Pregenerated sensors for TRIM55 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060913Ensembl transcript IDs: ENSMUST00000029139.9
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGTCCCCTTCATATGAATCGTGGTGAATTTCCACCTGTTTCCTaGTGCCTATGTGCTTCTCAGCCAGGCAGACAGGGGGCAGCAACG | + |
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Preference number: 1 (lower is better) Translates to: RGPLHMNRGEFPPVS*CLCASQPGRQGAAT Trigger: CGTTGCTGCCCCCTGTCTGCCTGGCTGAGAAGCACATAGGCAGCAGGAAACAGGTGGAAATTCACCACGATTCATATGAAGGGGACCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR GCA 90 bp | TTCTGGACTATGGACGTGTGGCCACATGTAAAGGAAAGTCCTGTCTaGGCACCCATGGCATCCATAGGGAAAGGAACCTCTACAGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: FWTMDVWPHVKESPV*APMASIGKGTSTVP Trigger: GGGCACTGTAGAGGTTCCTTTCCCTATGGATGCCATGGGTGCGCAGACAGGACTTTCCTTTACATGTGGCCACACGTCCATAGTCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR TCA 90 bp | GCATGCACCACACCTACACAACCTTCAGAAGGTTTCTCACACAAATaGAAGATTTGCAGAAGATCAAGTTTCTTCAGAAGAGTATTTTCT | + |
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Preference number: 1 (lower is better) Translates to: ACTTPTQPSEGFSHK*KICRRSSFFRRVFS Trigger: AGAAAATACTCTTCTGAAGAAACTTGATCTTCTGCAAATCTTTCATTTGTGTGAGAAACCTTCTGAAGGTTGTGTAGGTGTGGTGCATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR-3UTR GCA 90 bp | CGTCCTAAAATAACCAGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTCCACCTGTTTCCTGCTaGCTATGTGCTTCTCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RPKITRSLREAGRVFCHFPPVSC*LCASQP Trigger: TGGCTGAGAAGCACATAGGCAGCAGGAAACAGGTGG...AAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCTGGTTATTTTAGGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACAAGGAAAGTCCTGTCTaGGCACCCATGGCATCCATA | + |
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Preference number: 2 (lower is better) Translates to: VKRVALDFWPSGLWTCGHKESPV*APMASI Trigger: TATGGATGCCATGGGTGCGCAGACAGGACTTTCCTT...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCAGCTGATACACAGGCATaGACCACACCTACACAACCT | + |
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Preference number: 2 (lower is better) Translates to: CQKSCPRFLAFWTMDVWPADTQA*TTPTQP Trigger: AGGTTGTGTAGGTGTGGTGCATGCCTGTGTATCAGC...TGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR-3UTR TCA 90 bp | CGTCCTAAAATAACCAGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTGGTTTCTCACACAAATaGAAGATTTGCAGAAGATCA | + |
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Preference number: 2 (lower is better) Translates to: RPKITRSLREAGRVFCHFGFSHK*KICRRS Trigger: TGATCTTCTGCAAATCTTTCATTTGTGTGAGAAACC...AAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCTGGTTATTTTAGGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR-3UTR CCA 90 bp | GACCAATCTCCATATTTTGATAAATCGGTCAGTTTGGAACTGACACTGAACATCAAGCCTGAGGGAGGCTaGGAGAGTGTTCTGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: DQSPYFDKSVSLELTLNIKPEGG*ESVLPL Trigger: AAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTT...GATGTTCAGTGTCAGTTCCAAACTGACCGATTTATCAAAATATGGAGATTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR-3UTR GCA 90 bp | AGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGTAGACAGCTCCTCTTTTCCACCTGTTTCCTaGTGCCTATGTGCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RLSDCCYGRTLKKVDSSSFPPVS*CLCASQ Trigger: CTGAGAAGCACATAGGCAGCAGGAAACAGGTGGAAA...AGAGGAGCTGTCTACTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGACACTGAACATCACCTACCACCTGCAATGCTAAGGAGAAAAGCAAAAGGCGGAATTAAAGGGTGGTaGTGTTGTATTGTTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: TDTEHHLPPAMLRRKAKGGIKGW*CCIVLF Trigger: AAACAAAACAATACAACACCACCACCCTTTAATTCC...GCCTTTTGCTTTTCTCCTTAGCATTGCAGGTGGTAGGTGATGTTCAGTGTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR GCA 72 bp | ATGGACGTGTGGCCACATGTAAAGGAAAGTCCTGTCTaGGCACCCATGGCATCCATAGGGAAAGGAACCTCT | + |
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Preference number: 3 (lower is better) Translates to: MDVWPHVKESPV*APMASIGKGTS Trigger: AGAGGTTCCTTTCCCTATGGATGCCATGGGTGCGCAGACAGGACTTTCCTTTACATGTGGCCACACGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR CCA 72 bp | GAGGCTGGGAGAGTGTTCTGCCACTTTGTTACCACTTaGCACTTATGGCTGATACACAGGCATGCACCACAC | + |
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Preference number: 3 (lower is better) Translates to: EAGRVFCHFVTT*HLWLIHRHAPH Trigger: GTGTGGTGCATGCCTGTGTATCAGCCATAAGTGCCAAGTGGTAACAAAGTGGCAGAACACTCTCCCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR CCA 72 bp | TGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTaGCCACATGTAAAGGAAAGTCCTGTCTGCGCACCC | + |
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Preference number: 3 (lower is better) Translates to: CPRFLAFWTMDV*PHVKESPVCAP Trigger: GGGTGCGCAGACAGGACTTTCCTTTACATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR TCA 72 bp | AATCCTGTCCAGAGGTCCCCTTCATATGAATCGTGGTaGATTTCCACCTGTTTCCTGCTGCCTATGTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: NPVQRSPSYESW*ISTCFLLPMCF Trigger: GAAGCACATAGGCAGCAGGAAACAGGTGGAAATTCACCACGATTCATATGAAGGGGACCTCTGGACAGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR TCA 72 bp | TGCTTTCAGAAATCCTGTCCAGAGGTCCCCTTCATATaGATCGTGGTGAATTTCCACCTGTTTCCTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: CFQKSCPEVPFI*IVVNFHLFPAA Trigger: GGCAGCAGGAAACAGGTGGAAATTCACCACGATTCATATGAAGGGGACCTCTGGACAGGATTTCTGAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR GCA 72 bp | TGTTACCACTTGGCACTTATGGCTGATACACAGGCATaGACCACACCTACACAACCTTCAGAAGGTTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: CYHLALMADTQA*TTPTQPSEGFS Trigger: TGAGAAACCTTCTGAAGGTTGTGTAGGTGTGGTGCATGCCTGTGTATCAGCCATAAGTGCCAAGTGGTAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR GCA 72 bp | AAATCCATGCAGTTGCTCCACAGATTATCAGATTGCTaGTATGGCAGGACACTTAAGAAAGTAGACAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: KSMQLLHRLSDC*YGRTLKKVDSS Trigger: GGAGCTGTCTACTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCATGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR GCA 72 bp | CTTAAATCCATGCAGTTGCTCCACAGATTATCAGATTaGTGCTATGGCAGGACACTTAAGAAAGTAGACAGC | + |
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Preference number: 3 (lower is better) Translates to: LKSMQLLHRLSD*CYGRTLKKVDS Trigger: GCTGTCTACTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCATGGATTTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR GCA 72 bp | CACACAGGGGGAGAATTGTGTGTATACTTAAATCCATaGAGTTGCTCCACAGATTATCAGATTGCTGCTATG | + |
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Preference number: 3 (lower is better) Translates to: HTGGELCVYLNP*SCSTDYQIAAM Trigger: CATAGCAGCAATCTGATAATCTGTGGAGCAACTGCATGGATTTAAGTATACACACAATTCTCCCCCTGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR CCA 72 bp | AAATGTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTaGACTATGGACGTGTGGCCACATGTAAAGGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: KCQKSCPRFLAF*TMDVWPHVKES Trigger: ACTTTCCTTTACATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | AGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTGTTACCACTTGGCACGTCAGGGGAGCCACCTaGCAGTCCTTATGGGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RSLREAGRVFCHFVTTWHVRGAT*QSLWAP Trigger: TGGCGCCCATAAGGACTGCCAGGTGGCTCCCCTGAC...GTGCCAAGTGGTAACAAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACAGCTCTGCGGGAAGCTaGGAGGGCTCTGCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VKRVALDFWPSGLWTCGHSSAGS*EGSAAF Trigger: GAAAGCTGCAGAGCCCTCTCAGCTTCCCGCAGAGCT...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | CAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGACTGTGTGGTCTGCTaGGAGCCAATGGGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: QKSCPRFLAFWTMDVWPHDCVVC*EPMGTT Trigger: GGTGGTGCCCATTGGCTCTCAGCAGACCACACAGTC...ATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACCAGGTGTCCTCCAGCTaGCTGATCACACCCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: VKRVALDFWPSGLWTCGHQVSSS*LITPWT Trigger: AGTCCAGGGTGTGATCAGCCAGCTGGAGGACACCTG...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACGGGCGCCAAAAACCTTaGACAAGGAACAGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VKRVALDFWPSGLWTCGHGRQKP*TRNRWA Trigger: TGCCCACCTGTTCCTTGTGCAAGGTTTTTGGCGCCC...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | ACTGACACTGAACATCACCTACCACCTGCAATGCTAAGGAGAAAAGCAAAAGGCCCCCTGATGCCACGGTaGTGCCTCCTCTTGTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: TDTEHHLPPAMLRRKAKGPLMPR*CLLLWV Trigger: TACCCACAAGAGGAGGCACCACCGTGGCATCAGGGG...GCCTTTTGCTTTTCTCCTTAGCATTGCAGGTGGTAGGTGATGTTCAGTGTCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | CGTCCTAAAATAACCAGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTCTGCAGCAGGTGGCATaGATGAAAACGGTTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RPKITRSLREAGRVFCHFLQQVA*MKTVLE Trigger: CTCCAGAACCGTTTTCATCCATGCCACCTGCTGCAG...AAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCTGGTTATTTTAGGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | AGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTGTTACCACTTGGCACAGGGTCTTGGCATTCTaGAGAAATACTGCCATTTCG | + |
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Preference number: 4 (lower is better) Translates to: RSLREAGRVFCHFVTTWHRVLAF*RNTAIS Trigger: CGAAATGGCAGTATTTCTGCAGAATGCCAAGACCCT...GTGCCAAGTGGTAACAAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | AGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTGTTACCACTTGGCACCTCTTCTACTTCTACTaGATCCTCTCCTTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RSLREAGRVFCHFVTTWHLFYFY*ILSFSF Trigger: GAAGGAGAAGGAGAGGATGCAGTAGAAGTAGAAGAG...GTGCCAAGTGGTAACAAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | CAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGGCTTCTGCCACTTCTaGGGACTGCACACTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: QKSCPRFLAFWTMDVWPHGFCHF*GLHTGI Trigger: GATTCCAGTGTGCAGTCCGCAGAAGTGGCAGAAGCC...ATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACACCTGGCAGTCCTTATaGGCGCCAAAAACCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VKRVALDFWPSGLWTCGHTWQSL*APKTLH Trigger: GTGCAAGGTTTTTGGCGCCCATAAGGACTGCCAGGT...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | CATATGAATCGTGGTGAATTTCCACCTGTTTCCTGCTGCCTATGTGCTTCTCAGGCTGCAGACTGTCCCTaGGGAGAAGGGGCCTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: HMNRGEFPPVSCCLCASQAADCP*GEGASN Trigger: ATTTGAGGCCCCTTCTCCCCAGGGACAGTCTGCAGC...CTGAGAAGCACATAGGCAGCAGGAAACAGGTGGAAATTCACCACGATTCATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | AAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGGAGAAGGAGAAGACGTaGCGAGCTGGCTCAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: KRVALDFWPSGLWTCGHMEKEKT*RAGSGS Trigger: TGATCCTGAGCCAGCTCGCCACGTCTTCTCCTTCTC...CATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | AAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGACCATCACTGAGCTCTaGCTTCTGCCTCTGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: KRVALDFWPSGLWTCGHMTITEL*LLPLEH Trigger: GTGTTCCAGAGGCAGAAGTCAGAGCTCAGTGATGGT...CATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | AAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGCCTCCTGTGTTCGAGTaGTGGCTTGGGTCATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KRVALDFWPSGLWTCGHMPPVFE*WLGSFQ Trigger: CTGAAATGACCCAAGCCATCACTCGAACACAGGAGG...CATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | ACTGACACTGAACATCACCTACCACCTGCAATGCTAAGGAGAAAAGCAAAAGGCCTGATGCCACGGTGGTaGCTCCTCTTGTGGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: TDTEHHLPPAMLRRKAKGLMPRW*LLLWVS Trigger: ACTTACCCACAAGAGGAGGCACCACCGTGGCATCAG...GCCTTTTGCTTTTCTCCTTAGCATTGCAGGTGGTAGGTGATGTTCAGTGTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGCGTTCCTCTTCATaGTCTTCACACATGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKRVALDFWPSGLWTCGHMRSSS*SSHMGW Trigger: CCAGCCCATGTGTGAAGAGCATGAAGAGGAACGCAT...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | CATATGAATCGTGGTGAATTTCCACCTGTTTCCTGCTGCCTATGTGCTTCTCAGCTTCACTCCCATGAGTaGAAGGTGGGTTGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HMNRGEFPPVSCCLCASQLHSHE*KVGWSW Trigger: CCAGCTCCAACCCACCTTGCACTCATGGGAGTGAAG...CTGAGAAGCACATAGGCAGCAGGAAACAGGTGGAAATTCACCACGATTCATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | CATGCACCACACCTACACAACCTTCAGAAGGTTTCTCACACAAATGAAAGATTTCCCACTCCCCAAGGCTaGAGACTGTCCCTGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HAPHLHNLQKVSHTNERFPTPQG*RLSLGR Trigger: TCTCCCCAGGGACAGTCTGCAGCCTTGGGGAGTGGG...AAATCTTTCATTTGTGTGAGAAACCTTCTGAAGGTTGTGTAGGTGTGGTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAATCTGCTGAGAGCCAATaGGCACCACCTCCCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MQLLHRLSDCCYGRTLKKSAESQ*APPPPV Trigger: CACAGGGGGAGGTGGTGCCCATTGGCTCTCAGCAGA...TTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | TGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGAGACCTTCACTCCCATaGGTGCAAGGTGGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CSCSTDYQIAAMAGHLRKRPSLP*VQGGLE Trigger: CTCCAACCCACCTTGCACTCATGGGAGTGAAGGTCT...CTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | AAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTGTTACCACTTGGCACTTAAGTTATCCATGGTCTaGTGCTCTTTGGAGAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: KPEGGWESVLPLCYHLALKLSMV*CSLEKD Trigger: GTCTTTCTCCAAAGAGCAGCAGACCATGGATAACTT...AAGTGCCAAGTGGTAACAAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | CGTCCTAAAATAACCAGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTTCCTCTCCTCCAGGATaGCGTATAGGTGATCAAATT | + |
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Preference number: 4 (lower is better) Translates to: RPKITRSLREAGRVFCHFSSPPG*RIGDQI Trigger: AATTTGATCACCTATACGGCATCCTGGAGGAGAGGA...AAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCTGGTTATTTTAGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACAAGTTTCAGACTGTGTaGTCTGCTGAGAGCCAATGG | + |
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Preference number: 4 (lower is better) Translates to: VKRVALDFWPSGLWTCGHKFQTV*SAESQW Trigger: CCATTGGCTCTCAGCAGACCACACAGTCTGAAACTT...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACCTGGTTTTCCGGCTTTaGCCTTTATACCAACTAGGG | + |
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Preference number: 4 (lower is better) Translates to: VKRVALDFWPSGLWTCGHLVFRL*PLYQLG Trigger: CCCTAGTTGGTATAAAGGCCAAAGCCGGAAAACCAG...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | TGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGCCCATGAGTGCAAGGTaGGTTGGAGCTGGTTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: CSCSTDYQIAAMAGHLRKPMSAR*VGAGFP Trigger: CGGAAAACCAGCTCCAACCCACCTTGCACTCATGGG...CTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | ACTGACACTGAACATCACCTACCACCTGCAATGCTAAGGAGAAAAGCAAAAGGCTTTCGGGCTCATCCATaGACTGGATTCCTGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: TDTEHHLPPAMLRRKAKGFRAHP*TGFLTP Trigger: TGGAGTCAGGAATCCAGTTCATGGATGAGCCCGAAA...GCCTTTTGCTTTTCTCCTTAGCATTGCAGGTGGTAGGTGATGTTCAGTGTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | CAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATAGAGGTAGCTGCAGTTaGACTAGACTCCTTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: QKSCPRFLAFWTMDVWPHRGSCS*TRLLTT Trigger: AGTGGTAAGGAGTCTAGTTCAACTGCAGCTACCTCT...ATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | CGTCCTAAAATAACCAGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTTTATCCATGGTCTGCTaGTCTTTGGAGAAAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPKITRSLREAGRVFCHFLSMVC*SLEKDL Trigger: CAAGTCTTTCTCCAAAGAGCAGCAGACCATGGATAA...AAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCTGGTTATTTTAGGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | TGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGTTCCTGCACAGGTTGTaGTGGCAAGGGAGAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSCSTDYQIAAMAGHLRKFLHRL*WQGRMT Trigger: GGTCATTCTCCCTTGCCAGCACAACCTGTGCAGGAA...CTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | ACTGACACTGAACATCACCTACCACCTGCAATGCTAAGGAGAAAAGCAAAAGGCCACAGGTCCTGTTTCTaGTTTCTGCAGCACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTEHHLPPAMLRRKAKGHRSCF*FLQHSS Trigger: TGAGGAGTGCTGCAGAAAGCAGAAACAGGACCTGTG...GCCTTTTGCTTTTCTCCTTAGCATTGCAGGTGGTAGGTGATGTTCAGTGTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | AGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGTAGACAGCTCCTCTCCACTCACTGCTGCCTaGTCATTGGTTGCGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSDCCYGRTLKKVDSSSPLTAA*SLVAAS Trigger: AGAAGCCGCAACCAATGAGCAGGCAGCAGTGAGTGG...AGAGGAGCTGTCTACTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | CATATGAATCGTGGTGAATTTCCACCTGTTTCCTGCTGCCTATGTGCTTCTCAGTACGGGTTAGAGGCCTaGAAGATGTCACTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HMNRGEFPPVSCCLCASQYGLEA*KMSLAH Trigger: ATGTGCCAGTGACATCTTCCAGGCCTCTAACCCGTA...CTGAGAAGCACATAGGCAGCAGGAAACAGGTGGAAATTCACCACGATTCATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | TGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGTGGCTGATCACACCCTaGACTCTATCGTTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSCSTDYQIAAMAGHLRKWLITP*TLSLLP Trigger: GGGAAGCAACGATAGAGTCCAGGGTGTGATCAGCCA...CTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGTTCGAGTGATGGCTTaGGTCATTTCAGTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKSCPRFLAFWTMDVWPHVRVMA*VISVFL Trigger: GAGGAAGACTGAAATGACCCAAGCCATCACTCGAAC...ATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | CAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGATACGTTCTCCAGGTaGTCGGAATACTTCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: QKSCPRFLAFWTMDVWPHDTFSR*SEYFLI Trigger: TATCAGGAAGTATTCCGATCACCTGGAGAACGTATC...ATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | TGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGGGCTCATCCATGAACTaGATTCCTGACTCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSCSTDYQIAAMAGHLRKGSSMN*IPDSTN Trigger: GTTGGTGGAGTCAGGAATCCAGTTCATGGATGAGCC...CTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | AGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGTAGACAGCTCCTCTCAGCAATACCATCACTaGGCTCTGACTTCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSDCCYGRTLKKVDSSSQQYHH*ALTSAS Trigger: AGAGGCAGAAGTCAGAGCTCAGTGATGGTATTGCTG...AGAGGAGCTGTCTACTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | GACCAATCTCCATATTTTGATAAATCGGTCAGTTTGGAACTGACACTGAACATCTGTCCTCCAGCTGGCTaGTCACACCCTGGACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: DQSPYFDKSVSLELTLNICPPAG*SHPGLY Trigger: ATAGAGTCCAGGGTGTGATCAGCCAGCTGGAGGACA...GATGTTCAGTGTCAGTTCCAAACTGACCGATTTATCAAAATATGGAGATTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | CAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATACTCTCCTCTTCCCCTaGAGATGCTATTTGAACATT | + |
|
Preference number: 4 (lower is better) Translates to: QKSCPRFLAFWTMDVWPHTLLFP*RCYLNI Trigger: AATGTTCAAATAGCATCTTCAGGGGAAGAGGAGAGT...ATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAATGCACAAGGAACAGGTaGGCACTTCACAGTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MQLLHRLSDCCYGRTLKKCTRNR*ALHSSD Trigger: GTCTGAACTGTGAAGTGCCCACCTGTTCCTTGTGCA...TTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | CATGCACCACACCTACACAACCTTCAGAAGGTTTCTCACACAAATGAAAGATTTGAGTGCAAGGTGGGTTaGAGCTGGTTTTCCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HAPHLHNLQKVSHTNERFECKVG*SWFSGF Trigger: AAAGCCGGAAAACCAGCTCCAACCCACCTTGCACTC...AAATCTTTCATTTGTGTGAGAAACCTTCTGAAGGTTGTGTAGGTGTGGTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | TGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGTCTAGTTTCTCCATCTaGAACGCCTTTGATGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSCSTDYQIAAMAGHLRKSSFSI*NAFDAS Trigger: GGAAGCATCAAAGGCGTTTCAGATGGAGAAACTAGA...CTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | ACTGACACTGAACATCACCTACCACCTGCAATGCTAAGGAGAAAAGCAAAAGGCATTCTGCAGAAATACTaGCATTTCGGGCTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTEHHLPPAMLRRKAKGILQKY*HFGLIH Trigger: ATGGATGAGCCCGAAATGGCAGTATTTCTGCAGAAT...GCCTTTTGCTTTTCTCCTTAGCATTGCAGGTGGTAGGTGATGTTCAGTGTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAATTTCCAAGTTATCCATaGTCTGCTGCTCTTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MQLLHRLSDCCYGRTLKKFPSYP*SAALWR Trigger: TCTCCAAAGAGCAGCAGACCATGGATAACTTGGAAA...TTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| 3UTR CAA 72 bp | ATAGGGAAAGGAACCTCTACAGTGCCCTACATAGCTTaGGTCAGTGACCAATCTCCATATTTTGATAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: IGKGTSTVPYIA*VSDQSPYFDKS Trigger: CGATTTATCAAAATATGGAGATTGGTCACTGACCAAAGCTATGTAGGGCACTGTAGAGGTTCCTTTCCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | CATGCACCACACCTACACAACCTTCAGAAGGTTTCTCACACAAATGAAAGATTTTCAGACAATAGATGTTaGTGCGTTCCTCTTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: HAPHLHNLQKVSHTNERFSDNRC*CVPLHA Trigger: AGCATGAAGAGGAACGCATCAACATCTATTGTCTGA...AAATCTTTCATTTGTGTGAGAAACCTTCTGAAGGTTGTGTAGGTGTGGTGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | CATGCACCACACCTACACAACCTTCAGAAGGTTTCTCACACAAATGAAAGATTTATGGGACAGATCAGTTaGTTTTCCAAGTTATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HAPHLHNLQKVSHTNERFMGQIS*FSKLSM Trigger: CATGGATAACTTGGAAAAGCAACTGATCTGTCCCAT...AAATCTTTCATTTGTGTGAGAAACCTTCTGAAGGTTGTGTAGGTGTGGTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR GCA 90 bp | TGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGTATTTGAACATTTTCTaGCTCTTCTACTTCTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSCSTDYQIAAMAGHLRKYLNIF*LFYFYC Trigger: GCAGTAGAAGTAGAAGAGGCAGAAAATGTTCAAATA...CTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR TCA 90 bp | GACCAATCTCCATATTTTGATAAATCGGTCAGTTTGGAACTGACACTGAACATCCCTGAAGATGCTATTTaGACATTTTCTGCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DQSPYFDKSVSLELTLNIPEDAI*TFSASS Trigger: AGAAGAGGCAGAAAATGTTCAAATAGCATCTTCAGG...GATGTTCAGTGTCAGTTCCAAACTGACCGATTTATCAAAATATGGAGATTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CCA 90 bp | GACCAATCTCCATATTTTGATAAATCGGTCAGTTTGGAACTGACACTGAACATCTGGTCTGCTGCTCTTTaGAGAAAGACTTGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQSPYFDKSVSLELTLNIWSAAL*RKTCNS Trigger: TGAATTACAAGTCTTTCTCCAAAGAGCAGCAGACCA...GATGTTCAGTGTCAGTTCCAAACTGACCGATTTATCAAAATATGGAGATTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 90 bp | TCTGCAGTCCATAGACCCCATGTCTGTCTAACACCACCTCATGTCTaGAGGAGGGACAGCGGAAGCGGCCCCCTGATGCCACGGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAVHRPHVCLTPPHV*RRDSGSGPLMPRWC Trigger: GCACCACCGTGGCATCAGGGGGCCGCTTCCGCTGTCCCTCCTGCAGACATGAGGTGGTGTTAGACAGACATGGGGTCTATGGACTGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 90 bp | GATCCGCAGTTTCCGCTGCTGAAGGGCCTGAAGTTTCAGACTGTGTaGTCTGCTGAGAGCCAATGGGCACCACCTCCCCCTGTGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: DPQFPLLKGLKFQTV*SAESQWAPPPPVSP Trigger: TGGTGACACAGGGGGAGGTGGTGCCCATTGGCTCTCAGCAGACCACACAGTCTGAAACTTCAGGCCCTTCAGCAGCGGAAACTGCGGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | GTTTCCGCTGCTGAAGGGCCTGAAGTTTCAGACTGTGTGGTCTGCTaGGAGCCAATGGGCACCACCTCCCCCTGTGTCACCAGGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: VSAAEGPEVSDCVVC*EPMGTTSPCVTRTS Trigger: AGATGTCCTGGTGACACAGGGGGAGGTGGTGCCCATTGGCTCTCAGCAGACCACACAGTCTGAAACTTCAGGCCCTTCAGCAGCGGAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 90 bp | TTGCGGCTTCTGCCACTTCTGCGGACTGCACACTGGAATCCTCAATaGCCAGAGGCCCTATTTGACCCAGACCTTCACTCCCATGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRLLPLLRTAHWNPQ*PEALFDPDLHSHEC Trigger: GCACTCATGGGAGTGAAGGTCTGGGTCAAATAGGGCCTCTGGGCATTGAGGATTCCAGTGTGCAGTCCGCAGAAGTGGCAGAAGCCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 90 bp | AGACTCCTTACCACTCACTGCTGCCTGCTCATTGGTTGCGGCTTCTaGCACTTCTGCGGACTGCACACTGGAATCCTCAATGCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLTTHCCLLIGCGF*HFCGLHTGILNAQR Trigger: CCTCTGGGCATTGAGGATTCCAGTGTGCAGTCCGCAGAAGTGGCAGAAGCCGCAACCAATGAGCAGGCAGCAGTGAGTGGTAAGGAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 90 bp | CCTGCTCATTGGTTGCGGCTTCTGCCACTTCTGCGGACTGCACACTaGAATCCTCAATGCCCAGAGGCCCTATTTGACCCAGACCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PAHWLRLLPLLRTAH*NPQCPEALFDPDLH Trigger: GTGAAGGTCTGGGTCAAATAGGGCCTCTGGGCATTGAGGATTCCAGTGTGCAGTCCGCAGAAGTGGCAGAAGCCGCAACCAATGAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 90 bp | GAGGTAGCTGCAGTTGAACTAGACTCCTTACCACTCACTGCTGCCTaGTCATTGGTTGCGGCTTCTGCCACTTCTGCGGACTGCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: EVAAVELDSLPLTAA*SLVAASATSADCTL Trigger: CAGTGTGCAGTCCGCAGAAGTGGCAGAAGCCGCAACCAATGAGCAGGCAGCAGTGAGTGGTAAGGAGTCTAGTTCAACTGCAGCTACCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | ACAGCAATACCATCACTGAGCTCTGACTTCTGCCTCTGGAACACATaGGTCAGGGGAGCCACCTGGCAGTCCTTATGGGCGCCAAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: TAIPSLSSDFCLWNT*VRGATWQSLWAPKT Trigger: GGTTTTTGGCGCCCATAAGGACTGCCAGGTGGCTCCCCTGACTCATGTGTTCCAGAGGCAGAAGTCAGAGCTCAGTGATGGTATTGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 90 bp | CAATGCCCAGAGGCCCTATTTGACCCAGACCTTCACTCCCATGAGTaGAAGGTGGGTTGGAGCTGGTTTTCCGGCTTTGGCCTTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: QCPEALFDPDLHSHE*KVGWSWFSGFGLYT Trigger: GGTATAAAGGCCAAAGCCGGAAAACCAGCTCCAACCCACCTTGCACTCATGGGAGTGAAGGTCTGGGTCAAATAGGGCCTCTGGGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | CTGGGGAGAAGGGGCCTCAAATCCAATCTGAGAGGTAGCTGCAGTTaGACTAGACTCCTTACCACTCACTGCTGCCTGCTCATTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGRRGLKSNLRGSCS*TRLLTTHCCLLIGC Trigger: GCAACCAATGAGCAGGCAGCAGTGAGTGGTAAGGAGTCTAGTTCAACTGCAGCTACCTCTCAGATTGGATTTGAGGCCCCTTCTCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 90 bp | CAGAGGCCCTATTTGACCCAGACCTTCACTCCCATGAGTGCAAGGTaGGTTGGAGCTGGTTTTCCGGCTTTGGCCTTTATACCAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QRPYLTQTFTPMSAR*VGAGFPALAFIPTR Trigger: CCTAGTTGGTATAAAGGCCAAAGCCGGAAAACCAGCTCCAACCCACCTTGCACTCATGGGAGTGAAGGTCTGGGTCAAATAGGGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | AAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTGTTACCACTTGGCACTTCATTTCCTGCACAGGTaGTGCTGGCAAGGGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KPEGGWESVLPLCYHLALHFLHR*CWQGRM Trigger: CATTCTCCCTTGCCAGCACAACCTGTGCAGGAAATG...AAGTGCCAAGTGGTAACAAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | CAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACATGCCCAGAGGCCCTATTaGACCCAGACCTTCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QKSCPRFLAFWTMDVWPHAQRPY*TQTFTP Trigger: GGGAGTGAAGGTCTGGGTCAAATAGGGCCTCTGGGC...ATGTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | CCTGGACTCTATCGTTGCTTCCCACAAGTACAGCAATACCATCACTaGGCTCTGACTTCTGCCTCTGGAACACATGAGTCAGGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLYRCFPQVQQYHH*ALTSASGTHESGEP Trigger: TGGCTCCCCTGACTCATGTGTTCCAGAGGCAGAAGTCAGAGCTCAGTGATGGTATTGCTGTACTTGTGGGAAGCAACGATAGAGTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | TGTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCATGGGCGCCAAAAACCTaGCACAAGGAACAGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CQKSCPRFLAFWTMDVWPWAPKT*HKEQVG Trigger: GCCCACCTGTTCCTTGTGCAAGGTTTTTGGCGCCCA...TGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | CGTCCTAAAATAACCAGAAGCCTGAGGGAGGCTGGGAGAGTGTTCTGCCACTTTGCTGGTTTTCCGGCTTaGGCCTTTATACCAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPKITRSLREAGRVFCHFAGFPA*AFIPTR Trigger: CCTAGTTGGTATAAAGGCCAAAGCCGGAAAACCAGC...AAAGTGGCAGAACACTCTCCCAGCCTCCCTCAGGCTTCTGGTTATTTTAGGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | CATATGAATCGTGGTGAATTTCCACCTGTTTCCTGCTGCCTATGTGCTTCTCAGACTGCTGCCTGCTCATaGGTTGCGGCTTCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: HMNRGEFPPVSCCLCASQTAACS*VAASAT Trigger: AGTGGCAGAAGCCGCAACCAATGAGCAGGCAGCAGT...CTGAGAAGCACATAGGCAGCAGGAAACAGGTGGAAATTCACCACGATTCATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | GGGTCTTGGCATTCTGCAGAAATACTGCCATTTCGGGCTCATCCATaGACTGGATTCCTGACTCCACCAACTTGGATACGTTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSWHSAEILPFRAHP*TGFLTPPTWIRSPG Trigger: ACCTGGAGAACGTATCCAAGTTGGTGGAGTCAGGAATCCAGTTCATGGATGAGCCCGAAATGGCAGTATTTCTGCAGAATGCCAAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 90 bp | TCCTCAATAGTTTTACAGGTGTCCTCCAGCTGGCTGATCACACCCTaGACTCTATCGTTGCTTCCCACAAGTACAGCAATACCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SSIVLQVSSSWLITP*TLSLLPTSTAIPSL Trigger: CAGTGATGGTATTGCTGTACTTGTGGGAAGCAACGATAGAGTCCAGGGTGTGATCAGCCAGCTGGAGGACACCTGTAAAACTATTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | CTGCAGAAATACTGCCATTTCGGGCTCATCCATGAACTGGATTCCTaGCTCCACCAACTTGGATACGTTCTCCAGGTGATCGGAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: LQKYCHFGLIHELDS*LHQLGYVLQVIGIL Trigger: AAGTATTCCGATCACCTGGAGAACGTATCCAAGTTGGTGGAGTCAGGAATCCAGTTCATGGATGAGCCCGAAATGGCAGTATTTCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | AAGCTGAGAGGGCTCTGCAGCTTTCTCCAGACTCTCCTCTTCCCCTaGAGATGCTATTTGAACATTTTCTGCCTCTTCTACTTCTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLRGLCSFLQTLLFP*RCYLNIFCLFYFYC Trigger: GCAGTAGAAGTAGAAGAGGCAGAAAATGTTCAAATAGCATCTTCAGGGGAAGAGGAGAGTCTGGAGAAAGCTGCAGAGCCCTCTCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
||
| CDS GCA 90 bp | GCCTTTGATGCTTCCACGATCTTTTGCAACAGGGTCTTGGCATTCTaGAGAAATACTGCCATTTCGGGCTCATCCATGAACTGGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: AFDASTIFCNRVLAF*RNTAISGSSMNWIP Trigger: AGGAATCCAGTTCATGGATGAGCCCGAAATGGCAGTATTTCTGCAGAATGCCAAGACCCTGTTGCAAAAGATCGTGGAAGCATCAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | CATATGAATCGTGGTGAATTTCCACCTGTTTCCTGCTGCCTATGTGCTTCTCAGTGTTCGAGTGATGGCTaGGGTCATTTCAGTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: HMNRGEFPPVSCCLCASQCSSDG*GHFSLP Trigger: AGGAAGACTGAAATGACCCAAGCCATCACTCGAACA...CTGAGAAGCACATAGGCAGCAGGAAACAGGTGGAAATTCACCACGATTCATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | GTCAAAAGAGTTGCCCTAGATTTTTGGCCTTCTGGACTATGGACGTGTGGCCACTTTTGCAACAGGGTCTaGGCATTCTGCAGAAATACT | + |
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Preference number: 5 (lower is better) Translates to: VKRVALDFWPSGLWTCGHFCNRV*AFCRNT Trigger: AGTATTTCTGCAGAATGCCAAGACCCTGTTGCAAAA...GTGGCCACACGTCCATAGTCCAGAAGGCCAAAAATCTAGGGCAACTCTTTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | ATGAACTGGATTCCTGACTCCACCAACTTGGATACGTTCTCCAGGTaGTCGGAATACTTCCTGATAAGAGTTCGGACATGTTCCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: MNWIPDSTNLDTFSR*SEYFLIRVRTCSSF Trigger: GAAACTGGAACATGTCCGAACTCTTATCAGGAAGTATTCCGATCACCTGGAGAACGTATCCAAGTTGGTGGAGTCAGGAATCCAGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 90 bp | TCTGCAGCTTTCTCCAGACTCTCCTCTTCCCCTGAAGATGCTATTTaGACATTTTCTGCCTCTTCTACTTCTACTGCATCCTCTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SAAFSRLSSSPEDAI*TFSASSTSTASSPS Trigger: AGAAGGAGAGGATGCAGTAGAAGTAGAAGAGGCAGAAAATGTTCAAATAGCATCTTCAGGGGAAGAGGAGAGTCTGGAGAAAGCTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | TGCAGTTGCTCCACAGATTATCAGATTGCTGCTATGGCAGGACACTTAAGAAAGGATGGGACAGATCAGTaGCTTTTCCAAGTTATCCAT | + |
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Preference number: 5 (lower is better) Translates to: CSCSTDYQIAAMAGHLRKDGTDQ*LFQVIH Trigger: ATGGATAACTTGGAAAAGCAACTGATCTGTCCCATC...CTTTCTTAAGTGTCCTGCCATAGCAGCAATCTGATAATCTGTGGAGCAACTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS-3UTR CAA 90 bp | GACCAATCTCCATATTTTGATAAATCGGTCAGTTTGGAACTGACACTGAACATCTCTTCTCTATTGAGATaGACAGTGAAGTTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: DQSPYFDKSVSLELTLNISSLLR*TVKLLM Trigger: CATGAGCAACTTCACTGTCAATCTCAATAGAGAAGA...GATGTTCAGTGTCAGTTCCAAACTGACCGATTTATCAAAATATGGAGATTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 72 bp | CATAGACCCCATGTCTGTCTAACACCACCTCATGTCTaGAGGAGGGACAGCGGAAGCGGCCCCCTGATGCCA | + |
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Preference number: 6 (lower is better) Translates to: HRPHVCLTPPHV*RRDSGSGPLMP Trigger: TGGCATCAGGGGGCCGCTTCCGCTGTCCCTCCTGCAGACATGAGGTGGTGTTAGACAGACATGGGGTCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 72 bp | GAGGCCCTATTTGACCCAGACCTTCACTCCCATGAGTaGAAGGTGGGTTGGAGCTGGTTTTCCGGCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: EALFDPDLHSHE*KVGWSWFSGFG Trigger: GCCAAAGCCGGAAAACCAGCTCCAACCCACCTTGCACTCATGGGAGTGAAGGTCTGGGTCAAATAGGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 72 bp | CTGCCACTTCTGCGGACTGCACACTGGAATCCTCAATaGCCAGAGGCCCTATTTGACCCAGACCTTCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LPLLRTAHWNPQ*PEALFDPDLHS Trigger: GGAGTGAAGGTCTGGGTCAAATAGGGCCTCTGGGCATTGAGGATTCCAGTGTGCAGTCCGCAGAAGTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 72 bp | AGACTCCTTACCACTCACTGCTGCCTGCTCATTGGTTaGGGCTTCTGCCACTTCTGCGGACTGCACACTGGA | + |
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Preference number: 6 (lower is better) Translates to: RLLTTHCCLLIG*GFCHFCGLHTG Trigger: TCCAGTGTGCAGTCCGCAGAAGTGGCAGAAGCCGCAACCAATGAGCAGGCAGCAGTGAGTGGTAAGGAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 72 bp | CTGAAGTTTCAGACTGTGTGGTCTGCTGAGAGCCAATaGGCACCACCTCCCCCTGTGTCACCAGGACATCTG | + |
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Preference number: 6 (lower is better) Translates to: LKFQTVWSAESQ*APPPPVSPGHL Trigger: CAGATGTCCTGGTGACACAGGGGGAGGTGGTGCCCATTGGCTCTCAGCAGACCACACAGTCTGAAACTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 72 bp | TGGTTGCGGCTTCTGCCACTTCTGCGGACTGCACACTaGAATCCTCAATGCCCAGAGGCCCTATTTGACCCA | + |
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Preference number: 6 (lower is better) Translates to: WLRLLPLLRTAH*NPQCPEALFDP Trigger: TGGGTCAAATAGGGCCTCTGGGCATTGAGGATTCCAGTGTGCAGTCCGCAGAAGTGGCAGAAGCCGCAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CAA 90 bp | TTCTGCGGACTGCACACTGGAATCCTCAATGCCCAGAGGCCCTATTaGACCCAGACCTTCACTCCCATGAGTGCAAGGTGGGTTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FCGLHTGILNAQRPY*TQTFTPMSARWVGA Trigger: AGCTCCAACCCACCTTGCACTCATGGGAGTGAAGGTCTGGGTCAAATAGGGCCTCTGGGCATTGAGGATTCCAGTGTGCAGTCCGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 72 bp | GCAGTTGAACTAGACTCCTTACCACTCACTGCTGCCTaGTCATTGGTTGCGGCTTCTGCCACTTCTGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: AVELDSLPLTAA*SLVAASATSAD Trigger: GTCCGCAGAAGTGGCAGAAGCCGCAACCAATGAGCAGGCAGCAGTGAGTGGTAAGGAGTCTAGTTCAACTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 72 bp | GACCCAGACCTTCACTCCCATGAGTGCAAGGTGGGTTaGAGCTGGTTTTCCGGCTTTGGCCTTTATACCAAC | + |
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Preference number: 6 (lower is better) Translates to: DPDLHSHECKVG*SWFSGFGLYTN Trigger: GTTGGTATAAAGGCCAAAGCCGGAAAACCAGCTCCAACCCACCTTGCACTCATGGGAGTGAAGGTCTGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 72 bp | AGGGGCCTCAAATCCAATCTGAGAGGTAGCTGCAGTTaGACTAGACTCCTTACCACTCACTGCTGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RGLKSNLRGSCS*TRLLTTHCCLL Trigger: GAGCAGGCAGCAGTGAGTGGTAAGGAGTCTAGTTCAACTGCAGCTACCTCTCAGATTGGATTTGAGGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 72 bp | CAGCACTCCTCAATAGTTTTACAGGTGTCCTCCAGCTaGCTGATCACACCCTGGACTCTATCGTTGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: QHSSIVLQVSSS*LITPWTLSLLP Trigger: GGGAAGCAACGATAGAGTCCAGGGTGTGATCAGCCAGCTGGAGGACACCTGTAAAACTATTGAGGAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CAA 90 bp | TTACAGGTGTCCTCCAGCTGGCTGATCACACCCTGGACTCTATCGTaGCTTCCCACAAGTACAGCAATACCATCACTGAGCTCTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: LQVSSSWLITPWTLS*LPTSTAIPSLSSDF Trigger: GAAGTCAGAGCTCAGTGATGGTATTGCTGTACTTGTGGGAAGCAACGATAGAGTCCAGGGTGTGATCAGCCAGCTGGAGGACACCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CAA 72 bp | ATGTTCCAGTTTCTCCTCCTGTGTTCGAGTGATGGCTaGGGTCATTTCAGTCTTCCTCTCCTCCAGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: MFQFLLLCSSDG*GHFSLPLLQDA Trigger: GGCATCCTGGAGGAGAGGAAGACTGAAATGACCCAAGCCATCACTCGAACACAGGAGGAGAAACTGGAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CAA 90 bp | TTCACTCCCATGAGTGCAAGGTGGGTTGGAGCTGGTTTTCCGGCTTaGGCCTTTATACCAACTAGGGTAAAACAAGGGATCCGCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FTPMSARWVGAGFPA*AFIPTRVKQGIRSF Trigger: GAAACTGCGGATCCCTTGTTTTACCCTAGTTGGTATAAAGGCCAAAGCCGGAAAACCAGCTCCAACCCACCTTGCACTCATGGGAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 72 bp | TACTGCCATTTCGGGCTCATCCATGAACTGGATTCCTaGCTCCACCAACTTGGATACGTTCTCCAGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: YCHFGLIHELDS*LHQLGYVLQVI Trigger: GATCACCTGGAGAACGTATCCAAGTTGGTGGAGTCAGGAATCCAGTTCATGGATGAGCCCGAAATGGCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 72 bp | GTTTTACAGGTGTCCTCCAGCTGGCTGATCACACCCTaGACTCTATCGTTGCTTCCCACAAGTACAGCAATA | + |
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Preference number: 6 (lower is better) Translates to: VLQVSSSWLITP*TLSLLPTSTAI Trigger: TATTGCTGTACTTGTGGGAAGCAACGATAGAGTCCAGGGTGTGATCAGCCAGCTGGAGGACACCTGTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 72 bp | TATTTGACCCAGACCTTCACTCCCATGAGTGCAAGGTaGGTTGGAGCTGGTTTTCCGGCTTTGGCCTTTATA | + |
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Preference number: 6 (lower is better) Translates to: YLTQTFTPMSAR*VGAGFPALAFI Trigger: TATAAAGGCCAAAGCCGGAAAACCAGCTCCAACCCACCTTGCACTCATGGGAGTGAAGGTCTGGGTCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS GCA 72 bp | GCTTCCACGATCTTTTGCAACAGGGTCTTGGCATTCTaGAGAAATACTGCCATTTCGGGCTCATCCATGAAC | + |
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Preference number: 6 (lower is better) Translates to: ASTIFCNRVLAF*RNTAISGSSMN Trigger: GTTCATGGATGAGCCCGAAATGGCAGTATTTCTGCAGAATGCCAAGACCCTGTTGCAAAAGATCGTGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 72 bp | TGCAGAAATACTGCCATTTCGGGCTCATCCATGAACTaGATTCCTGACTCCACCAACTTGGATACGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CRNTAISGSSMN*IPDSTNLDTFS Trigger: GGAGAACGTATCCAAGTTGGTGGAGTCAGGAATCCAGTTCATGGATGAGCCCGAAATGGCAGTATTTCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CAA 72 bp | ATGAGTGCAAGGTGGGTTGGAGCTGGTTTTCCGGCTTaGGCCTTTATACCAACTAGGGTAAAACAAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: MSARWVGAGFPA*AFIPTRVKQGI Trigger: GATCCCTTGTTTTACCCTAGTTGGTATAAAGGCCAAAGCCGGAAAACCAGCTCCAACCCACCTTGCACTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 72 bp | TATCGTTGCTTCCCACAAGTACAGCAATACCATCACTaGGCTCTGACTTCTGCCTCTGGAACACATGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: YRCFPQVQQYHH*ALTSASGTHES Trigger: TGACTCATGTGTTCCAGAGGCAGAAGTCAGAGCTCAGTGATGGTATTGCTGTACTTGTGGGAAGCAACGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 72 bp | CATTCTGCAGAAATACTGCCATTTCGGGCTCATCCATaGACTGGATTCCTGACTCCACCAACTTGGATACGT | + |
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Preference number: 6 (lower is better) Translates to: HSAEILPFRAHP*TGFLTPPTWIR Trigger: ACGTATCCAAGTTGGTGGAGTCAGGAATCCAGTTCATGGATGAGCCCGAAATGGCAGTATTTCTGCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CCA 72 bp | CCTTTGATGCTTCCACGATCTTTTGCAACAGGGTCTTaGCATTCTGCAGAAATACTGCCATTTCGGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PLMLPRSFATGS*HSAEILPFRAH Trigger: ATGAGCCCGAAATGGCAGTATTTCTGCAGAATGCCAAGACCCTGTTGCAAAAGATCGTGGAAGCATCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 72 bp | ATTCCTGACTCCACCAACTTGGATACGTTCTCCAGGTaGTCGGAATACTTCCTGATAAGAGTTCGGACATGT | + |
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Preference number: 6 (lower is better) Translates to: IPDSTNLDTFSR*SEYFLIRVRTC Trigger: ACATGTCCGAACTCTTATCAGGAAGTATTCCGATCACCTGGAGAACGTATCCAAGTTGGTGGAGTCAGGAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS TCA 72 bp | ATTTCAGTCTTCCTCTCCTCCAGGATGCCGTATAGGTaGTCAAATTTCTCACACAGGTCCTGTTTCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ISVFLSSRMPYR*SNFSHRSCFCF Trigger: AAAGCAGAAACAGGACCTGTGTGAGAAATTTGATCACCTATACGGCATCCTGGAGGAGAGGAAGACTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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| CDS CAA 72 bp | CATAACCTTGTTCTAGTTTCTCCATCTGAAACGCCTTaGATGCTTCCACGATCTTTTGCAACAGGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HNLVLVSPSETP*MLPRSFATGSW Trigger: CCAAGACCCTGTTGCAAAAGATCGTGGAAGCATCAAAGGCGTTTCAGATGGAGAAACTAGAACAAGGTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029139.9 |
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