Pregenerated sensors for TRIM63 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028834Ensembl transcript IDs: ENSMUST00000030638.7, ENSMUST00000105875.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGCCTTGAACTCATAGAGATCCAACTGCCTCTGCCTCCAGAGTaGTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTGTGC | + |
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Preference number: 1 (lower is better) Translates to: AGLELIEIQLPLPPE*WDQRVCAPRPSPLC Trigger: GCACAAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGAGGCAGTTGGATCTCTATGAGTTCAAGGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR GCA 90 bp | TTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACAGTACATTaGCCCTCTCTAGGCCACCGAGTGAGACCCAGCCCTCCCACCAAG | + |
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Preference number: 1 (lower is better) Translates to: FSPIPMFGDGHCTVH*PSLGHRVRPSPPTK Trigger: CTTGGTGGGAGGGCTGGGTCTCACTCGGTGGCCTAGAGAGGGGCAATGTACTGTACAGTGCCCATCCCCAAACATGGGGATAGGACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR CCA 90 bp | GGCCTTGAACTCATAGAGATCCAACTGCCTCTGCCTCCAGAGTGCTaGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTGTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: GLELIEIQLPLPPEC*DQRVCAPRPSPLCK Trigger: TTTGCACAAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGAGGCAGTTGGATCTCTATGAGTTCAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTTGTTTCAGCAGCTGCTaGACACAGTGGTGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SASRVLGSKGVCPKAQPLCFSSC*TQWWGA Trigger: GGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACA...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR GCA 90 bp | CAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACCTCCCGAGATGGGCCTaGCCCCACCTCCCCCGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QHITQIQSYPHVWGWALYLPRWA*PHLPRL Trigger: GAGACGGGGGAGGTGGGGGCAGGCCCATCTCGGGAG...GTACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTGTCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGCTCCCGAGATGGGCCTaGCCCCACCTCCCCCGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KCPVTFWIHFQLCFSSCWLPRWA*PHLPRL Trigger: GAGACGGGGGAGGTGGGGGCAGGCCCATCTCGGGAG...CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCATGTTTCAGCAGCTGCTaGACACAGTGGTGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPCFSSC*TQWWGA Trigger: GGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACA...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTTGTGACAATCGCCAGTCACACAATGACCAGGCGTGATCATACAAAAGTTCCCTATGCTAGTCCCTaGTCTCTGAGCAGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HFVTIASHTMTRRDHTKVPYASP*SLSREK Trigger: CTTCTCTCTGCTCAGAGAGCAGGGACTAGCATAGGG...AACTTTTGTATGATCACGCCTGGTCATTGTGTGACTGGCGATTGTCACAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCACTAGTCCCTGCTCTCTaGGCAGAGAGAAGACACACT | + |
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Preference number: 2 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPLVPAL*AERRHT Trigger: AGTGTGTCTTCTCTCTGCTCAGAGAGCAGGGACTAG...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR CAA 90 bp | AAATATTTCATTTCGCACCAACGTAGAAAAGTGTCCTGTGACGTTTaGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAGTG | + |
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Preference number: 2 (lower is better) Translates to: KYFISHQRRKVSCDV*DTFPIVFQQLLDTV Trigger: CACTGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTTTTCTACGTTGGTGCGAAATGAAATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR CCA 72 bp | CTCATAGAGATCCAACTGCCTCTGCCTCCAGAGTGCTaGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: LIEIQLPLPPEC*DQRVCAPRPSP Trigger: GGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGAGGCAGTTGGATCTCTATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTGTCCTATCCCCATGTTaGGGGATGGGCACTGTACAG | + |
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Preference number: 3 (lower is better) Translates to: SASRVLGSKGVCPKAQPLVLSPC*GMGTVQ Trigger: CTGTACAGTGCCCATCCCCAAACATGGGGATAGGAC...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR GCA 72 bp | ATCCCCATGTTTGGGGATGGGCACTGTACAGTACATTaGCCCTCTCTAGGCCACCGAGTGAGACCCAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: IPMFGDGHCTVH*PSLGHRVRPSP Trigger: AGGGCTGGGTCTCACTCGGTGGCCTAGAGAGGGGCAATGTACTGTACAGTGCCCATCCCCAAACATGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTGGCATCTCTATTGTCTaGGCTTCCTTCCCACTTTGT | + |
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Preference number: 3 (lower is better) Translates to: SASRVLGSKGVCPKAQPLGISIV*ASFPLC Trigger: ACAAAGTGGGAAGGAAGCCAAGACAATAGAGATGCC...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR TCA 72 bp | ACAGTGGTGGGGAGCCCTATGCTAGTCCCTGCTCTCTaGGCAGAGAGAAGACACACTTCCCTATTGTACCCC | + |
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Preference number: 3 (lower is better) Translates to: TVVGSPMLVPAL*AERRHTSLLYP Trigger: GGGGTACAATAGGGAAGTGTGTCTTCTCTCTGCTCAGAGAGCAGGGACTAGCATAGGGCTCCCCACCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR TCA 72 bp | CTGGCCTGTAACTCTCCATGTAGACCAGGCTGGCCTTaGACTCATAGAGATCCAACTGCCTCTGCCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LACNSPCRPGWP*THRDPTASASR Trigger: TCTGGAGGCAGAGGCAGTTGGATCTCTATGAGTTCAAGGCCAGCCTGGTCTACATGGAGAGTTACAGGCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR CAA 90 bp | CAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACTGGATACATTTCCAATaGTGTTTCAGCAGCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: QHITQIQSYPHVWGWALYWIHFQ*CFSSCW Trigger: CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCA...GTACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR-3UTR CAA 90 bp | CACTTTGTGACAATCGCCAGTCACACAATGACCAGGCGTGATCATACAAAAGTTTGGATACATTTCCAATaGTGTTTCAGCAGCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: HFVTIASHTMTRRDHTKVWIHFQ*CFSSCW Trigger: CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCA...AACTTTTGTATGATCACGCCTGGTCATTGTGTGACTGGCGATTGTCACAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| 3UTR TCA 72 bp | CTTTGTGACAATCGCCAGTCACACAATGACCAGGCGTaGTCATACAAAAGTTCTCGTACAAAAAGCACCAAA | + |
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Preference number: 3 (lower is better) Translates to: LCDNRQSHNDQA*SYKSSRTKSTK Trigger: TTTGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACTGGCGATTGTCACAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | TCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCTAGTCCCTGCTCTCTGCCTCCTGCTCCTGCGTaGTCCGCTGCAGCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SAAAGHSGGEPYASPCSLPPAPA*SAAAAR Trigger: GCGAGCTGCTGCAGCGGATCACGCAGGAGCAGGAGG...CAGAGAGCAGGGACTAGCATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR GCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTCCCAGCTTCTCCTCCTaGTCCTGCGTGATCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SASRVLGSKGVCPKAQPLPSFSS*SCVIRC Trigger: GCAGCGGATCACGCAGGAGCAGGAGGAGAAGCTGGG...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTTCCAGACATGGACACTaGGCCACCGCGGTTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SASRVLGSKGVCPKAQPLSRHGH*ATAVGP Trigger: TGGACCAACCGCGGTGGCTCAGTGTCCATGTCTGGA...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR GCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTTCTGCACTCGGTCGTTaGCCGCCACCAGCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SASRVLGSKGVCPKAQPLSALGR*PPPAWR Trigger: TCTCCATGCTGGTGGCGGGCAACGACCGAGTGCAGA...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR GCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTTCCTGCGTGATCCGCTaGAGCAGCTCGCTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SASRVLGSKGVCPKAQPLSCVIR*SSSLFF Trigger: GAAGAAGAGCGAGCTGCTGCAGCGGATCACGCAGGA...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTCAGGAGTCCTCCAGCTaGGAGATGATCGTCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: SASRVLGSKGVCPKAQPLQESSS*EMIVCT Trigger: AGTGCAGACGATCATCTCTCAGCTGGAGGACTCCTG...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR GCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTTCTCCTTGGTCACTCTaGAGGAGTCCTCCAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SASRVLGSKGVCPKAQPLSPWSL*RSPPAE Trigger: CTCAGCTGGAGGACTCCTGCAGAGTGACCAAGGAGA...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTCCTGGAAGATGTCGTTaGCACACTTCCGGCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SASRVLGSKGVCPKAQPLPGRCR*HTSGRG Trigger: ACCTCTGCCGGAAGTGTGCCAACGACATCTTCCAGG...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | TCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCTAGTCCCTGCTCTCTGTCCATGATCACTTCATaGCGGCACGAGGGGCAACGG | + |
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Preference number: 4 (lower is better) Translates to: SAAAGHSGGEPYASPCSLSMITS*RHEGQR Trigger: CCGTTGCCCCTCGTGCCGCCATGAAGTGATCATGGA...CAGAGAGCAGGGACTAGCATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | TCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCTAGTCCCTGCTCTCTGAGCTCCTCCTTCACCTaGTGGCTATTCTCCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SAAAGHSGGEPYASPCSLSSSFT*WLFSLV Trigger: GACCAAGGAGAATAGCCACCAGGTGAAGGAGGAGCT...CAGAGAGCAGGGACTAGCATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | AATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCTAGTCCCCCTCCAGCTGAGAGATaGTCGTCTGCACTCGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: NCVSAAAGHSGGEPYASPPPAER*SSALGR Trigger: ACGACCGAGTGCAGACGATCATCTCTCAGCTGGAGG...GGGACTAGCATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR GCA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTTCTGTCCTTGGAAGATaGTTTGCAAAGGGGCAACCT | + |
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Preference number: 4 (lower is better) Translates to: SASRVLGSKGVCPKAQPLSVLGR*FAKGQP Trigger: AGGTTGCCCCTTTGCAAAGCATCTTCCAAGGACAGA...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR GCA 90 bp | ACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCCCAGCTTCTCCTCCTaGTCCTGCGTGATCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TFPIVFQQLLDTVVGSPMPSFSS*SCVIRC Trigger: GCAGCGGATCACGCAGGAGCAGGAGGAGAAGCTGGG...CATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | AATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCTAGTCCCGGCTCATCCAGGGACTaGATGGCGGTCTCCACAAGT | + |
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Preference number: 4 (lower is better) Translates to: NCVSAAAGHSGGEPYASPGSSRD*MAVSTS Trigger: ACTTGTGGAGACCGCCATCCAGTCCCTGGATGAGCC...GGGACTAGCATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR GCA 90 bp | ACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGTCTGCACTCGGTCGTTaGCCGCCACCAGCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TFPIVFQQLLDTVVGSPMSALGR*PPPAWR Trigger: TCTCCATGCTGGTGGCGGGCAACGACCGAGTGCAGA...CATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | ACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGTCCTTGCACATCGGGTaGCTGCCTTTCTGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TFPIVFQQLLDTVVGSPMSLHIG*LPFCRG Trigger: GCCCCTGCAGAAAGGCAGCCACCCGATGTGCAAGGA...CATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | AATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCTAGTCCCAGGGTGTCAAACTTCTaGCTCAGCTCCTCCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: NCVSAAAGHSGGEPYASPRVSNF*LSSSFT Trigger: GGTGAAGGAGGAGCTGAGTCAGAAGTTTGACACCCT...GGGACTAGCATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCACCTCCTGCTCCTGCGTaGTCCGCTGCAGCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPPPAPA*SAAAAR Trigger: GCGAGCTGCTGCAGCGGATCACGCAGGAGCAGGAGG...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | ACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCCAGCTGGCAGCCCTTaGAGGCTTCTACAATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TFPIVFQQLLDTVVGSPMPAGSP*RLLQCS Trigger: AGAGCATTGTAGAAGCCTCCAAGGGCTGCCAGCTGG...CATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR GCA 90 bp | ACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGGTGGACTTTTCCAGCTaGTCCCTGTACTGGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: TFPIVFQQLLDTVVGSPMVDFSS*SLYWRI Trigger: GATCCTCCAGTACAGGGAGCAGCTGGAAAAGTCCAC...CATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | CACTTTGTGACAATCGCCAGTCACACAATGACCAGGCGTGATCATACAAAAGTTTCCAGACATGGACACTaGGCCACCGCGGTTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HFVTIASHTMTRRDHTKVSRHGH*ATAVGP Trigger: TGGACCAACCGCGGTGGCTCAGTGTCCATGTCTGGA...AACTTTTGTATGATCACGCCTGGTCATTGTGTGACTGGCGATTGTCACAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | CAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACCTGAGCCACCGCGGTTaGTCCAGTAGGGATTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: QHITQIQSYPHVWGWALYLSHRG*SSRDSQ Trigger: CTGCGAATCCCTACTGGACCAACCGCGGTGGCTCAG...GTACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | CAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACTCCTTGCACATCGGGTaGCTGCCTTTCTGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QHITQIQSYPHVWGWALYSLHIG*LPFCRG Trigger: GCCCCTGCAGAAAGGCAGCCACCCGATGTGCAAGGA...GTACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR CCA 90 bp | ACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGCGGTCTCCACAAGTTTaGTGGACTTTTCCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TFPIVFQQLLDTVVGSPMRSPQV*WTFPAA Trigger: AGCAGCTGGAAAAGTCCACCAAACTTGTGGAGACCG...CATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACACCTCCAGCTGAGAGATaGTCGTCTGCACTCGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: SCDVLDTFPIVFQQLLDTPPAER*SSALGR Trigger: ACGACCGAGTGCAGACGATCATCTCTCAGCTGGAGG...TGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS-3UTR TCA 90 bp | ACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTAGAGCTGCTTGGCACTTaGGAGGAAGGTAGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTYNTNSVLSPCLGMGTVELLGT*EEGSPS Trigger: GGAGGGGCTACCTTCCTCTCAAGTGCCAAGCAGCTC...TACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGTGCAAAACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGGAGCTGCTTGGCACTTaGGAGGAAGGTAGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLCKTTYNTNSVLSPCLGELLGT*EEGSPS Trigger: GGAGGGGCTACCTTCCTCTCAAGTGCCAAGCAGCTC...CCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGTTTTGCACAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAAGGCCGTACACCCCGTaGCGGTCCATGATCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCDVLDTFPIVFQQLLDTRPYTP*RSMITS Trigger: TGAAGTGATCATGGACCGGCACGGGGTGTACGGCCT...TGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGAGGCCGTACACCCCGTaGCGGTCCATGATCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KCPVTFWIHFQLCFSSCWRPYTP*RSMITS Trigger: TGAAGTGATCATGGACCGGCACGGGGTGTACGGCCT...CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACAGTGGTGGGGAGCCCTATGTCTGTCCTTGGAAGATaGTTTGCAAAGGGGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TFPIVFQQLLDTVVGSPMSVLGR*FAKGQP Trigger: AGGTTGCCCCTTTGCAAAGCATCTTCCAAGGACAGA...CATAGGGCTCCCCACCACTGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGTCCTGCGTGATCCGCTaGAGCAGCTCGCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCPVTFWIHFQLCFSSCWSCVIR*SSSLFF Trigger: GAAGAAGAGCGAGCTGCTGCAGCGGATCACGCAGGA...CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGCGGCAGAGGTTGTGTTaGCAGGGCAGGATGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: KCPVTFWIHFQLCFSSCWRQRLC*QGRMTT Trigger: TGTGGTCATCCTGCCCTGCCAACACAACCTCTGCCG...CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | CAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACAACGACCTCCAGACATaGACACTGAGCCACCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QHITQIQSYPHVWGWALYNDLQT*TLSHRG Trigger: ACCGCGGTGGCTCAGTGTCCATGTCTGGAGGTCGTT...GTACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGTCCATGATCACTTCATaGCGGCACGAGGGGCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: KCPVTFWIHFQLCFSSCWSMITS*RHEGQR Trigger: CCGTTGCCCCTCGTGCCGCCATGAAGTGATCATGGA...CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTGTGACAATCGCCAGTCACACAATGACCAGGCGTGATCATACAAAAGTTGGCTCATCCAGGGACTaGATGGCGGTCTCCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HFVTIASHTMTRRDHTKVGSSRD*MAVSTS Trigger: ACTTGTGGAGACCGCCATCCAGTCCCTGGATGAGCC...AACTTTTGTATGATCACGCCTGGTCATTGTGTGACTGGCGATTGTCACAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTGCAAAACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGAACGACCTCCAGACATaGACACTGAGCCACCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLCKTTYNTNSVLSPCLGNDLQT*TLSHRG Trigger: ACCGCGGTGGCTCAGTGTCCATGTCTGGAGGTCGTT...CCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGTTTTGCACAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTGTGACAATCGCCAGTCACACAATGACCAGGCGTGATCATACAAAAGTTTGCCCGCCACCAGCATaGAGATGCAGTTACTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFVTIASHTMTRRDHTKVCPPPA*RCSYSA Trigger: AGCTGAGTAACTGCATCTCCATGCTGGTGGCGGGCA...AACTTTTGTATGATCACGCCTGGTCATTGTGTGACTGGCGATTGTCACAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AAACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTCTCCTTGGTCACTCTaGAGGAGTCCTCCAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQHITQIQSYPHVWGWALSPWSL*RSPPAE Trigger: CTCAGCTGGAGGACTCCTGCAGAGTGACCAAGGAGA...CAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCACCTGGAAGATGTCGTTaGCACACTTCCGGCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPPGRCR*HTSGRG Trigger: ACCTCTGCCGGAAGTGTGCCAACGACATCTTCCAGG...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCATGCCCGCCACCAGCATaGAGATGCAGTTACTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPCPPPA*RCSYSA Trigger: AGCTGAGTAACTGCATCTCCATGCTGGTGGCGGGCA...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGGGTGGCTATTCTCCTTaGTCACTCTGCAGGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCPVTFWIHFQLCFSSCWGGYSP*SLCRSP Trigger: AGGACTCCTGCAGAGTGACCAAGGAGAATAGCCACC...CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | CAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACAGCTCCTCCTTCACCTaGTGGCTATTCTCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHITQIQSYPHVWGWALYSSSFT*WLFSLV Trigger: GACCAAGGAGAATAGCCACCAGGTGAAGGAGGAGCT...GTACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCACCAGCTGGCAGCCCTTaGAGGCTTCTACAATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPPAGSP*RLLQCS Trigger: AGAGCATTGTAGAAGCCTCCAAGGGCTGCCAGCTGG...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGACACACTGTCCCAAAGTCAATaGCCCTCAAGGCCTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SCDVLDTFPIVFQQLLDTLSQSQ*PSRPLL Trigger: TAGCAGAGGCCTTGAGGGCCATTGACTTTGGGACAG...TGTGTCCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | CAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACCTGTCCCAAAGTCAATaGCCCTCAAGGCCTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QHITQIQSYPHVWGWALYLSQSQ*PSRPLL Trigger: TAGCAGAGGCCTTGAGGGCCATTGACTTTGGGACAG...GTACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCAAGGGTGTCAAACTTCTaGCTCAGCTCCTCCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPRVSNF*LSSSFT Trigger: GGTGAAGGAGGAGCTGAGTCAGAAGTTTGACACCCT...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCCTGTGACGTTTTGGATACATTTCCAATTGTGTTTCAGCAGCTGCTGGATGTTCTCAAAGCCTTaGTCTGTCTTCCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCPVTFWIHFQLCFSSCWMFSKP*SVFPSW Trigger: CCAGCTGGGGAAGACAGAGCAAGGCTTTGAGAACAT...CCAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | ACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTAGGTGGCTATTCTCCTTaGTCACTCTGCAGGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTYNTNSVLSPCLGMGTVGGYSP*SLCRSP Trigger: AGGACTCCTGCAGAGTGACCAAGGAGAATAGCCACC...TACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCAATGTTCTCAAAGCCTTaGTCTGTCTTCCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPMFSKP*SVFPSW Trigger: CCAGCTGGGGAAGACAGAGCAAGGCTTTGAGAACAT...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | AAATATTTCATTTCGCACCAACGTAGAAAAGTGTCCTGTGACGTTTTGGATACACGGCAGAGGTTGTGTTaGCAGGGCAGGATGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: KYFISHQRRKVSCDVLDTRQRLC*QGRMTT Trigger: TGTGGTCATCCTGCCCTGCCAACACAACCTCTGCCG...TGTATCCAAAACGTCACAGGACACTTTTCTACGTTGGTGCGAAATGAAATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CCA 90 bp | ACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACGGTCTCCACAAGTTTaGTGGACTTTTCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTYNTNSVLSPCLGMGTVRSPQV*WTFPAA Trigger: AGCAGCTGGAAAAGTCCACCAAACTTGTGGAGACCG...TACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AAACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGATGCTCTTGATGAGCTaGTTGGCACTTGAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQHITQIQSYPHVWGWALMLLMS*LALERK Trigger: CTTCCTCTCAAGTGCCAAGCAGCTCATCAAGAGCAT...CAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCAATGCTCTTGATGAGCTaGTTGGCACTTGAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPMLLMS*LALERK Trigger: CTTCCTCTCAAGTGCCAAGCAGCTCATCAAGAGCAT...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AAATATTTCATTTCGCACCAACGTAGAAAAGTGTCCTGTGACGTTTTGGATACAGTGGACTTTTCCAGCTaGTCCCTGTACTGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KYFISHQRRKVSCDVLDTVDFSS*SLYWRI Trigger: GATCCTCCAGTACAGGGAGCAGCTGGAAAAGTCCAC...TGTATCCAAAACGTCACAGGACACTTTTCTACGTTGGTGCGAAATGAAATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| 3UTR CAA 72 bp | ATTTCGCACCAACGTAGAAAAGTGTCCTGTGACGTTTaGGATACATTTCCAATTGTGTTTCAGCAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISHQRRKVSCDV*DTFPIVFQQLL Trigger: CAGCAGCTGCTGAAACACAATTGGAAATGTATCCAAAACGTCACAGGACACTTTTCTACGTTGGTGCGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR GCA 90 bp | AAATATTTCATTTCGCACCAACGTAGAAAAGTGTCCTGTGACGTTTTGGATACACCACCAGCATGGAGATaGAGTTACTCAGCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KYFISHQRRKVSCDVLDTPPAWR*SYSAQS Trigger: AGACTGAGCTGAGTAACTGCATCTCCATGCTGGTGG...TGTATCCAAAACGTCACAGGACACTTTTCTACGTTGGTGCGAAATGAAATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTCCGGCAGAGGTTGTGTaGGCAGGGCAGGATGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SASRVLGSKGVCPKAQPLPAEVV*AGQDDH Trigger: GTGGTCATCCTGCCCTGCCAACACAACCTCTGCCGG...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS TCA 90 bp | ATGGCGGCACGAGGGGCAACGGAAACGACCTCCAGACATGGACACTaGGCCACCGCGGTTGGTCCAGTAGGGATTCGCAGCCTGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: MAARGATETTSRHGH*ATAVGPVGIRSLED Trigger: ATCTTCCAGGCTGCGAATCCCTACTGGACCAACCGCGGTGGCTCAGTGTCCATGTCTGGAGGTCGTTTCCGTTGCCCCTCGTGCCGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS CCA 90 bp | TCACTTCATGGCGGCACGAGGGGCAACGGAAACGACCTCCAGACATaGACACTGAGCCACCGCGGTTGGTCCAGTAGGGATTCGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLHGGTRGNGNDLQT*TLSHRGWSSRDSQP Trigger: AGGCTGCGAATCCCTACTGGACCAACCGCGGTGGCTCAGTGTCCATGTCTGGAGGTCGTTTCCGTTGCCCCTCGTGCCGCCATGAAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS CCA 90 bp | GGCAACGGAAACGACCTCCAGACATGGACACTGAGCCACCGCGGTTaGTCCAGTAGGGATTCGCAGCCTGGAAGATGTCGTTGGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: GNGNDLQTWTLSHRG*SSRDSQPGRCRWHT Trigger: AGTGTGCCAACGACATCTTCCAGGCTGCGAATCCCTACTGGACCAACCGCGGTGGCTCAGTGTCCATGTCTGGAGGTCGTTTCCGTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS CCA 90 bp | TTGGCACTTGAGAGGAAGGTAGCCCCTCCGGGCTCATCCAGGGACTaGATGGCGGTCTCCACAAGTTTGGTGGACTTTTCCAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LALERKVAPPGSSRD*MAVSTSLVDFSSCS Trigger: GGAGCAGCTGGAAAAGTCCACCAAACTTGTGGAGACCGCCATCCAGTCCCTGGATGAGCCCGGAGGGGCTACCTTCCTCTCAAGTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS CCA 90 bp | GCGGTCTCCACAAGTTTGGTGGACTTTTCCAGCTGCTCCCTGTACTaGAGGATCAGAGCCTCGATGAAGCCCAGCTTCTCCTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVSTSLVDFSSCSLY*RIRASMKPSFSSCS Trigger: GGAGCAGGAGGAGAAGCTGGGCTTCATCGAGGCTCTGATCCTCCAGTACAGGGAGCAGCTGGAAAAGTCCACCAAACTTGTGGAGACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTCCAGAGTGCTGGGATCAAAGGGTGTGTGCCCCAAGGCCCAGCCCCTTCTCAGTCTTCTGTCCTaGGAAGATGCTTTGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SASRVLGSKGVCPKAQPLLSLLS*EDALQR Trigger: CCTTTGCAAAGCATCTTCCAAGGACAGAAGACTGAG...AAGGGGCTGGGCCTTGGGGCACACACCCTTTGATCCCAGCACTCTGGAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CAA 90 bp | ACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGTACCGGCAGAGGTTGTGTaGGCAGGGCAGGATGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TTYNTNSVLSPCLGMGTVPAEVV*AGQDDH Trigger: GTGGTCATCCTGCCCTGCCAACACAACCTCTGCCGG...TACAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTGTGACAATCGCCAGTCACACAATGACCAGGCGTGATCATACAAAAGTTCCCAGCTGGCAGCCCTaGGAGGCTTCTACAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HFVTIASHTMTRRDHTKVPSWQP*EASTML Trigger: GAGCATTGTAGAAGCCTCCAAGGGCTGCCAGCTGGG...AACTTTTGTATGATCACGCCTGGTCATTGTGTGACTGGCGATTGTCACAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CAA 90 bp | AAACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGATGGGCACTGCCCAGCTGGCAGCCCTaGGAGGCTTCTACAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQHITQIQSYPHVWGWALPSWQP*EASTML Trigger: GAGCATTGTAGAAGCCTCCAAGGGCTGCCAGCTGGG...CAGTGCCCATCCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTGCAAAACAACATATAACACAAATTCAGTCCTATCCCCATGTTTGGGGCTCAGTCTTCTGTCCTaGGAAGATGCTTTGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLCKTTYNTNSVLSPCLGLSLLS*EDALQR Trigger: CCTTTGCAAAGCATCTTCCAAGGACAGAAGACTGAG...CCCCAAACATGGGGATAGGACTGAATTTGTGTTATATGTTGTTTTGCACAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS-3UTR CAA 90 bp | AGTCACACAATGACCAGGCGTGATCATACAAAAGTTCTCGTACAAAAAGCACCAGCTTCTACAATGCTCTaGATGAGCTGCTTGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SHTMTRRDHTKVLVQKAPASTML*MSCLAL Trigger: AAGTGCCAAGCAGCTCATCAAGAGCATTGTAGAAGC...TGGTGCTTTTTGTACGAGAACTTTTGTATGATCACGCCTGGTCATTGTGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
||
| CDS CCA 72 bp | GGCGGCACGAGGGGCAACGGAAACGACCTCCAGACATaGACACTGAGCCACCGCGGTTGGTCCAGTAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GGTRGNGNDLQT*TLSHRGWSSRD Trigger: ATCCCTACTGGACCAACCGCGGTGGCTCAGTGTCCATGTCTGGAGGTCGTTTCCGTTGCCCCTCGTGCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CCA 72 bp | AGGCCGTACACCCCGTGCCGGTCCATGATCACTTCATaGCGGCACGAGGGGCAACGGAAACGACCTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: RPYTPCRSMITS*RHEGQRKRPPD Trigger: GTCTGGAGGTCGTTTCCGTTGCCCCTCGTGCCGCCATGAAGTGATCATGGACCGGCACGGGGTGTACGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS TCA 72 bp | CGAGGGGCAACGGAAACGACCTCCAGACATGGACACTaGGCCACCGCGGTTGGTCCAGTAGGGATTCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RGATETTSRHGH*ATAVGPVGIRS Trigger: GCTGCGAATCCCTACTGGACCAACCGCGGTGGCTCAGTGTCCATGTCTGGAGGTCGTTTCCGTTGCCCCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CAA 90 bp | AGCTGGCAGCCCTTGGAGGCTTCTACAATGCTCTTGATGAGCTGCTaGGCACTTGAGAGGAAGGTAGCCCCTCCGGGCTCATCCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SWQPLEASTMLLMSC*ALERKVAPPGSSRD Trigger: GTCCCTGGATGAGCCCGGAGGGGCTACCTTCCTCTCAAGTGCCAAGCAGCTCATCAAGAGCATTGTAGAAGCCTCCAAGGGCTGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS TCA 72 bp | CTATTCTCCTTGGTCACTCTGCAGGAGTCCTCCAGCTaGGAGATGATCGTCTGCACTCGGTCGTTGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LFSLVTLQESSS*EMIVCTRSLPA Trigger: GGCGGGCAACGACCGAGTGCAGACGATCATCTCTCAGCTGGAGGACTCCTGCAGAGTGACCAAGGAGAATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS GCA 72 bp | TTTTCTCGTCTTCGTGTTCCTTGCACATCGGGTGGCTaGCTTTCTGCAGGGGCCGACTGGAGCACTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FSRLRVPCTSGG*LSAGADWSTPA Trigger: AGCAGGAGTGCTCCAGTCGGCCCCTGCAGAAAGGCAGCCACCCGATGTGCAAGGAACACGAAGACGAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CCA 72 bp | AACGACCTCCAGACATGGACACTGAGCCACCGCGGTTaGTCCAGTAGGGATTCGCAGCCTGGAAGATGTCGT | + |
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Preference number: 6 (lower is better) Translates to: NDLQTWTLSHRG*SSRDSQPGRCR Trigger: ACGACATCTTCCAGGCTGCGAATCCCTACTGGACCAACCGCGGTGGCTCAGTGTCCATGTCTGGAGGTCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CAA 72 bp | CCCTTGGAGGCTTCTACAATGCTCTTGATGAGCTGCTaGGCACTTGAGAGGAAGGTAGCCCCTCCGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PLEASTMLLMSC*ALERKVAPPGS Trigger: TGAGCCCGGAGGGGCTACCTTCCTCTCAAGTGCCAAGCAGCTCATCAAGAGCATTGTAGAAGCCTCCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CAA 90 bp | CGCCACCAGCATGGAGATGCAGTTACTCAGCTCAGTCTTCTGTCCTaGGAAGATGCTTTGCAAAGGGGCAACCTCACAGGCCTGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RHQHGDAVTQLSLLS*EDALQRGNLTGLVS Trigger: GCTCACCAGGCCTGTGAGGTTGCCCCTTTGCAAAGCATCTTCCAAGGACAGAAGACTGAGCTGAGTAACTGCATCTCCATGCTGGTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CAA 72 bp | GTTACTCAGCTCAGTCTTCTGTCCTTGGAAGATGCTTaGCAAAGGGGCAACCTCACAGGCCTGGTGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VTQLSLLSLEDA*QRGNLTGLVSP Trigger: GGGGCTCACCAGGCCTGTGAGGTTGCCCCTTTGCAAAGCATCTTCCAAGGACAGAAGACTGAGCTGAGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS GCA 72 bp | ATGGCGGTCTCCACAAGTTTGGTGGACTTTTCCAGCTaGTCCCTGTACTGGAGGATCAGAGCCTCGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: MAVSTSLVDFSS*SLYWRIRASMK Trigger: CTTCATCGAGGCTCTGATCCTCCAGTACAGGGAGCAGCTGGAAAAGTCCACCAAACTTGTGGAGACCGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CCA 72 bp | CCTCCTCCTCCTCCTCCTCATCTGTCCCAAAGTCAATaGCCCTCAAGGCCTCTGCTATGTGTTCTAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PPPPPPHLSQSQ*PSRPLLCVLSP Trigger: TGGACTTAGAACACATAGCAGAGGCCTTGAGGGCCATTGACTTTGGGACAGATGAGGAGGAGGAGGAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS GCA 72 bp | TGCAGTTACTCAGCTCAGTCTTCTGTCCTTGGAAGATaGTTTGCAAAGGGGCAACCTCACAGGCCTGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: CSYSAQSSVLGR*FAKGQPHRPGE Trigger: CTCACCAGGCCTGTGAGGTTGCCCCTTTGCAAAGCATCTTCCAAGGACAGAAGACTGAGCTGAGTAACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CCA 72 bp | ATGGAGATGCAGTTACTCAGCTCAGTCTTCTGTCCTTaGAAGATGCTTTGCAAAGGGGCAACCTCACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: MEMQLLSSVFCP*KMLCKGATSQA Trigger: GGCCTGTGAGGTTGCCCCTTTGCAAAGCATCTTCCAAGGACAGAAGACTGAGCTGAGTAACTGCATCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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| CDS CAA 72 bp | CATGGAGATGCAGTTACTCAGCTCAGTCTTCTGTCCTaGGAAGATGCTTTGCAAAGGGGCAACCTCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: HGDAVTQLSLLS*EDALQRGNLTG Trigger: GCCTGTGAGGTTGCCCCTTTGCAAAGCATCTTCCAAGGACAGAAGACTGAGCTGAGTAACTGCATCTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030638.7 ENSMUST00000105875.8 |
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