGGTTTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACTGTAAAAACCGTGTTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTTCAGCGGTAGAGCACTaGCTTGGCTGTGAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: TTVKTVLSRTTEGGSPVASAVEH*LGCEGP Trigger: AGGGCCTTCACAGCCAAGTCAGTGCTCTACCGCTGA...AGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAACACGGTTTTTACAGTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR GCA 90 bp | CTATGGAACAAAAGCCAGTTGAGAGGAGAGGCTAAGGAGGCTGGCCTGCCCAACTATGCCAGTGAGCCATaGCTCTCCATAGTTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: LWNKSQLRGEAKEAGLPNYASEP*LSIVQT Trigger: TGTCTGAACTATGGAGAGGCATGGCTCACTGGCATA...GTTGGGCAGGCCAGCCTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCCATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTTCTAATTGGGGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGCTCTGGCAGCCTTCTTaGGCAGCAGAAGTAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LASNWGAQCSSQNKQSRKLWQPS*AAEVGV Trigger: CACCCCTACTTCTGCTGCCCAAGAAGGCTGCCAGAG...CTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCCCCAATTAGAAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGACCCTTCCTCTGGCAGCCTTCTTaGGCAGCAGAAGTAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PFARGLVFDIVLCKQGPFLWQPS*AAEVGV Trigger: CACCCCTACTTCTGCTGCCCAAGAAGGCTGCCAGAG...GAAGGGTCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR-3UTR CCA 90 bp | TTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGTATGGCAAGCAGAACGATGCAAACCAAAGAGGTaGAACAAAGGTCTGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LSRTTEGGSPVAVWQAERCKPKR*NKGLDG Trigger: CCCATCCAGACCTTTGTTCCACCTCTTTGGTTTGCA...TCGTTCTGCTTGCCATACAGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAACAATGTCCTGGGGAGGAGAGTCAGAGACTTCGATGTTACCCAGGCCATACCTCTTCATCACAGGTaGAAACCAAAGAGGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LNNVLGRRVRDFDVTQAIPLHHR*KPKRWN Trigger: GTTCCACCTCTTTGGTTTGCACCTGTGATGAAGAGG...TATGGCCTGGGTAACATCGAAGTCTCTGACTCTCCTCCCCAGGACATTGTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCAATAGCTACAGATATAAAAGCAGTTAAGGATAAGGGGAGGGCCAGGCATGGAGGCAGAAGCAGGTaGATCTCTGTAGGTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: CPIATDIKAVKDKGRARHGGRSR*ISVGLR Trigger: CCTCAGACCTACAGAGATCCACCTGCTTCTGCCTCC...ATGCCTGGCCCTCCCCTTATCCTTAACTGCTTTTATATCTGTAGCTATTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCACTGCCGAATCCTTACCCACTTAGCTTTCGAGAACCCTCATTCCAGGGAGGTGGAACAAAGGTCTaGATGGGTGAACTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSLPNPYPLSFREPSFQGGGTKV*MGELCF Trigger: AAAGCAGAGTTCACCCATCCAGACCTTTGTTCCACC...TCCCTGGAATGAGGGTTCTCGAAAGCTAAGTGGGTAAGGATTCGGCAGTGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGTATGGCAAGCAGAACGAGGCAAAGGACAGAGATaGCATGTGCTAAACAATGTC | + |
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Preference number: 2 (lower is better) Translates to: LSRTTEGGSPVAVWQAERGKGQR*HVLNNV Trigger: GACATTGTTTAGCACATGCCATCTCTGTCCTTTGCC...TCGTTCTGCTTGCCATACAGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR GCA 90 bp | TCATCACTGCCGAATCCTTACCCACTTAGCTTTCGAGAACCCTCATTCCAGGGACAAAGGGCTTCTCTGTaGAGTTTTGCTATCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SSLPNPYPLSFREPSFQGQRASL*SFAILE Trigger: TTCCAGGATAGCAAAACTGCACAGAGAAGCCCTTTG...TCCCTGGAATGAGGGTTCTCGAAAGCTAAGTGGGTAAGGATTCGGCAGTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR GCA 90 bp | ACCACACCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGATATGCCAGTGAGCCATaGCTCTCCATAGTTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: TTPFARGLVFDIVLCKQGYASEP*LSIVQT Trigger: TGTCTGAACTATGGAGAGGCATGGCTCACTGGCATA...TCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGGTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR-3UTR GCA 90 bp | TCATCACTGCCGAATCCTTACCCACTTAGCTTTCGAGAACCCTCATTCCAGGGATTCTCTGTGCAGTTTTaGTATCCTGGAACTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: SSLPNPYPLSFREPSFQGFSVQF*YPGTHA Trigger: AGCATGAGTTCCAGGATAGCAAAACTGCACAGAGAA...TCCCTGGAATGAGGGTTCTCGAAAGCTAAGTGGGTAAGGATTCGGCAGTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCATGTTCTGGTGTTTGCATAGATTTAGAACGTTCCAGAAAGGGTTTGTTCTGTGTTGTGCTCTCTaGCAGCCTTCTTGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TSMFWCLHRFRTFQKGFVLCCAL*QPSWAA Trigger: TGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAG...AACAAACCCTTTCTGGAACGTTCTAAATCTATGCAAACACCAGAACATGCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR CAA 90 bp | GCATGTTCTGGTGTTTGCATAGATTTAGAACGTTCCAGAAAGGGTTaGTTAAGACTGTGCTTGAGCTGTGTGCATCTCTACACGGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ACSGVCIDLERSRKG*LRLCLSCVHLYTGA Trigger: AGCACCCGTGTAGAGATGCACACAGCTCAAGCACAGTCTTAACAAACCCTTTCTGGAACGTTCTAAATCTATGCAAACACCAGAACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGACCCTTCAGTTCAGACACAATTTaGAGGAACATTACAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PFARGLVFDIVLCKQGPFSSDTI*RNITGA Trigger: GGCTCCTGTAATGTTCCTGCAAATTGTGTCTGAACT...GAAGGGTCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR CCA 72 bp | TCGAGAACCCTCATTCCAGGGACCCCCATATCCAGCTaGGGTGGTCAGTGGCAACACTCACAGTGCTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SRTLIPGTPISS*GGQWQHSQCWQ Trigger: TTGCCAGCACTGTGAGTGTTGCCACTGACCACCCCAGCTGGATATGGGGGTCCCTGGAATGAGGGTTCTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR TCA 72 bp | CAGGCTGGCCTCGAACTCACAGTGATCTGCCGGCCTTaGCTCAATGTGCTGGGATTAAAGGAATGTGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: QAGLELTVICRP*LNVLGLKECAP Trigger: GGGGGCACATTCCTTTAATCCCAGCACATTGAGTCAAGGCCGGCAGATCACTGTGAGTTCGAGGCCAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR GCA 72 bp | GCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTaGTCTCTGGCAGCCTTCTTGGGCAGCAGAAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: ASLLNQSSAPVL*SLAAFLGSRSR Trigger: CCTACTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR CCA 72 bp | TGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTaGATCCAAGGGACTCAACGACCTCTCCAGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CSSQNKQSRKAS*IQGTQRPLQAE Trigger: CTCTGCCTGGAGAGGTCGTTGAGTCCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR-3UTR CAA 90 bp | AGTTCAGACACAATTTGCAGGAACATTACAGGAGCCAGCAGGCACCAAGGGTCCTCTCTGGCAGCCTTCTaGGGCAGCAGAAGTAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: SSDTICRNITGASRHQGSSLAAF*GSRSRG Trigger: ACCCCTACTTCTGCTGCCCAAGAAGGCTGCCAGAGA...GGACCCTTGGTGCCTGCTGGCTCCTGTAATGTTCCTGCAAATTGTGTCTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR TCA 72 bp | CTCTGGCAGCCTTCTTGGGCAGCAGAAGTAGGGGTGTaGAGGAAGGTCCAAGATAAAGTACCTCGGTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LWQPSWAAEVGV*RKVQDKVPRSH Trigger: GTGAGACCGAGGTACTTTATCTTGGACCTTCCTTCACACCCCTACTTCTGCTGCCCAAGAAGGCTGCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| 3UTR TCA 72 bp | GCAGAACGAGGACTGTATGGCTCAGCGGTAGAGCACTaGCTTGGCTGTGAAGGCCCTGCTTTGGATAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: AERGLYGSAVEH*LGCEGPALDRL Trigger: TAACCTATCCAAAGCAGGGCCTTCACAGCCAAGTCAGTGCTCTACCGCTGAGCCATACAGTCCTCGTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR GCA 72 bp | TCCAAGCAGAGCACTAAGCAGGGAACAGCCCACTCCTaGCCTTCTTTGCCTCGCTTTGTGGACACTATGGAA | + |
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Preference number: 3 (lower is better) Translates to: SKQSTKQGTAHS*PSLPRFVDTME Trigger: TTCCATAGTGTCCACAAAGCGAGGCAAAGAAGGGCAGGAGTGGGCTGTTCCCTGCTTAGTGCTCTGCTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
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| 3UTR CCA 72 bp | AGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGTATaGCAAGCAGAACGAGGACTGTATGGCTCAGCGGTA | + |
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Preference number: 3 (lower is better) Translates to: SRTTEGGSPVAV*QAERGLYGSAV Trigger: TACCGCTGAGCCATACAGTCCTCGTTCTGCTTGCCATACAGCAACAGGTGAGCCTCCCTCTGTTGTCCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGTATGGCAAGCAGAACGATGTGAAGGCCCTGCTTaGGATAGGTTAGGGGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LSRTTEGGSPVAVWQAERCEGPA*DRLGEG Trigger: ACCCTCCCCTAACCTATCCAAAGCAGGGCCTTCACA...TCGTTCTGCTTGCCATACAGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| 3UTR GCA 72 bp | ACTGGCAGTCAATGTGGTAAAGGATGCCCCAAAGAGTaGTGGAGAGAGCCAGGCACGCCTTTAATTCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TGSQCGKGCPKE*WREPGTPLIPA Trigger: TGCTGGAATTAAAGGCGTGCCTGGCTCTCTCCAGCACTCTTTGGGGCATCCTTTACCACATTGACTGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR CCA 72 bp | GGCAGTCAATGTGGTAAAGGATGCCCCAAAGAGTGCTaGAGAGAGCCAGGCACGCCTTTAATTCCAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: GSQCGKGCPKEC*REPGTPLIPAL Trigger: AAGTGCTGGAATTAAAGGCGTGCCTGGCTCTCTCCAGCACTCTTTGGGGCATCCTTTACCACATTGACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR CCA 72 bp | GAACAGCCCACTCCTGCCCTTCTTTGCCTCGCTTTGTaGACACTATGGAACAAAAGCCAGTTGAGAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EQPTPALLCLAL*TLWNKSQLRGE Trigger: CTCTCCTCTCAACTGGCTTTTGTTCCATAGTGTCCACAAAGCGAGGCAAAGAAGGGCAGGAGTGGGCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR GCA 72 bp | CTTCCCTTCCTAACAAAGGGCTTCTCTGTGCAGTTTTaGTATCCTGGAACTCATGCTGAAGACCAGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LPFLTKGFSVQF*YPGTHAEDQAG Trigger: GCCAGCCTGGTCTTCAGCATGAGTTCCAGGATAGCAAAACTGCACAGAGAAGCCCTTTGTTAGGAAGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| 3UTR CCA 72 bp | ACTCCTGCCCTTCTTTGCCTCGCTTTGTGGACACTATaGAACAAAAGCCAGTTGAGAGGAGAGGCTAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TPALLCLALWTL*NKSQLRGEAKE Trigger: CTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCCATAGTGTCCACAAAGCGAGGCAAAGAAGGGCAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCAGGAATCCTTGTCACCAGCATGTTCTGGTGTTTGCATAGATTTAGAACGTCTCTGGCAGCCTTCTaGGGCAGCAGAAGTAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CSGILVTSMFWCLHRFRTSLAAF*GSRSRG Trigger: ACCCCTACTTCTGCTGCCCAAGAAGGCTGCCAGAGA...CGTTCTAAATCTATGCAAACACCAGAACATGCTGGTGACAAGGATTCCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR GCA 72 bp | ATCAAGGCAGTAAGCCCTTGTGGTAAGAAGCAGCCTTaGTTAAAGCTGGGTTTTTATGCCAGTGAGCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: IKAVSPCGKKQP*LKLGFYASEPC Trigger: GCATGGCTCACTGGCATAAAAACCCAGCTTTAAGCAAGGCTGCTTCTTACCACAAGGGCTTACTGCCTTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| 3UTR CCA 72 bp | AGTCTCCTTTCAGATCCAGCCAGACTGGCTTCTAATTaGGGAGCACAATGCTCCTCCCAGAATAAACAATCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLSDPARLASN*GAQCSSQNKQS Trigger: GGATTGTTTATTCTGGGAGGAGCATTGTGCTCCCCAATTAGAAGCCAGTCTGGCTGGATCTGAAAGGAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR GCA 72 bp | GATTTAGAACGTTCCAGAAAGGGTTTGTTAAGACTGTaGTTGAGCTGTGTGCATCTCTACACGGGTGCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: DLERSRKGLLRL*LSCVHLYTGAS Trigger: GCTAGCACCCGTGTAGAGATGCACACAGCTCAAGCACAGTCTTAACAAACCCTTTCTGGAACGTTCTAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR CCA 72 bp | GGCAGATGCTCAGGAATCCTTGTCACCAGCATGTTCTaGTGTTTGCATAGATTTAGAACGTTCCAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GRCSGILVTSMF*CLHRFRTFQKG Trigger: CCCTTTCTGGAACGTTCTAAATCTATGCAAACACCAGAACATGCTGGTGACAAGGATTCCTGAGCATCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR CCA 72 bp | GCCAGCCTGGTCTATGTAGCAAGTTTCAGGGTAGCCTaGGCTATAGAGAGATACCTTGTCTCAAACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: ASLVYVASFRVA*AIERYLVSNKT Trigger: TGTTTTGTTTGAGACAAGGTATCTCTCTATAGCCCAGGCTACCCTGAAACTTGCTACATAGACCAGGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| 3UTR GCA 72 bp | CCTTGCTTAAAGCTGGGTTTTTATGCCAGTGAGCCATaGCTCTCCATAGTTCAGACACAATTTGCAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PCLKLGFYASEP*LSIVQTQFAGT Trigger: TGTTCCTGCAAATTGTGTCTGAACTATGGAGAGGCATGGCTCACTGGCATAAAAACCCAGCTTTAAGCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| 3UTR GCA 72 bp | TGCTTGAGCTGTGTGCATCTCTACACGGGTGCTAGCTaGATCTGTAAACTCCTAAGTATCAACATGTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CLSCVHLYTGAS*ICKLLSINMCF Trigger: GAAACACATGTTGATACTTAGGAGTTTACAGATGCAGCTAGCACCCGTGTAGAGATGCACACAGCTCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR CCA 72 bp | CAGGTGCAAACCAAAGAGGTGGAACAAAGGTCTGGATaGGTGAACTCTGCTTTAGGAAATGAATGGTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: QVQTKEVEQRSG*VNSALGNEWSD Trigger: ATCTGACCATTCATTTCCTAAAGCAGAGTTCACCCATCCAGACCTTTGTTCCACCTCTTTGGTTTGCACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| 3UTR TCA 72 bp | GTAAGAAGCCATCTCTTGAGATGGGGGTCATTAACATaGCCTTATCCCTGGAGAAACCAACTCTTTATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VRSHLLRWGSLT*PYPWRNQLFIN Trigger: ATTTATAAAGAGTTGGTTTCTCCAGGGATAAGGTCATGTTAATGACCCCCATCTCAAGAGATGGCTTCTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR GCA 90 bp | TTTCGAGAACCCTCATTCCAGGGACCCCCATATCCAGCTGGGGTGGTCAGTGGCACGGCGTGCGAACGGTaGTCGCGGGCGCGGTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FREPSFQGPPYPAGVVSGTACER*SRARSH Trigger: GTGCGACCGCGCCCGCGAGCACCGTTCGCACGCCGT...GCCACTGACCACCCCAGCTGGATATGGGGGTCCCTGGAATGAGGGTTCTCGAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGCACGTCGCCTCGCCTTaGAGCTCTGCCGCTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVFSACVVLSGSLLGQQKHVASP*SSAARA Trigger: GGCCCTAGCGGCAGAGCTCCAAGGCGAGGCGACGTG...CTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGACACAATTTGCAGGAACATTACAGGAGCCAGCAGGCACCAAGGGTCCGCGGGCTCGCGGCACTaGGGACAGGGCAGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSDTICRNITGASRHQGSAGSRH*GQGSGQ Trigger: CTGCCCACTGCCCTGTCCTCAGTGCCGCGAGCCCGC...GGACCCTTGGTGCCTGCTGGCTCCTGTAATGTTCCTGCAAATTGTGTCTGAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR GCA 90 bp | GCCAGCTGGATCCAAGGGACTCAACGACCTCTCCAGGCAGAGCCTGCAGCTGTCGCGCATGTCCTCCACTaGATAGAAGGACACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASWIQGTQRPLQAEPAAVAHVLH*IEGHCS Trigger: GGAGCAGTGTCCTTCTATGCAGTGGAGGACATGCGC...GACAGCTGCAGGCTCTGCCTGGAGAGGTCGTTGAGTCCCTTGGATCCAGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAGACTGGCTTCTAATTGGGGAGCACAATGCTCCTCCCAGAATAAACAACGATTGGGTCGCAGCTaGCTGGGGCGCGCGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PARLASNWGAQCSSQNKQRLGRS*LGRAGS Trigger: CGAGCCCGCGCGCCCCAGCCAGCTGCGACCCAATCG...TTGTTTATTCTGGGAGGAGCATTGTGCTCCCCAATTAGAAGCCAGTCTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CCA 90 bp | CTAAACAATGTCCTGGGGAGGAGAGTCAGAGACTTCGATGTTACCCAGGCCATACGATTGGGTCGCAGCTaGCTGGGGCGCGCGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNNVLGRRVRDFDVTQAIRLGRS*LGRAGS Trigger: CGAGCCCGCGCGCCCCAGCCAGCTGCGACCCAATCG...TATGGCCTGGGTAACATCGAAGTCTCTGACTCTCCTCCCCAGGACATTGTTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR TCA 90 bp | ACAACTGTAAAAACCGTGTTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGCGGGCTCGCGGCACTaGGGACAGGGCAGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTVKTVLSRTTEGGSPVAAGSRH*GQGSGQ Trigger: CTGCCCACTGCCCTGTCCTCAGTGCCGCGAGCCCGC...AGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAACACGGTTTTTACAGTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGACCCTTCACGGCGTGCGAACGGTaGTCGCGGGCGCGGTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFARGLVFDIVLCKQGPFTACER*SRARSH Trigger: GTGCGACCGCGCCCGCGAGCACCGTTCGCACGCCGT...GAAGGGTCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CCA 90 bp | AATAGGCCTCTAGCCTTGGATGACTGCCCCACTGAATGCACCCTTTCAGAGTTGCACGTCGCCTCGCCTTaGAGCTCTGCCGCTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRPLALDDCPTECTLSELHVASP*SSAARA Trigger: GGCCCTAGCGGCAGAGCTCCAAGGCGAGGCGACGTG...CAACTCTGAAAGGGTGCATTCAGTGGGGCAGTCATCCAAGGCTAGAGGCCTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGTAGGGCTCGGCAGAAGCTGTaGCCGCATTCGACTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: SSAPVLCSLAAFLGSRSRARQKL*PHSTDT Trigger: GGTGTCAGTCGAATGCGGCCACAGCTTCTGCCGAGC...CCTACTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CCA 90 bp | GCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGCGCACACCACGCAAATaGCGCGGCCGTCGTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQCSSQNKQSRKASWIQGRTPRK*RGRRLG Trigger: GCCAAGACGACGGCCGCGCCATTTGCGTGGTGTGCG...CCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CCA 90 bp | GATCCAAGGGACTCAACGACCTCTCCAGGCAGAGCCTGCAGCTGTCACAAAATGAAGCCCAGCCGTCCTTaGAGCCCACTTCCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DPRDSTTSPGRACSCHKMKPSRP*SPLPPP Trigger: GGGAGGTGGAAGTGGGCTCCAAGGACGGCTGGGCTT...CATTTTGTGACAGCTGCAGGCTCTGCCTGGAGAGGTCGTTGAGTCCCTTGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCAAGCCCAGCCGTCCTTaGAGCCCACTTCCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLNQSSAPVLCSLAAFLGKPSRP*SPLPPP Trigger: GGGAGGTGGAAGTGGGCTCCAAGGACGGCTGGGCTT...GCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGCCTCTAGCCTTGGATGACTGCCCCACTGAATGCACCCTTTCAGAGTTGCGCACACCACGCAAATaGCGCGGCCGTCGTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRPLALDDCPTECTLSELRTPRK*RGRRLG Trigger: GCCAAGACGACGGCCGCGCCATTTGCGTGGTGTGCG...CAACTCTGAAAGGGTGCATTCAGTGGGGCAGTCATCCAAGGCTAGAGGCCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGAATCCAGCAACTCCTTaGCCTCCTGCACCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVFSACVVLSGSLLGQQKNPATP*PPAPPP Trigger: AGGAGGCGGTGCAGGAGGCCAAGGAGTTGCTGGATT...CTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CCA 90 bp | GTGCAATCGCGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGGTTGGCTTGGAGCTaGGCACGCTGCTGCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQSRSYPQGLFAQSVFSAWLAWS*ARCCTC Trigger: GCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAACCA...GGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCGCGATTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | CTATGGAACAAAAGCCAGTTGAGAGGAGAGGCTAAGGAGGCTGGCCTGCCCAACTGGTTGGCTTGGAGCTaGGCACGCTGCTGCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWNKSQLRGEAKEAGLPNWLAWS*ARCCTC Trigger: GCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAACCA...GTTGGGCAGGCCAGCCTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCCATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGGGGAACACTCGCTCCTaGAAGTTGACGCGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVFSACVVLSGSLLGQQKGNTRS*KLTRKV Trigger: CACCTTCCGCGTCAACTTCCAGGAGCGAGTGTTCCC...CTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | CTATGGAACAAAAGCCAGTTGAGAGGAGAGGCTAAGGAGGCTGGCCTGCCCAACGATCCAGGGACAAGATaGGACGGGGGTTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWNKSQLRGEAKEAGLPNDPGTR*DGGWLC Trigger: ACACAGCCAACCCCCGTCTCATCTTGTCCCTGGATC...GTTGGGCAGGCCAGCCTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCCATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGACTGGCTTCTAATTGGGGAGCACAATGCTCCTCCCAGAATAAACAAAGAAGCCGACCCTCCTaGTCCACCAGGAAGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PARLASNWGAQCSSQNKQRSRPS*STRKAR Trigger: GCGGGCCTTCCTGGTGGAGCAGGAGGGTCGGCTTCT...TTGTTTATTCTGGGAGGAGCATTGTGCTCCCCAATTAGAAGCCAGTCTGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGCACTAAGCAGGGAACAGCCCACTCCTGCCCTTCTTTGCCTCGCTTTGGGAGAAACCACAGGATaGCAGAACGCGGGTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRALSREQPTPALLCLALGETTG*QNAGVG Trigger: ACCAACACCCGCGTTCTGGCATCCTGTGGTTTCTCC...CAAAGCGAGGCAAAGAAGGGCAGGAGTGGGCTGTTCCCTGCTTAGTGCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR CAA 72 bp | CCAGGCTGGCCTCGAACTCACAGTGATCTGCCGGCCTaGACTCAATGTGCTGGGATTAAAGGAATGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGWPRTHSDLPA*TQCAGIKGMCP Trigger: GGGGCACATTCCTTTAATCCCAGCACATTGAGTCAAGGCCGGCAGATCACTGTGAGTTCGAGGCCAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTGAGTTTGGACAGCTaGGTGATCTCACCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFAQSVFSACVVLSGSLLSLDS*VISPSS Trigger: GCTGGAGGGTGAGATCACTCAGCTGTCCAAACTCAG...AAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | CGCTGTGCAATCGCGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGTCTAGGTCCGGCTTCTaGGCTGTCTCCTGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCAIAKLPTGPLCSISLQSRSGF*AVSWIW Trigger: CCAGATCCAGGAGACAGCTCAGAAGCCGGACCTAGA...CTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCGCGATTGCACAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | CGCTGTGCAATCGCGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGGATCCAGGGACAAGATaGGACGGGGGTTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCAIAKLPTGPLCSISLQDPGTR*DGGWLC Trigger: ACACAGCCAACCCCCGTCTCATCTTGTCCCTGGATC...CTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCGCGATTGCACAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGACTCAACGACCTCGCTCCTGGAAGTTaGCGCGGAAGGTGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRINNPGRPAGSKGLNDLAPGS*RGRCRG Trigger: ACCTCTACACCTTCCGCGTCAACTTCCAGGAGCGAG...GTCGTTGAGTCCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | TTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCGGAGAAACCACAGGATaGCAGAACGCGGGTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLNQSSAPVLCSLAAFLGGETTG*QNAGVG Trigger: ACCAACACCCGCGTTCTGGCATCCTGTGGTTTCTCC...GCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | GATCCAAGGGACTCAACGACCTCTCCAGGCAGAGCCTGCAGCTGTCACAAAATGGCGCATGTCCTCCACTaGATAGAAGGACACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPRDSTTSPGRACSCHKMAHVLH*IEGHCS Trigger: GGAGCAGTGTCCTTCTATGCAGTGGAGGACATGCGC...CATTTTGTGACAGCTGCAGGCTCTGCCTGGAGAGGTCGTTGAGTCCCTTGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGGGGGTTGGCTGTGTCTaGATCCAAAGTGAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVFSACVVLSGSLLGQQKGVGCV*IQSEFH Trigger: GTGGAACTCACTTTGGATCCAGACACAGCCAACCCC...CTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| 3UTR CAA 72 bp | AGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTaGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RASLLNQSSAPV*CSLAAFLGSRS Trigger: ACTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| 3UTR CAA 72 bp | TGCCTCGCTTTGTGGACACTATGGAACAAAAGCCAGTaGAGAGGAGAGGCTAAGGAGGCTGGCCTGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLALWTLWNKSQ*RGEAKEAGLPN Trigger: GTTGGGCAGGCCAGCCTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCCATAGTGTCCACAAAGCGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | GCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGCTGAGTTTGGACAGCTaGGTGATCTCACCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQCSSQNKQSRKASWIQGLSLDS*VISPSS Trigger: GCTGGAGGGTGAGATCACTCAGCTGTCCAAACTCAG...CCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAACTCGCTCCTGGAAGTTaGCGCGGAAGGTGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAQCSSQNKQSRKASWIQLAPGS*RGRCRG Trigger: ACCTCTACACCTTCCGCGTCAACTTCCAGGAGCGAG...TTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGACTCAACGACCTCATTGTTGAGTTGCATTaGCCAGACGCCCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRINNPGRPAGSKGLNDLIVELH*PDALLG Trigger: CCCGAGGAGGGCGTCTGGGCAATGCAACTCAACAAT...GAGGTCGTTGAGTCCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | CTATGGAACAAAAGCCAGTTGAGAGGAGAGGCTAAGGAGGCTGGCCTGCCCAACTGCATAGAAGGACACTaGTCCCACCTCAAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWNKSQLRGEAKEAGLPNCIEGH*SHLKVQ Trigger: CTGGACCTTGAGGTGGGAGCAGTGTCCTTCTATGCA...GTTGGGCAGGCCAGCCTCCTTAGCCTCTCCTCTCAACTGGCTTTTGTTCCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTACCTCGGTCTCACCGAGATACACCGCTGCCCTGTCCCCTCCTAGTAATCTCACCCTCCAGCTaGGCCAGGTTCTCATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKVPRSHRDTPLPCPLLVISPSS*ARFSFC Trigger: ACAGAATGAGAACCTGGCCCAGCTGGAGGGTGAGAT...TACTAGGAGGGGACAGGGCAGCGGTGTATCTCGGTGAGACCGAGGTACTTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGCTGTCTCCTGGATCTaGCCGCTGAGTTTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLNQSSAPVLCSLAAFLAVSWI*PLSLDS Trigger: GCTGTCCAAACTCAGCGGCCAGATCCAGGAGACAGC...CAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | GCAATCGCGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGGTGCTTTTGAACTCCTaGAGGAAGTCTAGGTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AIAKLPTGPLCSISLQRLVLLNS*RKSRSG Trigger: GCCGGACCTAGACTTCCTCCAGGAGTTCAAAAGCAC...CAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCGCGATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | CGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCCAGAACGCGGGTGTTaGTATCAAAGCGGCGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSYPQGLFAQSVFSACVVPERGC*YQSGED Trigger: ATCCTCGCCGCTTTGATACCAACACCCGCGTTCTGG...CACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| 3UTR CAA 72 bp | TCGCTGTGCAATCGCGAAGTTACCCACAGGGCCTCTTaGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCNREVTHRAS*LNQSSAPVLCS Trigger: AGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCGCGATTGCACAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGAGCCAGGCACGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGTGATTCTTCATCTCAGATaGGACTGTGGTTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WREPGTPLIPALGRQRQVILHLR*DCGWLG Trigger: TCCAAGCCAACCACAGTCTCATCTGAGATGAAGAAT...CACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCGTGCCTGGCTCTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | GTGCAATCGCGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCGCTTTAGAAGCTCCTTaGTCTCCCTCTCCTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQSRSYPQGLFAQSVFSAALEAP*SPSPLL Trigger: CAACAGAGGAGAGGGAGAGCAAGGAGCTTCTAAAGC...GGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCGCGATTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGTAGGGTCACCGCCCAGTATTaGCCATTGTTGAGTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSAPVLCSLAAFLGSRSRVTAQY*PLLSCI Trigger: AATGCAACTCAACAATGGGCAATACTGGGCGGTGAC...CCTACTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGCCTCTAGCCTTGGATGACTGCCCCACTGAATGCACCCTTTCAGAGTTGTCAAGGCCCTCAGCCTaGAATCCAGCAACTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRPLALDDCPTECTLSELSRPSA*NPATPW Trigger: CCAAGGAGTTGCTGGATTCCAGGCTGAGGGCCTTGA...CAACTCTGAAAGGGTGCATTCAGTGGGGCAGTCATCCAAGGCTAGAGGCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR TCA 90 bp | CGCTGTGCAATCGCGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGAGTATTGCCCATTGTTaGGTTGCATTGCCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RCAIAKLPTGPLCSISLQSIAHC*VALPRR Trigger: GCGTCTGGGCAATGCAACTCAACAATGGGCAATACT...CTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCGCGATTGCACAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | GATAAAGTACCTCGGTCTCACCGAGATACACCGCTGCCCTGTCCCCTCCTAGTATTCTCTGCTGCCATCTaGTTTAGAAGCTCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKVPRSHRDTPLPCPLLVFSAAI*FRSSLL Trigger: GAGCAAGGAGCTTCTAAAGCAGATGGCAGCAGAGAA...TACTAGGAGGGGACAGGGCAGCGGTGTATCTCGGTGAGACCGAGGTACTTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CCA 90 bp | TCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGAAAACTCTAGGCAGATaGAGCACGTCGCCTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLNQSSAPVLCSLAAFLKTLGR*STSPRL Trigger: AAGGCGAGGCGACGTGCTCCATCTGCCTAGAGTTTT...CAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CCA 90 bp | AGACTGGCTTCTAATTGGGGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGGCTGTCTCCTGGATCTaGCCGCTGAGTTTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLASNWGAQCSSQNKQSRAVSWI*PLSLDS Trigger: GCTGTCCAAACTCAGCGGCCAGATCCAGGAGACAGC...CCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCCCCAATTAGAAGCCAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGACTCAACGACCTGTGCTTTTGAACTCCTaGAGGAAGTCTAGGTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQNKQSRKASWIQGTQRPVLLNS*RKSRSG Trigger: GCCGGACCTAGACTTCCTCCAGGAGTTCAAAAGCAC...AGGTCGTTGAGTCCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCTTCTCCAGCTCTCCCTaGAGATCCTCTTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GEHNAPPRINNPGRPAGSFSSSP*RSSLNF Trigger: GAAGTTCAAAGAGGATCTCCAGGGAGAGCTGGAGAA...GGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAGACTGGCTTCTAATTGGGGAGCACAATGCTCCTCCCAGAATAAACAACCAGAACGCGGGTGTTaGTATCAAAGCGGCGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PARLASNWGAQCSSQNKQPERGC*YQSGED Trigger: ATCCTCGCCGCTTTGATACCAACACCCGCGTTCTGG...TTGTTTATTCTGGGAGGAGCATTGTGCTCCCCAATTAGAAGCCAGTCTGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGACTCAACGACCTCTGCTCAGTGTGCTTTTaGACTCCTGGAGGAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PRINNPGRPAGSKGLNDLCSVCF*TPGGSL Trigger: TAGACTTCCTCCAGGAGTTCAAAAGCACACTGAGCA...GAGGTCGTTGAGTCCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | CGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGGTCACCGCCCAGTATTaGCCATTGTTGAGTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RSYPQGLFAQSVFSACVVVTAQY*PLLSCI Trigger: AATGCAACTCAACAATGGGCAATACTGGGCGGTGAC...CACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGTATGGCAAGCAGAACGATCACTAGAAGCTCCTTaGTCTCCCTCTCCTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRTTEGGSPVAVWQAERSLEAP*SPSPLL Trigger: CAACAGAGGAGAGGGAGAGCAAGGAGCTTCTAGTGA...TCGTTCTGCTTGCCATACAGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGACCCTTCTCAAGGCCCTCAGCCTaGAATCCAGCAACTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFARGLVFDIVLCKQGPFSRPSA*NPATPW Trigger: CCAAGGAGTTGCTGGATTCCAGGCTGAGGGCCTTGA...GAAGGGTCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR TCA 90 bp | GGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAATGCTCAGTGTGCTTTTaGACTCCTGGAGGAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GAQCSSQNKQSRKASWIQCSVCF*TPGGSL Trigger: TAGACTTCCTCCAGGAGTTCAAAAGCACACTGAGCA...TTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGACTCAACGACCTCCCTGGAGATCCTCTTTaGACTTCTTCAGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRINNPGRPAGSKGLNDLPGDPL*TSSAIL Trigger: AAGGATTGCTGAAGAAGTTCAAAGAGGATCTCCAGG...GAGGTCGTTGAGTCCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | ACCACACCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGAATTGTTGAGTTGCATTaGCCAGACGCCCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTPFARGLVFDIVLCKQGIVELH*PDALLG Trigger: CCCGAGGAGGGCGTCTGGGCAATGCAACTCAACAAT...TCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | ACAACTGTAAAAACCGTGTTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTCTCTCTCTCTCTCTCTaGCTTGGTCATCCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: TTVKTVLSRTTEGGSPVALSLSL*LGHPQP Trigger: GGGTTGTGGATGACCAAGGCAGAGAGAGAGAGAGAG...AGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAACACGGTTTTTACAGTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| CDS-3UTR CCA 90 bp | GTGCAAACCAAAGAGGTGGAACAAAGGTCTGGATGGGTGAACTCTGCTTTAGGAAAAACTCTAGGCAGATaGAGCACGTCGCCTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQTKEVEQRSGWVNSALGKTLGR*STSPRL Trigger: AAGGCGAGGCGACGTGCTCCATCTGCCTAGAGTTTT...TCCTAAAGCAGAGTTCACCCATCCAGACCTTTGTTCCACCTCTTTGGTTTGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGACTCAACGACCTTTCTCCAGCTCTCCCTaGAGATCCTCTTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQNKQSRKASWIQGTQRPFSSSP*RSSLNF Trigger: GAAGTTCAAAGAGGATCTCCAGGGAGAGCTGGAGAA...AGGTCGTTGAGTCCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | AGACTGGCTTCTAATTGGGGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGGGGGTTGGCTGTGTCTaGATCCAAAGTGAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLASNWGAQCSSQNKQSRGVGCV*IQSEFH Trigger: GTGGAACTCACTTTGGATCCAGACACAGCCAACCCC...CCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCCCCAATTAGAAGCCAGTCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| 3UTR CAA 72 bp | CCAGCCCATACTGTAGGTACAACTGTAAAAACCGTGTaGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAHTVGTTVKTV*SRTTEGGSPVA Trigger: AGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAACACGGTTTTTACAGTTGTACCTACAGTATGGGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGATTCTTCATCTCAGATaGGACTGTGGTTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLNQSSAPVLCSLAAFLILHLR*DCGWLG Trigger: TCCAAGCCAACCACAGTCTCATCTGAGATGAAGAAT...CAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | ACCACACCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGATGCATAGAAGGACACTaGTCCCACCTCAAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTPFARGLVFDIVLCKQGCIEGH*SHLKVQ Trigger: CTGGACCTTGAGGTGGGAGCAGTGTCCTTCTATGCA...TCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGGTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGTATGGCAAGCAGAACGATCATCCACAACCCTATaGTTCTCACACTTGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRTTEGGSPVAVWQAERSSTTL*FSHLDS Trigger: TGAGTCCAAGTGTGAGAAGCATAGGGTTGTGGATGA...TCGTTCTGCTTGCCATACAGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGATGGGTGAACTCTGCTTTAGGAAATGAATGGTCAGATGTAAAAGTCTGGAATCCAGCAACTCCTTaGCCTCCTGCACCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGWVNSALGNEWSDVKVWNPATP*PPAPPP Trigger: AGGAGGCGGTGCAGGAGGCCAAGGAGTTGCTGGATT...CCAGACTTTTACATCTGACCATTCATTTCCTAAAGCAGAGTTCACCCATCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR TCA 90 bp | GCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGTTAAGACGAAACTCTTaGGGGAAACATTCCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: AQCSSQNKQSRKASWIQGLRRNS*GKHSTL Trigger: AAGTGTGGAATGTTTCCCTCAAGAGTTTCGTCTTAA...CCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCACTCCTGCCCTTCTTTGCCTCGCTTTGTGGACACTATGGAACAAAAGCCTTAAGACGAAACTCTTaGGGGAAACATTCCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFFASLCGHYGTKALRRNS*GKHSTL Trigger: AAGTGTGGAATGTTTCCCTCAAGAGTTTCGTCTTAA...GGCTTTTGTTCCATAGTGTCCACAAAGCGAGGCAAAGAAGGGCAGGAGTGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | ACCACACCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGAAGTATTGCCCATTGTTaGGTTGCATTGCCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: TTPFARGLVFDIVLCKQGSIAHC*VALPRR Trigger: GCGTCTGGGCAATGCAACTCAACAATGGGCAATACT...TCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGGTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGACCCTTCCCTGGAGATCCTCTTTaGACTTCTTCAGCAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFARGLVFDIVLCKQGPFPGDPL*TSSAIL Trigger: AAGGATTGCTGAAGAAGTTCAAAGAGGATCTCCAGG...GAAGGGTCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCAATAGCTACAGATATAAAAGCAGTTAAGGATAAGGGGAGGGCCAGGCATTCTCTCTCTCTGCCTTaGTCATCCACAACCCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: CPIATDIKAVKDKGRARHSLSLP*SSTTLC Trigger: GCATAGGGTTGTGGATGACCAAGGCAGAGAGAGAGA...ATGCCTGGCCCTCCCCTTATCCTTAACTGCTTTTATATCTGTAGCTATTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCATGTTCTGGTGTTTGCATAGATTTAGAACGTTCCAGAAAGGGTTTGTTATCTCACCCTCCAGCTaGGCCAGGTTCTCATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSMFWCLHRFRTFQKGFVISPSS*ARFSFC Trigger: ACAGAATGAGAACCTGGCCCAGCTGGAGGGTGAGAT...AACAAACCCTTTCTGGAACGTTCTAAATCTATGCAAACACCAGAACATGCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| 3UTR CAA 72 bp | TCAAATTACAAGATGCTGCTACAGGTCCTAACTGGTTaGTTACGAATGACTGTGCACCCTAAAGATGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: SNYKMLLQVLTG*LRMTVHPKDEL Trigger: CAATTCATCTTTAGGGTGCACAGTCATTCGTAACAAACCAGTTAGGACCTGTAGCAGCATCTTGTAATTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS CCA 90 bp | GGCTCCCGGAAAAACTCTAGGCAGATGGAGCACGTCGCCTCGCCTTaGAGCTCTGCCGCTAGGGCCAGCGCCTCGGCTCCTGCGTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRKNSRQMEHVASP*SSAARASASAPAFG Trigger: GCCGAACGCAGGAGCCGAGGCGCTGGCCCTAGCGGCAGAGCTCCAAGGCGAGGCGACGTGCTCCATCTGCCTAGAGTTTTTCCGGGAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000155478.2 |
||
| CDS GCA 90 bp | ACTTCCCGGGACAGCACCTCCAGTCGGCTTAGAAGCCGACCCTCCTaGTCCACCAGGAAGGCCCGCAGCGCTTGGAACTCCGCCCCTACC | + |
|
Preference number: 5 (lower is better) Translates to: TSRDSTSSRLRSRPS*STRKARSAWNSAPT Trigger: GGTAGGGGCGGAGTTCCAAGCGCTGCGGGCCTTCCTGGTGGAGCAGGAGGGTCGGCTTCTAAGCCGACTGGAGGTGCTGTCCCGGGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 ENSMUST00000129674.2 |
||
| CDS TCA 90 bp | CCTCAAGGTCCAGCGCCACCCTCACCCGCGACAAGTGCCCACAGTTaGGCTGTGTCCTCTCGGGGCTGGTCACCGCCCAGTATTGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQGPAPPSPATSAHS*AVSSRGWSPPSIAH Trigger: ATGGGCAATACTGGGCGGTGACCAGCCCCGAGAGGACACAGCTCAACTGTGGGCACTTGTCGCGGGTGAGGGTGGCGCTGGACCTTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS GCA 90 bp | CCACAGTTGAGCTGTGTCCTCTCGGGGCTGGTCACCGCCCAGTATTaGCCATTGTTGAGTTGCATTGCCCAGACGCCCTCCTCGGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PQLSCVLSGLVTAQY*PLLSCIAQTPSSGV Trigger: TACCCCCGAGGAGGGCGTCTGGGCAATGCAACTCAACAATGGGCAATACTGGGCGGTGACCAGCCCCGAGAGGACACAGCTCAACTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS GCA 90 bp | GAAGGTGTAGAGGTGGCGCATGTCCTCCACTGCATAGAAGGACACTaGTCCCACCTCAAGGTCCAGCGCCACCCTCACCCGCGACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGVEVAHVLHCIEGH*SHLKVQRHPHPRQV Trigger: CACTTGTCGCGGGTGAGGGTGGCGCTGGACCTTGAGGTGGGAGCAGTGTCCTTCTATGCAGTGGAGGACATGCGCCACCTCTACACCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGAGTGCTGGAGAGAGCCAGGCACGCCTTTAATTCCAGCACTTGGGAGGCAAAAGGCGTGAGGCCCTaGCGACGCACGCTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QRVLERARHAFNSSTWEAKGVRP*RRTLSR Trigger: CCGGGAGAGCGTGCGTCGCAAGGGCCTCACGCCTTT...TGCCTCCCAAGTGCTGGAATTAAAGGCGTGCCTGGCTCTCTCCAGCACTCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS GCA 90 bp | CTGGAAGTTGACGCGGAAGGTGTAGAGGTGGCGCATGTCCTCCACTaGATAGAAGGACACTGCTCCCACCTCAAGGTCCAGCGCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LEVDAEGVEVAHVLH*IEGHCSHLKVQRHP Trigger: AGGGTGGCGCTGGACCTTGAGGTGGGAGCAGTGTCCTTCTATGCAGTGGAGGACATGCGCCACCTCTACACCTTCCGCGTCAACTTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | CGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGAAAGGCGTGAGGCCCTaGCGACGCACGCTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSYPQGLFAQSVFSACVVKGVRP*RRTLSR Trigger: CCGGGAGAGCGTGCGTCGCAAGGGCCTCACGCCTTT...CACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS CCA 90 bp | CCACAGGATGCCAGAACGCGGGTGTTGGTATCAAAGCGGCGAGGATaGTTAGGCAAGTCCTGGGCGCGCTGTCCTAGACGTACGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PQDARTRVLVSKRRG*LGKSWARCPRRTLF Trigger: AAAGAGCGTACGTCTAGGACAGCGCGCCCAGGACTTGCCTAACCATCCTCGCCGCTTTGATACCAACACCCGCGTTCTGGCATCCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | GGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTGAATCCAGCAACTCCTaGGCCTCCTGCACCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLFAQSVFSACVVLSGSLESSNS*ASCTAS Trigger: GGAGGCGGTGCAGGAGGCCAAGGAGTTGCTGGATTC...AAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CAA 90 bp | CGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGGAAGGCCCGCAGCGCTaGGAACTCCGCCCCTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSYPQGLFAQSVFSACVVEGPQR*ELRPYL Trigger: AAGGTAGGGGCGGAGTTCCAAGCGCTGCGGGCCTTC...CACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | GCAATCGCGAAGTTACCCACAGGGCCTCTTTGCTCAATCAGTCTTCAGCGCCTGAAAGCCCAGCCGTCCTaGGAGCCCACTTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIAKLPTGPLCSISLQRLKAQPS*EPTSTS Trigger: GGAGGTGGAAGTGGGCTCCAAGGACGGCTGGGCTTT...CAGGCGCTGAAGACTGATTGAGCAAAGAGGCCCTGTGGGTAACTTCGCGATTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | CTAAGCAGGGAACAGCCCACTCCTGCCCTTCTTTGCCTCGCTTTGTGGACACTAAAAGCCCAGCCGTCCTaGGAGCCCACTTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSREQPTPALLCLALWTLKAQPS*EPTSTS Trigger: GGAGGTGGAAGTGGGCTCCAAGGACGGCTGGGCTTT...TAGTGTCCACAAAGCGAGGCAAAGAAGGGCAGGAGTGGGCTGTTCCCTGCTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS CCA 90 bp | ACGCGGGTGTTGGTATCAAAGCGGCGAGGATGGTTAGGCAAGTCCTaGGCGCGCTGTCCTAGACGTACGCTCTTTAGATCCAGGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TRVLVSKRRGWLGKS*ARCPRRTLFRSRDK Trigger: CTTGTCCCTGGATCTAAAGAGCGTACGTCTAGGACAGCGCGCCCAGGACTTGCCTAACCATCCTCGCCGCTTTGATACCAACACCCGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | TTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCGGCGCGGCCGTCGTCTaGGCAGTAGAGCTTAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLNQSSAPVLCSLAAFLGGAAVV*AVELKL Trigger: CAACTTAAGCTCTACTGCCAAGACGACGGCCGCGCC...GCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS TCA 90 bp | TTGGCTTGGAGCTGGGCACGCTGCTGCACTTGCTCAGTGTGCTTTTaGACTCCTGGAGGAAGTCTAGGTCCGGCTTCTGAGCTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LAWSWARCCTCSVCF*TPGGSLGPASELSP Trigger: AGGAGACAGCTCAGAAGCCGGACCTAGACTTCCTCCAGGAGTTCAAAAGCACACTGAGCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGACCCTTCGAAGGCCCGCAGCGCTaGGAACTCCGCCCCTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFARGLVFDIVLCKQGPFEGPQR*ELRPYL Trigger: AAGGTAGGGGCGGAGTTCCAAGCGCTGCGGGCCTTC...GAAGGGTCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGACACAATTTGCAGGAACATTACAGGAGCCAGCAGGCACCAAGGGTCCCAGATGAGACTGTGGTaGGCTTGGAGCTGGGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: SSDTICRNITGASRHQGSQMRLW*AWSWAR Trigger: GCGTGCCCAGCTCCAAGCCAACCACAGTCTCATCTG...GGACCCTTGGTGCCTGCTGGCTCCTGTAATGTTCCTGCAAATTGTGTCTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | TCATCACTGCCGAATCCTTACCCACTTAGCTTTCGAGAACCCTCATTCCAGGGAGGCGCGGCCGTCGTCTaGGCAGTAGAGCTTAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLPNPYPLSFREPSFQGGAAVV*AVELKL Trigger: CAACTTAAGCTCTACTGCCAAGACGACGGCCGCGCC...TCCCTGGAATGAGGGTTCTCGAAAGCTAAGTGGGTAAGGATTCGGCAGTGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CAA 90 bp | ACAACTGTAAAAACCGTGTTGAGTAGGACAACAGAGGGAGGCTCACCTGTTGCTGAATCCAGCAACTCCTaGGCCTCCTGCACCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTVKTVLSRTTEGGSPVAESSNS*ASCTAS Trigger: GGAGGCGGTGCAGGAGGCCAAGGAGTTGCTGGATTC...AGCAACAGGTGAGCCTCCCTCTGTTGTCCTACTCAACACGGTTTTTACAGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGATGAGACGGGGGTaGGCTGTGTCTGGATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GEHNAPPRINNPGRPAGSKMRRG*AVSGSK Trigger: TTTGGATCCAGACACAGCCAACCCCCGTCTCATCTT...GGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | TTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCTGCTTTAGAAGCTCCTaGCTCTCCCTCTCCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLNQSSAPVLCSLAAFLGCFRSS*LSLSSV Trigger: AACAGAGGAGAGGGAGAGCAAGGAGCTTCTAAAGCA...GCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CAA 90 bp | GGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGCACGCTGCTGCACTaGCTCAGTGTGCTTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GAQCSSQNKQSRKASWIQGTLLH*LSVLLN Trigger: GTTCAAAAGCACACTGAGCAAGTGCAGCAGCGTGCC...TTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTCTAATTGGGGAGCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGCAGATGAGACTGTGGTaGGCTTGGAGCTGGGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LASNWGAQCSSQNKQSRKQMRLW*AWSWAR Trigger: GCGTGCCCAGCTCCAAGCCAACCACAGTCTCATCTG...CTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGCTCCCCAATTAGAAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGACTCAACGACAAGATGAGACGGGGGTaGGCTGTGTCTGGATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPRINNPGRPAGSKGLNDKMRRG*AVSGSK Trigger: TTTGGATCCAGACACAGCCAACCCCCGTCTCATCTT...GTCGTTGAGTCCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGACACAATTTGCAGGAACATTACAGGAGCCAGCAGGCACCAAGGGTCCTCTCCCTCTCCTCTGTaGACCGGAACGCTTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSDTICRNITGASRHQGSSPSPL*TGTLHS Trigger: ACTATGAAGCGTTCCGGTCAACAGAGGAGAGGGAGA...GGACCCTTGGTGCCTGCTGGCTCCTGTAATGTTCCTGCAAATTGTGTCTGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
||
| CDS-3UTR CAA 90 bp | GCCTCTTTGCTCAATCAGTCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCCCCTGGAGATCCTCTTaGAACTTCTTCAGCAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASLLNQSSAPVLCSLAAFPWRSS*NFFSNP Trigger: AGGATTGCTGAAGAAGTTCAAAGAGGATCTCCAGGG...GAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGACTGATTGAGCAAAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCGATCTCCTCTCCCACTTCCAAGCAGAGCACTAAGCAGGGAACAGCCCACTTGCTCAGTGTGCTTTaGAACTCCTGGAGGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISISSPTSKQSTKQGTAHLLSVL*NSWRKS Trigger: AGACTTCCTCCAGGAGTTCAAAAGCACACTGAGCAA...GTGGGCTGTTCCCTGCTTAGTGCTCTGCTTGGAAGTGGGAGAGGAGATCGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTTGCAAGGGGACTAGTCTTTGACATTGTTCTGTGTAAACAGGGACCCTTCGGCACGCTGCTGCACTaGCTCAGTGTGCTTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PFARGLVFDIVLCKQGPFGTLLH*LSVLLN Trigger: GTTCAAAAGCACACTGAGCAAGTGCAGCAGCGTGCC...GAAGGGTCCCTGTTTACACAGAACAATGTCAAAGACTAGTCCCCTTGCAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS-3UTR CAA 90 bp | GCACAATGCTCCTCCCAGAATAAACAATCCAGGAAGGCCAGCTGGATCCAAGGGCCCTGGAGATCCTCTTaGAACTTCTTCAGCAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: AQCSSQNKQSRKASWIQGPWRSS*NFFSNP Trigger: AGGATTGCTGAAGAAGTTCAAAGAGGATCTCCAGGG...CCCTTGGATCCAGCTGGCCTTCCTGGATTGTTTATTCTGGGAGGAGCATTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS-3UTR CAA 90 bp | CTAAACAATGTCCTGGGGAGGAGAGTCAGAGACTTCGATGTTACCCAGGCCATACTCACTAGAAGCTCCTaGCTCTCCCTCTCCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LNNVLGRRVRDFDVTQAILTRSS*LSLSSV Trigger: AACAGAGGAGAGGGAGAGCAAGGAGCTTCTAGTGAG...TATGGCCTGGGTAACATCGAAGTCTCTGACTCTCCTCCCCAGGACATTGTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGACACAATTTGCAGGAACATTACAGGAGCCAGCAGGCACCAAGGGTCCTTGCTCAGTGTGCTTTaGAACTCCTGGAGGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSDTICRNITGASRHQGSLLSVL*NSWRKS Trigger: AGACTTCCTCCAGGAGTTCAAAAGCACACTGAGCAA...GGACCCTTGGTGCCTGCTGGCTCCTGTAATGTTCCTGCAAATTGTGTCTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGCGCCTGTGTTGTGCTCTCTGGCAGCCTTCTTGGGCAGCAGAAGTAGGTTTAAGACGAAACTCTaGAGGGAAACATTCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: SSAPVLCSLAAFLGSRSRFKTKL*RETFHT Trigger: AGTGTGGAATGTTTCCCTCAAGAGTTTCGTCTTAAA...CCTACTTCTGCTGCCCAAGAAGGCTGCCAGAGAGCACAACACAGGCGCTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS-3UTR CAA 90 bp | AATAGGCCTCTAGCCTTGGATGACTGCCCCACTGAATGCACCCTTTCAGAGTTGCTATGCTTCTCACACTaGGACTCACTAGAAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NRPLALDDCPTECTLSELLCFSH*DSLEAP Trigger: AGGAGCTTCTAGTGAGTCCAAGTGTGAGAAGCATAG...CAACTCTGAAAGGGTGCATTCAGTGGGGCAGTCATCCAAGGCTAGAGGCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS TCA 90 bp | GAAACTCTTGAGGGAAACATTCCACACTTTATTCTTCATCTCAGATaGGACTGTGGTTGGCTTGGAGCTGGGCACGCTGCTGCACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ETLEGNIPHFILHLR*DCGWLGAGHAAALA Trigger: AGCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAACCACAGTCTCATCTGAGATGAAGAATAAAGTGTGGAATGTTTCCCTCAAGAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTTaGTCATCCACAACCCTATGCTTCTCACACTTGGACTCACTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLSLSLSLSLP*SSTTLCFSHLDSLE Trigger: TTCTAGTGAGTCCAAGTGTGAGAAGCATAGGGTTGTGGATGACCAAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CAA 90 bp | GGATGGGTGAACTCTGCTTTAGGAAATGAATGGTCAGATGTAAAAGTCTGGGATCTCTCTCTCTCTGCCTaGGTCATCCACAACCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: GWVNSALGNEWSDVKVWDLSLSA*VIHNPM Trigger: CATAGGGTTGTGGATGACCAAGGCAGAGAGAGAGAG...ATCCCAGACTTTTACATCTGACCATTCATTTCCTAAAGCAGAGTTCACCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCAGGAATCCTTGTCACCAGCATGTTCTGGTGTTTGCATAGATTTAGAACGTTTAAGACGAAACTCTaGAGGGAAACATTCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: CSGILVTSMFWCLHRFRTFKTKL*RETFHT Trigger: AGTGTGGAATGTTTCCCTCAAGAGTTTCGTCTTAAA...CGTTCTAAATCTATGCAAACACCAGAACATGCTGGTGACAAGGATTCCTGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109213.9 |
||
| CDS CCA 72 bp | GCCGAAGGAGCGAGGCCACCGCGGCCAGCTGTCGATTaGGTCGCAGCTGGCTGGGGCGCGCGGGCTCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AEGARPPRPAVD*VAAGWGARARG Trigger: GCCGCGAGCCCGCGCGCCCCAGCCAGCTGCGACCCAATCGACAGCTGGCCGCGGTGGCCTCGCTCCTTCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000155478.2 |
||
| CDS CAA 72 bp | CGCCGAAGGAGCGAGGCCACCGCGGCCAGCTGTCGATaGGGTCGCAGCTGGCTGGGGCGCGCGGGCTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRSEATAASCR*GRSWLGRAGSR Trigger: CCGCGAGCCCGCGCGCCCCAGCCAGCTGCGACCCAATCGACAGCTGGCCGCGGTGGCCTCGCTCCTTCGGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000155478.2 |
||
| CDS CAA 90 bp | GGCGCGGCCGTCGTCTTGGCAGTAGAGCTTAAGTTGCTCTCCGTGTaGGGAGCACCGCGCAGCCGCCGCCCGGGCAGGCACCGCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GAAVVLAVELKLLSV*GAPRSRRPGRHRWS Trigger: ACTCCAGCGGTGCCTGCCCGGGCGGCGGCTGCGCGGTGCTCCCAACACGGAGAGCAACTTAAGCTCTACTGCCAAGACGACGGCCGCGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000155478.2 |
||
| CDS CAA 90 bp | TGCATTGCCCAGACGCCCTCCTCGGGGGTAAAAGGCGTGAGGCCCTaGCGACGCACGCTCTCCCGGGCCACACCGAAAGCCCAGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CIAQTPSSGVKGVRP*RRTLSRATPKAQPS Trigger: GGACGGCTGGGCTTTCGGTGTGGCCCGGGAGAGCGTGCGTCGCAAGGGCCTCACGCCTTTTACCCCCGAGGAGGGCGTCTGGGCAATGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS CAA 72 bp | CAGACGCCCTCCTCGGGGGTAAAAGGCGTGAGGCCCTaGCGACGCACGCTCTCCCGGGCCACACCGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QTPSSGVKGVRP*RRTLSRATPKA Trigger: GGCTTTCGGTGTGGCCCGGGAGAGCGTGCGTCGCAAGGGCCTCACGCCTTTTACCCCCGAGGAGGGCGTCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS CAA 90 bp | CACCACGCAAATGGCGCGGCCGTCGTCTTGGCAGTAGAGCTTAAGTaGCTCTCCGTGTTGGGAGCACCGCGCAGCCGCCGCCCGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HHANGAAVVLAVELK*LSVLGAPRSRRPGR Trigger: CCTGCCCGGGCGGCGGCTGCGCGGTGCTCCCAACACGGAGAGCAACTTAAGCTCTACTGCCAAGACGACGGCCGCGCCATTTGCGTGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000155478.2 |
||
| CDS TCA 72 bp | CCAGCGCCACCCTCACCCGCGACAAGTGCCCACAGTTaGGCTGTGTCCTCTCGGGGCTGGTCACCGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PAPPSPATSAHS*AVSSRGWSPPS Trigger: ACTGGGCGGTGACCAGCCCCGAGAGGACACAGCTCAACTGTGGGCACTTGTCGCGGGTGAGGGTGGCGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS CAA 72 bp | TCCAGCGCCACCCTCACCCGCGACAAGTGCCCACAGTaGAGCTGTGTCCTCTCGGGGCTGGTCACCGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSATLTRDKCPQ*SCVLSGLVTAQ Trigger: CTGGGCGGTGACCAGCCCCGAGAGGACACAGCTCAACTGTGGGCACTTGTCGCGGGTGAGGGTGGCGCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS GCA 72 bp | ACCTCAAGGTCCAGCGCCACCCTCACCCGCGACAAGTaGCCACAGTTGAGCTGTGTCCTCTCGGGGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TSRSSATLTRDK*PQLSCVLSGLV Trigger: GACCAGCCCCGAGAGGACACAGCTCAACTGTGGGCACTTGTCGCGGGTGAGGGTGGCGCTGGACCTTGAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
||
| CDS CAA 72 bp | AATGGCGCGGCCGTCGTCTTGGCAGTAGAGCTTAAGTaGCTCTCCGTGTTGGGAGCACCGCGCAGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: NGAAVVLAVELK*LSVLGAPRSRR Trigger: GCGGCGGCTGCGCGGTGCTCCCAACACGGAGAGCAACTTAAGCTCTACTGCCAAGACGACGGCCGCGCCATT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000155478.2 |
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| CDS CAA 90 bp | ACCTCAAGGTCCAGCGCCACCCTCACCCGCGACAAGTGCCCACAGTaGAGCTGTGTCCTCTCGGGGCTGGTCACCGCCCAGTATTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: TSRSSATLTRDKCPQ*SCVLSGLVTAQYCP Trigger: TGGGCAATACTGGGCGGTGACCAGCCCCGAGAGGACACAGCTCAACTGTGGGCACTTGTCGCGGGTGAGGGTGGCGCTGGACCTTGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS GCA 72 bp | GAGGTGGCGCATGTCCTCCACTGCATAGAAGGACACTaGTCCCACCTCAAGGTCCAGCGCCACCCTCACCCG | + |
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Preference number: 6 (lower is better) Translates to: EVAHVLHCIEGH*SHLKVQRHPHP Trigger: CGGGTGAGGGTGGCGCTGGACCTTGAGGTGGGAGCAGTGTCCTTCTATGCAGTGGAGGACATGCGCCACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 72 bp | GTCCTCTCGGGGCTGGTCACCGCCCAGTATTGCCCATaGTTGAGTTGCATTGCCCAGACGCCCTCCTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: VLSGLVTAQYCP*LSCIAQTPSSG Trigger: CCCCGAGGAGGGCGTCTGGGCAATGCAACTCAACAATGGGCAATACTGGGCGGTGACCAGCCCCGAGAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 90 bp | CCCACAGTTGAGCTGTGTCCTCTCGGGGCTGGTCACCGCCCAGTATaGCCCATTGTTGAGTTGCATTGCCCAGACGCCCTCCTCGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PTVELCPLGAGHRPV*PIVELHCPDALLGG Trigger: ACCCCCGAGGAGGGCGTCTGGGCAATGCAACTCAACAATGGGCAATACTGGGCGGTGACCAGCCCCGAGAGGACACAGCTCAACTGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 72 bp | CTCTCGGGGCTGGTCACCGCCCAGTATTGCCCATTGTaGAGTTGCATTGCCCAGACGCCCTCCTCGGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LSGLVTAQYCPL*SCIAQTPSSGV Trigger: TACCCCCGAGGAGGGCGTCTGGGCAATGCAACTCAACAATGGGCAATACTGGGCGGTGACCAGCCCCGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS GCA 72 bp | GGGCTGGTCACCGCCCAGTATTGCCCATTGTTGAGTTaGATTGCCCAGACGCCCTCCTCGGGGGTAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GLVTAQYCPLLS*IAQTPSSGVKG Trigger: GCCTTTTACCCCCGAGGAGGGCGTCTGGGCAATGCAACTCAACAATGGGCAATACTGGGCGGTGACCAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS GCA 72 bp | AGCTGTGTCCTCTCGGGGCTGGTCACCGCCCAGTATTaGCCATTGTTGAGTTGCATTGCCCAGACGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SCVLSGLVTAQY*PLLSCIAQTPS Trigger: GGAGGGCGTCTGGGCAATGCAACTCAACAATGGGCAATACTGGGCGGTGACCAGCCCCGAGAGGACACAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CCA 72 bp | GCCAGAACGCGGGTGTTGGTATCAAAGCGGCGAGGATaGTTAGGCAAGTCCTGGGCGCGCTGTCCTAGACGT | + |
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Preference number: 6 (lower is better) Translates to: ARTRVLVSKRRG*LGKSWARCPRR Trigger: ACGTCTAGGACAGCGCGCCCAGGACTTGCCTAACCATCCTCGCCGCTTTGATACCAACACCCGCGTTCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 72 bp | GAGCTGTGTCCTCTCGGGGCTGGTCACCGCCCAGTATaGCCCATTGTTGAGTTGCATTGCCCAGACGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ELCPLGAGHRPV*PIVELHCPDAL Trigger: GAGGGCGTCTGGGCAATGCAACTCAACAATGGGCAATACTGGGCGGTGACCAGCCCCGAGAGGACACAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS GCA 72 bp | GGTCACCGCCCAGTATTGCCCATTGTTGAGTTGCATTaGCCAGACGCCCTCCTCGGGGGTAAAAGGCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GHRPVLPIVELH*PDALLGGKRRE Trigger: CTCACGCCTTTTACCCCCGAGGAGGGCGTCTGGGCAATGCAACTCAACAATGGGCAATACTGGGCGGTGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS GCA 72 bp | GACGCGGAAGGTGTAGAGGTGGCGCATGTCCTCCACTaGATAGAAGGACACTGCTCCCACCTCAAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DAEGVEVAHVLH*IEGHCSHLKVQ Trigger: CTGGACCTTGAGGTGGGAGCAGTGTCCTTCTATGCAGTGGAGGACATGCGCCACCTCTACACCTTCCGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS TCA 72 bp | AGCTGGGCACGCTGCTGCACTTGCTCAGTGTGCTTTTaGACTCCTGGAGGAAGTCTAGGTCCGGCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SWARCCTCSVCF*TPGGSLGPASE Trigger: CTCAGAAGCCGGACCTAGACTTCCTCCAGGAGTTCAAAAGCACACTGAGCAAGTGCAGCAGCGTGCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS TCA 72 bp | CTTTTGAACTCCTGGAGGAAGTCTAGGTCCGGCTTCTaGGCTGTCTCCTGGATCTGGCCGCTGAGTTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LLNSWRKSRSGF*AVSWIWPLSLD Trigger: GTCCAAACTCAGCGGCCAGATCCAGGAGACAGCTCAGAAGCCGGACCTAGACTTCCTCCAGGAGTTCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 90 bp | CTGCTGCCATCTGCTTTAGAAGCTCCTTGCTCTCCCTCTCCTCTGTaGACCGGAACGCTTCATAGTCTTCCAGTACCTTCTTCAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LLPSALEAPCSPSPL*TGTLHSLPVPSSRP Trigger: GGGCCTTGAAGAAGGTACTGGAAGACTATGAAGCGTTCCGGTCAACAGAGGAGAGGGAGAGCAAGGAGCTTCTAAAGCAGATGGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046903.6 |
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| CDS CAA 90 bp | TCACACTTGGACTCACTAGAAGCTCCTTGCTCTCCCTCTCCTCTGTaGACCGGAACGCTTCATAGTCTTCCAGTACCTTCTTCAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SHLDSLEAPCSPSPL*TGTLHSLPVPSSRP Trigger: GGGCCTTGAAGAAGGTACTGGAAGACTATGAAGCGTTCCGGTCAACAGAGGAGAGGGAGAGCAAGGAGCTTCTAGTGAGTCCAAGTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| CDS CAA 90 bp | TCTCTCTCTCTGCCTTGGTCATCCACAACCCTATGCTTCTCACACTaGGACTCACTAGAAGCTCCTTGCTCTCCCTCTCCTCTGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: SLSLPWSSTTLCFSH*DSLEAPCSPSPLLT Trigger: GGTCAACAGAGGAGAGGGAGAGCAAGGAGCTTCTAGTGAGTCCAAGTGTGAGAAGCATAGGGTTGTGGATGACCAAGGCAGAGAGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| CDS GCA 72 bp | CTATGCTTCTCACACTTGGACTCACTAGAAGCTCCTTaGTCTCCCTCTCCTCTGTTGACCGGAACGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LCFSHLDSLEAP*SPSPLLTGTLH Trigger: ATGAAGCGTTCCGGTCAACAGAGGAGAGGGAGAGCAAGGAGCTTCTAGTGAGTCCAAGTGTGAGAAGCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| CDS CCA 72 bp | CATTCCACACTTTATTCTTCATCTCAGATGAGACTGTaGTTGGCTTGGAGCTGGGCACGCTGCTGCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: HSTLYSSSQMRL*LAWSWARCCTC Trigger: GCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAACCACAGTCTCATCTGAGATGAAGAATAAAGTGTGGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CCA 72 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTTaGTCATCCACAACCCTATGCTTCTCACACTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LSLSLSLSLSLP*SSTTLCFSHLD Trigger: GTCCAAGTGTGAGAAGCATAGGGTTGTGGATGACCAAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| CDS CAA 72 bp | ACTTTATTCTTCATCTCAGATGAGACTGTGGTTGGCTaGGAGCTGGGCACGCTGCTGCACTTGCTCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TLFFISDETVVG*ELGTLLHLLSV Trigger: CACACTGAGCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAACCACAGTCTCATCTGAGATGAAGAATAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 72 bp | TCCACACTTTATTCTTCATCTCAGATGAGACTGTGGTaGGCTTGGAGCTGGGCACGCTGCTGCACTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: STLYSSSQMRLW*AWSWARCCTCS Trigger: TGAGCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAACCACAGTCTCATCTGAGATGAAGAATAAAGTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 72 bp | GACTCACTAGAAGCTCCTTGCTCTCCCTCTCCTCTGTaGACCGGAACGCTTCATAGTCTTCCAGTACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DSLEAPCSPSPL*TGTLHSLPVPS Trigger: AGAAGGTACTGGAAGACTATGAAGCGTTCCGGTCAACAGAGGAGAGGGAGAGCAAGGAGCTTCTAGTGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155478.2 |
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| CDS CAA 90 bp | GGGAAACATTCCACACTTTATTCTTCATCTCAGATGAGACTGTGGTaGGCTTGGAGCTGGGCACGCTGCTGCACTTGCTCAGTGTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: GKHSTLYSSSQMRLW*AWSWARCCTCSVCF Trigger: AAAGCACACTGAGCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAACCACAGTCTCATCTGAGATGAAGAATAAAGTGTGGAATGTTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 90 bp | CCTAGACGTACGCTCTTTAGATCCAGGGACAAGATGAGACGGGGGTaGGCTGTGTCTGGATCCAAAGTGAGTTCCACTTTCTCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PRRTLFRSRDKMRRG*AVSGSKVSSTFSSF Trigger: GAAAGAAGAGAAAGTGGAACTCACTTTGGATCCAGACACAGCCAACCCCCGTCTCATCTTGTCCCTGGATCTAAAGAGCGTACGTCTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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| CDS CAA 90 bp | ACATTCCACACTTTATTCTTCATCTCAGATGAGACTGTGGTTGGCTaGGAGCTGGGCACGCTGCTGCACTTGCTCAGTGTGCTTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: TFHTLFFISDETVVG*ELGTLLHLLSVLLN Trigger: GTTCAAAAGCACACTGAGCAAGTGCAGCAGCGTGCCCAGCTCCAAGCCAACCACAGTCTCATCTGAGATGAAGAATAAAGTGTGGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046903.6 ENSMUST00000109213.9 |
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