RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM69 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033368

Ensembl transcript IDs: ENSMUST00000036089.8

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGGATACTTGCCCGCCCTCATAATCCAGGTACACGCCCACTCTTCTaGGGTCGCCTAGAGTCAGACTACGGGAGGGCAAATCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: RILARPHNPGTRPLF*GRLESDYGRANPGP
Trigger: AGGCCCTGGATTTGCCCTCCCGTAGTCTGACTCTAGGCGACCTCAGAAGAGTGGGCGTGTACCTGGATTATGAGGGCGGGCAAGTATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS GCA 90 bp TGTGATGTCTGTGAGGAAGTCGAAGGAGTTCTGCTGTTCCATCCGTaGCTGAATGGTCGCCAGCATGTCTTTGGCAACAAGACACTGCTC +
Preference number: 5 (lower is better)
Translates to: CDVCEEVEGVLLFHP*LNGRQHVFGNKTLL
Trigger: GAGCAGTGTCTTGTTGCCAAAGACATGCTGGCGACCATTCAGGCACGGATGGAACAGCAGAACTCCTTCGACTTCCTCACAGACATCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 90 bp TTACTGAACAGTTTCAGGTTCTCTCCATGCTCTGGGCACTGTGGATaGCCCTTGAGCAGGGGTAACTTCTTAATCTTCTCCACGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLNSFRFSPCSGHCG*PLSRGNFLIFSTSF
Trigger: GAAGCTCGTGGAGAAGATTAAGAAGTTACCCCTGCTCAAGGGCCATCCACAGTGCCCAGAGCATGGAGAGAACCTGAAACTGTTCAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS TCA 90 bp GTGCATCCTTGCATTGAAAGCAGATCATTTTGCCTTCTGGCTTACTaGACAGTTTCAGGTTCTCTCCATGCTCTGGGCACTGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: VHPCIESRSFCLLAY*TVSGSLHALGTVDG
Trigger: GCCATCCACAGTGCCCAGAGCATGGAGAGAACCTGAAACTGTTCAGTAAGCCAGAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 90 bp AGACAACCGTGCATCCTTGCATTGAAAGCAGATCATTTTGCCTTCTaGCTTACTGAACAGTTTCAGGTTCTCTCCATGCTCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: RQPCILALKADHFAF*LTEQFQVLSMLWAL
Trigger: CAGTGCCCAGAGCATGGAGAGAACCTGAAACTGTTCAGTAAGCCAGAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCACGGTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 90 bp AGAGTCAGACTACGGGAGGGCAAATCCAGGGCCTTTAGATCTGTTTaGTTTCTTAGTCTTAGAAGCCAGAATCCTTGCTCTGGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: RVRLREGKSRAFRSV*FLSLRSQNPCSGVR
Trigger: TCTGACTCCAGAGCAAGGATTCTGGCTTCTAAGACTAAGAAACCAAACAGATCTAAAGGCCCTGGATTTGCCCTCCCGTAGTCTGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS TCA 90 bp AGGAAATCCTTAGACTGCCCCATAGACAACCGTGCATCCTTGCATTaGAAGCAGATCATTTTGCCTTCTGGCTTACTGAACAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: RKSLDCPIDNRASLH*KQIILPSGLLNSFR
Trigger: CCTGAAACTGTTCAGTAAGCCAGAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCACGGTTGTCTATGGGGCAGTCTAAGGATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS GCA 90 bp TTCAGAGATCTGCAGGAAATCCTTAGACTGCCCCATAGACAACCGTaGATCCTTGCATTGAAAGCAGATCATTTTGCCTTCTGGCTTACT +
Preference number: 5 (lower is better)
Translates to: FRDLQEILRLPHRQP*ILALKADHFAFWLT
Trigger: AGTAAGCCAGAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCACGGTTGTCTATGGGGCAGTCTAAGGATTTCCTGCAGATCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 90 bp TCCACGAGCTTCTCCAGCACGAGGTTGAATGTACAGTTGCTATACTaGCATAGCATCTTACAGTCAGGACAGAATGTTTCCTTTGAATGC +
Preference number: 5 (lower is better)
Translates to: STSFSSTRLNVQLLY*HSILQSGQNVSFEC
Trigger: GCATTCAAAGGAAACATTCTGTCCTGACTGTAAGATGCTATGCCAGTATAGCAACTGTACATTCAACCTCGTGCTGGAGAAGCTCGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS TCA 72 bp AGGAAGTCGAAGGAGTTCTGCTGTTCCATCCGTGCCTaGATGGTCGCCAGCATGTCTTTGGCAACAAGACAC +
Preference number: 6 (lower is better)
Translates to: RKSKEFCCSIRA*MVASMSLATRH
Trigger: GTGTCTTGTTGCCAAAGACATGCTGGCGACCATTCAGGCACGGATGGAACAGCAGAACTCCTTCGACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 72 bp AGTCGAAGGAGTTCTGCTGTTCCATCCGTGCCTGAATaGTCGCCAGCATGTCTTTGGCAACAAGACACTGCT +
Preference number: 6 (lower is better)
Translates to: SRRSSAVPSVPE*SPACLWQQDTA
Trigger: AGCAGTGTCTTGTTGCCAAAGACATGCTGGCGACCATTCAGGCACGGATGGAACAGCAGAACTCCTTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 72 bp GTTCCATCCGTGCCTGAATGGTCGCCAGCATGTCTTTaGCAACAAGACACTGCTCCTGAATCTGGTTCAGAT +
Preference number: 6 (lower is better)
Translates to: VPSVPEWSPACL*QQDTAPESGSD
Trigger: ATCTGAACCAGATTCAGGAGCAGTGTCTTGTTGCCAAAGACATGCTGGCGACCATTCAGGCACGGATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 90 bp AAAGGTGTAAAGATGGGTCATGGTTGTAGCGTTGTAGAAGGATACTaGCCCGCCCTCATAATCCAGGTACACGCCCACTCTTCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: KGVKMGHGCSVVEGY*PALIIQVHAHSSEV
Trigger: GACCTCAGAAGAGTGGGCGTGTACCTGGATTATGAGGGCGGGCAAGTATCCTTCTACAACGCTACAACCATGACCCATCTTTACACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS TCA 72 bp GTCGCCAGCATGTCTTTGGCAACAAGACACTGCTCCTaGATCTGGTTCAGATTCACCTCCATCTCCTCATTC +
Preference number: 6 (lower is better)
Translates to: VASMSLATRHCS*IWFRFTSISSF
Trigger: GAATGAGGAGATGGAGGTGAATCTGAACCAGATTCAGGAGCAGTGTCTTGTTGCCAAAGACATGCTGGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS GCA 72 bp AGCTCCTCCGTAAAGAAACGGACAGCTTCAGAGATCTaGAGGAAATCCTTAGACTGCCCCATAGACAACCGT +
Preference number: 6 (lower is better)
Translates to: SSSVKKRTASEI*RKSLDCPIDNR
Trigger: ACGGTTGTCTATGGGGCAGTCTAAGGATTTCCTGCAGATCTCTGAAGCTGTCCGTTTCTTTACGGAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 72 bp TGCATTTCCTTCCAGATGATATACTGGATAGGACCTTaGAAGCGGCCTAGGCTCAGCTTTTTGGCGATGAGC +
Preference number: 6 (lower is better)
Translates to: CISFQMIYWIGP*KRPRLSFLAMS
Trigger: GCTCATCGCCAAAAAGCTGAGCCTAGGCCGCTTCAAAGGTCCTATCCAGTATATCATCTGGAAGGAAATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 90 bp CTGAATTGTTCTGAGAGACTGAAGCTCCTTCAGGGTTGTCTGAAGTaGGCTCTGATAGATAGCAAGCTCCTCCGTAAAGAAACGGACAGC +
Preference number: 6 (lower is better)
Translates to: LNCSERLKLLQGCLK*ALIDSKLLRKETDS
Trigger: GCTGTCCGTTTCTTTACGGAGGAGCTTGCTATCTATCAGAGCCAACTTCAGACAACCCTGAAGGAGCTTCAGTCTCTCAGAACAATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 90 bp AGAATAGCCTGCATTTCCTTCCAGATGATATACTGGATAGGACCTTaGAAGCGGCCTAGGCTCAGCTTTTTGGCGATGAGCTGTCTAGGT +
Preference number: 6 (lower is better)
Translates to: RIACISFQMIYWIGP*KRPRLSFLAMSCLG
Trigger: ACCTAGACAGCTCATCGCCAAAAAGCTGAGCCTAGGCCGCTTCAAAGGTCCTATCCAGTATATCATCTGGAAGGAAATGCAGGCTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS GCA 72 bp CTGCAGGAAATCCTTAGACTGCCCCATAGACAACCGTaGATCCTTGCATTGAAAGCAGATCATTTTGCCTTC +
Preference number: 6 (lower is better)
Translates to: LQEILRLPHRQP*ILALKADHFAF
Trigger: GAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCACGGTTGTCTATGGGGCAGTCTAAGGATTTCCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 72 bp GAGAGAATAGCCTGCATTTCCTTCCAGATGATATACTaGATAGGACCTTTGAAGCGGCCTAGGCTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: ERIACISFQMIY*IGPLKRPRLSF
Trigger: AAAGCTGAGCCTAGGCCGCTTCAAAGGTCCTATCCAGTATATCATCTGGAAGGAAATGCAGGCTATTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 72 bp CTACGGGAGGGCAAATCCAGGGCCTTTAGATCTGTTTaGTTTCTTAGTCTTAGAAGCCAGAATCCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: LREGKSRAFRSV*FLSLRSQNPCS
Trigger: AGAGCAAGGATTCTGGCTTCTAAGACTAAGAAACCAAACAGATCTAAAGGCCCTGGATTTGCCCTCCCGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 72 bp TCTGAGAGACTGAAGCTCCTTCAGGGTTGTCTGAAGTaGGCTCTGATAGATAGCAAGCTCCTCCGTAAAGAA +
Preference number: 6 (lower is better)
Translates to: SERLKLLQGCLK*ALIDSKLLRKE
Trigger: TTCTTTACGGAGGAGCTTGCTATCTATCAGAGCCAACTTCAGACAACCCTGAAGGAGCTTCAGTCTCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 90 bp CAGGAAATCCTTAGACTGCCCCATAGACAACCGTGCATCCTTGCATaGAAAGCAGATCATTTTGCCTTCTGGCTTACTGAACAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: QEILRLPHRQPCILA*KADHFAFWLTEQFQ
Trigger: CTGAAACTGTTCAGTAAGCCAGAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCACGGTTGTCTATGGGGCAGTCTAAGGATTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 90 bp ATGATATACTGGATAGGACCTTTGAAGCGGCCTAGGCTCAGCTTTTaGGCGATGAGCTGTCTAGGTACAATTGTCTTCATTCCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: MIYWIGPLKRPRLSF*AMSCLGTIVFIPFS
Trigger: GGAGAAAGGAATGAAGACAATTGTACCTAGACAGCTCATCGCCAAAAAGCTGAGCCTAGGCCGCTTCAAAGGTCCTATCCAGTATATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS TCA 72 bp TTAGACTGCCCCATAGACAACCGTGCATCCTTGCATTaGAAGCAGATCATTTTGCCTTCTGGCTTACTGAAC +
Preference number: 6 (lower is better)
Translates to: LDCPIDNRASLH*KQIILPSGLLN
Trigger: GTTCAGTAAGCCAGAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCACGGTTGTCTATGGGGCAGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS TCA 72 bp TCTGGATCATCAGGCATTACCTGCTTAACATCACAGTaGCACACACTGGTCTGGCTTTTGGATAACACCAGA +
Preference number: 6 (lower is better)
Translates to: SGSSGITCLTSQ*HTLVWLLDNTR
Trigger: TCTGGTGTTATCCAAAAGCCAGACCAGTGTGTGTCACTGTGATGTTAAGCAGGTAATGCCTGATGATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 72 bp CTTAGACTGCCCCATAGACAACCGTGCATCCTTGCATaGAAAGCAGATCATTTTGCCTTCTGGCTTACTGAA +
Preference number: 6 (lower is better)
Translates to: LRLPHRQPCILA*KADHFAFWLTE
Trigger: TTCAGTAAGCCAGAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCACGGTTGTCTATGGGGCAGTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 72 bp TGCATCCTTGCATTGAAAGCAGATCATTTTGCCTTCTaGCTTACTGAACAGTTTCAGGTTCTCTCCATGCTC +
Preference number: 6 (lower is better)
Translates to: CILALKADHFAF*LTEQFQVLSML
Trigger: GAGCATGGAGAGAACCTGAAACTGTTCAGTAAGCCAGAAGGCAAAATGATCTGCTTTCAATGCAAGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CCA 72 bp GATCTTGTATCACCACTTTTGAGGGTAAATGGGTGGTaGTTGGATCACTCATTTCAACATAGTTGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: DLVSPLLRVNGW*LDHSFQHSCLD
Trigger: ATCCAGGCAACTATGTTGAAATGAGTGATCCAACCACCACCCATTTACCCTCAAAAGTGGTGATACAAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8
CDS CAA 72 bp TTCTTAATCTTCTCCACGAGCTTCTCCAGCACGAGGTaGAATGTACAGTTGCTATACTGGCATAGCATCTTA +
Preference number: 6 (lower is better)
Translates to: FLIFSTSFSSTR*NVQLLYWHSIL
Trigger: TAAGATGCTATGCCAGTATAGCAACTGTACATTCAACCTCGTGCTGGAGAAGCTCGTGGAGAAGATTAAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036089.8