Pregenerated sensors for TRIM58 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037124Ensembl transcript IDs: ENSMUST00000075084.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGAGGGAGGGAGAGAGAGGGAGAGGGAGGGAGAGAGAATGAAATaGAATTTACTAGAAAAAGGTTATTTTGAAGCATCCTTATTTCTA | + |
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Preference number: 1 (lower is better) Translates to: GEGGREREREGERMK*NLLEKGYFEASLFL Trigger: TAGAAATAAGGATGCTTCAAAATAACCTTTTTCTAGTAAATTCCATTTCATTCTCTCTCCCTCCCTCTCCCTCTCTCTCCCTCCCTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR-3UTR TCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCATCCAGGACTTCCCTaGAGCACAGCACTTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: CTQETELLGVIGITLATCHPGLP*STALLD Trigger: ATCCAGAAGTGCTGTGCTTCAGGGAAGTCCTGGATG...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR-3UTR CCA 90 bp | CACACCTGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTCTAAATCTCTCTGTATaGAGGGTTGAGGGTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: HTCTQETELLGVIGITLALNLSV*RVEGAR Trigger: TCTTGCACCCTCAACCCTCCATACAGAGAGATTTAG...AGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCAGGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR-3UTR TCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCTCTGTATGGAGGGTTaGGGGTGCAAGAATAACATT | + |
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Preference number: 2 (lower is better) Translates to: CTQETELLGVIGITLATCLCMEG*GCKNNI Trigger: AATGTTATTCTTGCACCCTCAACCCTCCATACAGAG...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCAGAAACAACTGCAGAATAGGCGTTaGTGTGGTTTAGGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ETELLGVIGITLATCQKQLQNRR*CGLGKQ Trigger: CTGCTTCCCTAAACCACACCAACGCCTATTCTGCAG...TTGTTTCTGACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR CAA 90 bp | ACCTGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTaGGCTACTTGTCAGAAACAAGTAGAATTAATAATCCTAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: TCTQETELLGVIGIT*ATCQKQVELIILNL Trigger: GAGATTTAGGATTATTAATTCTACTTGTTTCTGACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR CCA 72 bp | GAGAATCCCTCCTGTGCAGGCCTGCAGAATAGGCGTTaGTGTGGTTTAGGGAAGCAGGGCACAGCCACGCCT | + |
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Preference number: 3 (lower is better) Translates to: ENPSCAGLQNRR*CGLGKQGTATP Trigger: AGGCGTGGCTGTGCCCTGCTTCCCTAAACCACACCAACGCCTATTCTGCAGGCCTGCACAGGAGGGATTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR TCA 72 bp | GCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTaGGTTATTGGGGGTTATTGGGATAACCTTGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: AKLCGTHLHPGD*VIGGYWDNLGY Trigger: GTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR GCA 72 bp | ATCCTTATTTCTAAGCTAAGCTTTGTGGCACACACCTaGACCCAGGAGACTGAGTTATTGGGGGTTATTGGG | + |
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Preference number: 3 (lower is better) Translates to: ILISKLSFVAHT*TQETELLGVIG Trigger: CCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGAAATAAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR-3UTR CAA 90 bp | CTTATTTCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTAGATAACCTTGGCTACTaGTCAGAAACAAGTAGAATT | + |
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Preference number: 3 (lower is better) Translates to: LISKLSFVAHTCTQETELDNLGY*SETSRI Trigger: AATTCTACTTGTTTCTGACAAGTAGCCAAGGTTATC...TAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGAAATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAAGGTGCCCAGCCCCAGCTaGCGCACGCTGTCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGKQGTATPPDPSRTSLKVPSPS*RTLSTR Trigger: CCTGGTGGACAGCGTGCGGCAGCTGGGGCTGGGCAC...CTTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | TTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAAGCCTGGGGCTGGCCGCTaGCTCCTCTCCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LGKQGTATPPDPSRTSLKPGAGR*LLSSSS Trigger: GGAGCTGGAGGAGAGGAGCCAGCGGCCAGCCCCAGG...CTTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAAGCCCTCATCCCAGGGATaGGGCACACAGTCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LGKQGTATPPDPSRTSLKPSSQG*GTQSSG Trigger: ACCTGAAGACTGTGTGCCGCATCCCTGGGATGAGGG...CTTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TTTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAACCAGAAGAGAAGCCCTaGAGGCCCAGGATGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: FREAGHSHASRSIQDFPEPEEKP*RPRMQG Trigger: GCCTTGCATCCTGGGCCTGCAGGGCTTCTCTTCTGG...TTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATTGGGGCGGCTGGCAGCCTCCTaGAGCGTCTCTGTGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SKLSFVAHTCTQETELLGRLAAS*SVSVRW Trigger: CCACCGCACAGAGACGCTGCAGGAGGCTGCCAGCCG...CCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAAGCAAAGCGCTCAGGGTTaGTGGGAACATCCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGKQGTATPPDPSRTSLKQSAQG*WEHPSR Trigger: TCTGGAGGGATGTTCCCAGCAACCCTGAGCGCTTTG...CTTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | CTTATTTCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTACAGCAGCCCTGGGGCTaGCCGCTGGCTCCTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LISKLSFVAHTCTQETELQQPWG*PLAPLL Trigger: GAGGAGAGGAGCCAGCGGCCAGCCCCAGGGCTGCTG...TAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGAAATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR TCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTGGCCGCAGTCCACGCTaGTGGGCTCCTGCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: CTQETELLGVIGITLATCGRSPR*WAPAGS Trigger: ACTTCCTGCAGGAGCCCATCAGCGTGGACTGCGGCC...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR TCA 90 bp | TTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAAGTCTCAAACTCCAGCCTaGAACGTTGTCTCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LGKQGTATPPDPSRTSLKSQTPA*NVVSAS Trigger: AGATGCAGAGACAACGTTTCAGGCTGGAGTTTGAGA...CTTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | CACACCTGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTCCCACGTTGGCCTCCTaGGTCAGAGCCTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: HTCTQETELLGVIGITLAPTLAS*VRASSI Trigger: AATGGAGGAGGCTCTGACCCAGGAGGCCAACGTGGG...AGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCAGGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | TCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATTGGGGCGAGGTCGCTCATCTTaGAGCACAGGCACCGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SKLSFVAHTCTQETELLGRGRSS*STGTEG Trigger: TCCCTCGGTGCCTGTGCTCCAAGATGAGCGACCTCG...CCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTTCCTCTGGTAGCGGCTaGCAGCCTCCTGCAGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: CTQETELLGVIGITLATCSSGSG*QPPAAS Trigger: AGACGCTGCAGGAGGCTGCCAGCCGCTACCAGAGGA...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | TCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATTGGGGAGCGCTCAGGGTTGCTaGGAACATCCCTCCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: SKLSFVAHTCTQETELLGSAQGC*EHPSRP Trigger: AGGTCTGGAGGGATGTTCCCAGCAACCCTGAGCGCT...CCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTACGCTGATGGGCTCCTaGAGGAAGTCCAGGCACACG | + |
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Preference number: 4 (lower is better) Translates to: CTQETELLGVIGITLATCTLMGS*RKSRHT Trigger: CGTGTGCCTGGACTTCCTGCAGGAGCCCATCAGCGT...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCCTGCAGGCCCAGGATaGAAGGCCAGGTGTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: CTQETELLGVIGITLATCPAGPG*KARCQS Trigger: GCTTTGACACCTGGCCTTGCATCCTGGGCCTGCAGG...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | TCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATTGGGGTCCTCTTCACAGAAGTaGCTCAGGTCCTCACCGTGC | + |
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Preference number: 4 (lower is better) Translates to: SKLSFVAHTCTQETELLGSSSQK*LRSSPC Trigger: GCACGGTGAGGACCTGAGCCACTTCTGTGAAGAGGA...CCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCTGTCACGCAGTCTCTaGAGGGTTGCTCTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: CTQETELLGVIGITLATCLSRSL*RVALSS Trigger: GGAGGAGAGAGCAACCCTGCAGAGACTGCGTGACAG...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | TCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATTGGGGCAGCACAGCATCGTCTaGTCCTCTTCACAGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SKLSFVAHTCTQETELLGQHSIV*SSSQKW Trigger: CCACTTCTGTGAAGAGGACCAGACGATGCTGTGCTG...CCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | GAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCAGAAACAACGCCTCAGCTGCAGCTaGTCCTCCTGGGCCAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: ETELLGVIGITLATCQKQRLSCS*SSWARN Trigger: GTTTCTGGCCCAGGAGGAGCAGCTGCAGCTGAGGCG...TTGTTTCTGACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | CTTATTTCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATGCAGCTGCTCCTCCTaGGCCAGAAACCCTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LISKLSFVAHTCTQETELCSCSS*ARNPLC Trigger: ACACAGAGGGTTTCTGGCCCAGGAGGAGCAGCTGCA...TAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGAAATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | CTTATTTCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTACCAGTTTCCAGGCGCTaGTTCTGTCATGGGAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LISKLSFVAHTCTQETELPVSRR*FCHGRQ Trigger: TTGCCTCCCATGACAGAAGCAGCGCCTGGAAACTGG...TAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGAAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR CAA 72 bp | TTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATaGGGGGTTATTGGGATAACCTTGGCTACTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: FVAHTCTQETEL*GVIGITLATCQ Trigger: CTGACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR GCA 90 bp | TCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATTGGGGCTGAAACGTTGTCTCTaGATCTCCACTTTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SKLSFVAHTCTQETELLGLKRCL*ISTFSF Trigger: GAAGGAGAAAGTGGAGATGCAGAGACAACGTTTCAG...CCCCAATAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | GAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCAGAAACAACGCAGACAGAAACTGTaGCCGCAGTCCACGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: ETELLGVIGITLATCQKQRRQKL*PQSTLM Trigger: CATCAGCGTGGACTGCGGCCACAGTTTCTGTCTGCG...TTGTTTCTGACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR TCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCGGAGAAGAGATGGTTaGATGTGTAGATGTAAGACC | + |
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Preference number: 4 (lower is better) Translates to: CTQETELLGVIGITLATCRRRDG*MCRCKT Trigger: GGTCTTACATCTACACATTCAACCATCTCTTCTCCG...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | GAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCAGAAACAACATAGGGACAGCCTCTaGTTCCAGCCTTGTGATAGC | + |
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Preference number: 4 (lower is better) Translates to: ETELLGVIGITLATCQKQHRDSL*FQPCDS Trigger: GCTATCACAAGGCTGGAACCAGAGGCTGTCCCTATG...TTGTTTCTGACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | GAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTCAGAAACAAAGCTTCACGTCGACTTaGAACTTCCTCAGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ETELLGVIGITLATCQKQSFTST*NFLSIS Trigger: GGAGATGCTGAGGAAGTTCCAAGTCGACGTGAAGCT...TTGTTTCTGACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CCA 90 bp | TGCACCCAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTTGGCTACTTGTAGTATTCCTCATTTCTaGCAGCAGCAGCAAGATCAA | + |
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Preference number: 4 (lower is better) Translates to: CTQETELLGVIGITLATCSIPHF*QQQQDQ Trigger: TTGATCTTGCTGCTGCTGCCAGAAATGAGGAATACT...ACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTGGGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| 3UTR CAA 72 bp | CAGGAGACTGAGTTATTGGGGGTTATTGGGATAACCTaGGCTACTTGTCAGAAACAAGTAGAATTAATAATC | + |
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Preference number: 4 (lower is better) Translates to: QETELLGVIGIT*ATCQKQVELII Trigger: GATTATTAATTCTACTTGTTTCTGACAAGTAGCCAAGGTTATCCCAATAACCCCCAATAACTCAGTCTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS TCA 90 bp | TCCTCTTCACAGAAGTGGCTCAGGTCCTCACCGTGCCTCGCACACTaGCGCGACCCCGCGTGTCCCGTGCCCAGCCCCAGCTGCCGCACG | + |
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Preference number: 5 (lower is better) Translates to: SSSQKWLRSSPCLAH*RDPACPVPSPSCRT Trigger: CGTGCGGCAGCTGGGGCTGGGCACGGGACACGCGGGGTCGCGTCAGTGTGCGAGGCACGGTGAGGACCTGAGCCACTTCTGTGAAGAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 90 bp | GGAGCATCCTCTGGTAGCGGCTGGCAGCCTCCTGCAGCGTCTCTGTaGGGTGGCTCCGGTGCTCAGGGCTGGTATCGCAGACCCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: GASSGSGWQPPAASL*GGSGAQGWYRRPST Trigger: TGTGCTGGGTCTGCGATACCAGCCCTGAGCACCGGAGCCACCGCACAGAGACGCTGCAGGAGGCTGCCAGCCGCTACCAGAGGATGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 90 bp | GTCAAGACTCCTCTCGCTCCCTCCAGCAGCCCTGGGGCTGGCCGCTaGCTCCTCTCCTCCAGCTCCTCAGCCAGTTCCTTCAGGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VKTPLAPSSSPGAGR*LLSSSSSASSFRAL Trigger: CAAGGCCCTGAAGGAACTGGCTGAGGAGCTGGAGGAGAGGAGCCAGCGGCCAGCCCCAGGGCTGCTGGAGGGAGCGAGAGGAGTCTTGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 90 bp | ACATCGTGTCAAGACTCCTCTCGCTCCCTCCAGCAGCCCTGGGGCTaGCCGCTGGCTCCTCTCCTCCAGCTCCTCAGCCAGTTCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: TSCQDSSRSLQQPWG*PLAPLLQLLSQFLQ Trigger: CTGAAGGAACTGGCTGAGGAGCTGGAGGAGAGGAGCCAGCGGCCAGCCCCAGGGCTGCTGGAGGGAGCGAGAGGAGTCTTGACACGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 90 bp | CAGCCTCCTGCAGCGTCTCTGTGCGGTGGCTCCGGTGCTCAGGGCTaGTATCGCAGACCCAGCACAGCATCGTCTGGTCCTCTTCACAGA | + |
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Preference number: 5 (lower is better) Translates to: QPPAASLCGGSGAQG*YRRPSTASSGPLHR Trigger: TCTGTGAAGAGGACCAGACGATGCTGTGCTGGGTCTGCGATACCAGCCCTGAGCACCGGAGCCACCGCACAGAGACGCTGCAGGAGGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 90 bp | CCTGCAGGCCCAGGATGCAAGGCCAGGTGTCAAAGCGCTCAGGGTTaGTGGGAACATCCCTCCAGACCTCCGCATCCTGTACACTGCGCA | + |
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Preference number: 5 (lower is better) Translates to: PAGPGCKARCQSAQG*WEHPSRPPHPVHCA Trigger: TGCGCAGTGTACAGGATGCGGAGGTCTGGAGGGATGTTCCCAGCAACCCTGAGCGCTTTGACACCTGGCCTTGCATCCTGGGCCTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 90 bp | CTCCGGTGCTCAGGGCTGGTATCGCAGACCCAGCACAGCATCGTCTaGTCCTCTTCACAGAAGTGGCTCAGGTCCTCACCGTGCCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: LRCSGLVSQTQHSIV*SSSQKWLRSSPCLA Trigger: TGCGAGGCACGGTGAGGACCTGAGCCACTTCTGTGAAGAGGACCAGACGATGCTGTGCTGGGTCTGCGATACCAGCCCTGAGCACCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 90 bp | TCTTCACAAGTTCCAAAGACGCTCGGAGCATCCTCTGGTAGCGGCTaGCAGCCTCCTGCAGCGTCTCTGTGCGGTGGCTCCGGTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SSQVPKTLGASSGSG*QPPAASLCGGSGAQ Trigger: CTGAGCACCGGAGCCACCGCACAGAGACGCTGCAGGAGGCTGCCAGCCGCTACCAGAGGATGCTCCGAGCGTCTTTGGAACTTGTGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 90 bp | CAGGGTTGCTGGGAACATCCCTCCAGACCTCCGCATCCTGTACACTaGGCAGGTCCGCAGTTAAGAGCAAGCTTGGGTGAGCAGTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: QGCWEHPSRPPHPVH*AGPQLRASLGEQWP Trigger: CGGCCACTGCTCACCCAAGCTTGCTCTTAACTGCGGACCTGCGCAGTGTACAGGATGCGGAGGTCTGGAGGGATGTTCCCAGCAACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CAA 90 bp | TTTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAAAGTTCCTTCAGGGCCTaGTTCTGTTGGGCCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: FREAGHSHASRSIQDFPESSFRA*FCWASL Trigger: CAGGCTGGCCCAACAGAACAAGGCCCTGAAGGAACT...TTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CAA 90 bp | TTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAAGCAGTTAAGAGCAAGCTaGGGTGAGCAGTGGCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: LGKQGTATPPDPSRTSLKQLRAS*GEQWPD Trigger: ATCCGGCCACTGCTCACCCAAGCTTGCTCTTAACTG...CTTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS TCA 90 bp | GCATCCTGTACACTGCGCAGGTCCGCAGTTAAGAGCAAGCTTGGGTaGGCAGTGGCCGGATCCAGCTTCACGTCGACTTGGAACTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: ASCTLRRSAVKSKLG*AVAGSSFTSTWNFL Trigger: GAGGAAGTTCCAAGTCGACGTGAAGCTGGATCCGGCCACTGCTCACCCAAGCTTGCTCTTAACTGCGGACCTGCGCAGTGTACAGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CAA 90 bp | TTAGGGAAGCAGGGCACAGCCACGCCTCCCGATCCATCCAGGACTTCCCTGAAGCAGCTTCACGTCGACTaGGAACTTCCTCAGCATCTC | + |
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Preference number: 5 (lower is better) Translates to: LGKQGTATPPDPSRTSLKQLHVD*ELPQHL Trigger: GAGATGCTGAGGAAGTTCCAAGTCGACGTGAAGCTG...CTTCAGGGAAGTCCTGGATGGATCGGGAGGCGTGGCTGTGCCCTGCTTCCCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 90 bp | CCCAGGGATGCGGCACACAGTCTTCAGGTCCATAGGGACAGCCTCTaGTTCCAGCCTTGTGATAGCCTCACATCGTGTCAAGACTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PRDAAHSLQVHRDSL*FQPCDSLTSCQDSS Trigger: AGAGGAGTCTTGACACGATGTGAGGCTATCACAAGGCTGGAACCAGAGGCTGTCCCTATGGACCTGAAGACTGTGTGCCGCATCCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 90 bp | GTACACTGCGCAGGTCCGCAGTTAAGAGCAAGCTTGGGTGAGCAGTaGCCGGATCCAGCTTCACGTCGACTTGGAACTTCCTCAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: VHCAGPQLRASLGEQ*PDPASRRLGTSSAS Trigger: AGATGCTGAGGAAGTTCCAAGTCGACGTGAAGCTGGATCCGGCCACTGCTCACCCAAGCTTGCTCTTAACTGCGGACCTGCGCAGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 90 bp | AGCAGCAAGATCAAAGATACCCCTGGGCGTCCAGTTTCCAGGCGCTaGTTCTGTCATGGGAGGCAAGATAAGAGGAGTCGTGTCGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SSKIKDTPGRPVSRR*FCHGRQDKRSRVAD Trigger: GTCTGCGACACGACTCCTCTTATCTTGCCTCCCATGACAGAAGCAGCGCCTGGAAACTGGACGCCCAGGGGTATCTTTGATCTTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 90 bp | AGTATTCCTCATTTCTGGCAGCAGCAGCAAGATCAAAGATACCCCTaGGCGTCCAGTTTCCAGGCGCTGCTTCTGTCATGGGAGGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: SIPHFWQQQQDQRYP*ASSFQALLLSWEAR Trigger: TCTTGCCTCCCATGACAGAAGCAGCGCCTGGAAACTGGACGCCCAGGGGTATCTTTGATCTTGCTGCTGCTGCCAGAAATGAGGAATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS-3UTR CAA 90 bp | CTTATTTCTAAGCTAAGCTTTGTGGCACACACCTGCACCCAGGAGACTGAGTTATCAAAGCGCTCAGGGTaGCTGGGAACATCCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LISKLSFVAHTCTQETELSKRSG*LGTSLQ Trigger: CTGGAGGGATGTTCCCAGCAACCCTGAGCGCTTTGA...TAACTCAGTCTCCTGGGTGCAGGTGTGTGCCACAAAGCTTAGCTTAGAAATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 72 bp | CCCAGCTGCCGCACGCTGTCCACCAGGCTGGCCAGCTaGCGGTTGGGTCTGAAGCTGGCGGGCCTGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PSCRTLSTRLAS*RLGLKLAGLKG Trigger: TCCCTTCAGGCCCGCCAGCTTCAGACCCAACCGGCAGCTGGCCAGCCTGGTGGACAGCGTGCGGCAGCTGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CAA 72 bp | TGCCGCACGCTGTCCACCAGGCTGGCCAGCTGCCGGTaGGGTCTGAAGCTGGCGGGCCTGAAGGGACCCCTG | + |
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Preference number: 6 (lower is better) Translates to: CRTLSTRLASCR*GLKLAGLKGPL Trigger: CAGGGGTCCCTTCAGGCCCGCCAGCTTCAGACCCAACCGGCAGCTGGCCAGCCTGGTGGACAGCGTGCGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 72 bp | GCAGCCTCCTGCAGCGTCTCTGTGCGGTGGCTCCGGTaGTCAGGGCTGGTATCGCAGACCCAGCACAGCATC | + |
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Preference number: 6 (lower is better) Translates to: AASCSVSVRWLR*SGLVSQTQHSI Trigger: GATGCTGTGCTGGGTCTGCGATACCAGCCCTGAGCACCGGAGCCACCGCACAGAGACGCTGCAGGAGGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | GCAGCGTCTCTGTGCGGTGGCTCCGGTGCTCAGGGCTaGTATCGCAGACCCAGCACAGCATCGTCTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AASLCGGSGAQG*YRRPSTASSGP Trigger: AGGACCAGACGATGCTGTGCTGGGTCTGCGATACCAGCCCTGAGCACCGGAGCCACCGCACAGAGACGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | GTTCCAAAGACGCTCGGAGCATCCTCTGGTAGCGGCTaGCAGCCTCCTGCAGCGTCTCTGTGCGGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VPKTLGASSGSG*QPPAASLCGGS Trigger: GGAGCCACCGCACAGAGACGCTGCAGGAGGCTGCCAGCCGCTACCAGAGGATGCTCCGAGCGTCTTTGGAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CAA 90 bp | CCCTGCAGGCCCAGGATGCAAGGCCAGGTGTCAAAGCGCTCAGGGTaGCTGGGAACATCCCTCCAGACCTCCGCATCCTGTACACTGCGC | + |
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Preference number: 6 (lower is better) Translates to: PCRPRMQGQVSKRSG*LGTSLQTSASCTLR Trigger: GCGCAGTGTACAGGATGCGGAGGTCTGGAGGGATGTTCCCAGCAACCCTGAGCGCTTTGACACCTGGCCTTGCATCCTGGGCCTGCAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 72 bp | CCTGAGCGCTGTCCGACTTCTCGCAGAACTCCGAGATaGACCGCAGACAGAAACTGTGGCCGCAGTCCACGC | + |
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Preference number: 6 (lower is better) Translates to: PERCPTSRRTPR*TADRNCGRSPR Trigger: GCGTGGACTGCGGCCACAGTTTCTGTCTGCGGTGCATCTCGGAGTTCTGCGAGAAGTCGGACAGCGCTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | TCGCAGAACTCCGAGATGCACCGCAGACAGAAACTGTaGCCGCAGTCCACGCTGATGGGCTCCTGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SQNSEMHRRQKL*PQSTLMGSCRK Trigger: CTTCCTGCAGGAGCCCATCAGCGTGGACTGCGGCCACAGTTTCTGTCTGCGGTGCATCTCGGAGTTCTGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CAA 72 bp | CCCAGGATGCAAGGCCAGGTGTCAAAGCGCTCAGGGTaGCTGGGAACATCCCTCCAGACCTCCGCATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PRMQGQVSKRSG*LGTSLQTSASC Trigger: ACAGGATGCGGAGGTCTGGAGGGATGTTCCCAGCAACCCTGAGCGCTTTGACACCTGGCCTTGCATCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS TCA 72 bp | ACACTGCGCAGGTCCGCAGTTAAGAGCAAGCTTGGGTaGGCAGTGGCCGGATCCAGCTTCACGTCGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: TLRRSAVKSKLG*AVAGSSFTSTW Trigger: CCAAGTCGACGTGAAGCTGGATCCGGCCACTGCTCACCCAAGCTTGCTCTTAACTGCGGACCTGCGCAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 72 bp | CCAGGATGCAAGGCCAGGTGTCAAAGCGCTCAGGGTTaGTGGGAACATCCCTCCAGACCTCCGCATCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: PGCKARCQSAQG*WEHPSRPPHPV Trigger: TACAGGATGCGGAGGTCTGGAGGGATGTTCCCAGCAACCCTGAGCGCTTTGACACCTGGCCTTGCATCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | TCAGGGCTGGTATCGCAGACCCAGCACAGCATCGTCTaGTCCTCTTCACAGAAGTGGCTCAGGTCCTCACCG | + |
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Preference number: 6 (lower is better) Translates to: SGLVSQTQHSIV*SSSQKWLRSSP Trigger: CGGTGAGGACCTGAGCCACTTCTGTGAAGAGGACCAGACGATGCTGTGCTGGGTCTGCGATACCAGCCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | GGATGCAAGGCCAGGTGTCAAAGCGCTCAGGGTTGCTaGGAACATCCCTCCAGACCTCCGCATCCTGTACAC | + |
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Preference number: 6 (lower is better) Translates to: GCKARCQSAQGC*EHPSRPPHPVH Trigger: GTGTACAGGATGCGGAGGTCTGGAGGGATGTTCCCAGCAACCCTGAGCGCTTTGACACCTGGCCTTGCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | TCCAAAAAGATCCCGATGCGGCGAGGTCGCTCATCTTaGAGCACAGGCACCGAGGGAGAGGACAGGACCATG | + |
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Preference number: 6 (lower is better) Translates to: SKKIPMRRGRSS*STGTEGEDRTM Trigger: CATGGTCCTGTCCTCTCCCTCGGTGCCTGTGCTCCAAGATGAGCGACCTCGCCGCATCGGGATCTTTTTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CAA 72 bp | CCTGTACACTGCGCAGGTCCGCAGTTAAGAGCAAGCTaGGGTGAGCAGTGGCCGGATCCAGCTTCACGTCGA | + |
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Preference number: 6 (lower is better) Translates to: PVHCAGPQLRAS*GEQWPDPASRR Trigger: TCGACGTGAAGCTGGATCCGGCCACTGCTCACCCAAGCTTGCTCTTAACTGCGGACCTGCGCAGTGTACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CAA 90 bp | CCTCCGCATCCTGTACACTGCGCAGGTCCGCAGTTAAGAGCAAGCTaGGGTGAGCAGTGGCCGGATCCAGCTTCACGTCGACTTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: PPHPVHCAGPQLRAS*GEQWPDPASRRLGT Trigger: AGTTCCAAGTCGACGTGAAGCTGGATCCGGCCACTGCTCACCCAAGCTTGCTCTTAACTGCGGACCTGCGCAGTGTACAGGATGCGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS GCA 72 bp | TGGGAACATCCCTCCAGACCTCCGCATCCTGTACACTaGGCAGGTCCGCAGTTAAGAGCAAGCTTGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: WEHPSRPPHPVH*AGPQLRASLGE Trigger: CTCACCCAAGCTTGCTCTTAACTGCGGACCTGCGCAGTGTACAGGATGCGGAGGTCTGGAGGGATGTTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | GCAGGTCCGCAGTTAAGAGCAAGCTTGGGTGAGCAGTaGCCGGATCCAGCTTCACGTCGACTTGGAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: AGPQLRASLGEQ*PDPASRRLGTS Trigger: GGAAGTTCCAAGTCGACGTGAAGCTGGATCCGGCCACTGCTCACCCAAGCTTGCTCTTAACTGCGGACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CAA 72 bp | TGGGTGAGCAGTGGCCGGATCCAGCTTCACGTCGACTaGGAACTTCCTCAGCATCTCCCTCATCCCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: WVSSGRIQLHVD*ELPQHLPHPRD Trigger: ATCCCTGGGATGAGGGAGATGCTGAGGAAGTTCCAAGTCGACGTGAAGCTGGATCCGGCCACTGCTCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | GCGGCACACAGTCTTCAGGTCCATAGGGACAGCCTCTaGTTCCAGCCTTGTGATAGCCTCACATCGTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: AAHSLQVHRDSL*FQPCDSLTSCQ Trigger: TTGACACGATGTGAGGCTATCACAAGGCTGGAACCAGAGGCTGTCCCTATGGACCTGAAGACTGTGTGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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| CDS CCA 72 bp | CATTTCTGGCAGCAGCAGCAAGATCAAAGATACCCCTaGGCGTCCAGTTTCCAGGCGCTGCTTCTGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: HFWQQQQDQRYP*ASSFQALLLSW Trigger: CCATGACAGAAGCAGCGCCTGGAAACTGGACGCCCAGGGGTATCTTTGATCTTGCTGCTGCTGCCAGAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075084.5 |
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