Pregenerated sensors for TRIM54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062077Ensembl transcript IDs: ENSMUST00000013771.15, ENSMUST00000202769.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTaGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGG | + |
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Preference number: 1 (lower is better) Translates to: IENLPGGGKPSLVAR*SLRRSSASLGSRFG Trigger: CCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR CCA 90 bp | AGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTaGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SPLLRTFPGAGSRAW*RGGLCADPQHPLAP Trigger: GGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR CCA 90 bp | TTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTaGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LSPLLRTFPGAGSRA*WRGGLCADPQHPLA Trigger: AGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCCCGCTTCGGGTGTaGGCTCTGGATCAGAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: PSRGREAELGGAVVSAQILPLRV*ALDQSR Trigger: CCGACTCTGATCCAGAGCGCACACCCGAAGCGGGAG...GATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCTCCCGCTTCGGGTGTaGGCTCTGGATCAGAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: GAGSRAWWRGGLCADPQHLPLRV*ALDQSR Trigger: CCGACTCTGATCCAGAGCGCACACCCGAAGCGGGAG...ATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR-3UTR GCA 90 bp | GACGTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGATGGCGCGGTGGTCTCTaGGCAGATCCTCAGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: DVGHLSPLLRTFPGAGSRWRGGL*ADPQHP Trigger: GGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCA...TCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCACGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202769.2 |
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| 3UTR-3UTR CCA 90 bp | CGTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCATCCTCAGCATCCCTTaGCTCCCGCTTCGGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RGTLESFIENLPGGGKPSILSIP*LPLRVC Trigger: GCACACCCGAAGCGGGAGCCAAGGGATGCTGAGGAT...GCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR CCA 72 bp | CTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTaGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LPGGGKPSLVAR*SLRRSSASLGS Trigger: GGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR CCA 72 bp | GGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTaGCTCCCGCTTCGGGTGTGCGCTCTGGATCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: GAVVSAQILSIP*LPLRVCALDQS Trigger: ACTCTGATCCAGAGCGCACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR CCA 72 bp | TTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTaGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LLRTFPGAGSRA*WRGGLCADPQH Trigger: ATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | TTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTAGGCCCCGCACGCGCTaGAACTTCTCCTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FPGAGSRAWWRGGLCADPRPRTR*NFSSCS Trigger: GGAGCAGGAGGAGAAGTTGCAGCGCGTGCGGGGCCT...AGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCCTCCAGCCCCGCATTaGCCTCCTCCCCATCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PSRGREAELGGAVVSAQIPPAPH*PPPHPK Trigger: CTTTGGATGGGGAGGAGGGCAATGCGGGGCTGGAGG...GATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | CCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGGGCTCCTCCATGGACTaGATGGCGGACTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGAGSRAWWRGGLCADPQGSSMD*MADSTS Trigger: GCTGGTGGAGTCCGCCATCCAGTCCATGGAGGAGCC...CTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | CCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATGCTCTCATAGCCTaGCTCCGGCCGTCCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PGAGSRAWWRGGLCADPQHALIA*LRPSCQ Trigger: CTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATG...CTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCATGCTCTCATAGCCTaGCTCCGGCCGTCCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSRGREAELGGAVVSAQIHALIA*LRPSCQ Trigger: CTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATG...GATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | TTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTTGGCTCCGGCCGTCCTaGCAGCTCCACCTTCGACAT | + |
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Preference number: 4 (lower is better) Translates to: FPGAGSRAWWRGGLCADPWLRPS*QLHLRH Trigger: ATGTCGAAGGTGGAGCTGGCAGGACGGCCGGAGCCA...AGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | ACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATTGGCTCCGGCCGTCCTaGCAGCTCCACCTTCGACAT | + |
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Preference number: 4 (lower is better) Translates to: TFPGAGSRAWWRGGLCADWLRPS*QLHLRH Trigger: ATGTCGAAGGTGGAGCTGGCAGGACGGCCGGAGCCA...ATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | ACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATAAGTGGTCTCCGTACTaGCGGATGAGGCCCCGCACG | + |
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Preference number: 4 (lower is better) Translates to: TFPGAGSRAWWRGGLCADKWSPY*RMRPRT Trigger: CGTGCGGGGCCTCATCCGCCAGTACGGAGACCACTT...ATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | AACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGAGGCTCCTCCATGGACTaGATGGCGGACTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: NLPGGGKPSLVARWSLRRGSSMD*MADSTS Trigger: GCTGGTGGAGTCCGCCATCCAGTCCATGGAGGAGCC...TCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR TCA 90 bp | GCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTTCCCGGGCCAGTGCTTaGAGCAGTTCGCCCTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: ARWSLRRSSASLGSRFGCSRASA*SSSPLR Trigger: GCGCAAGGGCGAACTGCTTCAAGCACTGGCCCGGGA...ACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | TTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTGTGGAGCCCCGGGATTaGCACAGAGGATTAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: FPGAGSRAWWRGGLCADPVEPRD*HRGLEA Trigger: GGCCTCTAATCCTCTGTGGCAATCCCGGGGCTCCAC...AGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | ACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATTGGGTGATCACTGCCTaGACACGGTCATTGCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TFPGAGSRAWWRGGLCADWVITA*TRSLPA Trigger: GGCGGGCAATGACCGTGTGCAGGCAGTGATCACCCA...ATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR TCA 90 bp | GGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATGGACTCCACCAGCTTTaGGGAGCCCTCCAAGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GAGSRAWWRGGLCADPQHGLHQL*GALQVV Trigger: GACCACTTGGAGGGCTCCTCAAAGCTGGTGGAGTCC...ATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR TCA 90 bp | TCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCTTGCCCCGACCTTGTTaGTCAGCTCCTTTGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SRGREAELGGAVVSAQILLPRPC*SAPLPA Trigger: AGCAGGCAAAGGAGCTGATCAACAAGGTCGGGGCAA...GAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | CCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAAAGTTGTCCATGTTGTaGGCATCCCCTAGCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PGGGKPSLVARWSLRRSSKLSML*ASPSSG Trigger: GCCGCTGCTAGGGGATGCGCACAACATGGACAACTT...TGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | GCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTAAGTGGTCTCCGTACTaGCGGATGAGGCCCCGCACG | + |
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Preference number: 4 (lower is better) Translates to: ARWSLRRSSASLGSRFGCKWSPY*RMRPRT Trigger: CGTGCGGGGCCTCATCCGCCAGTACGGAGACCACTT...ACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| 3UTR CAA 72 bp | TGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTaGGCTCCCGCTTCGGGTGTGCGCTCTGGATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: WRGGLCADPQHP*APASGVRSGSE Trigger: CTCTGATCCAGAGCGCACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR TCA 90 bp | CGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTGCCTCCTCCATCTGGGTaGTCACTGCCTGCACACGGT | + |
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Preference number: 4 (lower is better) Translates to: RGGLCADPQHPLAPASGVPPPSG*SLPAHG Trigger: ACCGTGTGCAGGCAGTGATCACCCAGATGGAGGAGG...CACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | ACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATTCCTCACACATGAGGTaGTGTTCAGCCTTGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TFPGAGSRAWWRGGLCADSSHMR*CSALAC Trigger: GCACGCCAAGGCTGAACAGCACCTCATGTGTGAGGA...ATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | TCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCATCTTCTCGTCCTCGTaGTCCTCACACATGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SRGREAELGGAVVSAQILIFSSS*SSHMRC Trigger: GCACCTCATGTGTGAGGAGCACGAGGACGAGAAGAT...GAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | GGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTGCGCGGGCGCCGAAAACCTTaGAGAGAGAGCAGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GGLCADPQHPLAPASGVRGRRKP*RESRWA Trigger: TGCCCACCTGCTCTCTCTGCAAGGTTTTCGGCGCCC...GCGCACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | GGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCACCAGCATCGCGATaGCATCGCTCAGCTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: GREAELGGAVVSAQILSIPPASR*HRSAHS Trigger: AGAGTGAGCTGAGCGATGGCATCGCGATGCTGGTGG...GATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | TGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTTGGGTGATCACTGCCTaGACACGGTCATTGCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: WRGGLCADPQHPLAPASGWVITA*TRSLPA Trigger: GGCGGGCAATGACCGTGTGCAGGCAGTGATCACCCA...ACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | CCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGTTGATCAGCTCCTTTaGCTGCTGGAGGTAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PGGGKPSLVARWSLRRSSVDQLL*LLEVES Trigger: GCTCTCTACCTCCAGCAGGCAAAGGAGCTGATCAAC...TGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCAGAGGATTAGAGGCCTaGAAGACGTCGTTGGCACAC | + |
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Preference number: 4 (lower is better) Translates to: PSRGREAELGGAVVSAQIRGLEA*KTSLAH Trigger: GTGTGCCAACGACGTCTTCCAGGCCTCTAATCCTCT...GATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | GGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCTGAAGACACCGTTGTaGAGCCCCGGGATTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GREAELGGAVVSAQILSILKTPL*SPGIAT Trigger: TGTGGCAATCCCGGGGCTCCACAACGGTGTCTTCAG...GATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | AACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGAACCTCACAGTCCTTGTaGGCGCCGAAAACCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: NLPGGGKPSLVARWSLRRTSQSL*APKTLQ Trigger: CTGCAAGGTTTTCGGCGCCCACAAGGACTGTGAGGT...TCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | ACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATTCTGGCGTTTGTAAATaGTGGGCAGAGGGGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: TFPGAGSRAWWRGGLCADSGVCK*WAEGPP Trigger: AGGTGGCCCCTCTGCCCACCATTTACAAACGCCAGA...ATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | CGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTGTCTGCGGCTCCTCCATaGACTGGATGGCGGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: RGGLCADPQHPLAPASGVSAAPP*TGWRTP Trigger: TGGAGTCCGCCATCCAGTCCATGGAGGAGCCGCAGA...CACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | TGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTTCTGCGGCTCCTCCATaGACTGGATGGCGGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: WRGGLCADPQHPLAPASGSAAPP*TGWRTP Trigger: TGGAGTCCGCCATCCAGTCCATGGAGGAGCCGCAGA...ACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR TCA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGTCCCGGGCCAGTGCTTaGAGCAGTTCGCCCTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: LESFIENLPGGGKPSLVASRASA*SSSPLR Trigger: GCGCAAGGGCGAACTGCTTCAAGCACTGGCCCGGGA...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | GGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCTCCTCACACATGAGGTaGTGTTCAGCCTTGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: GREAELGGAVVSAQILSISSHMR*CSALAC Trigger: GCACGCCAAGGCTGAACAGCACCTCATGTGTGAGGA...GATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | AACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGACAGAGAATTGCTCCATaGTCTCATAGCCTGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: NLPGGGKPSLVARWSLRRQRIAP*SHSLAP Trigger: CGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTG...TCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | TGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTCCTGGAAGACGTCGTTaGCACACTTGCGGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: WRGGLCADPQHPLAPASGPGRRR*HTCGTG Trigger: ACCTGTGCCGCAAGTGTGCCAACGACGTCTTCCAGG...ACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | GGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCGGCTGGAAGTCGATaGTTCGCAACATTTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAGSRAWWRGGLCADPQHPAGSR*FATFRP Trigger: TGGCCGAAATGTTGCGAACCATCGACTTCCAGCCGG...ATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | TGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTAAGTTGTCCATGTTGTaGGCATCCCCTAGCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRGGLCADPQHPLAPASGKLSML*ASPSSG Trigger: GCCGCTGCTAGGGGATGCGCACAACATGGACAACTT...ACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTAGGCCCCGCACGCGCTaGAACTTCTCCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGHLSPLLRTFPGAGSRARPRTR*NFSSCS Trigger: GGAGCAGGAGGAGAAGTTGCAGCGCGTGCGGGGCCT...AGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CCA 90 bp | TGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTACCTCACAGTCCTTGTaGGCGCCGAAAACCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRGGLCADPQHPLAPASGTSQSL*APKTLQ Trigger: CTGCAAGGTTTTCGGCGCCCACAAGGACTGTGAGGT...ACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTGCGCTCTGGCGTTTGTAAATaGTGGGCAGAGGGGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLCADPQHPLAPASGVRSGVCK*WAEGPP Trigger: AGGTGGCCCCTCTGCCCACCATTTACAAACGCCAGA...GCGCACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATTCAGGCAGTAGATGTTaGTCTTCTCGTCCTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSRAWWRGGLCADPQHSGSRC*SSRPRA Trigger: AGCACGAGGACGAGAAGATCAACATCTACTGCCTGA...ATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCCTCCTCCATCTGGGTaGTCACTGCCTGCACACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LESFIENLPGGGKPSLVAPPPSG*SLPAHG Trigger: ACCGTGTGCAGGCAGTGATCACCCAGATGGAGGAGG...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTGCGCATCTTCTCGTCCTCGTaGTCCTCACACATGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLCADPQHPLAPASGVRIFSSS*SSHMRC Trigger: GCACCTCATGTGTGAGGAGCACGAGGACGAGAAGAT...GCGCACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGGGGCGCCGAAAACCTTaGAGAGAGAGCAGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LESFIENLPGGGKPSLVAGRRKP*RESRWA Trigger: TGCCCACCTGCTCTCTCTGCAAGGTTTTCGGCGCCC...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | TGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTTGATCAGCTCCTTTaGCTGCTGGAGGTAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRGGLCADPQHPLAPASGVDQLL*LLEVES Trigger: GCTCTCTACCTCCAGCAGGCAAAGGAGCTGATCAAC...ACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATAACATTTCGGCCACGTaGTCCACGCTCACAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSRAWWRGGLCADPQHNISAT*STLTEN Trigger: ATTCTCTGTGAGCGTGGAGCACGTGGCCGAAATGTT...ATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCCTCCAGCCCCGCATTaGCCTCCTCCCCATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLSPLLRTFPGAGSRAWWPPAPH*PPPHPK Trigger: CTTTGGATGGGGAGGAGGGCAATGCGGGGCTGGAGG...CCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTGCGCTTGTCCTCAATGGTCTaGCACACCTCCTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLCADPQHPLAPASGVRLSSMV*HTSSIW Trigger: CCAGATGGAGGAGGTGTGCCAGACCATTGAGGACAA...GCGCACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCCCACCAGCATCGCGATaGCATCGCTCAGCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLLRTFPGAGSRAWWRPPASR*HRSAHS Trigger: AGAGTGAGCTGAGCGATGGCATCGCGATGCTGGTGG...GCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTGCGCACAGTTGCTTCTGTCTaGGGCTGTTGTCCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLCADPQHPLAPASGVRTVASV*GCCPQW Trigger: CCATTGAGGACAACAGCCGCAGACAGAAGCAACTGT...GCGCACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | GCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTACAGTTGCTTCTGTCTaGGGCTGTTGTCCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARWSLRRSSASLGSRFGCTVASV*GCCPQW Trigger: CCATTGAGGACAACAGCCGCAGACAGAAGCAACTGT...ACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGGGCGTTTGTAAATGGTaGGCAGAGGGGCCACCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LESFIENLPGGGKPSLVAGVCKW*AEGPPH Trigger: GTGAGGTGGCCCCTCTGCCCACCATTTACAAACGCC...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCTTGCCCCGACCTTGTTaGTCAGCTCCTTTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLLRTFPGAGSRAWWRLPRPC*SAPLPA Trigger: AGCAGGCAAAGGAGCTGATCAACAAGGTCGGGGCAA...GCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGTCCAGGACAACCTCGTaGCTACAAGATGGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LESFIENLPGGGKPSLVASRTTS*LQDGHR Trigger: CCGATGCCCATCTTGTAGGCACGAGGTTGTCCTGGA...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTCCAGGACAACCTCGTaGCTACAAGATGGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTLESFIENLPGGGKPSSRTTS*LQDGHR Trigger: CCGATGCCCATCTTGTAGGCACGAGGTTGTCCTGGA...GCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTCCTGGAAGACGTCGTTaGCACACTTGCGGCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGHLSPLLRTFPGAGSRAPGRRR*HTCGTG Trigger: ACCTGTGCCGCAAGTGTGCCAACGACGTCTTCCAGG...AGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGGGCGTTTGTAAATGGTaGGCAGAGGGGCCACCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSPLLRTFPGAGSRAWWGVCKW*AEGPPH Trigger: GTGAGGTGGCCCCTCTGCCCACCATTTACAAACGCC...CCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCCAGAGAATTGCTCCATaGTCTCATAGCCTGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLLRTFPGAGSRAWWRQRIAP*SHSLAP Trigger: CGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTG...GCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGAGAGGATTAGAGGCCTaGAAGACGTCGTTGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LESFIENLPGGGKPSLVARGLEA*KTSLAH Trigger: GTGTGCCAACGACGTCTTCCAGGCCTCTAATCCTCT...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | TTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCTTGTCCTCAATGGTCTaGCACACCTCCTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLLRTFPGAGSRAWWRLSSMV*HTSSIW Trigger: CCAGATGGAGGAGGTGTGCCAGACCATTGAGGACAA...GCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CCA 90 bp | GTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTCCGGCTGGAAGTCGATaGTTCGCAACATTTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGHLSPLLRTFPGAGSRAPAGSR*FATFRP Trigger: TGGCCGAAATGTTGCGAACCATCGACTTCCAGCCGG...AGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCAACATTTCGGCCACGTaGTCCACGCTCACAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLLRTFPGAGSRAWWRNISAT*STLTEN Trigger: ATTCTCTGTGAGCGTGGAGCACGTGGCCGAAATGTT...GCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGATGGGGCAAATGAGCTaGTTCTCCAAGTTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LESFIENLPGGGKPSLVAMGQMS*FSKLSM Trigger: CATGGACAACTTGGAGAAGCAGCTCATTTGCCCCAT...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR GCA 90 bp | TTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCATGGGGCAAATGAGCTaGTTCTCCAAGTTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLLRTFPGAGSRAWWRMGQMS*FSKLSM Trigger: CATGGACAACTTGGAGAAGCAGCTCATTTGCCCCAT...GCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCCCGGGCCAGTGCTaGAAGCAGTTCGCCCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSRGREAELGGAVVSAQILPGQC*KQFALA Trigger: CGCAAGGGCGAACTGCTTCAAGCACTGGCCCGGGAG...GATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | CCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCATCCTCCAGCCCCGCATaGCCCTCCTCCCCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGGGKPSLVARWSLRRSSSSSPA*PSSPSK Trigger: TTTGGATGGGGAGGAGGGCAATGCGGGGCTGGAGGA...TGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | AACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGAGCCTGGAAGACGTCGTaGGCACACTTGCGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLPGGGKPSLVARWSLRRAWKTS*AHLRHR Trigger: CCTGTGCCGCAAGTGTGCCAACGACGTCTTCCAGGC...TCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCTGTGGAGCCCCGGGATaGCCACAGAGGATTAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSRGREAELGGAVVSAQICGAPG*PQRIRG Trigger: GCCTCTAATCCTCTGTGGCAATCCCGGGGCTCCACA...GATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | TTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCTCCTGAAGACACCGTaGTGGAGCCCCGGGATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPGAGSRAWWRGGLCADPLLKTP*WSPGIA Trigger: GGCAATCCCGGGGCTCCACAACGGTGTCTTCAGGAG...AGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CAA 90 bp | GGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCGCCTGGAAGACGTCGTaGGCACACTTGCGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GREAELGGAVVSAQILSIAWKTS*AHLRHR Trigger: CCTGTGCCGCAAGTGTGCCAACGACGTCTTCCAGGC...GATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | ACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATTGTGGAGCCCCGGGATaGCCACAGAGGATTAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TFPGAGSRAWWRGGLCADCGAPG*PQRIRG Trigger: GCCTCTAATCCTCTGTGGCAATCCCGGGGCTCCACA...ATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CAA 90 bp | GGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCTCCTGAAGACACCGTaGTGGAGCCCCGGGATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GREAELGGAVVSAQILSILLKTP*WSPGIA Trigger: GGCAATCCCGGGGCTCCACAACGGTGTCTTCAGGAG...GATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CAA 90 bp | AACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGAGCCACCTCACAGTCCTaGTGGGCGCCGAAAACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NLPGGGKPSLVARWSLRRATSQS*WAPKTL Trigger: CAAGGTTTTCGGCGCCCACAAGGACTGTGAGGTGGC...TCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CAA 90 bp | TCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCATTGCCCCGACCTTGTaGATCAGCTCCTTTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRGREAELGGAVVSAQILIAPTL*ISSFAC Trigger: GCAGGCAAAGGAGCTGATCAACAAGGTCGGGGCAAT...GAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS GCA 90 bp | GCAGGCCTTCTGGCACGTCCAGCCGCTCCTCCTCCAGCCCCGCATTaGCCTCCTCCCCATCCAAAGCCATGTCGTCATCCTCTTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGLLARPAAPPPAPH*PPPHPKPCRHPLHP Trigger: GGGATGAAGAGGATGACGACATGGCTTTGGATGGGGAGGAGGGCAATGCGGGGCTGGAGGAGGAGCGGCTGGACGTGCCAGAAGGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202769.2 |
||
| CDS-3UTR CAA 90 bp | AACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGAATTGCCCCGACCTTGTaGATCAGCTCCTTTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NLPGGGKPSLVARWSLRRIAPTL*ISSFAC Trigger: GCAGGCAAAGGAGCTGATCAACAAGGTCGGGGCAAT...TCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS GCA 90 bp | CTGAGCCTTCTGGCACGTCCAGCCGCTCCTCCTCCAGCCCCGCATTaGCCTCCTCCCCATCCAAAGCCATGTCGTCATCCTCTTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLARPAAPPPAPH*PPPHPKPCRHPLHP Trigger: GGGATGAAGAGGATGACGACATGGCTTTGGATGGGGAGGAGGGCAATGCGGGGCTGGAGGAGGAGCGGCTGGACGTGCCAGAAGGCTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013771.15 |
||
| CDS-3UTR CAA 90 bp | CGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTGTCCCCTAGCAGCGGCTaGAAACCCACCGTGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGGLCADPQHPLAPASGVSPSSG*KPTVKF Trigger: GAACTTCACGGTGGGTTTCAAGCCGCTGCTAGGGGA...CACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
||
| CDS-3UTR CAA 90 bp | GCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCCTTGGCTCCCGCTTCGGGTGTCACTTGCGGCACAGGTaGTGTTGGCAGGGCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: ARWSLRRSSASLGSRFGCHLRHR*CWQGKI Trigger: GATCTTGCCCTGCCAACACAACCTGTGCCGCAAGTG...ACACCCGAAGCGGGAGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS TCA 90 bp | CCGGCCGTCCTGCCAGCTCCACCTTCGACATTGCCCCGACCTTGTTaGTCAGCTCCTTTGCCTGCTGGAGGTAGAGAGCCATCTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAVLPAPPSTLPRPC*SAPLPAGGREPSAA Trigger: AGCCGCAGATGGCTCTCTACCTCCAGCAGGCAAAGGAGCTGATCAACAAGGTCGGGGCAATGTCGAAGGTGGAGCTGGCAGGACGGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 90 bp | CACGTGCTCCACGCTCACAGAGAATTGCTCCATGCTCTCATAGCCTaGCTCCGGCCGTCCTGCCAGCTCCACCTTCGACATTGCCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: HVLHAHRELLHALIA*LRPSCQLHLRHCPD Trigger: GTCGGGGCAATGTCGAAGGTGGAGCTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTGTGAGCGTGGAGCACGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | GTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTCTCCCGGGCCAGTGCTaGAAGCAGTTCGCCCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VGHLSPLLRTFPGAGSRALPGQC*KQFALA Trigger: CGCAAGGGCGAACTGCTTCAAGCACTGGCCCGGGAG...AGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | GGGCGGGAAGCCGAGCTTGGTGGCGCGGTGGTCTCTGCGCAGATCCTCAGCATCCACGCTCACAGAGAATaGCTCCATGCTCTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GREAELGGAVVSAQILSIHAHRE*LHALIA Trigger: GGCTATGAGAGCATGGAGCAATTCTCTGTGAGCGTG...GATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTCGGCTTCCCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 90 bp | GCAACATTTCGGCCACGTGCTCCACGCTCACAGAGAATTGCTCCATaGTCTCATAGCCTGGCTCCGGCCGTCCTGCCAGCTCCACCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ATFRPRAPRSQRIAP*SHSLAPAVLPAPPS Trigger: CGAAGGTGGAGCTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTGTGAGCGTGGAGCACGTGGCCGAAATGTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 90 bp | TCCAAAGCCATGTCGTCATCCTCTTCATCCCCAGCGGCGCCCGGCTaGAAGTCGATGGTTCGCAACATTTCGGCCACGTGCTCCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKAMSSSSSSPAAPG*KSMVRNISATCSTL Trigger: GAGCGTGGAGCACGTGGCCGAAATGTTGCGAACCATCGACTTCCAGCCGGGCGCCGCTGGGGATGAAGAGGATGACGACATGGCTTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGGCCACCTCACAGTCCTaGTGGGCGCCGAAAACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LESFIENLPGGGKPSLVAATSQS*WAPKTL Trigger: CAAGGTTTTCGGCGCCCACAAGGACTGTGAGGTGGC...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 90 bp | ACTTCTCCTCCTGCTCCCGGGCCAGTGCTTGAAGCAGTTCGCCCTTaGGCTCCTCCAAAACCGCGCACAGGGTCTCGAACCTCTGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSPPAPGPVLEAVRP*APPKPRTGSRTSGL Trigger: TAAACCAGAGGTTCGAGACCCTGTGCGCGGTTTTGGAGGAGCGCAAGGGCGAACTGCTTCAAGCACTGGCCCGGGAGCAGGAGGAGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 90 bp | CACAGAGAATTGCTCCATGCTCTCATAGCCTGGCTCCGGCCGTCCTaGCAGCTCCACCTTCGACATTGCCCCGACCTTGTTGATCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRELLHALIAWLRPS*QLHLRHCPDLVDQL Trigger: GAGCTGATCAACAAGGTCGGGGCAATGTCGAAGGTGGAGCTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 90 bp | TGTCGTCATCCTCTTCATCCCCAGCGGCGCCCGGCTGGAAGTCGATaGTTCGCAACATTTCGGCCACGTGCTCCACGCTCACAGAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: CRHPLHPQRRPAGSR*FATFRPRAPRSQRI Trigger: AATTCTCTGTGAGCGTGGAGCACGTGGCCGAAATGTTGCGAACCATCGACTTCCAGCCGGGCGCCGCTGGGGATGAAGAGGATGACGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | GTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTCCCCTAGCAGCGGCTaGAAACCCACCGTGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGHLSPLLRTFPGAGSRASPSSG*KPTVKF Trigger: GAACTTCACGGTGGGTTTCAAGCCGCTGCTAGGGGA...AGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | TTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGCTCCAAGTTGTCCATGTaGTGCGCATCCCCTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSPLLRTFPGAGSRAWWRSKLSM*CASPSS Trigger: GCTGCTAGGGGATGCGCACAACATGGACAACTTGGA...GCGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | CACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGTCCAAGTTGTCCATGTaGTGCGCATCCCCTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLSPLLRTFPGAGSRAWWSKLSM*CASPSS Trigger: GCTGCTAGGGGATGCGCACAACATGGACAACTTGGA...CCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGAGCTTGGTGGCGAGCTGCTTCTCCAAGTaGTCCATGTTGTGCGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LESFIENLPGGGKPSLVASCFSK*SMLCAS Trigger: GGATGCGCACAACATGGACAACTTGGAGAAGCAGCT...CGCCACCAAGCTCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS TCA 90 bp | CAGGACAACCTCGTGCCTACAAGATGGGCATCGGAAACGTCCTCCTaGAGACACCGTTGTGGAGCCCCGGGATTGCCACAGAGGATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QDNLVPTRWASETSS*RHRCGAPGLPQRIR Trigger: TCTAATCCTCTGTGGCAATCCCGGGGCTCCACAACGGTGTCTTCAGGAGGACGTTTCCGATGCCCATCTTGTAGGCACGAGGTTGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 90 bp | TCGCCCTTGCGCTCCTCCAAAACCGCGCACAGGGTCTCGAACCTCTaGTTTAACAGTTGCTTCTGTCTGCGGCTGTTGTCCTCAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLRSSKTAHRVSNL*FNSCFCLRLLSSMV Trigger: GACCATTGAGGACAACAGCCGCAGACAGAAGCAACTGTTAAACCAGAGGTTCGAGACCCTGTGCGCGGTTTTGGAGGAGCGCAAGGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS-3UTR CAA 90 bp | GACGTGGGACACTTGAGTCCTTTATTGAGAACCTTCCCGGGGGCGGGAAGCCGACACGCTCACAGAGAATaGCTCCATGCTCTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DVGHLSPLLRTFPGAGSRHAHRE*LHALIA Trigger: GGCTATGAGAGCATGGAGCAATTCTCTGTGAGCGTG...TCGGCTTCCCGCCCCCGGGAAGGTTCTCAATAAAGGACTCAAGTGTCCCACGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202769.2 |
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| CDS GCA 90 bp | TCCTCCAAAACCGCGCACAGGGTCTCGAACCTCTGGTTTAACAGTTaGTTCTGTCTGCGGCTGTTGTCCTCAATGGTCTGGCACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKTAHRVSNLWFNS*FCLRLLSSMVWHTS Trigger: GGAGGTGTGCCAGACCATTGAGGACAACAGCCGCAGACAGAAGCAACTGTTAAACCAGAGGTTCGAGACCCTGTGCGCGGTTTTGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 72 bp | ATGGCGGACTCCACCAGCTTTGAGGAGCCCTCCAAGTaGTCTCCGTACTGGCGGATGAGGCCCCGCACGCGC | + |
|
Preference number: 6 (lower is better) Translates to: MADSTSFEEPSK*SPYWRMRPRTR Trigger: GCGCGTGCGGGGCCTCATCCGCCAGTACGGAGACCACTTGGAGGGCTCCTCAAAGCTGGTGGAGTCCGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | CCTGCTCCCGGGCCAGTGCTTGAAGCAGTTCGCCCTTaGGCTCCTCCAAAACCGCGCACAGGGTCTCGAACC | + |
|
Preference number: 6 (lower is better) Translates to: PAPGPVLEAVRP*APPKPRTGSRT Trigger: GGTTCGAGACCCTGTGCGCGGTTTTGGAGGAGCGCAAGGGCGAACTGCTTCAAGCACTGGCCCGGGAGCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS TCA 72 bp | TTGAGGAGCCCTCCAAGTGGTCTCCGTACTGGCGGATaGGGCCCCGCACGCGCTGCAACTTCTCCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRSPPSGLRTGG*GPARAATSPPA Trigger: AGCAGGAGGAGAAGTTGCAGCGCGTGCGGGGCCTCATCCGCCAGTACGGAGACCACTTGGAGGGCTCCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | CGGCCACGTGCTCCACGCTCACAGAGAATTGCTCCATaGTCTCATAGCCTGGCTCCGGCCGTCCTGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPRAPRSQRIAP*SHSLAPAVLPA Trigger: AGCTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTGTGAGCGTGGAGCACGTGGCCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 72 bp | ACCAGCTTTGAGGAGCCCTCCAAGTGGTCTCCGTACTaGCGGATGAGGCCCCGCACGCGCTGCAACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSFEEPSKWSPY*RMRPRTRCNFS Trigger: GGAGAAGTTGCAGCGCGTGCGGGGCCTCATCCGCCAGTACGGAGACCACTTGGAGGGCTCCTCAAAGCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 72 bp | CCTCTTCATCCCCAGCGGCGCCCGGCTGGAAGTCGATaGTTCGCAACATTTCGGCCACGTGCTCCACGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLHPQRRPAGSR*FATFRPRAPRS Trigger: TGAGCGTGGAGCACGTGGCCGAAATGTTGCGAACCATCGACTTCCAGCCGGGCGCCGCTGGGGATGAAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | TTGCTCCATGCTCTCATAGCCTGGCTCCGGCCGTCCTaGCAGCTCCACCTTCGACATTGCCCCGACCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLHALIAWLRPS*QLHLRHCPDLV Trigger: AACAAGGTCGGGGCAATGTCGAAGGTGGAGCTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATGGAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 72 bp | ATGTCGTCATCCTCTTCATCCCCAGCGGCGCCCGGCTaGAAGTCGATGGTTCGCAACATTTCGGCCACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MSSSSSSPAAPG*KSMVRNISATC Trigger: GCACGTGGCCGAAATGTTGCGAACCATCGACTTCCAGCCGGGCGCCGCTGGGGATGAAGAGGATGACGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CAA 90 bp | GATGGTTCGCAACATTTCGGCCACGTGCTCCACGCTCACAGAGAATaGCTCCATGCTCTCATAGCCTGGCTCCGGCCGTCCTGCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DGSQHFGHVLHAHRE*LHALIAWLRPSCQL Trigger: GAGCTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTGTGAGCGTGGAGCACGTGGCCGAAATGTTGCGAACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS TCA 72 bp | CTCGTGCCTACAAGATGGGCATCGGAAACGTCCTCCTaGAGACACCGTTGTGGAGCCCCGGGATTGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LVPTRWASETSS*RHRCGAPGLPQ Trigger: CTGTGGCAATCCCGGGGCTCCACAACGGTGTCTTCAGGAGGACGTTTCCGATGCCCATCTTGTAGGCACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | CGTCCTCCTGAAGACACCGTTGTGGAGCCCCGGGATTaGCACAGAGGATTAGAGGCCTGGAAGACGTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPPEDTVVEPRD*HRGLEAWKTSL Trigger: CAACGACGTCTTCCAGGCCTCTAATCCTCTGTGGCAATCCCGGGGCTCCACAACGGTGTCTTCAGGAGGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | TTGATCTTCTCGTCCTCGTGCTCCTCACACATGAGGTaGTGTTCAGCCTTGGCGTGCAGTGGCCGGGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LIFSSSCSSHMR*CSALACSGRED Trigger: GTCCTCCCGGCCACTGCACGCCAAGGCTGAACAGCACCTCATGTGTGAGGAGCACGAGGACGAGAAGATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 72 bp | CATCGCTCAGCTCACTCTTCTGGCGTTTGTAAATGGTaGGCAGAGGGGCCACCTCACAGTCCTTGTGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: HRSAHSSGVCKW*AEGPPHSPCGR Trigger: GCGCCCACAAGGACTGTGAGGTGGCCCCTCTGCCCACCATTTACAAACGCCAGAAGAGTGAGCTGAGCGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 72 bp | CACGCTCACAGAGAATTGCTCCATGCTCTCATAGCCTaGCTCCGGCCGTCCTGCCAGCTCCACCTTCGACAT | + |
|
Preference number: 6 (lower is better) Translates to: HAHRELLHALIA*LRPSCQLHLRH Trigger: ATGTCGAAGGTGGAGCTGGCAGGACGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTGTGAGCGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CAA 72 bp | CAACATTTCGGCCACGTGCTCCACGCTCACAGAGAATaGCTCCATGCTCTCATAGCCTGGCTCCGGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QHFGHVLHAHRE*LHALIAWLRPS Trigger: GGACGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCTCTGTGAGCGTGGAGCACGTGGCCGAAATGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS TCA 72 bp | CTGCCAGCTCCACCTTCGACATTGCCCCGACCTTGTTaGTCAGCTCCTTTGCCTGCTGGAGGTAGAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPAPPSTLPRPC*SAPLPAGGREP Trigger: TGGCTCTCTACCTCCAGCAGGCAAAGGAGCTGATCAACAAGGTCGGGGCAATGTCGAAGGTGGAGCTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | CTTCGACATTGCCCCGACCTTGTTGATCAGCTCCTTTaGCTGCTGGAGGTAGAGAGCCATCTGCGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRHCPDLVDQLL*LLEVESHLRLL Trigger: GAGGAGCCGCAGATGGCTCTCTACCTCCAGCAGGCAAAGGAGCTGATCAACAAGGTCGGGGCAATGTCGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 72 bp | TGCCATCGCTCAGCTCACTCTTCTGGCGTTTGTAAATaGTGGGCAGAGGGGCCACCTCACAGTCCTTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CHRSAHSSGVCK*WAEGPPHSPCG Trigger: CCCACAAGGACTGTGAGGTGGCCCCTCTGCCCACCATTTACAAACGCCAGAAGAGTGAGCTGAGCGATGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS CCA 72 bp | CGCTCCTCCAAAACCGCGCACAGGGTCTCGAACCTCTaGTTTAACAGTTGCTTCTGTCTGCGGCTGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSSKTAHRVSNL*FNSCFCLRLLS Trigger: GGACAACAGCCGCAGACAGAAGCAACTGTTAAACCAGAGGTTCGAGACCCTGTGCGCGGTTTTGGAGGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | ACCGCGCACAGGGTCTCGAACCTCTGGTTTAACAGTTaGTTCTGTCTGCGGCTGTTGTCCTCAATGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TAHRVSNLWFNS*FCLRLLSSMVW Trigger: CCAGACCATTGAGGACAACAGCCGCAGACAGAAGCAACTGTTAAACCAGAGGTTCGAGACCCTGTGCGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | GGCTGGAAGTCGATGGTTCGCAACATTTCGGCCACGTaGTCCACGCTCACAGAGAATTGCTCCATGCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GWKSMVRNISAT*STLTENCSMLS Trigger: TGAGAGCATGGAGCAATTCTCTGTGAGCGTGGAGCACGTGGCCGAAATGTTGCGAACCATCGACTTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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| CDS GCA 72 bp | GGGTCTCGAACCTCTGGTTTAACAGTTGCTTCTGTCTaGGGCTGTTGTCCTCAATGGTCTGGCACACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSRTSGLTVASV*GCCPQWSGTPP Trigger: AGGAGGTGTGCCAGACCATTGAGGACAACAGCCGCAGACAGAAGCAACTGTTAAACCAGAGGTTCGAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013771.15 ENSMUST00000202769.2 |
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