Pregenerated sensors for TRIM56 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043279Ensembl transcript IDs: ENSMUST00000054384.6, ENSMUST00000152207.2
Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTAGGCAGGGGCTCTACCACTGAGCCACGCCCCCACCCTCATTGGTaGATTCTAGACAAGCCCTCTACAGTGAGCCATGCCCAGACTCCT | + |
Preference number: 1 (lower is better) Translates to: LGRGSTTEPRPHPHW*ILDKPSTVSHAQTP Trigger: AGGAGTCTGGGCATGGCTCACTGTAGAGGGCTTGTCTAGAATGCACCAATGAGGGTGGGGGCGTGGCTCAGTGGTAGAGCCCCTGCCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | TGGCGTGTAGTCCATGCACTTGGTGAAACACTCAAGGACGGTCACTaGCGAGGCAACCCTGCCCTCTGGACAGGACCCACGAGTGTGGAT | + |
Preference number: 1 (lower is better) Translates to: WRVVHALGETLKDGH*RGNPALWTGPTSVD Trigger: ATCCACACTCGTGGGTCCTGTCCAGAGGGCAGGGTTGCCTCGGCAGTGACCGTCCTTGAGTGTTTCACCAAGTGCATGGACTACACGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | GTCACTGCCGAGGCAACCCTGCCCTCTGGACAGGACCCACGAGTGTaGATGCTGACACCTTTCAACCACCATCTGGAAGAGTTCGACTCC | + |
Preference number: 1 (lower is better) Translates to: VTAEATLPSGQDPRV*MLTPFNHHLEEFDS Trigger: GGAGTCGAACTCTTCCAGATGGTGGTTGAAAGGTGTCAGCATCCACACTCGTGGGTCCTGTCCAGAGGGCAGGGTTGCCTCGGCAGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | GAGTTTTATGCCTCCTCCCGCCTTAGGTCCCCCATCCATCACTGCTaGCTTCCCAGATTCTCCCATGCTGGCCTTTGGGCTTCAGCGCCT | + |
Preference number: 1 (lower is better) Translates to: EFYASSRLRSPIHHC*LPRFSHAGLWASAP Trigger: AGGCGCTGAAGCCCAAAGGCCAGCATGGGAGAATCTGGGAAGTCAGCAGTGATGGATGGGGGACCTAAGGCGGGAGGAGGCATAAAACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | CTCTTCAATTCCCACTTAGAGGACTGCTTCCACCTTCAACTTCCCTaGCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCA | + |
Preference number: 1 (lower is better) Translates to: LFNSHLEDCFHLQLP*QREMARHLGPCHPS Trigger: TGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGCAGGGAAGTTGAAGGTGGAAGCAGTCCTCTAAGTGGGAATTGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | CTTCCACCTTCAACTTCCCTGCCAAAGAGAGATGGCCAGGCACCTTaGCCCCTGCCACCCGTCAATCAAATTCCATCTAGCTCAGCTCGC | + |
Preference number: 1 (lower is better) Translates to: LPPSTSLPKRDGQAP*PLPPVNQIPSSSAR Trigger: GCGAGCTGAGCTAGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGCAGGGAAGTTGAAGGTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | CACATTACGCAATCAGAATCTGCCCGGTCAGTCTTTCCTTGTGCGTaGATGCATGAGTGCACGTGTGCGCACCTGCACAAGGTCCACAGG | + |
Preference number: 1 (lower is better) Translates to: HITQSESARSVFPCA*MHECTCAHLHKVHR Trigger: CCTGTGGACCTTGTGCAGGTGCGCACACGTGCACTCATGCATGCACGCACAAGGAAAGACTGACCGGGCAGATTCTGATTGCGTAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | AGTCACGCCCAAACAGTGCCATCGAGATCTCCAGCCTTCGTAGCCTaGAAGGATGTCAGGGAGTCCTTCAGACCCACTCTTATCATCAGC | + |
Preference number: 1 (lower is better) Translates to: SHAQTVPSRSPAFVA*KDVRESFRPTLIIS Trigger: GCTGATGATAAGAGTGGGTCTGAAGGACTCCCTGACATCCTTGCAGGCTACGAAGGCTGGAGATCTCGATGGCACTGTTTGGGCGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | CACGTGTGCGCACCTGCACAAGGTCCACAGGACACCAAGGGTCCATaGTGTTACTCTCCTATTACTTGGAGTCAGGGTCTCTCGATGAAC | + |
Preference number: 1 (lower is better) Translates to: HVCAPAQGPQDTKGP*CYSPITWSQGLSMN Trigger: GTTCATCGAGAGACCCTGACTCCAAGTAATAGGAGAGTAACAGCATGGACCCTTGGTGTCCTGTGGACCTTGTGCAGGTGCGCACACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | TACCTCCACTTCTGCTTGTGCCTGCACTCTCTGACCCCTGACCTCTaGCCCCATACTTCATTGAGGGAGTTTCTACTCCGATGGATTGGC | + |
Preference number: 1 (lower is better) Translates to: YLHFCLCLHSLTPDL*PHTSLREFLLRWIG Trigger: GCCAATCCATCGGAGTAGAAACTCCCTCAATGAAGTATGGGGTCAGAGGTCAGGGGTCAGAGAGTGCAGGCACAAGCAGAAGTGGAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | TCCTGCAGGCCCAGGAAGTCAGCAGGATATTCCTTTGCCATACGCTaGCATACCCTGTTCACCAACACTTCTGACCCTGTCTCCTGCAGA | + |
Preference number: 1 (lower is better) Translates to: SCRPRKSAGYSFAIR*HTLFTNTSDPVSCR Trigger: TCTGCAGGAGACAGGGTCAGAAGTGTTGGTGAACAGGGTATGTCAGCGTATGGCAAAGGAATATCCTGCTGACTTCCTGGGCCTGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | AGAACTATAAGGCTTCACAGCATAGGCACTTGGTCCCATGACAACTaGGAAGTGGGCAGGGCTGACCCTCAGGATCTCTCCTCAACCCAC | + |
Preference number: 1 (lower is better) Translates to: RTIRLHSIGTWSHDN*EVGRADPQDLSSTH Trigger: GTGGGTTGAGGAGAGATCCTGAGGGTCAGCCCTGCCCACTTCTCAGTTGTCATGGGACCAAGTGCCTATGCTGTGAAGCCTTATAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | CTTCTCAGGTCTGCACCTCCTCTCTTCAATTCCCACTTAGAGGACTaGTTCCACCTTCAACTTCCCTGCCAAAGAGAGATGGCCAGGCAC | + |
Preference number: 1 (lower is better) Translates to: LLRSAPPLFNSHLED*FHLQLPCQREMARH Trigger: GTGCCTGGCCATCTCTCTTTGGCAGGGAAGTTGAAGGTGGAAGCAGTCCTCTAAGTGGGAATTGAAGAGAGGAGGTGCAGACCTGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | GATCTCATACCTCCACTTCTGCTTGTGCCTGCACTCTCTGACCCCTaGCCTCTGACCCCATACTTCATTGAGGGAGTTTCTACTCCGATG | + |
Preference number: 1 (lower is better) Translates to: DLIPPLLLVPALSDP*PLTPYFIEGVSTPM Trigger: CATCGGAGTAGAAACTCCCTCAATGAAGTATGGGGTCAGAGGTCAGGGGTCAGAGAGTGCAGGCACAAGCAGAAGTGGAGGTATGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | GTCCATGCTGTTACTCTCCTATTACTTGGAGTCAGGGTCTCTCGATaGACCTGTAAGCCTGGCAGTAAACAGATCTCAGACTCTGCCCCC | + |
Preference number: 1 (lower is better) Translates to: VHAVTLLLLGVRVSR*TCKPGSKQISDSAP Trigger: GGGGGCAGAGTCTGAGATCTGTTTACTGCCAGGCTTACAGGTTCATCGAGAGACCCTGACTCCAAGTAATAGGAGAGTAACAGCATGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | ACAGCAGCAGCCTTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTaGTTGACTGCTGGCATCTGCTGTGTGCTCAAAGCTATTGCCAGC | + |
Preference number: 1 (lower is better) Translates to: TAAALAAGIVPKQAV*LTAGICCVLKAIAS Trigger: GCTGGCAATAGCTTTGAGCACACAGCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAAGGCTGCTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | CACGTGGATCTTATCATCATGGCTTCTGAGGGCTTCGATGCCTTCTaGAAACTCGAGAGATGTCTGGTTTGTGGGTACCGAAGGGAGGAT | + |
Preference number: 1 (lower is better) Translates to: HVDLIIMASEGFDAF*KLERCLVCGYRRED Trigger: ATCCTCCCTTCGGTACCCACAAACCAGACATCTCTCGAGTTTTCAGAAGGCATCGAAGCCCTCAGAAGCCATGATGATAAGATCCACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | CTCTCTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTaGTGGAGACTTCCCACAAGTCAAGATTTCTGCAGTTTGGCTGGC | + |
Preference number: 1 (lower is better) Translates to: LSAFEVYLERHNSAP*WRLPTSQDFCSLAG Trigger: GCCAGCCAAACTGCAGAAATCTTGACTTGTGGGAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | ACGTGCACTCCCAATACAGGTTCCCGAGAACCTCTGCATCTTTGCTaGTACACAAAATACCGGCAAGAAGCCCCTACAGTCTTGTCTCTT | + |
Preference number: 1 (lower is better) Translates to: TCTPNTGSREPLHLC*YTKYRQEAPTVLSL Trigger: AAGAGACAAGACTGTAGGGGCTTCTTGCCGGTATTTTGTGTAGCAGCAAAGATGCAGAGGTTCTCGGGAACCTGTATTGGGAGTGCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | TCTGGCTGGCAAGCCTTAATCAGCACCACGTGGATCTTATCATCATaGCTTCTGAGGGCTTCGATGCCTTCTGAAAACTCGAGAGATGTC | + |
Preference number: 1 (lower is better) Translates to: SGWQALISTTWILSS*LLRASMPSENSRDV Trigger: GACATCTCTCGAGTTTTCAGAAGGCATCGAAGCCCTCAGAAGCCATGATGATAAGATCCACGTGGTGCTGATTAAGGCTTGCCAGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | GCAAGGGTCCCCAAGAAGCGCTTGGTTCTCTGTCTCTTTAGCATTTaGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTTTCTGT | + |
Preference number: 1 (lower is better) Translates to: ARVPKKRLVLCLFSI*GIRFQNQEIPPSFC Trigger: ACAGAAAGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACAGAGAACCAAGCGCTTCTTGGGGACCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | ATATTCCTTTGCCATACGCTGACATACCCTGTTCACCAACACTTCTaGCCCTGTCTCCTGCAGACACTGGACATCTTCTTTGTGAGGGGA | + |
Preference number: 1 (lower is better) Translates to: IFLCHTLTYPVHQHF*PCLLQTLDIFFVRG Trigger: TCCCCTCACAAAGAAGATGTCCAGTGTCTGCAGGAGACAGGGTCAGAAGTGTTGGTGAACAGGGTATGTCAGCGTATGGCAAAGGAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | AACAACTATAAGCATCCCTCCCCCATCATCTGCTGTGTCTCTGGCTaGCAAGCCTTAATCAGCACCACGTGGATCTTATCATCATGGCTT | + |
Preference number: 1 (lower is better) Translates to: NNYKHPSPIICCVSG*QALISTTWILSSWL Trigger: AAGCCATGATGATAAGATCCACGTGGTGCTGATTAAGGCTTGCCAGCCAGAGACACAGCAGATGATGGGGGAGGGATGCTTATAGTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | AGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTaGTTCTCTGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATC | + |
Preference number: 1 (lower is better) Translates to: SLASPFILQGSPRSA*FSVSLAFGGFAFRI Trigger: GATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACAGAGAACCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | CAGCCTACACTACCATGCCTGGCTTCATTTCTGAAGATCTCTCACTaGAATACCACACACACACACACACACACACACACAAACACACAC | + |
Preference number: 1 (lower is better) Translates to: QPTLPCLASFLKISH*NTTHTHTHTHTNTH Trigger: GTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTATTTCAGTGAGAGATCTTCAGAAATGAAGCCAGGCATGGTAGTGTAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 90 bp | TGTCTTCCCAAAGTTCCACCTTCTTCTGGTCTTCTTCCCTGTATATaGCCACCCTCTTCTACTTGGTCACCAAGATACTTCGCCCAATAT | + |
Preference number: 1 (lower is better) Translates to: CLPKVPPSSGLLPCI*PPSSTWSPRYFAQY Trigger: ATATTGGGCGAAGTATCTTGGTGACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGAACTTTGGGAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | CTTCCCACAAGTCAAGATTTCTGCAGTTTGGCTGGCTTAAGGTTGTaGCATACTGAGTGTCAGAGCCCTCTCTACACATTAAGTCACTTC | + |
Preference number: 1 (lower is better) Translates to: LPTSQDFCSLAGLRL*HTECQSPLYTLSHF Trigger: GAAGTGACTTAATGTGTAGAGAGGGCTCTGACACTCAGTATGCCACAACCTTAAGCCAGCCAAACTGCAGAAATCTTGACTTGTGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 90 bp | CCTTCTTCTGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTTaGTCACCAAGATACTTCGCCCAATATGTGAGGAGAGGAATATCT | + |
Preference number: 1 (lower is better) Translates to: PSSGLLPCICPPSST*SPRYFAQYVRRGIS Trigger: AGATATTCCTCTCCTCACATATTGGGCGAAGTATCTTGGTGACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | AAGTCAAGATTTCTGCAGTTTGGCTGGCTTAAGGTTGTGGCATACTaGGTGTCAGAGCCCTCTCTACACATTAAGTCACTTCACAGACGT | + |
Preference number: 1 (lower is better) Translates to: KSRFLQFGWLKVVAY*VSEPSLHIKSLHRR Trigger: ACGTCTGTGAAGTGACTTAATGTGTAGAGAGGGCTCTGACACTCAGTATGCCACAACCTTAAGCCAGCCAAACTGCAGAAATCTTGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 90 bp | CAGCCCAAAATAACTCAAAAAGATGTAACCTCCGAAACAAATCATTaGCTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATT | + |
Preference number: 1 (lower is better) Translates to: QPKITQKDVTSETNH*LFTDWESIVCLATI Trigger: AATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGATTTGTTTCGGAGGTTACATCTTTTTGAGTTATTTTGGGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCGCGTGCATGCATGAGTaGACGTGTGCGCACCTGCAC | + |
Preference number: 2 (lower is better) Translates to: AKERWPGTLAPATRQSNSACMHE*TCAHLH Trigger: GTGCAGGTGCGCACACGTGCACTCATGCATGCACGC...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTAGGTGGGGTGAGGAGTaGGGGCAGGTCAGTGGGCAG | + |
Preference number: 2 (lower is better) Translates to: SLGKPKQALCARPAQTLFRWGEE*GQVSGQ Trigger: CTGCCCACTGACCTGCCCCCACTCCTCACCCCACCT...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTGGGCAGGTGCAGCGATaGTGGGAGGGAAGAGCCAGC | + |
Preference number: 2 (lower is better) Translates to: SLGKPKQALCARPAQTLFGQVQR*WEGRAS Trigger: GCTGGCTCTTCCCTCCCACCATCGCTGCACCTGCCC...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCCATGTGTGTCTCTGCTaGGAAGGTGGGGTGAGGAGT | + |
Preference number: 2 (lower is better) Translates to: AKERWPGTLAPATRQSNSHVCLC*EGGVRS Trigger: ACTCCTCACCCCACCTTCTCAGCAGAGACACACATG...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCCTGTGGGACAGAAGCTaGTGCCTGAGAGTTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: AKERWPGTLAPATRQSNSLWDRS*CLRVGR Trigger: TCTCCCAACTCTCAGGCACCAGCTTCTGTCCCACAG...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCTGTGCCTGCACTCTCTaGCCCCTGACCTCTGACCCC | + |
Preference number: 2 (lower is better) Translates to: LLLKSILRGTIVPPAGDFCACTL*PLTSDP Trigger: GGGGTCAGAGGTCAGGGGTCAGAGAGTGCAGGCACA...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTACAGAAGCTGGTGCCTaGGAGTTGGGAGAGAGTCCA | + |
Preference number: 2 (lower is better) Translates to: SLGKPKQALCARPAQTLFTEAGA*ELGESP Trigger: TGGACTCTCTCCCAACTCTCAGGCACCAGCTTCTGT...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | AAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCATCTACGCCCGAGTCTCGCTaGTATCCTAGAGACCCAAGA | + |
Preference number: 2 (lower is better) Translates to: KRDGQAPWPLPPVNQIPSTPESR*YPRDPR Trigger: TCTTGGGTCTCTAGGATATCAGCGAGACTCGGGCGT...AGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCGTCTTTCCTTGTGCGTaGATGCATGAGTGCACGTGT | + |
Preference number: 2 (lower is better) Translates to: AKERWPGTLAPATRQSNSVFPCA*MHECTC Trigger: ACACGTGCACTCATGCATGCACGCACAAGGAAAGAC...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGAAGCACTCTACCAACTaGGAGCCAGAGCCCCACTTG | + |
Preference number: 2 (lower is better) Translates to: AMSLASPFILQGSPRSAWKHSTN*EPEPHL Trigger: CAAGTGGGGCTCTGGCTCTCAGTTGGTAGAGTGCTT...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTACATGCGGCCAAAGATaGAGTCTCTGTGGGACAGAA | + |
Preference number: 2 (lower is better) Translates to: SLGKPKQALCARPAQTLFTCGQR*SLCGTE Trigger: TTCTGTCCCACAGAGACTCCATCTTTGGCCGCATGT...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 90 bp | ATCCCTGCATTTCCTGCAGGCCCAGGAAGTCAGCAGGATATTCCTTaGCCATACGCTGACATACCCTGTTCACCAACACTTCTGACCCTG | + |
Preference number: 2 (lower is better) Translates to: IPAFPAGPGSQQDIP*PYADIPCSPTLLTL Trigger: CAGGGTCAGAAGTGTTGGTGAACAGGGTATGTCAGCGTATGGCAAAGGAATATCCTGCTGACTTCCTGGGCCTGCAGGAAATGCAGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | TTCTCTGGCAGTTTGCCACCAGCTAAGGTAAGGGAGTTTTCTCCCTACTTCTCAATCTCTGGCCTCCTCTaGCCCCATGTTCCCCTTGAG | + |
Preference number: 2 (lower is better) Translates to: FSGSLPPAKVREFSPYFSISGLL*PHVPLE Trigger: CTCAAGGGGAACATGGGGTCAGAGGAGGCCAGAGAT...TGAGAAGTAGGGAGAAAACTCCCTTACCTTAGCTGGTGGCAAACTGCCAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTTGGACATCTTCTTTGTaGGGGGACCCCGGCCAGCCT | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSWTSSL*GDPGQP Trigger: AGGCTGGCCGGGGTCCCCTCACAAAGAAGATGTCCA...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCTTCCCTGTGCTTCTGTaGTCACTTGTATGTTTTGCT | + |
Preference number: 2 (lower is better) Translates to: AKERWPGTLAPATRQSNSFPVLL*SLVCFA Trigger: AGCAAAACATACAAGTGACCACAGAAGCACAGGGAA...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 90 bp | AGGTCCACAGGACACCAAGGGTCCATGCTGTTACTCTCCTATTACTaGGAGTCAGGGTCTCTCGATGAACCTGTAAGCCTGGCAGTAAAC | + |
Preference number: 2 (lower is better) Translates to: RSTGHQGSMLLLSYY*ESGSLDEPVSLAVN Trigger: GTTTACTGCCAGGCTTACAGGTTCATCGAGAGACCCTGACTCCAAGTAATAGGAGAGTAACAGCATGGACCCTTGGTGTCCTGTGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 90 bp | GCGGACACCTCAATCATCTCTCTCTCTCTGCTTTTGAAGTCTATCTaGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCCCACAAGTC | + |
Preference number: 2 (lower is better) Translates to: ADTSIISLSLLLKSI*RGTIVPPAGDFPQV Trigger: GACTTGTGGGAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAGAGAGAGAGAGATGATTGAGGTGTCCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 90 bp | CCCAAAAGGAAGGCGGACACCTCAATCATCTCTCTCTCTCTGCTTTaGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGAC | + |
Preference number: 2 (lower is better) Translates to: PKRKADTSIISLSLL*KSILRGTIVPPAGD Trigger: GTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAGAGAGAGAGAGATGATTGAGGTGTCCGCCTTCCTTTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR TCA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGATCCTTTGCCATACGCTaGCATACCCTGTTCACCAAC | + |
Preference number: 2 (lower is better) Translates to: QVMPLANTSFTMSVWHLGSFAIR*HTLFTN Trigger: GTTGGTGAACAGGGTATGTCAGCGTATGGCAAAGGA...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR TCA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCCTGTGCTCTCTCTTATaGCTACATCACATACTTTTC | + |
Preference number: 2 (lower is better) Translates to: AKERWPGTLAPATRQSNSLCSLL*LHHILF Trigger: GAAAAGTATGTGATGTAGTCATAAGAGAGAGCACAG...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR GCA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGATCTGACCCTGTCTCCTaGAGACACTGGACATCTTCT | + |
Preference number: 2 (lower is better) Translates to: QVMPLANTSFTMSVWHLGSDPVS*RHWTSS Trigger: AGAAGATGTCCAGTGTCTGCAGGAGACAGGGTCAGA...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | AAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCATCTAGCAGGATATTCCTTTaGCATACGCTGACATACCCT | + |
Preference number: 2 (lower is better) Translates to: KRDGQAPWPLPPVNQIPSSRIFL*HTLTYP Trigger: AGGGTATGTCAGCGTATGGCAAAGGAATATCCTGCT...AGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR GCA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTCCTCTGCATCTTTGCTaGTACACAAAATACCGGCAA | + |
Preference number: 2 (lower is better) Translates to: SLGKPKQALCARPAQTLFPLHLC*YTKYRQ Trigger: TTGCCGGTATTTTGTGTAGCAGCAAAGATGCAGAGG...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGACCAAAGCAAGCAGTTTaGTTGACTGCTGGCATCTGC | + |
Preference number: 2 (lower is better) Translates to: QVMPLANTSFTMSVWHLGPKQAV*LTAGIC Trigger: GCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGG...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTTGGGACAGAAGCTGGTaGCTGAGAGTTGGGAGAGAG | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSWDRSW*LRVGRE Trigger: CTCTCTCCCAACTCTCAGGCACCAGCTTCTGTCCCA...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGCTGCCGAGGCAACCCTaGCCTCTGGACAGGACCCAC | + |
Preference number: 2 (lower is better) Translates to: LHVSSEHICNFYLWRMPVLPRQP*PLDRTH Trigger: GTGGGTCCTGTCCAGAGGGCAGGGTTGCCTCGGCAG...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGCAGGTGCAGCGATGGTaGGAGGGAAGAGCCAGCGGC | + |
Preference number: 2 (lower is better) Translates to: LHVSSEHICNFYLWRMPVQVQRW*EGRASG Trigger: GCCGCTGGCTCTTCCCTCCCACCATCGCTGCACCTG...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | TCCACCTTCTTCTGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTTGGTCGATATGCCTGGGAATTaGCTTCAGGACTTTCAGCAG | + |
Preference number: 2 (lower is better) Translates to: STFFWSSSLYMPTLFYLVDMPGN*LQDFQQ Trigger: CTGCTGAAAGTCCTGAAGTCAATTCCCAGGCATATC...GACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | TTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCTGTGTCTCACACACACACTTGTGTGACGACCTTGTaGTCTTGCCCCTGCCAAGCA | + |
Preference number: 2 (lower is better) Translates to: LNFHLDFIPKAPVSHTHTCVTTL*SCPCQA Trigger: TGCTTGGCAGGGGCAAGATCACAAGGTCGTCACACA...AGTGTGTGTGTGAGACACAGGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTCCTCAGCTTCCCAAGTaGTGGGATAACAGGTGTGTG | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSPQLPK*WDNRCV Trigger: CACACACCTGTTATCCCAGCACTTGGGAAGCTGAGG...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | TTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCTGTGTCTCACACACACACTTCCCAGATTCTCCCATaGTGGCCTTTGGGCTTCAGC | + |
Preference number: 2 (lower is better) Translates to: LNFHLDFIPKAPVSHTHTSQILP*WPLGFS Trigger: GCTGAAGCCCAAAGGCCAGCATGGGAGAATCTGGGA...AGTGTGTGTGTGAGACACAGGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | GTCTCTGCTCCACCAATCCCAGGTGGATCCCAAGTTCCTGAAGATCTAGCATCTCGTTTAATGAGCACTTaGCTGTGCAGACAGAGAATG | + |
Preference number: 2 (lower is better) Translates to: VSAPPIPGGSQVPEDLASRLMST*LCRQRM Trigger: CATTCTCTGTCTGCACAGGCAAGTGCTCATTAAACG...AGATGCTAGATCTTCAGGAACTTGGGATCCACCTGGGATTGGTGGAGCAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | AAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCATCTTTAATCAGCACCACGTaGATCTTATCATCATGGCTT | + |
Preference number: 2 (lower is better) Translates to: KRDGQAPWPLPPVNQIPSLISTT*ILSSWL Trigger: AAGCCATGATGATAAGATCCACGTGGTGCTGATTAA...AGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGGCCAGCGGCTCAGGGTaGGGGGTGGATCATGTGTGT | + |
Preference number: 2 (lower is better) Translates to: LHVSSEHICNFYLWRMPVASGSG*GVDHVC Trigger: ACACACATGATCCACCCCCCACCCTGAGCCGCTGGC...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | CCTACCTTAAATGTCTCTTCAGCCTCATTTCTCCATAGCCCCCTGGCTAAACACATGCTATTGTTGTTCTaGGATCTCTGGCCTCCTCTG | + |
Preference number: 2 (lower is better) Translates to: PTLNVSSASFLHSPLAKHMLLLF*DLWPPL Trigger: CAGAGGAGGCCAGAGATCTCAGAACAACAATAGCAT...GTGTTTAGCCAGGGGGCTATGGAGAAATGAGGCTGAAGAGACATTTAAGGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | TTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTTGACTGCTGGCATCTGCTCCTATAGGTGGCTCTaGTTCTATTATGCCCTCCCT | + |
Preference number: 2 (lower is better) Translates to: LAAGIVPKQAVWLTAGICSYRWL*FYYALP Trigger: AGGGAGGGCATAATAGAAGCAGAGCCACCTATAGGA...GCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCATTATCTTCCCAGAATaGATTCCCCAAAGGGGGATG | + |
Preference number: 2 (lower is better) Translates to: LLLKSILRGTIVPPAGDFIIFPE*IPQRGM Trigger: CATCCCCCTTTGGGGAATGCATTCTGGGAAGATAAT...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTCATCTGCTGTGTCTCTaGCTGGCAAGCCTTAATCAG | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSHLLCL*LASLNQ Trigger: CTGATTAAGGCTTGCCAGCCAGAGACACAGCAGATG...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTTTCTCCATAGCCCCCTaGCTAAACACACCCTCCAAA | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSFSIAP*LNTPSK Trigger: TTTGGAGGGTGTGTTTAGCCAGGGGGCTATGGAGAA...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTGTTTTTATTCAGTGCTaGGGATCGAACCCAGGGGTC | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSVFIQC*GSNPGV Trigger: GACCCCTGGGTTCGATCCCCAGCACTGAATAAAAAC...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTAATAGTGCCCCCTGCTaGAGACTTCCCACAAGTCAA | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSNSAPC*RLPTSQ Trigger: TTGACTTGTGGGAAGTCTCCAGCAGGGGGCACTATT...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 90 bp | AGACTTCCCACAAGTCAAGATTTCTGCAGTTTGGCTGGCTTAAGGTaGTGGCATACTGAGTGTCAGAGCCCTCTCTACACATTAAGTCAC | + |
Preference number: 2 (lower is better) Translates to: RLPTSQDFCSLAGLR*WHTECQSPLYTLSH Trigger: GTGACTTAATGTGTAGAGAGGGCTCTGACACTCAGTATGCCACAACCTTAAGCCAGCCAAACTGCAGAAATCTTGACTTGTGGGAAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 90 bp | ACCTTCTTCTGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTaGGTCACCAAGATACTTCGCCCAATATGTGAGGAGAGGAATATC | + |
Preference number: 2 (lower is better) Translates to: TFFWSSSLYMPTLFY*VTKILRPICEERNI Trigger: GATATTCCTCTCCTCACATATTGGGCGAAGTATCTTGGTGACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | ATCTGGACATTGGTGATTCCCTACATTGGTTTCTACAAACAGGGAATTCTGTCCTTTACAGAGGAGTCCTaGCCCCATCCCAGGAATGGT | + |
Preference number: 2 (lower is better) Translates to: IWTLVIPYIGFYKQGILSFTEES*PHPRNG Trigger: ACCATTCCTGGGATGGGGTCAGGACTCCTCTGTAAA...GGACAGAATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACCAATGTCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | ATCTGGACATTGGTGATTCCCTACATTGGTTTCTACAAACAGGGAATTCTGTCCGTTCACCAACACTTCTaGCCCTGTCTCCTGCAGACA | + |
Preference number: 2 (lower is better) Translates to: IWTLVIPYIGFYKQGILSVHQHF*PCLLQT Trigger: TGTCTGCAGGAGACAGGGTCAGAAGTGTTGGTGAAC...GGACAGAATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACCAATGTCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCGGAAATGTACAGATGTaGGTACCAGCCCAAAATAAC | + |
Preference number: 2 (lower is better) Translates to: LLLKSILRGTIVPPAGDFGNVQM*VPAQNN Trigger: GTTATTTTGGGCTGGTACTCACATCTGTACATTTCC...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGATACTTGGTCTTCCTTTaGTTGGAGGATGACTTATGT | + |
Preference number: 2 (lower is better) Translates to: QVMPLANTSFTMSVWHLGYLVFL*LEDDLC Trigger: ACATAAGTCATCCTCCAAGCAAAGGAAGACCAAGTA...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTGGATTATACCAGGCTTaGACCTCCATATCTAGCTTT | + |
Preference number: 2 (lower is better) Translates to: YQVSTLPVSHSLGNSRQAGLYQA*TSISSF Trigger: AAAGCTAGATATGGAGGTGCAAGCCTGGTATAATCC...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | TCCACCTTCTTCTGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTTGGTCTTGAACTCACAATTCTaGTCTCACCAACTGAGTCCT | + |
Preference number: 2 (lower is better) Translates to: STFFWSSSLYMPTLFYLVLNSQF*SHQLSP Trigger: AGGACTCAGTTGGTGAGAGCAGAATTGTGAGTTCAA...GACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | TTCTCTGGCAGTTTGCCACCAGCTAAGGTAAGGGAGTTTTCTCCCTACTTCTCAGACACCAAGGGTCCATaGTGTTACTCTCCTATTACT | + |
Preference number: 2 (lower is better) Translates to: FSGSLPPAKVREFSPYFSDTKGP*CYSPIT Trigger: AGTAATAGGAGAGTAACAGCATGGACCCTTGGTGTC...TGAGAAGTAGGGAGAAAACTCCCTTACCTTAGCTGGTGGCAAACTGCCAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGCGCCCCCACCCTCATTaGTGCATTCTAGACAAGCCC | + |
Preference number: 2 (lower is better) Translates to: LHVSSEHICNFYLWRMPVRPHPH*CILDKP Trigger: GGGCTTGTCTAGAATGCACCAATGAGGGTGGGGGCG...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | AGATGTCCCTTCTCTATCCTTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCCTGGTGCCTGAGAGTTaGGAGAGAGTCCAGCTTTTT | + |
Preference number: 2 (lower is better) Translates to: RCPFSILKLPSGLYSKGPLVPES*ERVQLF Trigger: AAAAAGCTGGACTCTCTCCCAACTCTCAGGCACCAG...GGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAAGGATAGAGAAGGGACATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | GTCTCTGCTCCACCAATCCCAGGTGGATCCCAAGTTCCTGAAGATCTAGCATCTTCCCAGGAATGGTTCTaGAGAATACAAATCAAGAAT | + |
Preference number: 2 (lower is better) Translates to: VSAPPIPGGSQVPEDLASSQEWF*RIQIKN Trigger: ATTCTTGATTTGTATTCTTCAGAACCATTCCTGGGA...AGATGCTAGATCTTCAGGAACTTGGGATCCACCTGGGATTGGTGGAGCAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTCTGAAGATCTCTCACTaGAATACCACACACACACAC | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSLKISH*NTTHTH Trigger: GTGTGTGTGTGTGGTATTTCAGTGAGAGATCTTCAG...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTCTAGAGTTACCAGTGTaGACTATCACATCTGGCCAA | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSLELPV*TITSGQ Trigger: TTGGCCAGATGTGATAGTGCACACTGGTAACTCTAG...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCCAAGACTTTCGAGAATaGTCAGAACTTCATAGCCAT | + |
Preference number: 2 (lower is better) Translates to: LLLKSILRGTIVPPAGDFQDFRE*SELHSH Trigger: ATGGCTATGAAGTTCTGAGCATTCTCGAAAGTCTTG...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCTGTGTCTCACACACACACTCTTTCAACCACCATCTaGAAGAGTTCGACTCCCTCT | + |
Preference number: 2 (lower is better) Translates to: LNFHLDFIPKAPVSHTHTLSTTI*KSSTPS Trigger: AGAGGGAGTCGAACTCTTCCAGATGGTGGTTGAAAG...AGTGTGTGTGTGAGACACAGGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 90 bp | TTGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATTaGGACACAGTCCCACCAGTGGCTCACATTACGCAATCAGAATCT | + |
Preference number: 2 (lower is better) Translates to: LTIYRLGIHCLPGNY*DTVPPVAHITQSES Trigger: AGATTCTGATTGCGTAATGTGAGCCACTGGTGGGACTGTGTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | TCCACCTTCTTCTGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTTGGTCAACAACAAACTTTCCTaGAATGTCAGGGTAATTGGT | + |
Preference number: 2 (lower is better) Translates to: STFFWSSSLYMPTLFYLVNNKLS*NVRVIG Trigger: ACCAATTACCCTGACATTTCAGGAAAGTTTGTTGTT...GACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGCCCCACCCTCATTGGTaGATTCTAGACAAGCCCTCT | + |
Preference number: 2 (lower is better) Translates to: LHVSSEHICNFYLWRMPVPHPHW*ILDKPS Trigger: AGAGGGCTTGTCTAGAATGCACCAATGAGGGTGGGG...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | CCTACCTTAAATGTCTCTTCAGCCTCATTTCTCCATAGCCCCCTGGCTAAACACACCTTCTTTCCAGCATaGCTAACATATCTTGACGTA | + |
Preference number: 2 (lower is better) Translates to: PTLNVSSASFLHSPLAKHTFFPA*LTYLDV Trigger: TACGTCAAGATATGTTAGGCATGCTGGAAAGAAGGT...GTGTTTAGCCAGGGGGCTATGGAGAAATGAGGCTGAAGAGACATTTAAGGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR GCA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGAGGACTGTAGGTATGTaGTATACCTGTTTTTATTCA | + |
Preference number: 2 (lower is better) Translates to: AMSLASPFILQGSPRSAWRTVGM*YTCFYS Trigger: TGAATAAAAACAGGTATAGCACATACCTACAGTCCT...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | ATCTGGACATTGGTGATTCCCTACATTGGTTTCTACAAACAGGGAATTCTGTCCAGTTTGGTTGACTGCTaGCATCTGCTGTGTGCTCAA | + |
Preference number: 2 (lower is better) Translates to: IWTLVIPYIGFYKQGILSSLVDC*HLLCAQ Trigger: TTGAGCACACAGCAGATGCCAGCAGTCAACCAAACT...GGACAGAATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACCAATGTCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CCA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGCATAGATACTTCCCCTaGGTATCTAAACTATTTTCT | + |
Preference number: 2 (lower is better) Translates to: AMSLASPFILQGSPRSAWHRYFP*VSKLFS Trigger: AGAAAATAGTTTAGATACCCAGGGGAAGTATCTATG...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR GCA 90 bp | TATGTTATCTCCCTTAGGATTCTCTTTCACCTGCTCCAAGGTTTTGTTTTGTTTCTGGCATCTGCTGTGTaGTCAAAGCTATTGCCAGCC | + |
Preference number: 2 (lower is better) Translates to: YVISLRILFHLLQGFVLFLASAV*SKLLPA Trigger: GGCTGGCAATAGCTTTGAGCACACAGCAGATGCCAG...AAACAAAACAAAACCTTGGAGCAGGTGAAAGAGAATCCTAAGGGAGATAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR GCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTGGATTCTCTTTCACCTaGTCCAAGGTTTTGTTTTGT | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSGFSFT*SKVLFC Trigger: ACAAAACAAAACCTTGGAGCAGGTGAAAGAGAATCC...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR GCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGTCATACCTCCACTTCTaGTTGTGCCTGCACTCTCTG | + |
Preference number: 2 (lower is better) Translates to: LHVSSEHICNFYLWRMPVSYLHF*LCLHSL Trigger: CAGAGAGTGCAGGCACAAGCAGAAGTGGAGGTATGA...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTGGTGATTCCCTACATTaGTTTCTACAAACAGGGAAT | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSGDSLH*FLQTGN Trigger: ATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACC...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CCA 90 bp | TCCACCTTCTTCTGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTTGGTCATATGTAATCAAATCTaGACATTGGTGATTCCCTAC | + |
Preference number: 2 (lower is better) Translates to: STFFWSSSLYMPTLFYLVICNQI*TLVIPY Trigger: GTAGGGAATCACCAATGTCCAGATTTGATTACATAT...GACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGTCACCAACTGAGTCCTaGGGATTATACCAGGCTTGC | + |
Preference number: 2 (lower is better) Translates to: LHVSSEHICNFYLWRMPVSPTES*GLYQAC Trigger: GCAAGCCTGGTATAATCCCCAGGACTCAGTTGGTGA...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTTGCTCTGATCCCATTTaGTTCTTTATCCCTACTACT | + |
Preference number: 2 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSCSDPI*FFIPTT Trigger: AGTAGTAGGGATAAAGAACCAAATGGGATCAGAGCA...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CAA 90 bp | TCAAAAAGATGTAACCTCCGAAACAAATCATTGACTATTTACAGATaGGGAATCCATTGTCTGCCTGGCAACTATTTGGACACAGTCCCA | + |
Preference number: 2 (lower is better) Translates to: SKRCNLRNKSLTIYR*GIHCLPGNYLDTVP Trigger: TGGGACTGTGTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGATTTGTTTCGGAGGTTACATCTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR TCA 90 bp | TCATTGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATTTGGACAATCTTTATGGACCTTaGAATCATGGAGACGTTGGA | + |
Preference number: 2 (lower is better) Translates to: SLTIYRLGIHCLPGNYLDNLYGP*NHGDVG Trigger: TCCAACGTCTCCATGATTTCAAGGTCCATAAAGATT...GTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CCA 90 bp | TCATTGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATTTGGACTCTACTCCGATGGATTaGCAATGCTATTGTTGTTCT | + |
Preference number: 2 (lower is better) Translates to: SLTIYRLGIHCLPGNYLDSTPMD*QCYCCS Trigger: AGAACAACAATAGCATTGCCAATCCATCGGAGTAGA...GTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 90 bp | CCAGCCCAAAATAACTCAAAAAGATGTAACCTCCGAAACAAATCATaGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTAT | + |
Preference number: 2 (lower is better) Translates to: PAQNNSKRCNLRNKS*TIYRLGIHCLPGNY Trigger: ATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGATTTGTTTCGGAGGTTACATCTTTTTGAGTTATTTTGGGCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | TCATGTGTGTCTCTGCTGAGAAGGTGGGGTGAGGAGTaGGGGCAGGTCAGTGGGCAGCTCGCGGTCCTCCAG | + |
Preference number: 3 (lower is better) Translates to: SCVSLLRRWGEE*GQVSGQLAVLQ Trigger: CTGGAGGACCGCGAGCTGCCCACTGACCTGCCCCCACTCCTCACCCCACCTTCTCAGCAGAGACACACATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 72 bp | AGGTCAGTGGGCAGCTCGCGGTCCTCCAGCTTTACCTaGATGAAGCGGTTACGGGCCAGCGGCATGTTAGGC | + |
Preference number: 3 (lower is better) Translates to: RSVGSSRSSSFT*MKRLRASGMLG Trigger: GCCTAACATGCCGCTGGCCCGTAACCGCTTCATTCAGGTAAAGCTGGAGGACCGCGAGCTGCCCACTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 72 bp | GTCCATGCACTTGGTGAAACACTCAAGGACGGTCACTaGCGAGGCAACCCTGCCCTCTGGACAGGACCCACG | + |
Preference number: 3 (lower is better) Translates to: VHALGETLKDGH*RGNPALWTGPT Trigger: CGTGGGTCCTGTCCAGAGGGCAGGGTTGCCTCGGCAGTGACCGTCCTTGAGTGTTTCACCAAGTGCATGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | CTCAAGGACGGTCACTGCCGAGGCAACCCTGCCCTCTaGACAGGACCCACGAGTGTGGATGCTGACACCTTT | + |
Preference number: 3 (lower is better) Translates to: LKDGHCRGNPAL*TGPTSVDADTF Trigger: AAAGGTGTCAGCATCCACACTCGTGGGTCCTGTCCAGAGGGCAGGGTTGCCTCGGCAGTGACCGTCCTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 72 bp | GGCTCTACCACTGAGCCACGCCCCCACCCTCATTGGTaGATTCTAGACAAGCCCTCTACAGTGAGCCATGCC | + |
Preference number: 3 (lower is better) Translates to: GSTTEPRPHPHW*ILDKPSTVSHA Trigger: GGCATGGCTCACTGTAGAGGGCTTGTCTAGAATGCACCAATGAGGGTGGGGGCGTGGCTCAGTGGTAGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 72 bp | GCCCGGTCAGTCTTTCCTTGTGCGTGCATGCATGAGTaGACGTGTGCGCACCTGCACAAGGTCCACAGGACA | + |
Preference number: 3 (lower is better) Translates to: ARSVFPCACMHE*TCAHLHKVHRT Trigger: TGTCCTGTGGACCTTGTGCAGGTGCGCACACGTGCACTCATGCATGCACGCACAAGGAAAGACTGACCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | AAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCATCTCAGACTTTGATCACCTaGGGGGTGGGTGTCCGTGGG | + |
Preference number: 3 (lower is better) Translates to: KRDGQAPWPLPPVNQIPSQTLIT*GVGVRG Trigger: CCCACGGACACCCACCCCCAAGGTGATCAAAGTCTG...AGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCTTAGCCATGGGGCCATaGGTTCCCTGTGCTTCTGTG | + |
Preference number: 3 (lower is better) Translates to: AKERWPGTLAPATRQSNSLAMGP*VPCASV Trigger: CACAGAAGCACAGGGAACCAATGGCCCCATGGCTAA...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | AGGGGCTCTACCACTGAGCCACGCCCCCACCCTCATTaGTGCATTCTAGACAAGCCCTCTACAGTGAGCCAT | + |
Preference number: 3 (lower is better) Translates to: RGSTTEPRPHPH*CILDKPSTVSH Trigger: ATGGCTCACTGTAGAGGGCTTGTCTAGAATGCACCAATGAGGGTGGGGGCGTGGCTCAGTGGTAGAGCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | GAGGCAACCCTGCCCTCTGGACAGGACCCACGAGTGTaGATGCTGACACCTTTCAACCACCATCTGGAAGAG | + |
Preference number: 3 (lower is better) Translates to: EATLPSGQDPRV*MLTPFNHHLEE Trigger: CTCTTCCAGATGGTGGTTGAAAGGTGTCAGCATCCACACTCGTGGGTCCTGTCCAGAGGGCAGGGTTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | AAACCTCTACCGCTGAGTCATACTCCAGCCCCTCACTaGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAG | + |
Preference number: 3 (lower is better) Translates to: KPLPLSHTPAPH*GNLSKPSVPDQ Trigger: CTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGAGGGGCTGGAGTATGACTCAGCGGTAGAGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | ACTGCTTCCACCTTCAACTTCCCTGCCAAAGAGAGATaGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCA | + |
Preference number: 3 (lower is better) Translates to: TASTFNFPAKER*PGTLAPATRQS Trigger: TGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGCAGGGAAGTTGAAGGTGGAAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 72 bp | AGGCTTCACAGCATAGGCACTTGGTCCCATGACAACTaGGAAGTGGGCAGGGCTGACCCTCAGGATCTCTCC | + |
Preference number: 3 (lower is better) Translates to: RLHSIGTWSHDN*EVGRADPQDLS Trigger: GGAGAGATCCTGAGGGTCAGCCCTGCCCACTTCTCAGTTGTCATGGGACCAAGTGCCTATGCTGTGAAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTTACCTCCACTTCTGCTaGTGCCTGCACTCTCTGACC | + |
Preference number: 3 (lower is better) Translates to: SLGKPKQALCARPAQTLFYLHFC*CLHSLT Trigger: GGTCAGAGAGTGCAGGCACAAGCAGAAGTGGAGGTA...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 72 bp | CTCTGCTCCACCAATCCCAGGTGGATCCCAAGTTCCTaGAGATCTAGCATCTTCCACTGGGAAGAGAGCGCG | + |
Preference number: 3 (lower is better) Translates to: LCSTNPRWIPSS*RSSIFHWEESA Trigger: CGCGCTCTCTTCCCAGTGGAAGATGCTAGATCTTCAGGAACTTGGGATCCACCTGGGATTGGTGGAGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | GATGCAGACTTTGATCACCTTGGGGGTGGGTGTCCGTaGGCTTCACCAACAACTATAAGCATCCCTCCCCCA | + |
Preference number: 3 (lower is better) Translates to: DADFDHLGGGCP*ASPTTISIPPP Trigger: TGGGGGAGGGATGCTTATAGTTGTTGGTGAAGCCCACGGACACCCACCCCCAAGGTGATCAAAGTCTGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | TCAACTTCCCTGCCAAAGAGAGATGGCCAGGCACCTTaGCCCCTGCCACCCGTCAATCAAATTCCATCTAGC | + |
Preference number: 3 (lower is better) Translates to: STSLPKRDGQAP*PLPPVNQIPSS Trigger: GCTAGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGCAGGGAAGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCCTACTGAGTCTCTCATaGGTGAGTTCTAGGCAAGTG | + |
Preference number: 3 (lower is better) Translates to: AKERWPGTLAPATRQSNSLLSLS*VSSRQV Trigger: CACTTGCCTAGAACTCACCAATGAGAGACTCAGTAG...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTATGGGTGTTGGGGATTaGAACTCAGGTCCTCGAGAC | + |
Preference number: 3 (lower is better) Translates to: SLGKPKQALCARPAQTLFMGVGD*NSGPRD Trigger: GTCTCGAGGACCTGAGTTCAAATCCCCAACACCCAT...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 72 bp | TTGGTGCATTCTAGACAAGCCCTCTACAGTGAGCCATaGCCAGACTCCTCACTGGTAGAACCTAGCAGGCAC | + |
Preference number: 3 (lower is better) Translates to: LVHSRQALYSEP*PDSSLVEPSRH Trigger: GTGCCTGCTAGGTTCTACCAGTGAGGAGTCTGGGCATGGCTCACTGTAGAGGGCTTGTCTAGAATGCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 72 bp | GCACCTGCACAAGGTCCACAGGACACCAAGGGTCCATaGTGTTACTCTCCTATTACTTGGAGTCAGGGTCTC | + |
Preference number: 3 (lower is better) Translates to: APAQGPQDTKGP*CYSPITWSQGL Trigger: GAGACCCTGACTCCAAGTAATAGGAGAGTAACAGCATGGACCCTTGGTGTCCTGTGGACCTTGTGCAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | GTTGGGAAAATGCCCTTGGCCAACTCATCCTATAGGTaGCTCTGCTTCTATTATGCCCTCCCTCCCTCCCTC | + |
Preference number: 3 (lower is better) Translates to: VGKMPLANSSYR*LCFYYALPPSL Trigger: GAGGGAGGGAGGGAGGGCATAATAGAAGCAGAGCCACCTATAGGATGAGTTGGCCAAGGGCATTTTCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | CGAGAGATGTCTGGTTTGTGGGTACCGAAGGGAGGATaGCGTGTAGTCCATGCACTTGGTGAAACACTCAAG | + |
Preference number: 3 (lower is better) Translates to: REMSGLWVPKGG*RVVHALGETLK Trigger: CTTGAGTGTTTCACCAAGTGCATGGACTACACGCCATCCTCCCTTCGGTACCCACAAACCAGACATCTCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | CGATGCCTTCTGAAAACTCGAGAGATGTCTGGTTTGTaGGTACCGAAGGGAGGATGGCGTGTAGTCCATGCA | + |
Preference number: 3 (lower is better) Translates to: RCLLKTREMSGL*VPKGGWRVVHA Trigger: TGCATGGACTACACGCCATCCTCCCTTCGGTACCCACAAACCAGACATCTCTCGAGTTTTCAGAAGGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | AAGCATCCCTCCCCCATCATCTGCTGTGTCTCTGGCTaGCAAGCCTTAATCAGCACCACGTGGATCTTATCA | + |
Preference number: 3 (lower is better) Translates to: KHPSPIICCVSG*QALISTTWILS Trigger: TGATAAGATCCACGTGGTGCTGATTAAGGCTTGCCAGCCAGAGACACAGCAGATGATGGGGGAGGGATGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | ATCTGGACATTGGTGATTCCCTACATTGGTTTCTACAAACAGGGAATTCTGTCCCTCCCATGCTGGCCTTaGGGCTTCAGCGCCTCCCCA | + |
Preference number: 3 (lower is better) Translates to: IWTLVIPYIGFYKQGILSLPCWP*GFSASP Trigger: TGGGGAGGCGCTGAAGCCCAAAGGCCAGCATGGGAG...GGACAGAATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACCAATGTCCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | AAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCATCTCAAGATTTCTGCAGTTaGGCTGGCTTAAGGTTGTGG | + |
Preference number: 3 (lower is better) Translates to: KRDGQAPWPLPPVNQIPSQDFCS*AGLRLW Trigger: CCACAACCTTAAGCCAGCCAAACTGCAGAAATCTTG...AGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGTTGGCTGGCTTAAGGTaGTGGCATACTGAGTGTCAG | + |
Preference number: 3 (lower is better) Translates to: AMSLASPFILQGSPRSAWLAGLR*WHTECQ Trigger: CTGACACTCAGTATGCCACAACCTTAAGCCAGCCAA...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTCTTTTGAAGTCTATCTaGAGAGGCACAATAGTGCCC | + |
Preference number: 3 (lower is better) Translates to: SLGKPKQALCARPAQTLFLLKSI*RGTIVP Trigger: GGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAG...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 72 bp | CCCAGGAAGTCAGCAGGATATTCCTTTGCCATACGCTaGCATACCCTGTTCACCAACACTTCTGACCCTGTC | + |
Preference number: 3 (lower is better) Translates to: PRKSAGYSFAIR*HTLFTNTSDPV Trigger: GACAGGGTCAGAAGTGTTGGTGAACAGGGTATGTCAGCGTATGGCAAAGGAATATCCTGCTGACTTCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 72 bp | TTCCTGCAGGCCCAGGAAGTCAGCAGGATATTCCTTTaGCATACGCTGACATACCCTGTTCACCAACACTTC | + |
Preference number: 3 (lower is better) Translates to: FLQAQEVSRIFL*HTLTYPVHQHF Trigger: GAAGTGTTGGTGAACAGGGTATGTCAGCGTATGGCAAAGGAATATCCTGCTGACTTCCTGGGCCTGCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR GCA 72 bp | CCCAATACAGGTTCCCGAGAACCTCTGCATCTTTGCTaGTACACAAAATACCGGCAAGAAGCCCCTACAGTC | + |
Preference number: 3 (lower is better) Translates to: PNTGSREPLHLC*YTKYRQEAPTV Trigger: GACTGTAGGGGCTTCTTGCCGGTATTTTGTGTAGCAGCAAAGATGCAGAGGTTCTCGGGAACCTGTATTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | GTACACGTGGCCACACCTGGCTTTTTATATGGGTGTTaGGGATTTGAACTCAGGTCCTCGAGACTGGATAGC | + |
Preference number: 3 (lower is better) Translates to: VHVATPGFLYGC*GFELRSSRLDS Trigger: GCTATCCAGTCTCGAGGACCTGAGTTCAAATCCCCAACACCCATATAAAAAGCCAGGTGTGGCCACGTGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CCA 72 bp | CTCCTGGTCCCTAAGATAACTGGCTACAACGTCCTCTaGAGACACCTTGTGTTGTCTTCCCAAAGTTCCACC | + |
Preference number: 3 (lower is better) Translates to: LLVPKITGYNVL*RHLVLSSQSST Trigger: GGTGGAACTTTGGGAAGACAACACAAGGTGTCTCCAGAGGACGTTGTAGCCAGTTATCTTAGGGACCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCGTTGGGAAAATGCCCTaGGCCAACTCATCCTATAGG | + |
Preference number: 3 (lower is better) Translates to: LLLKSILRGTIVPPAGDFVGKMP*ANSSYR Trigger: CCTATAGGATGAGTTGGCCAAGGGCATTTTCCCAAC...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGGTGTGCTCAAAGCTATaGCCAGCCAACACTACTCTT | + |
Preference number: 3 (lower is better) Translates to: AMSLASPFILQGSPRSAWVCSKL*PANTTL Trigger: AAGAGTAGTGTTGGCTGGCAATAGCTTTGAGCACAC...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGTTGTTGAGGGAAGACTaGAATCTGCTATCGTCCTGC | + |
Preference number: 3 (lower is better) Translates to: AMSLASPFILQGSPRSAWLLRED*NLLSSC Trigger: GCAGGACGATAGCAGATTCAAGTCTTCCCTCAACAA...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 72 bp | CAATGCTATTGTTGTTCTGAGATCTCTGGCCTCCTCTaGCCCCATGTTCCCCTTGAGAATGGCCAGTTCTCA | + |
Preference number: 3 (lower is better) Translates to: QCYCCSEISGLL*PHVPLENGQFS Trigger: TGAGAACTGGCCATTCTCAAGGGGAACATGGGGTCAGAGGAGGCCAGAGATCTCAGAACAACAATAGCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | TTCTACTCCGATGGATTGGCAATGCTATTGTTGTTCTaGGATCTCTGGCCTCCTCTGACCCCATGTTCCCCT | + |
Preference number: 3 (lower is better) Translates to: FYSDGLAMLLLF*DLWPPLTPCSP Trigger: AGGGGAACATGGGGTCAGAGGAGGCCAGAGATCTCAGAACAACAATAGCATTGCCAATCCATCGGAGTAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | CCTCAGCTTCCCAAGTGCTGGGATAACAGGTGTGTGTaGGTGTGTGTGATGCTGCATCTGGATTTGATCTCA | + |
Preference number: 3 (lower is better) Translates to: PQLPKCWDNRCV*VCVMLHLDLIS Trigger: TGAGATCAAATCCAGATGCAGCATCACACACACTCACACACACCTGTTATCCCAGCACTTGGGAAGCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | TGCCATACGCTGACATACCCTGTTCACCAACACTTCTaGCCCTGTCTCCTGCAGACACTGGACATCTTCTTT | + |
Preference number: 3 (lower is better) Translates to: CHTLTYPVHQHF*PCLLQTLDIFF Trigger: AAAGAAGATGTCCAGTGTCTGCAGGAGACAGGGTCAGAAGTGTTGGTGAACAGGGTATGTCAGCGTATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR GCA 72 bp | ACTCCCAATACAGGTTCCCGAGAACCTCTGCATCTTTaGTGCTACACAAAATACCGGCAAGAAGCCCCTACA | + |
Preference number: 3 (lower is better) Translates to: TPNTGSREPLHL*CYTKYRQEAPT Trigger: TGTAGGGGCTTCTTGCCGGTATTTTGTGTAGCAGCAAAGATGCAGAGGTTCTCGGGAACCTGTATTGGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | GCCTTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTaGTTGACTGCTGGCATCTGCTGTGTGCTCAAAGCT | + |
Preference number: 3 (lower is better) Translates to: ALAAGIVPKQAV*LTAGICCVLKA Trigger: AGCTTTGAGCACACAGCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | CCCAAGAAGCGCTTGGTTCTCTGTCTCTTTAGCATTTaGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCC | + |
Preference number: 3 (lower is better) Translates to: PKKRLVLCLFSI*GIRFQNQEIPP Trigger: GGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACAGAGAACCAAGCGCTTCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CAA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGACGTTTAATGAGCACTaGCCTGTGCAGACAGAGAAT | + |
Preference number: 3 (lower is better) Translates to: AMSLASPFILQGSPRSAWTFNEH*PVQTEN Trigger: ATTCTCTGTCTGCACAGGCAAGTGCTCATTAAACGT...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | CTTATCATCATGGCTTCTGAGGGCTTCGATGCCTTCTaGAAACTCGAGAGATGTCTGGTTTGTGGGTACCGA | + |
Preference number: 3 (lower is better) Translates to: LIIMASEGFDAF*KLERCLVCGYR Trigger: TCGGTACCCACAAACCAGACATCTCTCGAGTTTTCAGAAGGCATCGAAGCCCTCAGAAGCCATGATGATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | ATCCAAAGACGCTGCCACAGATTAAAAACACTGAGGTaGCTGCGACTCACCTCCAAGCGTATCTCCAGAGTT | + |
Preference number: 3 (lower is better) Translates to: IQRRCHRLKTLR*LRLTSKRISRV Trigger: AACTCTGGAGATACGCTTGGAGGTGAGTCGCAGTCACCTCAGTGTTTTTAATCTGTGGCAGCGTCTTTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR GCA 72 bp | GTTGACTGCTGGCATCTGCTGTGTGCTCAAAGCTATTaGCAGCCAACACTACTCTTAGTAGCTTCTATCCCT | + |
Preference number: 3 (lower is better) Translates to: VDCWHLLCAQSY*QPTLLLVASIP Trigger: AGGGATAGAAGCTACTAAGAGTAGTGTTGGCTGGCAATAGCTTTGAGCACACAGCAGATGCCAGCAGTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR GCA 72 bp | TGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTTGACTaGTGGCATCTGCTGTGTGCTCAAAGCTATTGCCAG | + |
Preference number: 3 (lower is better) Translates to: CRNCSKASSLVD*WHLLCAQSYCQ Trigger: CTGGCAATAGCTTTGAGCACACAGCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR GCA 72 bp | CTCCCATTCCGACTGACTGCCAGGACTGTAGGTATGTaGTATACCTGTTTTTATTCAGTGCTGGGGATCGAA | + |
Preference number: 3 (lower is better) Translates to: LPFRLTARTVGM*YTCFYSVLGIE Trigger: TTCGATCCCCAGCACTGAATAAAAACAGGTATAGCACATACCTACAGTCCTGGCAGTCAGTCGGAATGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | CAAGCCTTAATCAGCACCACGTGGATCTTATCATCATaGCTTCTGAGGGCTTCGATGCCTTCTGAAAACTCG | + |
Preference number: 3 (lower is better) Translates to: QALISTTWILSS*LLRASMPSENS Trigger: CGAGTTTTCAGAAGGCATCGAAGCCCTCAGAAGCCATGATGATAAGATCCACGTGGTGCTGATTAAGGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | CTTGAACTCACAATTCTGCTCTCACCAACTGAGTCCTaGGGATTATACCAGGCTTGCACCTCCATATCTAGC | + |
Preference number: 3 (lower is better) Translates to: LELTILLSPTES*GLYQACTSISS Trigger: GCTAGATATGGAGGTGCAAGCCTGGTATAATCCCCAGGACTCAGTTGGTGAGAGCAGAATTGTGAGTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | GAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTaGAGACTTCCCACAAGTCAAGATTTCTGCAGTTTG | + |
Preference number: 3 (lower is better) Translates to: EVYLERHNSAPC*RLPTSQDFCSL Trigger: CAAACTGCAGAAATCTTGACTTGTGGGAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | CACCTTGTGTTGTCTTCCCAAAGTTCCACCTTCTTCTaGTCTTCTTCCCTGTATATGCCCACCCTCTTCTAC | + |
Preference number: 3 (lower is better) Translates to: HLVLSSQSSTFF*SSSLYMPTLFY Trigger: GTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGAACTTTGGGAAGACAACACAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CAA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTCTCCTGTGGCAAATATaGCTAAATGACTCTCTGGGA | + |
Preference number: 3 (lower is better) Translates to: YQVSTLPVSHSLGNSRQALLWQI*LNDSLG Trigger: TCCCAGAGAGTCATTTAGCAATATTTGCCACAGGAG...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CAA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCTATCTTGACGTATACTaGGTCTTCCTTTGCTTGGAG | + |
Preference number: 3 (lower is better) Translates to: LLLKSILRGTIVPPAGDFYLDVY*VFLCLE Trigger: CTCCAAGCAAAGGAAGACCAAGTATACGTCAAGATA...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | GTTACTCTCCTATTACTTGGAGTCAGGGTCTCTCGATaGACCTGTAAGCCTGGCAGTAAACAGATCTCAGAC | + |
Preference number: 3 (lower is better) Translates to: VTLLLLGVRVSR*TCKPGSKQISD Trigger: GTCTGAGATCTGTTTACTGCCAGGCTTACAGGTTCATCGAGAGACCCTGACTCCAAGTAATAGGAGAGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | GACTGCAGCCTACACTACCATGCCTGGCTTCATTTCTaGAGATCTCTCACTGAAATACCACACACACACACA | + |
Preference number: 3 (lower is better) Translates to: DCSLHYHAWLHF*RSLTEIPHTHT Trigger: TGTGTGTGTGTGTGGTATTTCAGTGAGAGATCTTCAGAAATGAAGCCAGGCATGGTAGTGTAGGCTGCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR GCA 72 bp | TTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTaGTGGAGACTTCCCACAAGTCAAGATTTCTGCAGT | + |
Preference number: 3 (lower is better) Translates to: FEVYLERHNSAP*WRLPTSQDFCS Trigger: ACTGCAGAAATCTTGACTTGTGGGAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR-3UTR CAA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTACTACTTGGTCTGGATaGGTCAGGAGATTCAAGACT | + |
Preference number: 3 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSTTWSG*VRRFKT Trigger: AGTCTTGAATCTCCTGACCAATCCAGACCAAGTAGT...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | CACACACACACTGTCTGCCCCTTTATACAACTGCTCTaGTCCCATTTGGTTCTTTATCCCTACTACTTGGTC | + |
Preference number: 3 (lower is better) Translates to: HTHTVCPFIQLL*SHLVLYPYYLV Trigger: GACCAAGTAGTAGGGATAAAGAACCAAATGGGATCAGAGCAGTTGTATAAAGGGGCAGACAGTGTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | TTTCTGCAGTTTGGCTGGCTTAAGGTTGTGGCATACTaGGTGTCAGAGCCCTCTCTACACATTAAGTCACTT | + |
Preference number: 3 (lower is better) Translates to: FLQFGWLKVVAY*VSEPSLHIKSL Trigger: AAGTGACTTAATGTGTAGAGAGGGCTCTGACACTCAGTATGCCACAACCTTAAGCCAGCCAAACTGCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | CTACCATGCCTGGCTTCATTTCTGAAGATCTCTCACTaGAATACCACACACACACACACACACACACACACA | + |
Preference number: 3 (lower is better) Translates to: LPCLASFLKISH*NTTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTATTTCAGTGAGAGATCTTCAGAAATGAAGCCAGGCATGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR GCA 72 bp | CCTCCTGCCTCACTCTATGTGCTAGAGTTACCAGTGTaGACTATCACATCTGGCCAACTAGTTAGTTATTCT | + |
Preference number: 3 (lower is better) Translates to: PPASLYVLELPV*TITSGQLVSYS Trigger: AGAATAACTAACTAGTTGGCCAGATGTGATAGTGCACACTGGTAACTCTAGCACATAGAGTGAGGCAGGAGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR GCA 72 bp | AAAGTTCCACCTTCTTCTGGTCTTCTTCCCTGTATATaGCCACCCTCTTCTACTTGGTCACCAAGATACTTC | + |
Preference number: 3 (lower is better) Translates to: KVPPSSGLLPCI*PPSSTWSPRYF Trigger: GAAGTATCTTGGTGACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | CCATACTTCATTGAGGGAGTTTCTACTCCGATGGATTaGCAATGCTATTGTTGTTCTGAGATCTCTGGCCTC | + |
Preference number: 3 (lower is better) Translates to: PYFIEGVSTPMD*QCYCCSEISGL Trigger: GAGGCCAGAGATCTCAGAACAACAATAGCATTGCCAATCCATCGGAGTAGAAACTCCCTCAATGAAGTATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR GCA 72 bp | CACATTAAGTCACTTCACAGACGTTTAATGAGCACTTaGCTGTGCAGACAGAGAATGACAACACACACACAC | + |
Preference number: 3 (lower is better) Translates to: HIKSLHRRLMST*LCRQRMTTHTH Trigger: GTGTGTGTGTGTTGTCATTCTCTGTCTGCACAGGCAAGTGCTCATTAAACGTCTGTGAAGTGACTTAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | CCATTTGGTTCTTTATCCCTACTACTTGGTCTGGATTaGTCAGGAGATTCAAGACTTTCGAGAATGCTCAGA | + |
Preference number: 3 (lower is better) Translates to: PFGSLSLLLGLD*SGDSRLSRMLR Trigger: TCTGAGCATTCTCGAAAGTCTTGAATCTCCTGACCAATCCAGACCAAGTAGTAGGGATAAAGAACCAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | ATCTGGACATTGGTGATTCCCTACATTGGTTTCTACAAACAGGGAATTCTGTCCAAAGGAACAAGCATTTaGCTAGTTGGGAAAATGCCC | + |
Preference number: 3 (lower is better) Translates to: IWTLVIPYIGFYKQGILSKGTSI*LVGKMP Trigger: GGGCATTTTCCCAACTAGCAAAATGCTTGTTCCTTT...GGACAGAATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACCAATGTCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | TCATTGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATTTGGACAGATATGCCTGGGAATaGACTTCAGGACTTTCAGCA | + |
Preference number: 3 (lower is better) Translates to: SLTIYRLGIHCLPGNYLDRYAWE*TSGLSA Trigger: TGCTGAAAGTCCTGAAGTCAATTCCCAGGCATATCT...GTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTCTCCGAAACAAATCATaGACTATTTACAGATTGGGA | + |
Preference number: 3 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSLRNKS*TIYRLG Trigger: TCCCAATCTGTAAATAGTCAATGATTTGTTTCGGAG...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | AACAACAACAACAACAACAACAACAACAAACTTTCCTaGAATGTCAGGGTAATTGGTCCTCGGTCAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: NNNNNNNNNKLS*NVRVIGPRSEQ Trigger: CTGCTCTGACCGAGGACCAATTACCCTGACATTTCAGGAAAGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR CCA 72 bp | CTTTCCGTTGGGCCCATAATGGCCTTAAAAGATACATaGTGTTTCTCTTATTTTAGAGCTAAGGGAACATGG | + |
Preference number: 3 (lower is better) Translates to: LSVGPIMALKDT*CFSYFRAKGTW Trigger: CCATGTTCCCTTAGCTCTAAAATAAGAGAAACACCATGTATCTTTTAAGGCCATTATGGGCCCAACGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
3UTR TCA 72 bp | GTTCCCTGTGCTTCTGTGGTCACTTGTATGTTTTGCTaGGTGACTTGTTTGTGTAACTTCTGGAAAGTAATA | + |
Preference number: 3 (lower is better) Translates to: VPCASVVTCMFC*VTCLCNFWKVI Trigger: TATTACTTTCCAGAAGTTACACAAACAAGTCACTCAGCAAAACATACAAGTGACCACAGAAGCACAGGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR-3UTR CAA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGTTGGTCTTCCTTTGCTaGGAGGATGACTTATGTTAT | + |
Preference number: 3 (lower is better) Translates to: LHVSSEHICNFYLWRMPVLVFLC*EDDLCY Trigger: ATAACATAAGTCATCCTCCAAGCAAAGGAAGACCAA...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR TCA 72 bp | ATAACTCAAAAAGATGTAACCTCCGAAACAAATCATTaGCTATTTACAGATTGGGAATCCATTGTCTGCCTG | + |
Preference number: 3 (lower is better) Translates to: ITQKDVTSETNH*LFTDWESIVCL Trigger: CAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGATTTGTTTCGGAGGTTACATCTTTTTGAGTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCCCCACACTGGCTGCCTaGTCCCGAAGCAAGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: AKERWPGTLAPATRQSNSPTLAA*SRSKAR Trigger: CCTGGCCTTGCTTCGGGAGCAGGCAGCCAGTGTGGG...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
CDS-3UTR CCA 90 bp | AAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCATCTCACAGTCCAGGCACCTaGCTGTGGCGGGTCCCCCAG | + |
Preference number: 4 (lower is better) Translates to: KRDGQAPWPLPPVNQIPSHSPGT*LWRVPQ Trigger: CTGGGGGACCCGCCACAGCCAGGTGCCTGGACTGTG...AGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | TCACTGCTGACTTCCCAGATTCTCCCATGCTGGCCTTaGGGCTTCAGCGCCTCCCCAGACCCCTCCTGTCAC | + |
Preference number: 4 (lower is better) Translates to: SLLTSQILPCWP*GFSASPDPSCH Trigger: GTGACAGGAGGGGTCTGGGGAGGCGCTGAAGCCCAAAGGCCAGCATGGGAGAATCTGGGAAGTCAGCAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR TCA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGGCTGCCTCCTCCACCTaGGTCCCCACACTGGCTGCC | + |
Preference number: 4 (lower is better) Translates to: AMSLASPFILQGSPRSAWAASST*VPTLAA Trigger: GGCAGCCAGTGTGGGGACTCAGGTGGAGGAGGCAGC...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTGTCCCCCAGAGCTCTTaGCTCCCACCAGAGGGCACA | + |
Preference number: 4 (lower is better) Translates to: SLGKPKQALCARPAQTLFVPQSS*LPPEGT Trigger: TGTGCCCTCTGGTGGGAGGCAAGAGCTCTGGGGGAC...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
CDS-3UTR CCA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGGCTTCCCCTGGGTGCTaGGGACACTGGGACGCCTGG | + |
Preference number: 4 (lower is better) Translates to: AMSLASPFILQGSPRSAWASPGC*GHWDAW Trigger: CCAGGCGTCCCAGTGTCCCCAGCACCCAGGGGAAGC...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGAGCAGCACACAGCGGGTaGGCCCAGACGTCCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: QVMPLANTSFTMSVWHLGAAHSG*AQTSRE Trigger: CTCCCTGGACGTCTGGGCCCACCCGCTGTGTGCTGC...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTCCAGGCACCTGGCTGTaGCGGGTCCCCCAGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: YQVSTLPVSHSLGNSRQAPGTWL*RVPQSS Trigger: AGAGCTCTGGGGGACCCGCCACAGCCAGGTGCCTGG...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCTGCCGTCTACCATGGTaGTTACCCGGGGCTTTTCCA | + |
Preference number: 4 (lower is better) Translates to: AKERWPGTLAPATRQSNSCRLPW*LPGAFP Trigger: TGGAAAAGCCCCGGGTAACCACCATGGTAGACGGCA...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
CDS-3UTR TCA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCGTCCAGGGAGCATCCTaGAGCTGGCGCAGGCGCTGT | + |
Preference number: 4 (lower is better) Translates to: LLLKSILRGTIVPPAGDFVQGAS*SWRRRC Trigger: ACAGCGCCTGCGCCAGCTTCAGGATGCTCCCTGGAC...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
CDS-3UTR TCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTCGTGGCTGGACTGGGTaGGGCTCAGGGACCTGCGCC | + |
Preference number: 4 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSRGWTG*GSGTCA Trigger: GGCGCAGGTCCCTGAGCCTCACCCAGTCCAGCCACG...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
CDS-3UTR GCA 90 bp | TTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTTGACTGCTGGCATCTGCAGGGCTTCCCCTGGGTaGTGGGGACACTGGGACGCC | + |
Preference number: 4 (lower is better) Translates to: LAAGIVPKQAVWLTAGICRASPG*WGHWDA Trigger: GGCGTCCCAGTGTCCCCAGCACCCAGGGGAAGCCCT...GCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
||
CDS-3UTR CCA 90 bp | TTCTCTGGCAGTTTGCCACCAGCTAAGGTAAGGGAGTTTTCTCCCTACTTCTCAGGGTGCTGGGGACACTaGGACGCCTGGCGCTCTCGA | + |
Preference number: 4 (lower is better) Translates to: FSGSLPPAKVREFSPYFSGCWGH*DAWRSR Trigger: TCGAGAGCGCCAGGCGTCCCAGTGTCCCCAGCACCC...TGAGAAGTAGGGAGAAAACTCCCTTACCTTAGCTGGTGGCAAACTGCCAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGCCTGAGTCCCCACACTaGCTGCCTGCTCCCGAAGCA | + |
Preference number: 4 (lower is better) Translates to: AMSLASPFILQGSPRSAWPESPH*LPAPEA Trigger: TGCTTCGGGAGCAGGCAGCCAGTGTGGGGACTCAGG...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR TCA 90 bp | GTCTCTGCTCCACCAATCCCAGGTGGATCCCAAGTTCCTGAAGATCTAGCATCTGGGCCAGCAGGGACTTaGGGATTCGTTCAGCTGCCT | + |
Preference number: 4 (lower is better) Translates to: VSAPPIPGGSQVPEDLASGPAGT*GFVQLP Trigger: AGGCAGCTGAACGAATCCTCAAGTCCCTGCTGGCCC...AGATGCTAGATCTTCAGGAACTTGGGATCCACCTGGGATTGGTGGAGCAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCTGTGTCTCACACACACACTGCAGGGCAGCCACGCTaGACGGGGAACAGCCCTCGG | + |
Preference number: 4 (lower is better) Translates to: LNFHLDFIPKAPVSHTHTAGQPR*TGNSPR Trigger: CCGAGGGCTGTTCCCCGTGCAGCGTGGCTGCCCTGC...AGTGTGTGTGTGAGACACAGGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | GTCTCTGCTCCACCAATCCCAGGTGGATCCCAAGTTCCTGAAGATCTAGCATCTCCATCGGCACAGGCCTaGCATAAGTCGTCGGCACAG | + |
Preference number: 4 (lower is better) Translates to: VSAPPIPGGSQVPEDLASPSAQA*HKSSAQ Trigger: CTGTGCCGACGACTTATGCCAGGCCTGTGCCGATGG...AGATGCTAGATCTTCAGGAACTTGGGATCCACCTGGGATTGGTGGAGCAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | AGATGTCCCTTCTCTATCCTTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCTGCCGGGAGCAGCGATaGCCATCGGCACAGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: RCPFSILKLPSGLYSKGPCREQR*PSAQAW Trigger: CCAGGCCTGTGCCGATGGGCATCGCTGCTCCCGGCA...GGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAAGGATAGAGAAGGGACATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTTGTCCCAGCACTTCCTaGTTCTGGGCCAGCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: YQVSTLPVSHSLGNSRQACPSTS*FWASRD Trigger: GTCCCTGCTGGCCCAGAAGCAGGAAGTGCTGGGACA...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | GCTATGAGTTTAGCATCTCCCTTCATCTTGCAAGGGTCCCCAAGAAGCGCTTGGAAAGCCACTGCATTCTaGAGGGCAGCCACGCTGCAC | + |
Preference number: 4 (lower is better) Translates to: AMSLASPFILQGSPRSAWKATAF*RAATLH Trigger: GTGCAGCGTGGCTGCCCTGCAGAATGCAGTGGCTTT...CCAAGCGCTTCTTGGGGACCCTTGCAAGATGAAGGGAGATGCTAAACTCATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | TTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTTGACTGCTGGCATCTGCTGCCCTGGGGGCTGGTaGTTAGGAACACCAGTGCCC | + |
Preference number: 4 (lower is better) Translates to: LAAGIVPKQAVWLTAGICCPGGW*LGTPVP Trigger: GGGCACTGGTGTTCCTAACCACCAGCCCCCAGGGCA...GCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGAGACACAGAACCTGGCTaGCAGCCATGTAACCCAGGG | + |
Preference number: 4 (lower is better) Translates to: QVMPLANTSFTMSVWHLGDTEPG*QPCNPG Trigger: CCCTGGGTTACATGGCTGCCAGCCAGGTTCTGTGTC...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR TCA 90 bp | TTCTCTGGCAGTTTGCCACCAGCTAAGGTAAGGGAGTTTTCTCCCTACTTCTCATCGTCCCCTTGGCCTTaGGCTTCATCCCCTCCTTGG | + |
Preference number: 4 (lower is better) Translates to: FSGSLPPAKVREFSPYFSSSPWP*ASSPPW Trigger: CCAAGGAGGGGATGAAGCTCAAGGCCAAGGGGACGA...TGAGAAGTAGGGAGAAAACTCCCTTACCTTAGCTGGTGGCAAACTGCCAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | TCCACCTTCTTCTGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTTGGTCAGCACTTCCTGCTTCTaGGCCAGCAGGGACTTGAGG | + |
Preference number: 4 (lower is better) Translates to: STFFWSSSLYMPTLFYLVSTSCF*ASRDLR Trigger: CCTCAAGTCCCTGCTGGCCCAGAAGCAGGAAGTGCT...GACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGACCAGGCGGCAATCCTTaGAGAGCAACTGAGAACAAG | + |
Preference number: 4 (lower is better) Translates to: QVMPLANTSFTMSVWHLGPGGNP*RATENK Trigger: CTTGTTCTCAGTTGCTCTGCAAGGATTGCCGCCTGG...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTGGGGGTTCTGGTCTTTaGCTTCTTTGGGAGTCAGGG | + |
Preference number: 4 (lower is better) Translates to: YQVSTLPVSHSLGNSRQAGGSGL*LLWESG Trigger: CCCTGACTCCCAAAGAAGGCAAAGACCAGAACCCCC...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | TCACTGGGGAAACCTAAGCAAGCCCTCTGTGCCCGACCAGCTCAAACCCTCTTTGGCTTTTCCAGGCCATaGTATGCTGTTAGGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: SLGKPKQALCARPAQTLFGFSRP*YAVRKS Trigger: TGACTTCCTAACAGCATACCATGGCCTGGAAAAGCC...AAAGAGGGTTTGAGCTGGTCGGGCACAGAGGGCTTGCTTAGGTTTCCCCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGAACCGATGTCCAGTTGTaGCAGACAGTCCTGGCAATA | + |
Preference number: 4 (lower is better) Translates to: QVMPLANTSFTMSVWHLGTDVQL*QTVLAI Trigger: TATTGCCAGGACTGTCTGGCACAACTGGACATCGGT...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCTTGGCCACCTGCTCCTaGCGCTCTATTTTGGTCAAC | + |
Preference number: 4 (lower is better) Translates to: LLLKSILRGTIVPPAGDFLATCS*RSILVN Trigger: GTTGACCAAAATAGAGCGCCAGGAGCAGGTGGCCAA...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | TATGTTATCTCCCTTAGGATTCTCTTTCACCTGCTCCAAGGTTTTGTTTTGTTTAGGCAGCCGCCGCCTTaGCCACCTGCTCCTGGCGCT | + |
Preference number: 4 (lower is better) Translates to: YVISLRILFHLLQGFVLFRQPPP*PPAPGA Trigger: AGCGCCAGGAGCAGGTGGCCAAGGCGGCGGCTGCCT...AAACAAAACAAAACCTTGGAGCAGGTGAAAGAGAATCCTAAGGGAGATAACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | AACCACCATCTGGAAGAGTTCGACTCCCTCTTAACGTaGGGCATCTTTGCTGAACCACTTGAACATGCGGCC | + |
Preference number: 4 (lower is better) Translates to: NHHLEEFDSLLT*GIFAEPLEHAA Trigger: GGCCGCATGTTCAAGTGGTTCAGCAAAGATGCCCAACGTTAAGAGGGAGTCGAACTCTTCCAGATGGTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | GGACACCAAGGGTCCATGCTGTTACTCTCCTATTACTaGGAGTCAGGGTCTCTCGATGAACCTGTAAGCCTG | + |
Preference number: 4 (lower is better) Translates to: GHQGSMLLLSYY*ESGSLDEPVSL Trigger: CAGGCTTACAGGTTCATCGAGAGACCCTGACTCCAAGTAATAGGAGAGTAACAGCATGGACCCTTGGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | CACTCCCAATACAGGTTCCCGAGAACCTCTGCATCTTaGCTGCTACACAAAATACCGGCAAGAAGCCCCTAC | + |
Preference number: 4 (lower is better) Translates to: HSQYRFPRTSAS*LLHKIPARSPY Trigger: GTAGGGGCTTCTTGCCGGTATTTTGTGTAGCAGCAAAGATGCAGAGGTTCTCGGGAACCTGTATTGGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR TCA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTGAAGTCACCAAGAAGTaGCCCCTTGGGATCCAGTAT | + |
Preference number: 4 (lower is better) Translates to: YQVSTLPVSHSLGNSRQAEVTKK*PLGIQY Trigger: ATACTGGATCCCAAGGGGTCACTTCTTGGTGACTTC...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTGGCTGGGCTCCACCCTaGTTCCCTATCTTGGTTCTA | + |
Preference number: 4 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSGWAPP*FPILVL Trigger: TAGAACCAAGATAGGGAAGCAGGGTGGAGCCCAGCC...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | AGATGTCCCTTCTCTATCCTTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCGGCAGAGAAAGCCACTaGATTCTGCAGGGCAGCCAC | + |
Preference number: 4 (lower is better) Translates to: RCPFSILKLPSGLYSKGPGRESH*ILQGSH Trigger: GTGGCTGCCCTGCAGAATGCAGTGGCTTTCTCTGCC...GGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAAGGATAGAGAAGGGACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | TTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTTGACTGCTGGCATCTGCACTTGCCGTCTACCATaGTGGTTACCCGGGGCTTTT | + |
Preference number: 4 (lower is better) Translates to: LAAGIVPKQAVWLTAGICTCRLP*WLPGAF Trigger: AAAAGCCCCGGGTAACCACCATGGTAGACGGCAAGT...GCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | AGCCTTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTaGGTTGACTGCTGGCATCTGCTGTGTGCTCAAAGC | + |
Preference number: 4 (lower is better) Translates to: SLSCRNCSKASS*VDCWHLLCAQS Trigger: GCTTTGAGCACACAGCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | TGGCCACACCTGGCTTTTTATATGGGTGTTGGGGATTaGAACTCAGGTCCTCGAGACTGGATAGCAAGCGTT | + |
Preference number: 4 (lower is better) Translates to: WPHLAFYMGVGD*NSGPRDWIASV Trigger: AACGCTTGCTATCCAGTCTCGAGGACCTGAGTTCAAATCCCCAACACCCATATAAAAAGCCAGGTGTGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR TCA 90 bp | CTGCTTTTGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTCCTTTGTAGTCCCCATTaGGGGAGAAGCGTTTCAAGA | + |
Preference number: 4 (lower is better) Translates to: LLLKSILRGTIVPPAGDFLCSPH*GRSVSR Trigger: TCTTGAAACGCTTCTCCCTCAATGGGGACTACAAAG...GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | TTCAGACCCACTCTTATCATCAGCCAGGTGATGCCATaGGCCAACACTTCATTCACAATGTCCGTCTGGCAT | + |
Preference number: 4 (lower is better) Translates to: FRPTLIISQVMP*ANTSFTMSVWH Trigger: ATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTGGCTGATGATAAGAGTGGGTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | AAGGCGGACACCTCAATCATCTCTCTCTCTCTGCTTTaGAAGTCTATCTTGAGAGGCACAATAGTGCCCCCT | + |
Preference number: 4 (lower is better) Translates to: KADTSIISLSLL*KSILRGTIVPP Trigger: AGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAGAGAGAGAGAGATGATTGAGGTGTCCGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | TGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTaGGTCACCAAGATACTTCGCCCAATATGTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: WSSSLYMPTLFY*VTKILRPICEE Trigger: CTCCTCACATATTGGGCGAAGTATCTTGGTGACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR TCA 90 bp | TCATTGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATTTGGACCGGGAGCTCTGGCCTTaGCAAGATCCAAGAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: SLTIYRLGIHCLPGNYLDRELWP*QDPRAH Trigger: ATGGGCTCTTGGATCTTGTCAAGGCCAGAGCTCCCG...GTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR TCA 90 bp | TCCACCTTCTTCTGGTCTTCTTCCCTGTATATGCCCACCCTCTTCTACTTGGTCTGTTACCCCTTTCGATaGAGACCCCATCATCTTCTT | + |
Preference number: 4 (lower is better) Translates to: STFFWSSSLYMPTLFYLVCYPFR*RPHHLL Trigger: AAGAAGATGATGGGGTCTTCATCGAAAGGGGTAACA...GACCAAGTAGAAGAGGGTGGGCATATACAGGGAAGAAGACCAGAAGAAGGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTCTAGCTCCACCAGATTaGTGTCCACACCTGCCAATA | + |
Preference number: 4 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSLAPPD*CPHLPI Trigger: TATTGGCAGGTGTGGACAGCAATCTGGTGGAGCTAG...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTTTCAAGACCCTGTTCTaGTCATCTGCCACCAAGATT | + |
Preference number: 4 (lower is better) Translates to: YQVSTLPVSHSLGNSRQAFKTLF*SSATKI Trigger: AATCTTGGTGGCAGATGAGCAGAACAGGGTCTTGAA...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | AGATGTCCCTTCTCTATCCTTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCCTGACCCTACAAAATTaGCCTGGGGGCTGGTGGTTA | + |
Preference number: 4 (lower is better) Translates to: RCPFSILKLPSGLYSKGPLTLQN*PGGWWL Trigger: TAACCACCAGCCCCCAGGGCAATTTTGTAGGGTCAG...GGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAAGGATAGAGAAGGGACATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | ATCTGGACATTGGTGATTCCCTACATTGGTTTCTACAAACAGGGAATTCTGTCCGGCATGGCAGAGTCTTaGGTGTGTGTAACTGCTCCA | + |
Preference number: 4 (lower is better) Translates to: IWTLVIPYIGFYKQGILSGMAES*VCVTAP Trigger: TGGAGCAGTTACACACACCCAAGACTCTGCCATGCC...GGACAGAATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACCAATGTCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGGGTCTTTGCCTTCTTTaGGAGTCAGGGGCTGGGCTC | + |
Preference number: 4 (lower is better) Translates to: LHVSSEHICNFYLWRMPVGLCLL*ESGAGL Trigger: GAGCCCAGCCCCTGACTCCCAAAGAAGGCAAAGACC...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | ACAAGTCAAGATTTCTGCAGTTTGGCTGGCTTAAGGTaGTGGCATACTGAGTGTCAGAGCCCTCTCTACACA | + |
Preference number: 4 (lower is better) Translates to: TSQDFCSLAGLR*WHTECQSPLYT Trigger: TGTGTAGAGAGGGCTCTGACACTCAGTATGCCACAACCTTAAGCCAGCCAAACTGCAGAAATCTTGACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | TCAATCATCTCTCTCTCTCTGCTTTTGAAGTCTATCTaGAGAGGCACAATAGTGCCCCCTGCTGGAGACTTC | + |
Preference number: 4 (lower is better) Translates to: SIISLSLLLKSI*RGTIVPPAGDF Trigger: GAAGTCTCCAGCAGGGGGCACTATTGTGCCTCTCAAGATAGACTTCAAAAGCAGAGAGAGAGAGATGATTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | ATAACTGGCTACAACGTCCTCTGGAGACACCTTGTGTaGTCTTCCCAAAGTTCCACCTTCTTCTGGTCTTCT | + |
Preference number: 4 (lower is better) Translates to: ITGYNVLWRHLV*SSQSSTFFWSS Trigger: AGAAGACCAGAAGAAGGTGGAACTTTGGGAAGACAACACAAGGTGTCTCCAGAGGACGTTGTAGCCAGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTTGACTGCTGGCATCTGCGACAAGATAGAGTTTTaGATTGGCAGAGAAAGCCAC | + |
Preference number: 4 (lower is better) Translates to: LAAGIVPKQAVWLTAGICDKIEF*IGRESH Trigger: GTGGCTTTCTCTGCCAATGCAAAACTCTATCTTGTC...GCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | ATCTGGACATTGGTGATTCCCTACATTGGTTTCTACAAACAGGGAATTCTGTCCAGCTTCCAGCAGAGTTaGGGAGGAGTCTTTGGAGTT | + |
Preference number: 4 (lower is better) Translates to: IWTLVIPYIGFYKQGILSSFQQS*GGVFGV Trigger: AACTCCAAAGACTCCTCCCCAACTCTGCTGGAAGCT...GGACAGAATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACCAATGTCCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | TCATTGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATTTGGACCCTACAAAATTGCCCTaGGGGCTGGTGGTTAGGAAC | + |
Preference number: 4 (lower is better) Translates to: SLTIYRLGIHCLPGNYLDPTKLP*GLVVRN Trigger: GTTCCTAACCACCAGCCCCCAGGGCAATTTTGTAGG...GTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | TTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTaGACTGCTGGCATCTGCTGTGTGCTCAAAGCTATT | + |
Preference number: 4 (lower is better) Translates to: LAAGIVPKQAVW*TAGICCVLKAI Trigger: AATAGCTTTGAGCACACAGCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CCA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTGATAGAGTTTTGCATTaGCAGAGAAAGCCACTGCAT | + |
Preference number: 4 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSDRVLH*QRKPLH Trigger: ATGCAGTGGCTTTCTCTGCCAATGCAAAACTCTATC...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | CTTCTATCCCTGTACATCACAAAAGGAACAAGCATTTaGCTAGTTGGGAAAATGCCCTTGGCCAACTCATCC | + |
Preference number: 4 (lower is better) Translates to: LLSLYITKGTSI*LVGKMPLANSS Trigger: GGATGAGTTGGCCAAGGGCATTTTCCCAACTAGCAAAATGCTTGTTCCTTTTGTGATGTACAGGGATAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | CCCATTTGGTTCTTTATCCCTACTACTTGGTCTGGATaGGTCAGGAGATTCAAGACTTTCGAGAATGCTCAG | + |
Preference number: 4 (lower is better) Translates to: PIWFFIPTTWSG*VRRFKTFENAQ Trigger: CTGAGCATTCTCGAAAGTCTTGAATCTCCTGACCAATCCAGACCAAGTAGTAGGGATAAAGAACCAAATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCTGTGTCTCACACACACACTAAACAGACTTGCCTCTaGCTTTGCACTTCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: LNFHLDFIPKAPVSHTHTKQTCL*LCTSSS Trigger: AGAAGAAGAAGTGCAAAGGCAGAGGCAAGTCTGTTT...AGTGTGTGTGTGAGACACAGGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | AAACAAATCATTGACTATTTACAGATTGGGAATCCATaGTCTGCCTGGCAACTATTTGGACACAGTCCCACC | + |
Preference number: 4 (lower is better) Translates to: KQIIDYLQIGNP*SAWQLFGHSPT Trigger: GGTGGGACTGTGTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGATTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR TCA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGTATTCCCAGATCACCTaGCCTAACCCATCACAGAAA | + |
Preference number: 4 (lower is better) Translates to: LHVSSEHICNFYLWRMPVYSQIT*PNPSQK Trigger: TTTCTGTGATGGGTTAGGTCAGGTGATCTGGGAATA...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR GCA 90 bp | TATGTTATCTCCCTTAGGATTCTCTTTCACCTGCTCCAAGGTTTTGTTTTGTTTAAAACCACGCTATTCTaGTGCCAATCTGACCCTACA | + |
Preference number: 4 (lower is better) Translates to: YVISLRILFHLLQGFVLFKTTLF*CQSDPT Trigger: TGTAGGGTCAGATTGGCAGCAGAATAGCGTGGTTTT...AAACAAAACAAAACCTTGGAGCAGGTGAAAGAGAATCCTAAGGGAGATAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | TGTAACCTCCGAAACAAATCATTGACTATTTACAGATaGGGAATCCATTGTCTGCCTGGCAACTATTTGGAC | + |
Preference number: 4 (lower is better) Translates to: CNLRNKSLTIYR*GIHCLPGNYLD Trigger: GTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGATTTGTTTCGGAGGTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | TTCTTTCCAGCATGCCTAACATATCTTGACGTATACTaGGTCTTCCTTTGCTTGGAGGATGACTTATGTTAT | + |
Preference number: 4 (lower is better) Translates to: FFPACLTYLDVY*VFLCLEDDLCY Trigger: ATAACATAAGTCATCCTCCAAGCAAAGGAAGACCAAGTATACGTCAAGATATGTTAGGCATGCTGGAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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3UTR CAA 72 bp | AATAACTCAAAAAGATGTAACCTCCGAAACAAATCATaGACTATTTACAGATTGGGAATCCATTGTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: NNSKRCNLRNKS*TIYRLGIHCLP Trigger: AGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGATTTGTTTCGGAGGTTACATCTTTTTGAGTTATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | CCTCGAGCCCGGGATGGAGCTCTAGCTGGGGCAGCACACAGCGGGTaGGCCCAGACGTCCAGGGAGCATCCTGAAGCTGGCGCAGGCGCT | + |
Preference number: 5 (lower is better) Translates to: PRARDGALAGAAHSG*AQTSREHPEAGAGA Trigger: AGCGCCTGCGCCAGCTTCAGGATGCTCCCTGGACGTCTGGGCCCACCCGCTGTGTGCTGCCCCAGCTAGAGCTCCATCCCGGGCTCGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 90 bp | TGGGGCAGCACACAGCGGGTGGGCCCAGACGTCCAGGGAGCATCCTaGAGCTGGCGCAGGCGCTGTGTGATTGCTCCCTCCAGCGAAAGG | + |
Preference number: 5 (lower is better) Translates to: WGSTQRVGPDVQGAS*SWRRRCVIAPSSER Trigger: CCTTTCGCTGGAGGGAGCAATCACACAGCGCCTGCGCCAGCTTCAGGATGCTCCCTGGACGTCTGGGCCCACCCGCTGTGTGCTGCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | AGCAGGTGGCAGTTCTTGTCCTCGAGCCCGGGATGGAGCTCTAGCTaGGGCAGCACACAGCGGGTGGGCCCAGACGTCCAGGGAGCATCC | + |
Preference number: 5 (lower is better) Translates to: SRWQFLSSSPGWSSS*GSTQRVGPDVQGAS Trigger: GGATGCTCCCTGGACGTCTGGGCCCACCCGCTGTGTGCTGCCCCAGCTAGAGCTCCATCCCGGGCTCGAGGACAAGAACTGCCACCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 90 bp | CGGCACAGTCCAGGCACCTGGCTGTGGCGGGTCCCCCAGAGCTCTTaGCTCCCACCAGAGGGCACAGAGCGCAAGTTGGCTTCCCTGAAT | + |
Preference number: 5 (lower is better) Translates to: RHSPGTWLWRVPQSS*LPPEGTERKLASLN Trigger: ATTCAGGGAAGCCAACTTGCGCTCTGTGCCCTCTGGTGGGAGGCAAGAGCTCTGGGGGACCCGCCACAGCCAGGTGCCTGGACTGTGCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CCA 90 bp | TGCTTATGGGTCTGCCGGGAGCAGCGATGCCCATCGGCACAGGCCTaGCATAAGTCGTCGGCACAGTCCAGGCACCTGGCTGTGGCGGGT | + |
Preference number: 5 (lower is better) Translates to: CLWVCREQRCPSAQA*HKSSAQSRHLAVAG Trigger: ACCCGCCACAGCCAGGTGCCTGGACTGTGCCGACGACTTATGCCAGGCCTGTGCCGATGGGCATCGCTGCTCCCGGCAGACCCATAAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS TCA 90 bp | TGGGCCAGCAGGGACTTGAGGATTCGTTCAGCTGCCTCCTCCACCTaGGTCCCCACACTGGCTGCCTGCTCCCGAAGCAAGGCCAGGGCT | + |
Preference number: 5 (lower is better) Translates to: WASRDLRIRSAASST*VPTLAACSRSKARA Trigger: AGCCCTGGCCTTGCTTCGGGAGCAGGCAGCCAGTGTGGGGACTCAGGTGGAGGAGGCAGCTGAACGAATCCTCAAGTCCCTGCTGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | AAGATGAGTCGGAGCAGGTGGCAGTTCTTGTCCTCGAGCCCGGGATaGAGCTCTAGCTGGGGCAGCACACAGCGGGTGGGCCCAGACGTC | + |
Preference number: 5 (lower is better) Translates to: KMSRSRWQFLSSSPG*SSSWGSTQRVGPDV Trigger: GACGTCTGGGCCCACCCGCTGTGTGCTGCCCCAGCTAGAGCTCCATCCCGGGCTCGAGGACAAGAACTGCCACCTGCTCCGACTCATCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 90 bp | GCCCAGACGTCCAGGGAGCATCCTGAAGCTGGCGCAGGCGCTGTGTaGTTGCTCCCTCCAGCGAAAGGATCTCGGCCTCTAGACCCAAGC | + |
Preference number: 5 (lower is better) Translates to: AQTSREHPEAGAGAV*LLPPAKGSRPLDPS Trigger: GCTTGGGTCTAGAGGCCGAGATCCTTTCGCTGGAGGGAGCAATCACACAGCGCCTGCGCCAGCTTCAGGATGCTCCCTGGACGTCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | AGCACTCGACGGGCAAAGGCAGCCGCCGCCTTGGCCACCTGCTCCTaGCGCTCTATTTTGGTCAACCTCTCCCTGGTAGCCTCCTCAGCA | + |
Preference number: 5 (lower is better) Translates to: STRRAKAAAALATCS*RSILVNLSLVASSA Trigger: TGCTGAGGAGGCTACCAGGGAGAGGTTGACCAAAATAGAGCGCCAGGAGCAGGTGGCCAAGGCGGCGGCTGCCTTTGCCCGTCGAGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | TACCTCCACATGGCCTGCCACACTGACAGCTACTCGGTCTCCACATaGCATTGCGGCCACGGCGTGGCTGGACTGGGTGAGGCTCAGGGA | + |
Preference number: 5 (lower is better) Translates to: YLHMACHTDSYSVST*HCGHGVAGLGEAQG Trigger: TCCCTGAGCCTCACCCAGTCCAGCCACGCCGTGGCCGCAATGCCATGTGGAGACCGAGTAGCTGTCAGTGTGGCAGGCCATGTGGAGGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 90 bp | CCCGGAGTTGTCCCAGCACTTCCTGCTTCTGGGCCAGCAGGGACTTaGGGATTCGTTCAGCTGCCTCCTCCACCTGAGTCCCCACACTGG | + |
Preference number: 5 (lower is better) Translates to: PGVVPALPASGPAGT*GFVQLPPPPESPHW Trigger: CCAGTGTGGGGACTCAGGTGGAGGAGGCAGCTGAACGAATCCTCAAGTCCCTGCTGGCCCAGAAGCAGGAAGTGCTGGGACAACTCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 90 bp | ACCAAGTCAACGACACGGTGCTTATGGGTCTGCCGGGAGCAGCGATaGCCATCGGCACAGGCCTGGCATAAGTCGTCGGCACAGTCCAGG | + |
Preference number: 5 (lower is better) Translates to: TKSTTRCLWVCREQR*PSAQAWHKSSAQSR Trigger: CCTGGACTGTGCCGACGACTTATGCCAGGCCTGTGCCGATGGGCATCGCTGCTCCCGGCAGACCCATAAGCACCGTGTCGTTGACTTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CCA 90 bp | CAGGCCGAGGGAGGAGGCCGGAACCTTCTAGGTTTGGCCTCAGGATaGGGCTGGGCTCCCGAGAAACAGACTTGCCTCTGCCTTTGCACT | + |
Preference number: 5 (lower is better) Translates to: QAEGGGRNLLGLASG*GWAPEKQTCLCLCT Trigger: AGTGCAAAGGCAGAGGCAAGTCTGTTTCTCGGGAGCCCAGCCCCATCCTGAGGCCAAACCTAGAAGGTTCCGGCCTCCTCCCTCGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 90 bp | TTGCATTGGCAGAGAAAGCCACTGCATTCTGCAGGGCAGCCACGCTaGACGGGGAACAGCCCTCGGGGACCTGCACTGTGCCTTTGTAGT | + |
Preference number: 5 (lower is better) Translates to: LHWQRKPLHSAGQPR*TGNSPRGPALCLCS Trigger: ACTACAAAGGCACAGTGCAGGTCCCCGAGGGCTGTTCCCCGTGCAGCGTGGCTGCCCTGCAGAATGCAGTGGCTTTCTCTGCCAATGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 90 bp | GCGGGTAGCCAGGCTGCCATCTTTCTTGTATACCTCCACATGGCCTaGCACACTGACAGCTACTCGGTCTCCACATGGCATTGCGGCCAC | + |
Preference number: 5 (lower is better) Translates to: AGSQAAIFLVYLHMA*HTDSYSVSTWHCGH Trigger: GTGGCCGCAATGCCATGTGGAGACCGAGTAGCTGTCAGTGTGGCAGGCCATGTGGAGGTATACAAGAAAGATGGCAGCCTGGCTACCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | TCCTTCGGGGATTGTTTAGGCTCCTCAAAGATGAGTCGGAGCAGGTaGCAGTTCTTGTCCTCGAGCCCGGGATGGAGCTCTAGCTGGGGC | + |
Preference number: 5 (lower is better) Translates to: SFGDCLGSSKMSRSR*QFLSSSPGWSSSWG Trigger: GCCCCAGCTAGAGCTCCATCCCGGGCTCGAGGACAAGAACTGCCACCTGCTCCGACTCATCTTTGAGGAGCCTAAACAATCCCCGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | GAGGGAGGAGGCCGGAACCTTCTAGGTTTGGCCTCAGGATGGGGCTaGGCTCCCGAGAAACAGACTTGCCTCTGCCTTTGCACTTCTTCT | + |
Preference number: 5 (lower is better) Translates to: EGGGRNLLGLASGWG*APEKQTCLCLCTSS Trigger: AGAAGAAGTGCAAAGGCAGAGGCAAGTCTGTTTCTCGGGAGCCCAGCCCCATCCTGAGGCCAAACCTAGAAGGTTCCGGCCTCCTCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 90 bp | GGGCTTCCTTTTCTGCCACCCGAGTGGCTTCTAGCTCCACCAGATTaGTGTCCACACCTGCCAATAACTCCTCAAGGCCTGGCTTCCTGG | + |
Preference number: 5 (lower is better) Translates to: GLPFLPPEWLLAPPD*CPHLPITPQGLASW Trigger: CCAGGAAGCCAGGCCTTGAGGAGTTATTGGCAGGTGTGGACAGCAATCTGGTGGAGCTAGAAGCCACTCGGGTGGCAGAAAAGGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 90 bp | GTCAGGACTGACAAGATAGAGTTTTGCATTGGCAGAGAAAGCCACTaGATTCTGCAGGGCAGCCACGCTGCACGGGGAACAGCCCTCGGG | + |
Preference number: 5 (lower is better) Translates to: VRTDKIEFCIGRESH*ILQGSHAARGTALG Trigger: CCCGAGGGCTGTTCCCCGTGCAGCGTGGCTGCCCTGCAGAATGCAGTGGCTTTCTCTGCCAATGCAAAACTCTATCTTGTCAGTCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | CCTGCTCCCGAAGCAAGGCCAGGGCTTCCTTTTCTGCCACCCGAGTaGCTTCTAGCTCCACCAGATTGCTGTCCACACCTGCCAATAACT | + |
Preference number: 5 (lower is better) Translates to: PAPEARPGLPFLPPE*LLAPPDCCPHLPIT Trigger: AGTTATTGGCAGGTGTGGACAGCAATCTGGTGGAGCTAGAAGCCACTCGGGTGGCAGAAAAGGAAGCCCTGGCCTTGCTTCGGGAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | GCCAAAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCCAACTGAGAACAAGGTaGACAGAGGAAGCAGAGGGC | + |
Preference number: 5 (lower is better) Translates to: AKERWPGTLAPATRQSNSQLRTR*TEEAEG Trigger: GCCCTCTGCTTCCTCTGTCAACCTTGTTCTCAGTTG...GGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | AAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCATCTATCGTCCCCTTGGCCTaGAGCTTCATCCCCTCCTTG | + |
Preference number: 5 (lower is better) Translates to: KRDGQAPWPLPPVNQIPSIVPLA*SFIPSL Trigger: CAAGGAGGGGATGAAGCTCAAGGCCAAGGGGACGAT...AGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | AAGAGAGATGGCCAGGCACCTTGGCCCCTGCCACCCGTCAATCAAATTCCATCTGAGCTTCCAGCAGAGTaGGGGAGGAGTCTTTGGAGT | + |
Preference number: 5 (lower is better) Translates to: KRDGQAPWPLPPVNQIPSELPAE*GRSLWS Trigger: ACTCCAAAGACTCCTCCCCAACTCTGCTGGAAGCTC...AGATGGAATTTGATTGACGGGTGGCAGGGGCCAAGGTGCCTGGCCATCTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTAGCAGGTGGCAGTTCTaGTCCTCGAGCCCGGGATGG | + |
Preference number: 5 (lower is better) Translates to: YQVSTLPVSHSLGNSRQASRWQF*SSSPGW Trigger: CCATCCCGGGCTCGAGGACAAGAACTGCCACCTGCT...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | ATAAAGCGGGTAGCCAGGCTGCCATCTTTCTTGTATACCTCCACATaGCCTGCCACACTGACAGCTACTCGGTCTCCACATGGCATTGCG | + |
Preference number: 5 (lower is better) Translates to: IKRVARLPSFLYTST*PATLTATRSPHGIA Trigger: CGCAATGCCATGTGGAGACCGAGTAGCTGTCAGTGTGGCAGGCCATGTGGAGGTATACAAGAAAGATGGCAGCCTGGCTACCCGCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 90 bp | GTCAGGAAACCTGACCCTAAAGACATGGATGGTCCCATTGCTAAGTaGCACCACCAAGTACTTGCCGTCTACCATGGTGGTTACCCGGGG | + |
Preference number: 5 (lower is better) Translates to: VRKPDPKDMDGPIAK*HHQVLAVYHGGYPG Trigger: CCCCGGGTAACCACCATGGTAGACGGCAAGTACTTGGTGGTGTCACTTAGCAATGGGACCATCCATGTCTTTAGGGTCAGGTTTCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | TTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTTGACTGCTGGCATCTGCAGCTTCATCCCCTCCTaGGGTACCAGCCCCACCCTT | + |
Preference number: 5 (lower is better) Translates to: LAAGIVPKQAVWLTAGICSFIPS*GTSPTL Trigger: AAGGGTGGGGCTGGTACCCAAGGAGGGGATGAAGCT...GCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | TTAGCTGCAGGAATTGTTCCAAAGCAAGCAGTTTGGTTGACTGCTGGCATCTGCACCACCGATGTCCAGTaGTGCCAGACAGTCCTGGCA | + |
Preference number: 5 (lower is better) Translates to: LAAGIVPKQAVWLTAGICTTDVQ*CQTVLA Trigger: TGCCAGGACTGTCTGGCACAACTGGACATCGGTGGT...GCAGATGCCAGCAGTCAACCAAACTGCTTGCTTTGGAACAATTCCTGCAGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 90 bp | GTGTGTGTAACTGCTCCAGGCAGATTTTACAGGCTAGGAAATCGCTaGTCAGAGCTTCCAGCAGAGTTGGGGAGGAGTCTTTGGAGTTCA | + |
Preference number: 5 (lower is better) Translates to: VCVTAPGRFYRLGNR*SELPAELGRSLWSS Trigger: TGAACTCCAAAGACTCCTCCCCAACTCTGCTGGAAGCTCTGAGCAGCGATTTCCTAGCCTGTAAAATCTGCCTGGAGCAGTTACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CCA 90 bp | CCAGGCCATGGTATGCTGTTAGGAAGTCACCAAGAAGTGACCCCTTaGGATCCAGTATCACCACCTTGTTTACCTCTCGAAGGGTCAGAA | + |
Preference number: 5 (lower is better) Translates to: PGHGMLLGSHQEVTP*DPVSPPCLPLEGSE Trigger: TTCTGACCCTTCGAGAGGTAAACAAGGTGGTGATACTGGATCCCAAGGGGTCACTTCTTGGTGACTTCCTAACAGCATACCATGGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | CAGGTGATGCCATTGGCCAACACTTCATTCACAATGTCCGTCTGGCATCTCGGATCCAGTATCACCACCTaGTTTACCTCTCGAAGGGTC | + |
Preference number: 5 (lower is better) Translates to: QVMPLANTSFTMSVWHLGSSITT*FTSRRV Trigger: GACCCTTCGAGAGGTAAACAAGGTGGTGATACTGGA...TCCGAGATGCCAGACGGACATTGTGAATGAAGTGTTGGCCAATGGCATCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 90 bp | GTGCCAGACAGTCCTGGCAATAGGTATGTAGGCATGGCAGAGTCTTaGGTGTGTGTAACTGCTCCAGGCAGATTTTACAGGCTAGGAAAT | + |
Preference number: 5 (lower is better) Translates to: VPDSPGNRYVGMAES*VCVTAPGRFYRLGN Trigger: ATTTCCTAGCCTGTAAAATCTGCCTGGAGCAGTTACACACACCCAAGACTCTGCCATGCCTACATACCTATTGCCAGGACTGTCTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS-3UTR CAA 90 bp | CCTACCTTAAATGTCTCTTCAGCCTCATTTCTCCATAGCCCCCTGGCTAAACACTCTAGCTCCACCAGATaGCTGTCCACACCTGCCAAT | + |
Preference number: 5 (lower is better) Translates to: PTLNVSSASFLHSPLAKHSSSTR*LSTPAN Trigger: ATTGGCAGGTGTGGACAGCAATCTGGTGGAGCTAGA...GTGTTTAGCCAGGGGGCTATGGAGAAATGAGGCTGAAGAGACATTTAAGGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | CCTACCTTAAATGTCTCTTCAGCCTCATTTCTCCATAGCCCCCTGGCTAAACACAGGCTGCCATCTTTCTaGTATACCTCCACATGGCCT | + |
Preference number: 5 (lower is better) Translates to: PTLNVSSASFLHSPLAKHRLPSF*YTSTWP Trigger: AGGCCATGTGGAGGTATACAAGAAAGATGGCAGCCT...GTGTTTAGCCAGGGGGCTATGGAGAAATGAGGCTGAAGAGACATTTAAGGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | TTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCTGTGTCTCACACACACACTTCTGACCCTACAAAATaGCCCTGGGGGCTGGTGGTT | + |
Preference number: 5 (lower is better) Translates to: LNFHLDFIPKAPVSHTHTSDPTK*PWGLVV Trigger: AACCACCAGCCCCCAGGGCAATTTTGTAGGGTCAGA...AGTGTGTGTGTGAGACACAGGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | ATCTGGACATTGGTGATTCCCTACATTGGTTTCTACAAACAGGGAATTCTGTCCAGGCATGGCAGAGTCTaGGGTGTGTGTAACTGCTCC | + |
Preference number: 5 (lower is better) Translates to: IWTLVIPYIGFYKQGILSRHGRV*GVCNCS Trigger: GGAGCAGTTACACACACCCAAGACTCTGCCATGCCT...GGACAGAATTCCCTGTTTGTAGAAACCAATGTAGGGAATCACCAATGTCCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | AGATGTCCCTTCTCTATCCTTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCTCCCGAGAAACAGACTaGCCTCTGCCTTTGCACTTC | + |
Preference number: 5 (lower is better) Translates to: RCPFSILKLPSGLYSKGPSRETD*PLPLHF Trigger: GAAGTGCAAAGGCAGAGGCAAGTCTGTTTCTCGGGA...GGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAAGGATAGAGAAGGGACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | AGATGTCCCTTCTCTATCCTTAAACTTCCATCTGGACTTTATTCCAAAGGCCCCGACACCACCAAGTACTaGCCGTCTACCATGGTGGTT | + |
Preference number: 5 (lower is better) Translates to: RCPFSILKLPSGLYSKGPDTTKY*PSTMVV Trigger: AACCACCATGGTAGACGGCAAGTACTTGGTGGTGTC...GGGGCCTTTGGAATAAAGTCCAGATGGAAGTTTAAGGATAGAGAAGGGACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | TATCAAGTAAGCACTCTACCAGTGAGCCACTCACTGGGGAATTCTAGGCAGGCTAGATCCAAGAGCCCATaGACAAAGAAGTTGGTCTTA | + |
Preference number: 5 (lower is better) Translates to: YQVSTLPVSHSLGNSRQARSKSP*TKKLVL Trigger: TAAGACCAACTTCTTTGTCAATGGGCTCTTGGATCT...AGCCTGCCTAGAATTCCCCAGTGAGTGGCTCACTGGTAGAGTGCTTACTTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGTGGTCTTTGCCTTCTTaGGGAGTCAGGGGCTGGGCT | + |
Preference number: 5 (lower is better) Translates to: LHVSSEHICNFYLWRMPVWSLPS*GVRGWA Trigger: AGCCCAGCCCCTGACTCCCAAAGAAGGCAAAGACCA...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | TGTCTCTTTAGCATTTGGGGGATTCGCTTTCAGAATCAGGAGATTCCTCCCTCTGACTTGCCTCTGCCTTaGCACTTCTTCTTCTTGTTA | + |
Preference number: 5 (lower is better) Translates to: CLFSIWGIRFQNQEIPPSDLPLP*HFFFLL Trigger: TAACAAGAAGAAGAAGTGCAAAGGCAGAGGCAAGTC...AGAGGGAGGAATCTCCTGATTCTGAAAGCGAATCCCCCAAATGCTAAAGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | TCATTGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATTTGGACGCTGTCCTTCGGGGATaGTTTAGGCTCCTCAAAGAT | + |
Preference number: 5 (lower is better) Translates to: SLTIYRLGIHCLPGNYLDAVLRG*FRLLKD Trigger: ATCTTTGAGGAGCCTAAACAATCCCCGAAGGACAGC...GTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | CTACATGTTTCTTCAGAACACATCTGTAACTTTTATCTTTGGCGTATGCCAGTGACATGGATGGTCCCATaGCTAAGTGACACCACCAAG | + |
Preference number: 5 (lower is better) Translates to: LHVSSEHICNFYLWRMPVTWMVP*LSDTTK Trigger: CTTGGTGGTGTCACTTAGCAATGGGACCATCCATGT...CACTGGCATACGCCAAAGATAAAAGTTACAGATGTGTTCTGAAGAAACATGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS-3UTR CAA 90 bp | TCATTGACTATTTACAGATTGGGAATCCATTGTCTGCCTGGCAACTATTTGGACTTGCACTTCTTCTTCTaGTTAGGCCTGTTACCCCTT | + |
Preference number: 5 (lower is better) Translates to: SLTIYRLGIHCLPGNYLDLHFFF*LGLLPL Trigger: AAGGGGTAACAGGCCTAACAAGAAGAAGAAGTGCAA...GTCCAAATAGTTGCCAGGCAGACAATGGATTCCCAATCTGTAAATAGTCAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 72 bp | CCAGGCACCTGGCTGTGGCGGGTCCCCCAGAGCTCTTaGCTCCCACCAGAGGGCACAGAGCGCAAGTTGGCT | + |
Preference number: 6 (lower is better) Translates to: PGTWLWRVPQSS*LPPEGTERKLA Trigger: AGCCAACTTGCGCTCTGTGCCCTCTGGTGGGAGGCAAGAGCTCTGGGGGACCCGCCACAGCCAGGTGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CCA 72 bp | CGGAGCAGGTGGCAGTTCTTGTCCTCGAGCCCGGGATaGAGCTCTAGCTGGGGCAGCACACAGCGGGTGGGC | + |
Preference number: 6 (lower is better) Translates to: RSRWQFLSSSPG*SSSWGSTQRVG Trigger: GCCCACCCGCTGTGTGCTGCCCCAGCTAGAGCTCCATCCCGGGCTCGAGGACAAGAACTGCCACCTGCTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | GCTACTCGGTCTCCACATGGCATTGCGGCCACGGCGTaGCTGGACTGGGTGAGGCTCAGGGACCTGCGCCAC | + |
Preference number: 6 (lower is better) Translates to: ATRSPHGIAATA*LDWVRLRDLRH Trigger: GTGGCGCAGGTCCCTGAGCCTCACCCAGTCCAGCCACGCCGTGGCCGCAATGCCATGTGGAGACCGAGTAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 72 bp | ACACAGCGGGTGGGCCCAGACGTCCAGGGAGCATCCTaGAGCTGGCGCAGGCGCTGTGTGATTGCTCCCTCC | + |
Preference number: 6 (lower is better) Translates to: TQRVGPDVQGAS*SWRRRCVIAPS Trigger: GGAGGGAGCAATCACACAGCGCCTGCGCCAGCTTCAGGATGCTCCCTGGACGTCTGGGCCCACCCGCTGTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | GTCTGCCGGGAGCAGCGATGCCCATCGGCACAGGCCTaGCATAAGTCGTCGGCACAGTCCAGGCACCTGGCT | + |
Preference number: 6 (lower is better) Translates to: VCREQRCPSAQA*HKSSAQSRHLA Trigger: AGCCAGGTGCCTGGACTGTGCCGACGACTTATGCCAGGCCTGTGCCGATGGGCATCGCTGCTCCCGGCAGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CCA 72 bp | CAGTTCTTGTCCTCGAGCCCGGGATGGAGCTCTAGCTaGGGCAGCACACAGCGGGTGGGCCCAGACGTCCAG | + |
Preference number: 6 (lower is better) Translates to: QFLSSSPGWSSS*GSTQRVGPDVQ Trigger: CTGGACGTCTGGGCCCACCCGCTGTGTGCTGCCCCAGCTAGAGCTCCATCCCGGGCTCGAGGACAAGAACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | TCGGCACAGTCCAGGCACCTGGCTGTGGCGGGTCCCCCAGAGCTCTaGCCTCCCACCAGAGGGCACAGAGCGCAAGTTGGCTTCCCTGAA | + |
Preference number: 6 (lower is better) Translates to: SAQSRHLAVAGPPEL*PPTRGHRAQVGFPE Trigger: TTCAGGGAAGCCAACTTGCGCTCTGTGCCCTCTGGTGGGAGGCAAGAGCTCTGGGGGACCCGCCACAGCCAGGTGCCTGGACTGTGCCGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS GCA 72 bp | CAGAGAAAGCCACTGCATTCTGCAGGGCAGCCACGCTaGACGGGGAACAGCCCTCGGGGACCTGCACTGTGC | + |
Preference number: 6 (lower is better) Translates to: QRKPLHSAGQPR*TGNSPRGPALC Trigger: GCACAGTGCAGGTCCCCGAGGGCTGTTCCCCGTGCAGCGTGGCTGCCCTGCAGAATGCAGTGGCTTTCTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | GCCGCCGCCTTGGCCACCTGCTCCTGGCGCTCTATTTaGGTCAACCTCTCCCTGGTAGCCTCCTCAGCAGCC | + |
Preference number: 6 (lower is better) Translates to: AAALATCSWRSI*VNLSLVASSAA Trigger: GGCTGCTGAGGAGGCTACCAGGGAGAGGTTGACCAAAATAGAGCGCCAGGAGCAGGTGGCCAAGGCGGCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | GTTAGGAACACCAGTGCCCGCTGGCCCCGGCTAGCCTaGCCTCCAGGGATAAAGCGGGTAGCCAGGCTGCCA | + |
Preference number: 6 (lower is better) Translates to: VRNTSARWPRLA*PPGIKRVARLP Trigger: TGGCAGCCTGGCTACCCGCTTTATCCCTGGAGGCAAGGCTAGCCGGGGCCAGCGGGCACTGGTGTTCCTAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 72 bp | ACGACACGGTGCTTATGGGTCTGCCGGGAGCAGCGATaGCCATCGGCACAGGCCTGGCATAAGTCGTCGGCA | + |
Preference number: 6 (lower is better) Translates to: TTRCLWVCREQR*PSAQAWHKSSA Trigger: TGCCGACGACTTATGCCAGGCCTGTGCCGATGGGCATCGCTGCTCCCGGCAGACCCATAAGCACCGTGTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS GCA 72 bp | ACTCGACGGGCAAAGGCAGCCGCCGCCTTGGCCACCTaGTCCTGGCGCTCTATTTTGGTCAACCTCTCCCTG | + |
Preference number: 6 (lower is better) Translates to: TRRAKAAAALAT*SWRSILVNLSL Trigger: CAGGGAGAGGTTGACCAAAATAGAGCGCCAGGAGCAGGTGGCCAAGGCGGCGGCTGCCTTTGCCCGTCGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 72 bp | TGCCACACTGACAGCTACTCGGTCTCCACATGGCATTaGGGCCACGGCGTGGCTGGACTGGGTGAGGCTCAG | + |
Preference number: 6 (lower is better) Translates to: CHTDSYSVSTWH*GHGVAGLGEAQ Trigger: CTGAGCCTCACCCAGTCCAGCCACGCCGTGGCCGCAATGCCATGTGGAGACCGAGTAGCTGTCAGTGTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | TTCGTTCAGCTGCCTCCTCCACCTGAGTCCCCACACTaGCTGCCTGCTCCCGAAGCAAGGCCAGGGCTTCCT | + |
Preference number: 6 (lower is better) Translates to: FVQLPPPPESPH*LPAPEARPGLP Trigger: AGGAAGCCCTGGCCTTGCTTCGGGAGCAGGCAGCCAGTGTGGGGACTCAGGTGGAGGAGGCAGCTGAACGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | ATGGCCTGCCACACTGACAGCTACTCGGTCTCCACATaGCATTGCGGCCACGGCGTGGCTGGACTGGGTGAG | + |
Preference number: 6 (lower is better) Translates to: MACHTDSYSVST*HCGHGVAGLGE Trigger: CTCACCCAGTCCAGCCACGCCGTGGCCGCAATGCCATGTGGAGACCGAGTAGCTGTCAGTGTGGCAGGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | GGGCTGGTGGTTAGGAACACCAGTGCCCGCTGGCCCCGGCTAGCCTaGCCTCCAGGGATAAAGCGGGTAGCCAGGCTGCCATCTTTCTTG | + |
Preference number: 6 (lower is better) Translates to: GLVVRNTSARWPRLA*PPGIKRVARLPSFL Trigger: CAAGAAAGATGGCAGCCTGGCTACCCGCTTTATCCCTGGAGGCAAGGCTAGCCGGGGCCAGCGGGCACTGGTGTTCCTAACCACCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | TCTAGACCCAAGCTGAGCACTCGACGGGCAAAGGCAGCCGCCGCCTaGGCCACCTGCTCCTGGCGCTCTATTTTGGTCAACCTCTCCCTG | + |
Preference number: 6 (lower is better) Translates to: SRPKLSTRRAKAAAA*ATCSWRSILVNLSL Trigger: CAGGGAGAGGTTGACCAAAATAGAGCGCCAGGAGCAGGTGGCCAAGGCGGCGGCTGCCTTTGCCCGTCGAGTGCTCAGCTTGGGTCTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 72 bp | ACAGGCACAATCTCCCGACACTCGGGGCAGCGGACCTaGCCACCGATGTCCAGTTGTGCCAGACAGTCCTGG | + |
Preference number: 6 (lower is better) Translates to: TGTISRHSGQRT*PPMSSCARQSW Trigger: CCAGGACTGTCTGGCACAACTGGACATCGGTGGTCAGGTCCGCTGCCCCGAGTGTCGGGAGATTGTGCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CCA 72 bp | GGAGGAGGCCGGAACCTTCTAGGTTTGGCCTCAGGATaGGGCTGGGCTCCCGAGAAACAGACTTGCCTCTGC | + |
Preference number: 6 (lower is better) Translates to: GGGRNLLGLASG*GWAPEKQTCLC Trigger: GCAGAGGCAAGTCTGTTTCTCGGGAGCCCAGCCCCATCCTGAGGCCAAACCTAGAAGGTTCCGGCCTCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | AAGCTGAGCACTCGACGGGCAAAGGCAGCCGCCGCCTaGGCCACCTGCTCCTGGCGCTCTATTTTGGTCAAC | + |
Preference number: 6 (lower is better) Translates to: KLSTRRAKAAAA*ATCSWRSILVN Trigger: GTTGACCAAAATAGAGCGCCAGGAGCAGGTGGCCAAGGCGGCGGCTGCCTTTGCCCGTCGAGTGCTCAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | GGCTCCTCAAAGATGAGTCGGAGCAGGTGGCAGTTCTaGTCCTCGAGCCCGGGATGGAGCTCTAGCTGGGGC | + |
Preference number: 6 (lower is better) Translates to: GSSKMSRSRWQF*SSSPGWSSSWG Trigger: GCCCCAGCTAGAGCTCCATCCCGGGCTCGAGGACAAGAACTGCCACCTGCTCCGACTCATCTTTGAGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 72 bp | TCCAGGGAGCATCCTGAAGCTGGCGCAGGCGCTGTGTaGTTGCTCCCTCCAGCGAAAGGATCTCGGCCTCTA | + |
Preference number: 6 (lower is better) Translates to: SREHPEAGAGAV*LLPPAKGSRPL Trigger: TAGAGGCCGAGATCCTTTCGCTGGAGGGAGCAATCACACAGCGCCTGCGCCAGCTTCAGGATGCTCCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | GGTACCAGCCCCACCCTTCCCGCTGTCCTTCGGGGATaGTTTAGGCTCCTCAAAGATGAGTCGGAGCAGGTG | + |
Preference number: 6 (lower is better) Translates to: GTSPTLPAVLRG*FRLLKDESEQV Trigger: CACCTGCTCCGACTCATCTTTGAGGAGCCTAAACAATCCCCGAAGGACAGCGGGAAGGGTGGGGCTGGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | CCCTCCTTGGGTACCAGCCCCACCCTTCCCGCTGTCCTTCGGGGATaGTTTAGGCTCCTCAAAGATGAGTCGGAGCAGGTGGCAGTTCTT | + |
Preference number: 6 (lower is better) Translates to: PSLGTSPTLPAVLRG*FRLLKDESEQVAVL Trigger: AAGAACTGCCACCTGCTCCGACTCATCTTTGAGGAGCCTAAACAATCCCCGAAGGACAGCGGGAAGGGTGGGGCTGGTACCCAAGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | TGGACGTCTCCGGGAGCTCTGGCCTTGACAAGATCCAAGAGCCCATaGACAAAGAAGTTGGTCTTAAAGGCGGCCACCCCTTCGGCGGGT | + |
Preference number: 6 (lower is better) Translates to: WTSPGALALTRSKSP*TKKLVLKAATPSAG Trigger: ACCCGCCGAAGGGGTGGCCGCCTTTAAGACCAACTTCTTTGTCAATGGGCTCTTGGATCTTGTCAAGGCCAGAGCTCCCGGAGACGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CAA 90 bp | GATTGTTTAGGCTCCTCAAAGATGAGTCGGAGCAGGTGGCAGTTCTaGTCCTCGAGCCCGGGATGGAGCTCTAGCTGGGGCAGCACACAG | + |
Preference number: 6 (lower is better) Translates to: DCLGSSKMSRSRWQF*SSSPGWSSSWGSTQ Trigger: CTGTGTGCTGCCCCAGCTAGAGCTCCATCCCGGGCTCGAGGACAAGAACTGCCACCTGCTCCGACTCATCTTTGAGGAGCCTAAACAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | GAAGCAAGGCCAGGGCTTCCTTTTCTGCCACCCGAGTaGCTTCTAGCTCCACCAGATTGCTGTCCACACCTG | + |
Preference number: 6 (lower is better) Translates to: EARPGLPFLPPE*LLAPPDCCPHL Trigger: CAGGTGTGGACAGCAATCTGGTGGAGCTAGAAGCCACTCGGGTGGCAGAAAAGGAAGCCCTGGCCTTGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | AGGGCTTCCTTTTCTGCCACCCGAGTGGCTTCTAGCTCCACCAGATaGCTGTCCACACCTGCCAATAACTCCTCAAGGCCTGGCTTCCTG | + |
Preference number: 6 (lower is better) Translates to: RASFSATRVASSSTR*LSTPANNSSRPGFL Trigger: CAGGAAGCCAGGCCTTGAGGAGTTATTGGCAGGTGTGGACAGCAATCTGGTGGAGCTAGAAGCCACTCGGGTGGCAGAAAAGGAAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | GCCTTGCCTCCAGGGATAAAGCGGGTAGCCAGGCTGCCATCTTTCTaGTATACCTCCACATGGCCTGCCACACTGACAGCTACTCGGTCT | + |
Preference number: 6 (lower is better) Translates to: ALPPGIKRVARLPSF*YTSTWPATLTATRS Trigger: AGACCGAGTAGCTGTCAGTGTGGCAGGCCATGTGGAGGTATACAAGAAAGATGGCAGCCTGGCTACCCGCTTTATCCCTGGAGGCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | CATCATCTTCTTGGGGGTTCTGGTCTTTGCCTTCTTTaGGAGTCAGGGGCTGGGCTCCACCCTGCTTCCCTA | + |
Preference number: 6 (lower is better) Translates to: HHLLGGSGLCLL*ESGAGLHPASL Trigger: TAGGGAAGCAGGGTGGAGCCCAGCCCCTGACTCCCAAAGAAGGCAAAGACCAGAACCCCCAAGAAGATGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | GGAGCTCTGGCCTTGACAAGATCCAAGAGCCCATTGACAAAGAAGTaGGTCTTAAAGGCGGCCACCCCTTCGGCGGGTACAGGCACAATC | + |
Preference number: 6 (lower is better) Translates to: GALALTRSKSPLTKK*VLKAATPSAGTGTI Trigger: GATTGTGCCTGTACCCGCCGAAGGGGTGGCCGCCTTTAAGACCAACTTCTTTGTCAATGGGCTCTTGGATCTTGTCAAGGCCAGAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS GCA 72 bp | AGGGGTGATCGATATGGGGACCCAGGCGGCAATCCTTaGAGAGCAACTGAGAACAAGGTTGACAGAGGAAGC | + |
Preference number: 6 (lower is better) Translates to: RGDRYGDPGGNP*RATENKVDRGS Trigger: GCTTCCTCTGTCAACCTTGTTCTCAGTTGCTCTGCAAGGATTGCCGCCTGGGTCCCCATATCGATCACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS GCA 72 bp | TTTCTGCCACCCGAGTGGCTTCTAGCTCCACCAGATTaGTGTCCACACCTGCCAATAACTCCTCAAGGCCTG | + |
Preference number: 6 (lower is better) Translates to: FLPPEWLLAPPD*CPHLPITPQGL Trigger: CAGGCCTTGAGGAGTTATTGGCAGGTGTGGACAGCAATCTGGTGGAGCTAGAAGCCACTCGGGTGGCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | GATTGTTTAGGCTCCTCAAAGATGAGTCGGAGCAGGTaGCAGTTCTTGTCCTCGAGCCCGGGATGGAGCTCT | + |
Preference number: 6 (lower is better) Translates to: DCLGSSKMSRSR*QFLSSSPGWSS Trigger: AGAGCTCCATCCCGGGCTCGAGGACAAGAACTGCCACCTGCTCCGACTCATCTTTGAGGAGCCTAAACAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | CCGGGAGCTCTGGCCTTGACAAGATCCAAGAGCCCATaGACAAAGAAGTTGGTCTTAAAGGCGGCCACCCCT | + |
Preference number: 6 (lower is better) Translates to: PGALALTRSKSP*TKKLVLKAATP Trigger: AGGGGTGGCCGCCTTTAAGACCAACTTCTTTGTCAATGGGCTCTTGGATCTTGTCAAGGCCAGAGCTCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CAA 72 bp | CCAGGGATAAAGCGGGTAGCCAGGCTGCCATCTTTCTaGTATACCTCCACATGGCCTGCCACACTGACAGCT | + |
Preference number: 6 (lower is better) Translates to: PGIKRVARLPSF*YTSTWPATLTA Trigger: AGCTGTCAGTGTGGCAGGCCATGTGGAGGTATACAAGAAAGATGGCAGCCTGGCTACCCGCTTTATCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | TCTAGGTTTGGCCTCAGGATGGGGCTGGGCTCCCGAGAAACAGACTaGCCTCTGCCTTTGCACTTCTTCTTCTTGTTAGGCCTGTTACCC | + |
Preference number: 6 (lower is better) Translates to: SRFGLRMGLGSRETD*PLPLHFFFLLGLLP Trigger: GGGTAACAGGCCTAACAAGAAGAAGAAGTGCAAAGGCAGAGGCAAGTCTGTTTCTCGGGAGCCCAGCCCCATCCTGAGGCCAAACCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 72 bp | CATCTTTCTTGTATACCTCCACATGGCCTGCCACACTaGCAGCTACTCGGTCTCCACATGGCATTGCGGCCA | + |
Preference number: 6 (lower is better) Translates to: HLSCIPPHGLPH*QLLGLHMALRP Trigger: TGGCCGCAATGCCATGTGGAGACCGAGTAGCTGTCAGTGTGGCAGGCCATGTGGAGGTATACAAGAAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 72 bp | CAGGCTGCCATCTTTCTTGTATACCTCCACATGGCCTaGCACACTGACAGCTACTCGGTCTCCACATGGCAT | + |
Preference number: 6 (lower is better) Translates to: QAAIFLVYLHMA*HTDSYSVSTWH Trigger: ATGCCATGTGGAGACCGAGTAGCTGTCAGTGTGGCAGGCCATGTGGAGGTATACAAGAAAGATGGCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | GTAGCCAGGCTGCCATCTTTCTTGTATACCTCCACATaGCCTGCCACACTGACAGCTACTCGGTCTCCACAT | + |
Preference number: 6 (lower is better) Translates to: VARLPSFLYTST*PATLTATRSPH Trigger: ATGTGGAGACCGAGTAGCTGTCAGTGTGGCAGGCCATGTGGAGGTATACAAGAAAGATGGCAGCCTGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CCA 72 bp | TCTACCATGGTGGTTACCCGGGGCTTTTCCAGGCCATaGTATGCTGTTAGGAAGTCACCAAGAAGTGACCCC | + |
Preference number: 6 (lower is better) Translates to: STMVVTRGFSRP*YAVRKSPRSDP Trigger: GGGGTCACTTCTTGGTGACTTCCTAACAGCATACCATGGCCTGGAAAAGCCCCGGGTAACCACCATGGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | GCCTTGACAAGATCCAAGAGCCCATTGACAAAGAAGTaGGTCTTAAAGGCGGCCACCCCTTCGGCGGGTACA | + |
Preference number: 6 (lower is better) Translates to: ALTRSKSPLTKK*VLKAATPSAGT Trigger: TGTACCCGCCGAAGGGGTGGCCGCCTTTAAGACCAACTTCTTTGTCAATGGGCTCTTGGATCTTGTCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CAA 72 bp | GGCTTCCCTGAATGGACGTCTCCGGGAGCTCTGGCCTaGACAAGATCCAAGAGCCCATTGACAAAGAAGTTG | + |
Preference number: 6 (lower is better) Translates to: GFPEWTSPGALA*TRSKSPLTKKL Trigger: CAACTTCTTTGTCAATGGGCTCTTGGATCTTGTCAAGGCCAGAGCTCCCGGAGACGTCCATTCAGGGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CAA 72 bp | TTTTCTGCCACCCGAGTGGCTTCTAGCTCCACCAGATaGCTGTCCACACCTGCCAATAACTCCTCAAGGCCT | + |
Preference number: 6 (lower is better) Translates to: FSATRVASSSTR*LSTPANNSSRP Trigger: AGGCCTTGAGGAGTTATTGGCAGGTGTGGACAGCAATCTGGTGGAGCTAGAAGCCACTCGGGTGGCAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | TGGATGGTCCCATTGCTAAGTGACACCACCAAGTACTaGCCGTCTACCATGGTGGTTACCCGGGGCTTTTCC | + |
Preference number: 6 (lower is better) Translates to: WMVPLLSDTTKY*PSTMVVTRGFS Trigger: GGAAAAGCCCCGGGTAACCACCATGGTAGACGGCAAGTACTTGGTGGTGTCACTTAGCAATGGGACCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | CTAAAGACATGGATGGTCCCATTGCTAAGTGACACCACCAAGTACTaGCCGTCTACCATGGTGGTTACCCGGGGCTTTTCCAGGCCATGG | + |
Preference number: 6 (lower is better) Translates to: LKTWMVPLLSDTTKY*PSTMVVTRGFSRPW Trigger: CCATGGCCTGGAAAAGCCCCGGGTAACCACCATGGTAGACGGCAAGTACTTGGTGGTGTCACTTAGCAATGGGACCATCCATGTCTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | GCGCAAGTTGGCTTCCCTGAATGGACGTCTCCGGGAGCTCTGGCCTaGACAAGATCCAAGAGCCCATTGACAAAGAAGTTGGTCTTAAAG | + |
Preference number: 6 (lower is better) Translates to: AQVGFPEWTSPGALA*TRSKSPLTKKLVLK Trigger: CTTTAAGACCAACTTCTTTGTCAATGGGCTCTTGGATCTTGTCAAGGCCAGAGCTCCCGGAGACGTCCATTCAGGGAAGCCAACTTGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054384.6 ENSMUST00000152207.2 |
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CDS CAA 90 bp | TCCAGGCCATGGTATGCTGTTAGGAAGTCACCAAGAAGTGACCCCTaGGGATCCAGTATCACCACCTTGTTTACCTCTCGAAGGGTCAGA | + |
Preference number: 6 (lower is better) Translates to: SRPWYAVRKSPRSDP*GSSITTLFTSRRVR Trigger: TCTGACCCTTCGAGAGGTAAACAAGGTGGTGATACTGGATCCCAAGGGGTCACTTCTTGGTGACTTCCTAACAGCATACCATGGCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 72 bp | CCTGACCCTAAAGACATGGATGGTCCCATTGCTAAGTaGCACCACCAAGTACTTGCCGTCTACCATGGTGGT | + |
Preference number: 6 (lower is better) Translates to: PDPKDMDGPIAK*HHQVLAVYHGG Trigger: ACCACCATGGTAGACGGCAAGTACTTGGTGGTGTCACTTAGCAATGGGACCATCCATGTCTTTAGGGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 90 bp | GGCTCCCGAGAAACAGACTTGCCTCTGCCTTTGCACTTCTTCTTCTaGTTAGGCCTGTTACCCCTTTCGATGAAGACCCCATCATCTTCT | + |
Preference number: 6 (lower is better) Translates to: GSRETDLPLPLHFFF*LGLLPLSMKTPSSS Trigger: AGAAGATGATGGGGTCTTCATCGAAAGGGGTAACAGGCCTAACAAGAAGAAGAAGTGCAAAGGCAGAGGCAAGTCTGTTTCTCGGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS TCA 72 bp | TCAGGGACCTGCGCCACTGAATTTCTCCGTCAGGACTaGCAAGATAGAGTTTTGCATTGGCAGAGAAAGCCA | + |
Preference number: 6 (lower is better) Translates to: SGTCATEFLRQD*QDRVLHWQRKP Trigger: TGGCTTTCTCTGCCAATGCAAAACTCTATCTTGTCAGTCCTGACGGAGAAATTCAGTGGCGCAGGTCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | TCAGGAAACCTGACCCTAAAGACATGGATGGTCCCATaGCTAAGTGACACCACCAAGTACTTGCCGTCTACC | + |
Preference number: 6 (lower is better) Translates to: SGNLTLKTWMVP*LSDTTKYLPST Trigger: GGTAGACGGCAAGTACTTGGTGGTGTCACTTAGCAATGGGACCATCCATGTCTTTAGGGTCAGGTTTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS GCA 72 bp | CTGAATTTCTCCGTCAGGACTGACAAGATAGAGTTTTaGATTGGCAGAGAAAGCCACTGCATTCTGCAGGGC | + |
Preference number: 6 (lower is better) Translates to: LNFSVRTDKIEF*IGRESHCILQG Trigger: GCCCTGCAGAATGCAGTGGCTTTCTCTGCCAATGCAAAACTCTATCTTGTCAGTCCTGACGGAGAAATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |
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CDS CAA 72 bp | GAAACAGACTTGCCTCTGCCTTTGCACTTCTTCTTCTaGTTAGGCCTGTTACCCCTTTCGATGAAGACCCCA | + |
Preference number: 6 (lower is better) Translates to: ETDLPLPLHFFF*LGLLPLSMKTP Trigger: TGGGGTCTTCATCGAAAGGGGTAACAGGCCTAACAAGAAGAAGAAGTGCAAAGGCAGAGGCAAGTCTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054384.6 |