Pregenerated sensors for TRIM6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072244Ensembl transcript IDs: ENSMUST00000098180.10, ENSMUST00000214578.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTACAGTACATTGGAGAGTACCAAAAGCCACGAGTAGCCCTTGTCTaGAGTGTCAGAAGTCCAGCTGCACCTCCCCCGACACTCATTTCC | + |
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Preference number: 1 (lower is better) Translates to: LQYIGEYQKPRVALV*SVRSPAAPPPTLIS Trigger: GGAAATGAGTGTCGGGGGAGGTGCAGCTGGACTTCTGACACTGCAGACAAGGGCTACTCGTGGCTTTTGGTACTCTCCAATGTACTGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR TCA 90 bp | ACAGGGAAAACTGCCTGTGGTGGCTTATGCCTTAACCCCAGCAGTTaGAAGGCTAAGGCAGGAAGCTACCACTACAATTTGATGGCGAGC | + |
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Preference number: 1 (lower is better) Translates to: TGKTACGGLCLNPSS*KAKAGSYHYNLMAS Trigger: GCTCGCCATCAAATTGTAGTGGTAGCTTCCTGCCTTAGCCTTTCAACTGCTGGGGTTAAGGCATAAGCCACCACAGGCAGTTTTCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR TCA 90 bp | ACACATGACAGTTTTGCTTCAGGAATCAGTGGTAAACGTAACAACTaGGACAACTCAGTGAGGCTGACCCAGGAGCAGAATAGAAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: THDSFASGISGKRNN*DNSVRLTQEQNRKD Trigger: ATCCTTTCTATTCTGCTCCTGGGTCAGCCTCACTGAGTTGTCTCAGTTGTTACGTTTACCACTGATTCCTGAAGCAAAACTGTCATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR TCA 90 bp | ACCCTATCTCAAACAACACTAAAACAAATTCACAGCCAGGTATGGTaGTGTCCACTTGTAATCGGGACTCTGGATCAGTTCTCAGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: TLSQTTLKQIHSQVW*CPLVIGTLDQFSVS Trigger: ACTAACTGAGAACTGATCCAGAGTCCCGATTACAAGTGGACATCACCATACCTGGCTGTGAATTTGTTTTAGTGTTGTTTGAGATAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR CCA 90 bp | TACATTGCTTTTATGGAAATTCAGTATTTCACTGTTACAGTACATTaGAGAGTACCAAAAGCCACGAGTAGCCCTTGTCTGCAGTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: YIAFMEIQYFTVTVH*RVPKATSSPCLQCQ Trigger: CTGACACTGCAGACAAGGGCTACTCGTGGCTTTTGGTACTCTCCAATGTACTGTAACAGTGAAATACTGAATTTCCATAAAAGCAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR-3UTR GCA 90 bp | AAGCCACGAGTAGCCCTTGTCTGCAGTGTCAGAAGTCCAGCTGCACCTCCCCCGGTGTTTGAAGGAATCTaGTTAGTTGTGGGCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: KPRVALVCSVRSPAAPPPVFEGI*LVVGRG Trigger: ACCCCTGCCCACAACTAAGCAGATTCCTTCAAACAC...CGGGGGAGGTGCAGCTGGACTTCTGACACTGCAGACAAGGGCTACTCGTGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR-3UTR GCA 90 bp | AAGCCACGAGTAGCCCTTGTCTGCAGTGTCAGAAGTCCAGCTGCACCTCCCCCGAGCGGTTCACTCATTTaGAATTTGAATATGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: KPRVALVCSVRSPAAPPPSGSLI*NLNMST Trigger: TGTGCTCATATTCAAATTGCAAATGAGTGAACCGCT...CGGGGGAGGTGCAGCTGGACTTCTGACACTGCAGACAAGGGCTACTCGTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAAAGCCGAGTTCAGTACCTAGCTCTACAGAAGAAATAAGAGGGGCTGGGGCTATAATCAGTATTTaGGAGCTCAGTCAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: SKKPSSVPSSTEEIRGAGAIISI*ELSQAL Trigger: CAGTGCCTGACTGAGCTCCCAAATACTGATTATAGC...CCCAGCCCCTCTTATTTCTTCTGTAGAGCTAGGTACTGAACTCGGCTTTTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR CAA 90 bp | AAAGTTTGTTGCACCTTTCCAGCAAAGCCAAAGCGGTTCACTCATTaGCAATTTGAATATGAGCACAAAGAGAAGGTCCAGGCTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: KVCCTFPAKPKRFTH*QFEYEHKEKVQAKM Trigger: CATCTTAGCCTGGACCTTCTCTTTGTGCTCATATTCAAATTGCAAATGAGTGAACCGCTTTGGCTTTGCTGGAAAGGTGCAACAAACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR-3UTR TCA 90 bp | AAACACCTAGTTACTCAGGATGCTGAGGCAAAGCTTAAAGTCAGCCTGCACTTGCAGAATAACTCACTGTaGGAATGGGTAACTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: KHLVTQDAEAKLKVSLHLQNNSL*EWVTEF Trigger: AAATTCAGTTACCCATTCTCACAGTGAGTTATTCTG...CAAGTGCAGGCTGACTTTAAGCTTTGCCTCAGCATCCTGAGTAACTAGGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR GCA 72 bp | ACGAGTAGCCCTTGTCTGCAGTGTCAGAAGTCCAGCTaGACCTCCCCCGACACTCATTTCCATCTTCACAGC | + |
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Preference number: 3 (lower is better) Translates to: TSSPCLQCQKSS*TSPDTHFHLHS Trigger: GCTGTGAAGATGGAAATGAGTGTCGGGGGAGGTGCAGCTGGACTTCTGACACTGCAGACAAGGGCTACTCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR GCA 72 bp | ATTGGAGAGTACCAAAAGCCACGAGTAGCCCTTGTCTaGAGTGTCAGAAGTCCAGCTGCACCTCCCCCGACA | + |
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Preference number: 3 (lower is better) Translates to: IGEYQKPRVALV*SVRSPAAPPPT Trigger: TGTCGGGGGAGGTGCAGCTGGACTTCTGACACTGCAGACAAGGGCTACTCGTGGCTTTTGGTACTCTCCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR TCA 72 bp | ACTGCCTGTGGTGGCTTATGCCTTAACCCCAGCAGTTaGAAGGCTAAGGCAGGAAGCTACCACTACAATTTG | + |
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Preference number: 3 (lower is better) Translates to: TACGGLCLNPSS*KAKAGSYHYNL Trigger: CAAATTGTAGTGGTAGCTTCCTGCCTTAGCCTTTCAACTGCTGGGGTTAAGGCATAAGCCACCACAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGCTGAGGCAAAGCTTAAAGTCAGCCTGCACTTGATAGCAAGCTCAAGGATCTATAATCAGTATTaGGGAGCTCAGTCAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: QDAEAKLKVSLHLIASSRIYNQY*GAQSGT Trigger: AGTGCCTGACTGAGCTCCCAAATACTGATTATAGAT...CCTTGAGCTTGCTATCAAGTGCAGGCTGACTTTAAGCTTTGCCTCAGCATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR GCA 72 bp | GCACCTTTCCAGCAAAGCCAAAGCGGTTCACTCATTTaGAATTTGAATATGAGCACAAAGAGAAGGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: APFQQSQSGSLI*NLNMSTKRRSR Trigger: CCTGGACCTTCTCTTTGTGCTCATATTCAAATTGCAAATGAGTGAACCGCTTTGGCTTTGCTGGAAAGGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR TCA 72 bp | ATCTATAATCAGTATTTGGGAGTGAGGCAAATGGACTaGGTCTGTGGCCAGTTTGGGCTATTTATGGAGACC | + |
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Preference number: 3 (lower is better) Translates to: IYNQYLGVRQMD*VCGQFGLFMET Trigger: GGTCTCCATAAATAGCCCAAACTGGCCACAGACTCAGTCCATTTGCCTCACTCCCAAATACTGATTATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR-3UTR CAA 90 bp | AGTAAAAAGCCGAGTTCAGTACCTAGCTCTACAGAAGAAATAAGAGGGGCTGGGATCTATAATCAGTATTaGGGAGTGAGGCAAATGGAC | + |
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Preference number: 3 (lower is better) Translates to: SKKPSSVPSSTEEIRGAGIYNQY*GVRQMD Trigger: GTCCATTTGCCTCACTCCCAAATACTGATTATAGAT...CCCAGCCCCTCTTATTTCTTCTGTAGAGCTAGGTACTGAACTCGGCTTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR TCA 72 bp | TCTATAATCAGTATTTGGGAGCTCAGTCAGGTGCTGTaGGGTAGAGCTATAATCAGTATTTGGGAGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SIISIWELSQVL*GRAIISIWELS Trigger: ACTGAGCTCCCAAATACTGATTATAGCTCTACCTCACAGCACCTGACTGAGCTCCCAAATACTGATTATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR TCA 72 bp | TCTATAATCAGTATTTGGGAGCTCAGTCAGGCACTGTaGGGTAGATCTATAATCAGTATTTGGGAGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SIISIWELSQAL*GRSIISIWELS Trigger: ACTGAGCTCCCAAATACTGATTATAGATCTACCTCACAGTGCCTGACTGAGCTCCCAAATACTGATTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR CCA 72 bp | TTTATGGAAATTCAGTATTTCACTGTTACAGTACATTaGAGAGTACCAAAAGCCACGAGTAGCCCTTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: FMEIQYFTVTVH*RVPKATSSPCL Trigger: CAGACAAGGGCTACTCGTGGCTTTTGGTACTCTCCAATGTACTGTAACAGTGAAATACTGAATTTCCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR CCA 90 bp | AAGCCACGAGTAGCCCTTGTCTGCAGTGTCAGAAGTCCAGCTGCACCTCCCCCGCCAGTATCCACACTGTaGCTGATACCTGGAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: KPRVALVCSVRSPAAPPPPVSTL*LIPGVG Trigger: GCCTACTCCAGGTATCAGCCACAGTGTGGATACTGG...CGGGGGAGGTGCAGCTGGACTTCTGACACTGCAGACAAGGGCTACTCGTGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | CAGGATGCTGAGGCAAAGCTTAAAGTCAGCCTGCACTTGATAGCAAGCTCAAGGGGGCCACCTCCTCCATaGGGAATGTGTGATGACCAC | + |
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Preference number: 4 (lower is better) Translates to: QDAEAKLKVSLHLIASSRGPPPP*GMCDDH Trigger: GTGGTCATCACACATTCCTCATGGAGGAGGTGGCCC...CCTTGAGCTTGCTATCAAGTGCAGGCTGACTTTAAGCTTTGCCTCAGCATCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | CAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTCCTGAGGAGAAGTGCTaGGAGCCCAGGACACTACAG | + |
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Preference number: 4 (lower is better) Translates to: QRMEIHVFEGICLVVGRGPEEKC*EPRTLQ Trigger: CTGTAGTGTCCTGGGCTCTCAGCACTTCTCCTCAGG...ACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | GAACAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGTTGGTGGGGAGAGCTTaGGGCTTCCTCAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EQRMEIHVFEGICLVVGRLVGRA*GFLRVQ Trigger: CTGGACCCTGAGGAAGCCCCAAGCTCTCCCCACCAA...CCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGATTGGTGGGGAGAGCTTaGGGCTTCCTCAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRLVGRA*GFLRVQ Trigger: CTGGACCCTGAGGAAGCCCCAAGCTCTCCCCACCAA...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| 3UTR CAA 72 bp | CAGGATGCTGAGGCAAAGCTTAAAGTCAGCCTGCACTaGATAGCAAGCTCAAGGCCAGCCTGGGAAATGTGT | + |
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Preference number: 4 (lower is better) Translates to: QDAEAKLKVSLH*IASSRPAWEMC Trigger: ACACATTTCCCAGGCTGGCCTTGAGCTTGCTATCAAGTGCAGGCTGACTTTAAGCTTTGCCTCAGCATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGAGGGCCACCTCCTCCATaGGGAATGTGTGATGACCAC | + |
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Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRGPPPP*GMCDDH Trigger: GTGGTCATCACACATTCCTCATGGAGGAGGTGGCCC...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR TCA 90 bp | AGTAAAAAGCCGAGTTCAGTACCTAGCTCTACAGAAGAAATAAGAGGGGCTGGGTTCTCAGGCTCCACCTaGCTCTTCCAGGATTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SKKPSSVPSSTEEIRGAGFSGST*LFQDSL Trigger: GAGGGAATCCTGGAAGAGTCAGGTGGAGCCTGAGAA...CCCAGCCCCTCTTATTTCTTCTGTAGAGCTAGGTACTGAACTCGGCTTTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | AAACACCTAGTTACTCAGGATGCTGAGGCAAAGCTTAAAGTCAGCCTGCACTTGCCTCGGCCTTTTCTATaGTGCTCAGCCCCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KHLVTQDAEAKLKVSLHLPRPFL*CSAPSS Trigger: AGAGGAAGGGGCTGAGCATCATAGAAAAGGCCGAGG...CAAGTGCAGGCTGACTTTAAGCTTTGCCTCAGCATCCTGAGTAACTAGGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | AGTAAAAAGCCGAGTTCAGTACCTAGCTCTACAGAAGAAATAAGAGGGGCTGGGGATGAGGTCCTTCAGTaGCTGGCTCTGGTGGATCAG | + |
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Preference number: 4 (lower is better) Translates to: SKKPSSVPSSTEEIRGAGDEVLQ*LALVDQ Trigger: CTGATCCACCAGAGCCAGTCACTGAAGGACCTCATC...CCCAGCCCCTCTTATTTCTTCTGTAGAGCTAGGTACTGAACTCGGCTTTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGACCTGAGGAGAAGTGCTaGGAGCCCAGGACACTACAG | + |
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Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRPEEKC*EPRTLQ Trigger: CTGTAGTGTCCTGGGCTCTCAGCACTTCTCCTCAGG...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR TCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGATCCCATCCTCCTCTCTaGGCCTCTTCACTATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRSHPPL*ASSLWR Trigger: CCGCCATAGTGAAGAGGCTCAGAGAGGAGGATGGGA...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | AAAACAAATTCACAGCCAGGTATGGTGATGTCCACTTGTAATCGGGACTCTGGAATGTCCTGGTACTCCTaGGCCACCTCCTCCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: KTNSQPGMVMSTCNRDSGMSWYS*ATSSMR Trigger: CCTCATGGAGGAGGTGGCCCAGGAGTACCAGGACAT...TCCAGAGTCCCGATTACAAGTGGACATCACCATACCTGGCTGTGAATTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR CCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACATGTCCTGGTACTCCTaGGCCACCTCCTCCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNMSWYS*ATSSMR Trigger: CCTCATGGAGGAGGTGGCCCAGGAGTACCAGGACAT...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | GCGGATCTCTCCAAGTTTAAGGCCAGTTTGACCTACAGAGTTCCAGAAACCCTAAACTTTTCAGCTTGGTaGGGAGAGCTTGGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ADLSKFKASLTYRVPETLNFSAW*GELGAS Trigger: GGAAGCCCCAAGCTCTCCCCACCAAGCTGAAAAGTT...TAGGGTTTCTGGAACTCTGTAGGTCAAACTGGCCTTAAACTTGGAGAGATCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACACAACGCAACCTCTCTaGGCCTCTTCACTATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNTTQPL*ASSLWR Trigger: CCGCCATAGTGAAGAGGCTCAGAGAGGTTGCGTTGT...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGATTCTCAGGCTCCACCTaGCTCTTCCAGGATTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRFSGST*LFQDSL Trigger: GAGGGAATCCTGGAAGAGTCAGGTGGAGCCTGAGAA...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR TCA 90 bp | GAACAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGCCTCGGCCTTTTCTATaGTGCTCAGCCCCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: EQRMEIHVFEGICLVVGRPRPFL*CSAPSS Trigger: AGAGGAAGGGGCTGAGCATCATAGAAAAGGCCGAGG...CCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR TCA 90 bp | GAACAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGATGAGGTCCTTCAGTaGCTGGCTCTGGTGGATCAG | + |
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Preference number: 4 (lower is better) Translates to: EQRMEIHVFEGICLVVGRDEVLQ*LALVDQ Trigger: CTGATCCACCAGAGCCAGTCACTGAAGGACCTCATC...CCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR TCA 90 bp | AATTCACAGCCAGGTATGGTGATGTCCACTTGTAATCGGGACTCTGGATCAGTTCCAGTAGTATTTTCCTaGGGAGAAGTGCTGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: NSQPGMVMSTCNRDSGSVPVVFS*GEVLRA Trigger: GGCTCTCAGCACTTCTCCTCAGGAAAATACTACTGG...AACTGATCCAGAGTCCCGATTACAAGTGGACATCACCATACCTGGCTGTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | CAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTCCAGTAGTATTTTCCTaGGGAGAAGTGCTGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: QRMEIHVFEGICLVVGRGPVVFS*GEVLRA Trigger: GGCTCTCAGCACTTCTCCTCAGGAAAATACTACTGG...ACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR GCA 90 bp | AATTCACAGCCAGGTATGGTGATGTCCACTTGTAATCGGGACTCTGGATCAGTTTTCTCGGCTTCCTGCTaGTCCCTCCTCAATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NSQPGMVMSTCNRDSGSVFSASC*SLLNFF Trigger: GAAGAAATTGAGGAGGGAGCAGCAGGAAGCCGAGAA...AACTGATCCAGAGTCCCGATTACAAGTGGACATCACCATACCTGGCTGTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR GCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGCTTCTCGGCTTCCTaGTGCTCCCTCCTCAATTTC | + |
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Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNSFSAS*CSLLNF Trigger: GAAATTGAGGAGGGAGCAGCAGGAAGCCGAGAAGCT...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR GCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACACATCACCCACATCCTaGAGCAGTTCTACGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNTSPTS*SSSTVD Trigger: GTCCACCGTAGAACTGCTGCAGGATGTGGGTGATGT...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR GCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACTCCATGCCGTCTTCTTaGTCACGTCCACTTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNSMPSS*SRPLPS Trigger: ACTGGGAAGTGGACGTGAGCAAGAAGACGGCATGGA...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR GCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGATCCATGCCGTCTTCTTaGTCACGTCCACTTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRSMPSS*SRPLPS Trigger: ACTGGGAAGTGGACGTGAGCAAGAAGACGGCATGGA...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | CAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTTGCTTAAACTCTGTCTaGATCCGGCGTTTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRMEIHVFEGICLVVGRGCLNSV*IRRFSG Trigger: GCCTGAGAAACGCCGGATCCAGACAGAGTTTAAGCA...ACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | GAACAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGAGGTCCTTCAGTGACTaGCTCTGGTGGATCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQRMEIHVFEGICLVVGRRSFSD*LWWIRS Trigger: TGACCTGATCCACCAGAGCCAGTCACTGAAGGACCT...CCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGAAACTTTTCAGCTTGGTaGGGAGAGCTTGGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRNFSAW*GELGAS Trigger: GGAAGCCCCAAGCTCTCCCCACCAAGCTGAAAAGTT...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | GCGGATCTCTCCAAGTTTAAGGCCAGTTTGACCTACAGAGTTCCAGAAACCCTATGCTTGCTGGAGTACTaGCTGAAAGAGAACATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ADLSKFKASLTYRVPETLCLLEY*LKENMG Trigger: TCCCATGTTCTCTTTCAGCCAGTACTCCAGCAAGCA...TAGGGTTTCTGGAACTCTGTAGGTCAAACTGGCCTTAAACTTGGAGAGATCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR CCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGACCAGTATCCACACTGTaGCTGATACCTGGAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRPVSTL*LIPGVG Trigger: GCCTACTCCAGGTATCAGCCACAGTGTGGATACTGG...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR TCA 90 bp | AATTCACAGCCAGGTATGGTGATGTCCACTTGTAATCGGGACTCTGGATCAGTTGCAAGCCGTGGTTTGTaGCATTATAAAAGGAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: NSQPGMVMSTCNRDSGSVASRGL*HYKRRP Trigger: CGGTCTCCTTTTATAATGTCACAAACCACGGCTTGC...AACTGATCCAGAGTCCCGATTACAAGTGGACATCACCATACCTGGCTGTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | CAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTGCAAGCCGTGGTTTGTaGCATTATAAAAGGAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: QRMEIHVFEGICLVVGRGASRGL*HYKRRP Trigger: CGGTCTCCTTTTATAATGTCACAAACCACGGCTTGC...ACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR GCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACTTCTCGGCTTCCTGCTaGTCCCTCCTCAATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNFSASC*SLLNFF Trigger: GAAGAAATTGAGGAGGGAGCAGCAGGAAGCCGAGAA...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR GCA 90 bp | AGTAAAAAGCCGAGTTCAGTACCTAGCTCTACAGAAGAAATAAGAGGGGCTGGGAGGATGCTTCGGAGCTaGTTAAACTCTGTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SKKPSSVPSSTEEIRGAGRMLRS*LNSVWI Trigger: GATCCAGACAGAGTTTAAGCAGCTCCGAAGCATCCT...CCCAGCCCCTCTTATTTCTTCTGTAGAGCTAGGTACTGAACTCGGCTTTTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR GCA 90 bp | CAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAGGATGCTTCGGAGCTaGTTAAACTCTGTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QRMEIHVFEGICLVVGRGRMLRS*LNSVWI Trigger: GATCCAGACAGAGTTTAAGCAGCTCCGAAGCATCCT...ACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | TTCCTAGTACCCACATTTAAAACATACAGGGAAAACTGCCTGTGGTGGCTTATGAGGTCCTTCAGTGACTaGCTCTGGTGGATCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLVPTFKTYRENCLWWLMRSFSD*LWWIRS Trigger: TGACCTGATCCACCAGAGCCAGTCACTGAAGGACCT...CATAAGCCACCACAGGCAGTTTTCCCTGTATGTTTTAAATGTGGGTACTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | AGTAAAAAGCCGAGTTCAGTACCTAGCTCTACAGAAGAAATAAGAGGGGCTGGGTATTACTGTTTCCTATaGTGCAGACCTGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKKPSSVPSSTEEIRGAGYYCFL*CRPGRS Trigger: GCTTCTGCCAGGTCTGCATCATAGGAAACAGTAATA...CCCAGCCCCTCTTATTTCTTCTGTAGAGCTAGGTACTGAACTCGGCTTTTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR CCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACTGCTTGCTGGAGTACTaGCTGAAAGAGAACATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNCLLEY*LKENMG Trigger: TCCCATGTTCTCTTTCAGCCAGTACTCCAGCAAGCA...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| 3UTR CAA 72 bp | GAGAGGCAAGCGGATCTCTCCAAGTTTAAGGCCAGTTaGACCTACAGAGTTCCAGAAACCCTATCTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERQADLSKFKAS*TYRVPETLSLK Trigger: TTTTAGAGATAGGGTTTCTGGAACTCTGTAGGTCAAACTGGCCTTAAACTTGGAGAGATCCGCTTGCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGATATTACTGTTTCCTATaGTGCAGACCTGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRYYCFL*CRPGRS Trigger: GCTTCTGCCAGGTCTGCATCATAGGAAACAGTAATA...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR GCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACTATAAAAGGAGACCGTaGCAGCCTCACAGTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNYKRRP*QPHSLR Trigger: TCTTAGACTGTGAGGCTGGCACGGTCTCCTTTTATA...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CCA 90 bp | AGTAAAAAGCCGAGTTCAGTACCTAGCTCTACAGAAGAAATAAGAGGGGCTGGGGATTCCCTCTTCTCCTaGATAAGAGCTTTTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKKPSSVPSSTEEIRGAGDSLFS*IRAFSF Trigger: GAAGCTAAAAGCTCTTATCCAGGAGAAGAGGGAATC...CCCAGCCCCTCTTATTTCTTCTGTAGAGCTAGGTACTGAACTCGGCTTTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| 3UTR CAA 72 bp | TGCACCTTTCCAGCAAAGCCAAAGCGGTTCACTCATTaGCAATTTGAATATGAGCACAAAGAGAAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTFPAKPKRFTH*QFEYEHKEKVQ Trigger: CTGGACCTTCTCTTTGTGCTCATATTCAAATTGCAAATGAGTGAACCGCTTTGGCTTTGCTGGAAAGGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR GCA 90 bp | AAGTTTAAGGCCAGTTTGACCTACAGAGTTCCAGAAACCCTATCTCTAAAAATAACATCACCCACATCCTaGAGCAGTTCTACGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KFKASLTYRVPETLSLKITSPTS*SSSTVD Trigger: GTCCACCGTAGAACTGCTGCAGGATGTGGGTGATGT...TATTTTTAGAGATAGGGTTTCTGGAACTCTGTAGGTCAAACTGGCCTTAAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR CCA 90 bp | GAACAGAGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGATTCCCTCTTCTCCTaGATAAGAGCTTTTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQRMEIHVFEGICLVVGRDSLFS*IRAFSF Trigger: GAAGCTAAAAGCTCTTATCCAGGAGAAGAGGGAATC...CCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| 3UTR CAA 72 bp | TTCCAGCAAAGCCAAAGCGGTTCACTCATTTGCAATTaGAATATGAGCACAAAGAGAAGGTCCAGGCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FQQSQSGSLICN*NMSTKRRSRLR Trigger: TCTTAGCCTGGACCTTCTCTTTGTGCTCATATTCAAATTGCAAATGAGTGAACCGCTTTGGCTTTGCTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR TCA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACTCCTTGGCCGAACACTaGATTATTACTGTTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RMEIHVFEGICLVVGRGNSLAEH*IITVSY Trigger: ATAGGAAACAGTAATAATTCAGTGTTCGGCCAAGGA...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR TCA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGATCCTTGGCCGAACACTaGATTATTACTGTTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: MEIHVFEGICLVVGRGNRSLAEH*IITVSY Trigger: ATAGGAAACAGTAATAATTCAGTGTTCGGCCAAGGA...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR GCA 90 bp | AAGTTTAAGGCCAGTTTGACCTACAGAGTTCCAGAAACCCTATCTCTAAAAATATATAAAAGGAGACCGTaGCAGCCTCACAGTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFKASLTYRVPETLSLKIYKRRP*QPHSLR Trigger: TCTTAGACTGTGAGGCTGGCACGGTCTCCTTTTATA...TATTTTTAGAGATAGGGTTTCTGGAACTCTGTAGGTCAAACTGGCCTTAAACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS CCA 90 bp | CACCGGTGCTCCAGGTCTGAGATGAGGTCCTTCAGTGACTGGCTCTaGTGGATCAGGTCACCCTCGGCCTTTTCTATGATGCTCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HRCSRSEMRSFSDWL*WIRSPSAFSMMLSP Trigger: GGGGCTGAGCATCATAGAAAAGGCCGAGGGTGACCTGATCCACCAGAGCCAGTCACTGAAGGACCTCATCTCAGACCTGGAGCACCGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 90 bp | CGGTGCTCCAGGTCTGAGATGAGGTCCTTCAGTGACTGGCTCTGGTaGATCAGGTCACCCTCGGCCTTTTCTATGATGCTCAGCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCSRSEMRSFSDWLW*IRSPSAFSMMLSPF Trigger: GAAGGGGCTGAGCATCATAGAAAAGGCCGAGGGTGACCTGATCCACCAGAGCCAGTCACTGAAGGACCTCATCTCAGACCTGGAGCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS GCA 90 bp | CTCAGGGTCCAGAACTCACTCCTTTTTGTAACATCACCCACATCCTaGAGCAGTTCTACGGTGGACCCCTGGCACCGGTGCTCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRVQNSLLFVTSPTS*SSSTVDPWHRCSRS Trigger: AGACCTGGAGCACCGGTGCCAGGGGTCCACCGTAGAACTGCTGCAGGATGTGGGTGATGTTACAAAAAGGAGTGAGTTCTGGACCCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 90 bp | AGTGCTGAGAGCCCAGGACACTACAGTCATAATGTTCTTCCAGACTaGATGGCTCGGACAGCTGGGCACCCACAAACCTCACCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAESPGHYSHNVLPD*MARTAGHPQTSPVS Trigger: GGAGACAGGTGAGGTTTGTGGGTGCCCAGCTGTCCGAGCCATCCAGTCTGGAAGAACATTATGACTGTAGTGTCCTGGGCTCTCAGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 90 bp | GTACTCGTGCTTACACTGCAAGCCAATCACCCAGTATCCACACTGTaGCTGATACCTGGAGTAGGCGCCCTGCTTGCTGGAGTACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLVLTLQANHPVSTL*LIPGVGALLAGVLA Trigger: AGCCAGTACTCCAGCAAGCAGGGCGCCTACTCCAGGTATCAGCCACAGTGTGGATACTGGGTGATTGGCTTGCAGTGTAAGCACGAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 90 bp | CCTCACAGTCTAAGAAAATCCCTATGCGTCGAGGTGGCACGGTCATaGAGAGGAGCAGGGACGGGGAGGAATCCTCATAGGCTCTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: PHSLRKSLCVEVARS*RGAGTGRNPHRLCT Trigger: AGTACAGAGCCTATGAGGATTCCTCCCCGTCCCTGCTCCTCTCCATGACCGTGCCACCTCGACGCATAGGGATTTTCTTAGACTGTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 90 bp | CTGAGAGCCCAGGACACTACAGTCATAATGTTCTTCCAGACTGGATaGCTCGGACAGCTGGGCACCCACAAACCTCACCTGTCTCCGATT | + |
|
Preference number: 5 (lower is better) Translates to: LRAQDTTVIMFFQTG*LGQLGTHKPHLSPI Trigger: AATCGGAGACAGGTGAGGTTTGTGGGTGCCCAGCTGTCCGAGCCATCCAGTCTGGAAGAACATTATGACTGTAGTGTCCTGGGCTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 90 bp | GCATCTTCCTCAGATCCGGTGCTCGAAACAAACTTTTCAGCTTGGTaGGGAGAGCTTGGGGCTTCCTCAGGGTCCAGAACTCACTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASSSDPVLETNFSAW*GELGASSGSRTHSF Trigger: AAAGGAGTGAGTTCTGGACCCTGAGGAAGCCCCAAGCTCTCCCCACCAAGCTGAAAAGTTTGTTTCGAGCACCGGATCTGAGGAAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CAA 90 bp | AGTAAAAAGCCGAGTTCAGTACCTAGCTCTACAGAAGAAATAAGAGGGGCTGGGATCCATGCCGTCTTCTaGCTCACGTCCACTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKKPSSVPSSTEEIRGAGIHAVF*LTSTSQ Trigger: CTGGGAAGTGGACGTGAGCAAGAAGACGGCATGGAT...CCCAGCCCCTCTTATTTCTTCTGTAGAGCTAGGTACTGAACTCGGCTTTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS-3UTR CAA 90 bp | AGAATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACATCCATGCCGTCTTCTaGCTCACGTCCACTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RMEIHVFEGICLVVGRGNIHAVF*LTSTSQ Trigger: CTGGGAAGTGGACGTGAGCAAGAAGACGGCATGGAT...GTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS-3UTR CAA 90 bp | ATGGAGATTCATGTGTTTGAAGGAATCTGCTTAGTTGTGGGCAGGGGTAACAGAAACTTCCCATCCTCCTaGCAAAAGAGCTGGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MEIHVFEGICLVVGRGNRNFPSS*QKSWSF Trigger: GAAACTCCAGCTCTTTTGCAAGGAGGATGGGAAGTT...TCTGTTACCCCTGCCCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098180.10 |
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| CDS TCA 72 bp | CGGTGGACCCCTGGCACCGGTGCTCCAGGTCTGAGATaGGGTCCTTCAGTGACTGGCTCTGGTGGATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RWTPGTGAPGLR*GPSVTGSGGSG Trigger: ACCTGATCCACCAGAGCCAGTCACTGAAGGACCTCATCTCAGACCTGGAGCACCGGTGCCAGGGGTCCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 72 bp | CGGTGCTCCAGGTCTGAGATGAGGTCCTTCAGTGACTaGCTCTGGTGGATCAGGTCACCCTCGGCCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RCSRSEMRSFSD*LWWIRSPSAFS Trigger: AGAAAAGGCCGAGGGTGACCTGATCCACCAGAGCCAGTCACTGAAGGACCTCATCTCAGACCTGGAGCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 72 bp | CTAAGAAAATCCCTATGCGTCGAGGTGGCACGGTCATaGAGAGGAGCAGGGACGGGGAGGAATCCTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRKSLCVEVARS*RGAGTGRNPHR Trigger: CCTATGAGGATTCCTCCCCGTCCCTGCTCCTCTCCATGACCGTGCCACCTCGACGCATAGGGATTTTCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS TCA 72 bp | GGCTCTGGTGGATCAGGTCACCCTCGGCCTTTTCTATaGTGCTCAGCCCCTTCCTCTCTTCCACTTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GSGGSGHPRPFL*CSAPSSLPLPV Trigger: AACTGGAAGTGGAAGAGAGGAAGGGGCTGAGCATCATAGAAAAGGCCGAGGGTGACCTGATCCACCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
||
| CDS CCA 72 bp | TCCAGGTCTGAGATGAGGTCCTTCAGTGACTGGCTCTaGTGGATCAGGTCACCCTCGGCCTTTTCTATGATG | + |
|
Preference number: 6 (lower is better) Translates to: SRSEMRSFSDWL*WIRSPSAFSMM Trigger: CATCATAGAAAAGGCCGAGGGTGACCTGATCCACCAGAGCCAGTCACTGAAGGACCTCATCTCAGACCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 72 bp | TCAGATCCGGTGCTCGAAACAAACTTTTCAGCTTGGTaGGGAGAGCTTGGGGCTTCCTCAGGGTCCAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: SDPVLETNFSAW*GELGASSGSRT Trigger: AGTTCTGGACCCTGAGGAAGCCCCAAGCTCTCCCCACCAAGCTGAAAAGTTTGTTTCGAGCACCGGATCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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| CDS CCA 72 bp | CAGGACACTACAGTCATAATGTTCTTCCAGACTGGATaGCTCGGACAGCTGGGCACCCACAAACCTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: QDTTVIMFFQTG*LGQLGTHKPHL Trigger: CAGGTGAGGTTTGTGGGTGCCCAGCTGTCCGAGCCATCCAGTCTGGAAGAACATTATGACTGTAGTGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
||
| CDS CCA 72 bp | AGCCCAGGACACTACAGTCATAATGTTCTTCCAGACTaGATGGCTCGGACAGCTGGGCACCCACAAACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SPGHYSHNVLPD*MARTAGHPQTS Trigger: TGAGGTTTGTGGGTGCCCAGCTGTCCGAGCCATCCAGTCTGGAAGAACATTATGACTGTAGTGTCCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
||
| CDS CCA 72 bp | GCTCGAAACAAACTTTTCAGCTTGGTGGGGAGAGCTTaGGGCTTCCTCAGGGTCCAGAACTCACTCCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ARNKLFSLVGRA*GFLRVQNSLLF Trigger: AAAAAGGAGTGAGTTCTGGACCCTGAGGAAGCCCCAAGCTCTCCCCACCAAGCTGAAAAGTTTGTTTCGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
||
| CDS GCA 72 bp | TCCTGGATAAGAGCTTTTAGCTTCTCGGCTTCCTGCTaGTCCCTCCTCAATTTCTTCAGAGACTCCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SWIRAFSFSASC*SLLNFFRDSWN Trigger: GTTCCAGGAGTCTCTGAAGAAATTGAGGAGGGAGCAGCAGGAAGCCGAGAAGCTAAAAGCTCTTATCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098180.10 ENSMUST00000214578.2 |
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