Pregenerated sensors for TRIM47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020773Ensembl transcript IDs: ENSMUST00000021120.6, ENSMUST00000106441.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TCTAGAAGGCCTCAAGAAGTGAGGTGGCTAGGAGTGTaGGAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SRRPQEVRWLGV*ESLRLVPSPSK Trigger: TTTGCTAGGGGAAGGCACTAGCCTCAGAGACTCCCACACTCCTAGCCACCTCACTTCTTGAGGCCTTCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| 3UTR CCA 72 bp | TGCCAGGTAGTTCTAGAGACCTGGAAAAGAAGGGGCTaGGGCAGACTGGAGTTGTCCCAGCTAAAGATCTGT | + |
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Preference number: 3 (lower is better) Translates to: CQVVLETWKRRG*GRLELSQLKIC Trigger: ACAGATCTTTAGCTGGGACAACTCCAGTCTGCCCCAGCCCCTTCTTTTCCAGGTCTCTAGAACTACCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCGCGGGGCTGCGTTCGTaGGGGGCCAGATGCGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTAGLRS*GARCAE Trigger: CTCCGCGCATCTGGCCCCCCACGAACGCAGCCCCGC...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGAGGCCAGAGCACCGCTaGGGCGAGGCCGGGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRRPEHR*GEAGRL Trigger: AAGCCTCCCGGCCTCGCCGCAGCGGTGCTCTGGCCT...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGAAGCCGGGGCGGACATaGGTCCCGGGACCGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRKPGRT*VPGPSP Trigger: AGGGCTCGGTCCCGGGACCCATGTCCGCCCCGGCTT...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGGCGGGGCTGCGTTCGTaGGGGGCCAGATGCGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMAGLRS*GARCAE Trigger: CTCCGCGCATCTGGCCCCCCACGAACGCAGCCCCGC...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGGGCAGATGGGGCAGCTaGAAGGCCCGCTGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRGRWGS*KARCRP Trigger: TGGACGGCAGCGGGCCTTTCAGCTGCCCCATCTGCC...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGGACTGCTCCACCTCCTaGAGCGCGCGCTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRDCSTS*SARSCS Trigger: GGAGCAGGAGCGCGCGCTTCAGGAGGTGGAGCAGTC...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGAGGCCAGAGCACCGCTaGGGCGAGGCCGGGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMRPEHR*GEAGRL Trigger: AAGCCTCCCGGCCTCGCCGCAGCGGTGCTCTGGCCT...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGAAGCCGGGGCGGACATaGGTCCCGGGACCGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMKPGRT*VPGPSP Trigger: AGGGCTCGGTCCCGGGACCCATGTCCGCCCCGGCTT...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGGGCAGATGGGGCAGCTaGAAGGCCCGCTGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMGRWGS*KARCRP Trigger: TGGACGGCAGCGGGCCTTTCAGCTGCCCCATCTGCC...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGTGGCCGCGATGGTCCTaGGTGGCACAGGCCTCGCAA | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRWPRWS*VAQASQ Trigger: TTGCGAGGCCTGTGCCACTCAGGACCATCGCGGCCA...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGGAGCCCTGGCGGAGCTaGAGCAACTCGGACAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHREPWRS*SNSDSV Trigger: CACGCTGTCCGAGTTGCTGCAGCTCCGCCAGGGCTC...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGCCTCCCAGTAGTAGGTaGCCCGGTCCAGGGCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMPPSSR*PGPGRP Trigger: AGGGCGCCCTGGACCGGGGCACCTACTACTGGGAGG...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGAGCATGAGTGTGCATTaGGGCCCAGCCGGCCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRSMSVH*GPAGPG Trigger: ACCGGGGCCGGCTGGGCCGCAATGCACACTCATGCT...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCGAGGCCGGGAGGCTTTaGGCCTCCGAAGAAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTEAGRL*ASEEGS Trigger: TGAGCCTTCTTCGGAGGCTCAAAGCCTCCCGGCCTC...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGGAGGCCGGGAGGCTTTaGGCCTCCGAAGAAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHREAGRL*ASEEGS Trigger: TGAGCCTTCTTCGGAGGCTCAAAGCCTCCCGGCCTC...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCTGGTTCTTGCGGAGCTaGAGGCCGTCGGGGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTWFLRS*RPSGKG Trigger: GCCTTTCCCCGACGGCCTGCAGCTCCGCAAGAACCA...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGGAGCCCTGGCGGAGCTaGAGCAACTCGGACAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMEPWRS*SNSDSV Trigger: CACGCTGTCCGAGTTGCTGCAGCTCCGCCAGGGCTC...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGAGCATGAGTGTGCATTaGGGCCCAGCCGGCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMSMSVH*GPAGPG Trigger: ACCGGGGCCGGCTGGGCCGCAATGCACACTCATGCT...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCCTGGCTGGCACAGGCTaGGATGAGGGTGTCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTLAGTG*DEGVSH Trigger: GTGAGAGACACCCTCATCTCAGCCTGTGCCAGCCAG...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGCCACTGCAGACAGCATaGGTGTGCATTGCGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRPLQTA*VCIAAQ Trigger: CTGGGCCGCAATGCACACTCATGCTGTCTGCAGTGG...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCCCACTGCAGACAGCATaGGTGTGCATTGCGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTPLQTA*VCIAAQ Trigger: CTGGGCCGCAATGCACACTCATGCTGTCTGCAGTGG...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGCTGTCCAGGCGACTCTaGAAAGGGTCAGTGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRLSRRL*KGSVGE Trigger: CTCCCCCACTGACCCTTTTCAGAGTCGCCTGGACAG...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGTGGTTCTTGCGGAGCTaGAGGCCGTCGGGGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMWFLRS*RPSGKG Trigger: GCCTTTCCCCGACGGCCTGCAGCTCCGCAAGAACCA...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCGCCTCGGCAAACATCTaGCTCACCCTCTCCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTASANI*LTLSRS Trigger: AGAGCGGGAGAGGGTGAGCCAGATGTTTGCCGAGGC...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCCTACGCAGGTCACCCTaGGACCGGCCCAACATTGTG | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTLRRSP*DRPNIV Trigger: CACAATGTTGGGCCGGTCCCAGGGTGACCTGCGTAG...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGCTACGCAGGTCACCCTaGGACCGGCCCAACATTGTG | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRLRRSP*DRPNIV Trigger: CACAATGTTGGGCCGGTCCCAGGGTGACCTGCGTAG...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGTCTGAAAAGGGTCAGTaGGGGAGGCCAGAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRSEKGQ*GRPEHR Trigger: GCGGTGCTCTGGCCTCCCCCACTGACCCTTTTCAGA...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCTGTCTCTCACCGCTTTaGCCACCTGGGAGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTCLSPL*PPGRTW Trigger: CCAAGTCCTCCCAGGTGGTCAAAGCGGTGAGAGACA...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGTGTCTCTCACCGCTTTaGCCACCTGGGAGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRCLSPL*PPGRTW Trigger: CCAAGTCCTCCCAGGTGGTCAAAGCGGTGAGAGACA...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCTGGCACAGGCTGAGATaGGGGTGTCTCTCACCGCTT | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTWHRLR*GCLSPL Trigger: AAGCGGTGAGAGACACCCTCATCTCAGCCTGTGCCA...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGTGGCACAGGCTGAGATaGGGGTGTCTCTCACCGCTT | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRWHRLR*GCLSPL Trigger: AAGCGGTGAGAGACACCCTCATCTCAGCCTGTGCCA...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGCTGGCTGGCACAGGCTaGGATGAGGGTGTCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMLAGTG*DEGVSH Trigger: GTGAGAGACACCCTCATCTCAGCCTGTGCCAGCCAG...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGAACTCGGACAGCGTGTaGTTCTTGCGGAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRNSDSV*FLRSCR Trigger: CCTGCAGCTCCGCAAGAACCACACGCTGTCCGAGTT...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGGCCTCGGCAAACATCTaGCTCACCCTCTCCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMASANI*LTLSRS Trigger: AGAGCGGGAGAGGGTGAGCCAGATGTTTGCCGAGGC...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGGGTCCAATCTGCAGATaGGCGTCCACACTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRGPICR*ASTLSR Trigger: CCTGGAGAGTGTGGACGCCCATCTGCAGATTGGACC...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGTCGTTCTGGAAACTCTaGAGGGTGGCTGTGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMSFWKL*RVAVAS Trigger: CGAGGCCACAGCCACCCTTCAGAGTTTCCAGAACGA...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCCCTCTCCCTCTTCGATaGACCCCATCACCTCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTPLPLR*TPSPRS Trigger: AGAACGAGGTGATGGGGTTCATCGAAGAGGGAGAGG...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGCTGGAGAAAGCTGACTaGATCCGCCTCTGGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRLEKAD*IRLWNL Trigger: CAGGTTCCAGAGGCGGATTCAGTCAGCTTTCTCCAG...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGCACCCTCTCCCGCTCTaGCACAGCTGCACTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMHPLPL*HSCTLD Trigger: ATCAAGAGTGCAGCTGTGGCAGAGCGGGAGAGGGTG...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCCAGCGCTCAGGACTTTaGACTGCTCCACCTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTQRSGL*TAPPPE Trigger: TTCAGGAGGTGGAGCAGTCCAAAGTCCTGAGCGCTG...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGCCTCTCCCTCTTCGATaGACCCCATCACCTCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMPLPLR*TPSPRS Trigger: AGAACGAGGTGATGGGGTTCATCGAAGAGGGAGAGG...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGCTGGAGAAAGCTGACTaGATCCGCCTCTGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMLEKAD*IRLWNL Trigger: CAGGTTCCAGAGGCGGATTCAGTCAGCTTTCTCCAG...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCCGATGTAGGCAAACTTaGGGAAGTAATCCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTRCRQT*GSNPWG Trigger: CCCCCAGGGATTACTTCCTCAAGTTTGCCTACATCG...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGCGATGTAGGCAAACTTaGGGAAGTAATCCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRRCRQT*GSNPWG Trigger: CCCCCAGGGATTACTTCCTCAAGTTTGCCTACATCG...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGCAGCGCTCAGGACTTTaGACTGCTCCACCTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMQRSGL*TAPPPE Trigger: TTCAGGAGGTGGAGCAGTCCAAAGTCCTGAGCGCTG...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCAGTGCCAGGAGCTCCTaGAGAAAGCTGACTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTSARSS*RKLTES Trigger: GGATTCAGTCAGCTTTCTCCAGGAGCTCCTGGCACT...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCGCTTTGACCACCTaGGAGGACTTGGTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMTALTT*EDLVKL Trigger: CAGCTTCACCAAGTCCTCCCAGGTGGTCAAAGCGGT...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGGCAGGCTTGAGCCTGTaGTTGAAGAGCCCGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRAGLSL*LKSPEK Trigger: TTTTTCCGGGCTCTTCAACCACAGGCTCAAGCCTGC...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCGTACTGTCAGGGTCCTaGGACTCCACATCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTVLSGS*DSTSSE Trigger: CTCAGAAGATGTGGAGTCCCAGGACCCTGACAGTAC...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGAGTGCCAGGAGCTCCTaGAGAAAGCTGACTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMSARSS*RKLTES Trigger: GGATTCAGTCAGCTTTCTCCAGGAGCTCCTGGCACT...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGGTACTGTCAGGGTCCTaGGACTCCACATCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMVLSGS*DSTSAS Trigger: AGAAGCAGATGTGGAGTCCCAGGACCCTGACAGTAC...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021120.6 |
||
| CDS-3UTR CCA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGGCAGGCTTGAGCCTGTaGTTGAAGAGCCCGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMAGLSL*LKSPEK Trigger: TTTTTCCGGGCTCTTCAACCACAGGCTCAAGCCTGC...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR GCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCTTAGTTCCAAAAAGCTaGAGGAACTTGTCCGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTLVPKS*RNLSAV Trigger: CACCGCGGACAAGTTCCTGCAGCTTTTTGGAACTAA...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCTTATGCACGATTTCTTaGGAGGTCCAATCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTLCTIS*EVQSAD Trigger: ATCTGCAGATTGGACCTCTCAAGAAATCGTGCATAA...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 90 bp | TGCGCTGGGCGCGGAGGGCTCGGGCGTGGCGCCCCGGGTCGATCCTaGAGCCGGGGCGGACATGGGTCCCGGGACCGAGCCCTGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CAGRGGLGRGAPGRS*SRGGHGSRDRALAE Trigger: CTCCGCCAGGGCTCGGTCCCGGGACCCATGTCCGCCCCGGCTTCAGGATCGACCCGGGGCGCCACGCCCGAGCCCTCCGCGCCCAGCGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 90 bp | CGGCTCCTCACCCGCGGGCCACTGCTCCGGCGCGCAGGGAGCCGATaGTTCCGGAGCCGGAGGTGGTGCGCTGGGCGCGGAGGGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLTRGPLLRRAGSR*FRSRRWCAGRGGLG Trigger: CCCGAGCCCTCCGCGCCCAGCGCACCACCTCCGGCTCCGGAACCATCGGCTCCCTGCGCGCCGGAGCAGTGGCCCGCGGGTGAGGAGCCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | TCGGGGCACGCGTCGCAGCGCACCGGCTCCTCACCCGCGGGCCACTaGTCCGGCGCGCAGGGAGCCGATGGTTCCGGAGCCGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGHASQRTGSSPAGH*SGAQGADGSGAGGG Trigger: ACCACCTCCGGCTCCGGAACCATCGGCTCCCTGCGCGCCGGAGCAGTGGCCCGCGGGTGAGGAGCCGGTGCGCTGCGACGCGTGCCCCGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 90 bp | GCTCGGGCGTGGCGCCCCGGGTCGATCCTGAAGCCGGGGCGGACATaGGTCCCGGGACCGAGCCCTGGCGGAGCTGCAGCAACTCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ARAWRPGSILKPGRT*VPGPSPGGAAATRT Trigger: TGTCCGAGTTGCTGCAGCTCCGCCAGGGCTCGGTCCCGGGACCCATGTCCGCCCCGGCTTCAGGATCGACCCGGGGCGCCACGCCCGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | CAGCGAGCTGGACCTCCGGAACCACCGGTGCCGCCCGCGCTCCGGTaGGGCCAGAGAGCGCCCAGGCAAGCGAGGCAGAAGTTGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QRAGPPEPPVPPALR*GQRAPRQARQKLWP Trigger: CGGCCACAACTTCTGCCTCGCTTGCCTGGGCGCTCTCTGGCCGCACCGGAGCGCGGGCGGCACCGGTGGTTCCGGAGGTCCAGCTCGCTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | GCTCCTGACAAAGTGGACAGCGAGCTGGACCTCCGGAACCACCGGTaGCGCCCGCGCTCCGGTGCGGCCAGAGAGCGCCCAGGCAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: APDKVDSELDLRNHR*RPRSGAARERPGKR Trigger: TCGCTTGCCTGGGCGCTCTCTGGCCGCACCGGAGCGCGGGCGGCACCGGTGGTTCCGGAGGTCCAGCTCGCTGTCCACTTTGTCAGGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | GAAGCCGGGGCGGACATGGGTCCCGGGACCGAGCCCTGGCGGAGCTaGAGCAACTCGGACAGCGTGTGGTTCTTGCGGAGCTGCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EAGADMGPGTEPWRS*SNSDSVWFLRSCRP Trigger: CGGCCTGCAGCTCCGCAAGAACCACACGCTGTCCGAGTTGCTGCAGCTCCGCCAGGGCTCGGTCCCGGGACCCATGTCCGCCCCGGCTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 90 bp | CTGCAGGCCGTCGGGGAAAGGCTCCTGACAAAGTGGACAGCGAGCTaGACCTCCGGAACCACCGGTGCCGCCCGCGCTCCGGTGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQAVGERLLTKWTAS*TSGTTGAARAPVRP Trigger: TGGCCGCACCGGAGCGCGGGCGGCACCGGTGGTTCCGGAGGTCCAGCTCGCTGTCCACTTTGTCAGGAGCCTTTCCCCGACGGCCTGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 90 bp | GCGCGCTCCTGCTCCAGCGGCACGAGCTCGTGGCCGCGATGGTCCTaGGTGGCACAGGCCTCGCAAAGGCACACACGCTCCACGCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ARSCSSGTSSWPRWS*VAQASQRHTRSTRQ Trigger: CTGTCGCGTGGAGCGTGTGTGCCTTTGCGAGGCCTGTGCCACTCAGGACCATCGCGGCCACGAGCTCGTGCCGCTGGAGCAGGAGCGCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 90 bp | GTCGATCCTGAAGCCGGGGCGGACATGGGTCCCGGGACCGAGCCCTaGCGGAGCTGCAGCAACTCGGACAGCGTGTGGTTCTTGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VDPEAGADMGPGTEP*RSCSNSDSVWFLRS Trigger: GCTCCGCAAGAACCACACGCTGTCCGAGTTGCTGCAGCTCCGCCAGGGCTCGGTCCCGGGACCCATGTCCGCCCCGGCTTCAGGATCGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 90 bp | GTTCTTGCGGAGCTGCAGGCCGTCGGGGAAAGGCTCCTGACAAAGTaGACAGCGAGCTGGACCTCCGGAACCACCGGTGCCGCCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLAELQAVGERLLTK*TASWTSGTTGAARA Trigger: AGCGCGGGCGGCACCGGTGGTTCCGGAGGTCCAGCTCGCTGTCCACTTTGTCAGGAGCCTTTCCCCGACGGCCTGCAGCTCCGCAAGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 90 bp | AGCGTGTGGTTCTTGCGGAGCTGCAGGCCGTCGGGGAAAGGCTCCTaGCAAAGTGGACAGCGAGCTGGACCTCCGGAACCACCGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SVWFLRSCRPSGKGS*QSGQRAGPPEPPVP Trigger: CGGCACCGGTGGTTCCGGAGGTCCAGCTCGCTGTCCACTTTGTCAGGAGCCTTTCCCCGACGGCCTGCAGCTCCGCAAGAACCACACGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 90 bp | CAGTGGGGGAGGCCAGAGCACCGCTGCGGCGAGGCCGGGAGGCTTTaGGCCTCCGAAGAAGGCTCAGCTTTCCGTCTCGGACAGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: QWGRPEHRCGEAGRL*ASEEGSAFRLGQHR Trigger: TCTATGCTGTCCGAGACGGAAAGCTGAGCCTTCTTCGGAGGCTCAAAGCCTCCCGGCCTCGCCGCAGCGGTGCTCTGGCCTCCCCCACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | GCCTCCAGCCCGCAGAACCAGACTGAGAAGCCACGCCCATTCCACTaGAGACAGCATGAGTGTGCATTGCGGCCCAGCCGGCCCCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSPQNQTEKPRPFH*RQHECALRPSRPRS Trigger: TGACCGGGGCCGGCTGGGCCGCAATGCACACTCATGCTGTCTGCAGTGGAATGGGCGTGGCTTCTCAGTCTGGTTCTGCGGGCTGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | CCACAGTACGGCGGGACTGTGCGATGCCGGCACCCAGTTCATCCATaGGGTCCTCCGCAGCGCTCAGGACTTTGGACTGCTCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQYGGTVRCRHPVHP*GPPQRSGLWTAPPP Trigger: AGGAGGTGGAGCAGTCCAAAGTCCTGAGCGCTGCGGAGGACCGCATGGATGAACTGGGTGCCGGCATCGCACAGTCCCGCCGTACTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | TGCCACAGCTGCACTCTTGATGAGGGCCACAGTACGGCGGGACTGTaGGATGCCGGCACCCAGTTCATCCATGCGGTCCTCCGCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CHSCTLDEGHSTAGL*DAGTQFIHAVLRSA Trigger: AGCGCTGCGGAGGACCGCATGGATGAACTGGGTGCCGGCATCGCACAGTCCCGCCGTACTGTGGCCCTCATCAAGAGTGCAGCTGTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | GGTGGCTGTGGCCTCGGCAAACATCTGGCTCACCCTCTCCCGCTCTaGCACAGCTGCACTCTTGATGAGGGCCACAGTACGGCGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GGCGLGKHLAHPLPL*HSCTLDEGHSTAGL Trigger: CAGTCCCGCCGTACTGTGGCCCTCATCAAGAGTGCAGCTGTGGCAGAGCGGGAGAGGGTGAGCCAGATGTTTGCCGAGGCCACAGCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | CCTCTGGAACCTGACCGAGGTTGTGCCGTGCCTTGCTTAGGCGGCTaGGCTGTTCCTCTTGTCTACGCAGGTCACCCTGGGACCGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLEPDRGCAVPCLGG*AVPLVYAGHPGTGP Trigger: TGGGCCGGTCCCAGGGTGACCTGCGTAGACAAGAGGAACAGCGCAGCCGCCTAAGCAAGGCACGGCACAACCTCGGTCAGGTTCCAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | CTGAGAAGCCACGCCCATTCCACTGCAGACAGCATGAGTGTGCATTaGGGCCCAGCCGGCCCCGGTCATAGGGCTCTTGCGGGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSHAHSTADSMSVH*GPAGPGHRALAGRS Trigger: GCTTCTCCCCGCAAGAGCCCTATGACCGGGGCCGGCTGGGCCGCAATGCACACTCATGCTGTCTGCAGTGGAATGGGCGTGGCTTCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CAA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGCAGCATGAGTGTGCATaGCGGCCCAGCCGGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRQHECA*RPSRPR Trigger: CCGGGGCCGGCTGGGCCGCAATGCACACTCATGCTG...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | CCGAGTTTCTGTAGCCCATCCTCATTGCTGCCCAGCCCCCGCAGCTaGTCCCACTGGCTGGCACAGGCTGAGATGAGGGTGTCTCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PSFCSPSSLLPSPRS*SHWLAQAEMRVSLT Trigger: GGTGAGAGACACCCTCATCTCAGCCTGTGCCAGCCAGTGGGAGCAGCTGCGGGGGCTGGGCAGCAATGAGGATGGGCTACAGAAACTCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CAA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGCCGGTCATAGGGCTCTaGCGGGGAGAAGCCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRPVIGL*RGEALG Trigger: GCCGAGGGCTTCTCCCCGCAAGAGCCCTATGACCGG...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 90 bp | GCCAGGAGCTCCTGGAGAAAGCTGACTGAATCCGCCTCTGGAACCTaGCCGAGGTTGTGCCGTGCCTTGCTTAGGCGGCTGCGCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSSWRKLTESASGT*PRLCRALLRRLRCS Trigger: GGAACAGCGCAGCCGCCTAAGCAAGGCACGGCACAACCTCGGTCAGGTTCCAGAGGCGGATTCAGTCAGCTTTCTCCAGGAGCTCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCGACAGCGTGTGGTTCTaGCGGAGCTGCAGGCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTDSVWF*RSCRPS Trigger: CGACGGCCTGCAGCTCCGCAAGAACCACACGCTGTC...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CAA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGCCGGTCATAGGGCTCTaGCGGGGAGAAGCCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMPVIGL*RGEALG Trigger: GCCGAGGGCTTCTCCCCGCAAGAGCCCTATGACCGG...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 90 bp | TTGCTTAGGCGGCTGCGCTGTTCCTCTTGTCTACGCAGGTCACCCTaGGACCGGCCCAACATTGTGGCCTCTCCCTCTTCGATGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRRLRCSSCLRRSP*DRPNIVASPSSMNP Trigger: GGGGTTCATCGAAGAGGGAGAGGCCACAATGTTGGGCCGGTCCCAGGGTGACCTGCGTAGACAAGAGGAACAGCGCAGCCGCCTAAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
||
| CDS CCA 90 bp | TCCCTGGGGGCCTCACTCTCCAGCAGGCTGGTACTGTCAGGGTCCTaGGACTCCACATCTGCTTCTGAGCCGAGTTTCTGTAGCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGASLSSRLVLSGS*DSTSASEPSFCSPS Trigger: GGATGGGCTACAGAAACTCGGCTCAGAAGCAGATGTGGAGTCCCAGGACCCTGACAGTACCAGCCTGCTGGAGAGTGAGGCCCCCAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021120.6 |
||
| CDS-3UTR CAA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGGGGACCGGCCCAACATaGTGGCCTCTCCCTCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRGTGPT*WPLPLR Trigger: TCGAAGAGGGAGAGGCCACAATGTTGGGCCGGTCCC...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGCGAGGCCGGGAGGCTTaGAGCCTCCGAAGAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMRGREA*SLRRRL Trigger: GAGCCTTCTTCGGAGGCTCAAAGCCTCCCGGCCTCG...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
||
| CDS TCA 90 bp | GGTCACCCTGGGACCGGCCCAACATTGTGGCCTCTCCCTCTTCGATaGACCCCATCACCTCGTTCTGGAAACTCTGAAGGGTGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHPGTGPTLWPLPLR*TPSPRSGNSEGWLW Trigger: CCACAGCCACCCTTCAGAGTTTCCAGAACGAGGTGATGGGGTTCATCGAAGAGGGAGAGGCCACAATGTTGGGCCGGTCCCAGGGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
||
| CDS CCA 90 bp | TCCCTGGGGGCCTCACTCTCCAGCAGGCTGGTACTGTCAGGGTCCTaGGACTCCACATCTTCTGAGCCGAGTTTCTGTAGCCCATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGASLSSRLVLSGS*DSTSSEPSFCSPSS Trigger: TGAGGATGGGCTACAGAAACTCGGCTCAGAAGATGTGGAGTCCCAGGACCCTGACAGTACCAGCCTGCTGGAGAGTGAGGCCCCCAGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106441.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGGCTGCGCTGTTCCTCTaGTCTACGCAGGTCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRAALFL*STQVTL Trigger: CAGGGTGACCTGCGTAGACAAGAGGAACAGCGCAGC...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 90 bp | GCCTCTCCCTCTTCGATGAACCCCATCACCTCGTTCTGGAAACTCTaGAGGGTGGCTGTGGCCTCGGCAAACATCTGGCTCACCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ASPSSMNPITSFWKL*RVAVASANIWLTLS Trigger: GGAGAGGGTGAGCCAGATGTTTGCCGAGGCCACAGCCACCCTTCAGAGTTTCCAGAACGAGGTGATGGGGTTCATCGAAGAGGGAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CAA 90 bp | TCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGGCTGCGCTGTTCCTCTaGTCTACGCAGGTCACCCTG | + |
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Preference number: 5 (lower is better) Translates to: SLRLVPSPSKYGQRRHRMAALFL*STQVTL Trigger: CAGGGTGACCTGCGTAGACAAGAGGAACAGCGCAGC...CATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCACCACCTGGGAGGACTaGGTGAAGCTGAGTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTTTWED*VKLSSL Trigger: CAGGGAACTCAGCTTCACCAAGTCCTCCCAGGTGGT...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGATGACCAAAAGCTGCAGGAACTaGTCCGCGGTGTCGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LRLVPSPSKYGQRRHRMTKSCRN*SAVSLS Trigger: GGACAGCGACACCGCGGACAAGTTCCTGCAGCTTTT...GGTCATCCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS-3UTR CAA 90 bp | GAGTCTCTGAGGCTAGTGCCTTCCCCTAGCAAATATGGGCAACGGCGCCACAGGAAAAGCTGCAGGAACTaGTCCGCGGTGTCGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: ESLRLVPSPSKYGQRRHRKSCRN*SAVSLS Trigger: GGACAGCGACACCGCGGACAAGTTCCTGCAGCTTTT...CCTGTGGCGCCGTTGCCCATATTTGCTAGGGGAAGGCACTAGCCTCAGAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 90 bp | CTCCTCTTCAGCACGGTTATGCACGATTTCTTGAGAGGTCCAATCTaGAGATGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LLFSTVMHDFLRGPI*RWASTLSRKKAGLS Trigger: GCTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCATCTGCAGATTGGACCTCTCAAGAAATCGTGCATAACCGTGCTGAAGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 90 bp | TTCAGCACGGTTATGCACGATTTCTTGAGAGGTCCAATCTGCAGATaGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: FSTVMHDFLRGPICR*ASTLSRKKAGLSLW Trigger: CCACAGGCTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCATCTGCAGATTGGACCTCTCAAGAAATCGTGCATAACCGTGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | AGGGAGCCGATGGTTCCGGAGCCGGAGGTGGTGCGCTaGGCGCGGAGGGCTCGGGCGTGGCGCCCCGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: REPMVPEPEVVR*ARRARAWRPGS Trigger: CGACCCGGGGCGCCACGCCCGAGCCCTCCGCGCCCAGCGCACCACCTCCGGCTCCGGAACCATCGGCTCCCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | GCGTCGCAGCGCACCGGCTCCTCACCCGCGGGCCACTaGTCCGGCGCGCAGGGAGCCGATGGTTCCGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: ASQRTGSSPAGH*SGAQGADGSGA Trigger: GGCTCCGGAACCATCGGCTCCCTGCGCGCCGGAGCAGTGGCCCGCGGGTGAGGAGCCGGTGCGCTGCGACGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | ACCCGCGGGCCACTGCTCCGGCGCGCAGGGAGCCGATaGTTCCGGAGCCGGAGGTGGTGCGCTGGGCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: TRGPLLRRAGSR*FRSRRWCAGRG Trigger: TCCGCGCCCAGCGCACCACCTCCGGCTCCGGAACCATCGGCTCCCTGCGCGCCGGAGCAGTGGCCCGCGGGT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | ACCAGGCGGTGGCCGCGCAGGGCGGGGCTGCGTTCGTaGGGGGCCAGATGCGCGGAGCAGAAGGAGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: TRRWPRRAGLRS*GARCAEQKEAR Trigger: CCTCGCCTCCTTCTGCTCCGCGCATCTGGCCCCCCACGAACGCAGCCCCGCCCTGCGCGGCCACCGCCTGGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | TGGCGCCCCGGGTCGATCCTGAAGCCGGGGCGGACATaGGTCCCGGGACCGAGCCCTGGCGGAGCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: WRPGSILKPGRT*VPGPSPGGAAA Trigger: TGCTGCAGCTCCGCCAGGGCTCGGTCCCGGGACCCATGTCCGCCCCGGCTTCAGGATCGACCCGGGGCGCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | AAAGTGGACAGCGAGCTGGACCTCCGGAACCACCGGTaGCGCCCGCGCTCCGGTGCGGCCAGAGAGCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: KVDSELDLRNHR*RPRSGAARERP Trigger: TGGGCGCTCTCTGGCCGCACCGGAGCGCGGGCGGCACCGGTGGTTCCGGAGGTCCAGCTCGCTGTCCACTTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | GAAGCCGGGGCGGACATGGGTCCCGGGACCGAGCCCTaGCGGAGCTGCAGCAACTCGGACAGCGTGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: EAGADMGPGTEP*RSCSNSDSVWF Trigger: GAACCACACGCTGTCCGAGTTGCTGCAGCTCCGCCAGGGCTCGGTCCCGGGACCCATGTCCGCCCCGGCTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 72 bp | TGCTCCAGCGGCACGAGCTCGTGGCCGCGATGGTCCTaGGTGGCACAGGCCTCGCAAAGGCACACACGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSSGTSSWPRWS*VAQASQRHTRS Trigger: GGAGCGTGTGTGCCTTTGCGAGGCCTGTGCCACTCAGGACCATCGCGGCCACGAGCTCGTGCCGCTGGAGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | GAGCCCTGGCGGAGCTGCAGCAACTCGGACAGCGTGTaGTTCTTGCGGAGCTGCAGGCCGTCGGGGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: EPWRSCSNSDSV*FLRSCRPSGKG Trigger: GCCTTTCCCCGACGGCCTGCAGCTCCGCAAGAACCACACGCTGTCCGAGTTGCTGCAGCTCCGCCAGGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CAA 72 bp | TGCATTGCGGCCCAGCCGGCCCCGGTCATAGGGCTCTaGCGGGGAGAAGCCCTCGGCCATGACTCCCACACT | + |
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Preference number: 6 (lower is better) Translates to: CIAAQPAPVIGL*RGEALGHDSHT Trigger: AGTGTGGGAGTCATGGCCGAGGGCTTCTCCCCGCAAGAGCCCTATGACCGGGGCCGGCTGGGCCGCAATGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CAA 72 bp | GAGGCCAGAGCACCGCTGCGGCGAGGCCGGGAGGCTTaGAGCCTCCGAAGAAGGCTCAGCTTTCCGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: EARAPLRRGREA*SLRRRLSFPSR Trigger: CCGAGACGGAAAGCTGAGCCTTCTTCGGAGGCTCAAAGCCTCCCGGCCTCGCCGCAGCGGTGCTCTGGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 72 bp | AGGCCAGAGCACCGCTGCGGCGAGGCCGGGAGGCTTTaGGCCTCCGAAGAAGGCTCAGCTTTCCGTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: RPEHRCGEAGRL*ASEEGSAFRLG Trigger: TCCGAGACGGAAAGCTGAGCCTTCTTCGGAGGCTCAAAGCCTCCCGGCCTCGCCGCAGCGGTGCTCTGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | GAGCTGCAGGCCGTCGGGGAAAGGCTCCTGACAAAGTaGACAGCGAGCTGGACCTCCGGAACCACCGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ELQAVGERLLTK*TASWTSGTTGA Trigger: GGCACCGGTGGTTCCGGAGGTCCAGCTCGCTGTCCACTTTGTCAGGAGCCTTTCCCCGACGGCCTGCAGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | GGCGGGACTGTGCGATGCCGGCACCCAGTTCATCCATaGGGTCCTCCGCAGCGCTCAGGACTTTGGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: GGTVRCRHPVHP*GPPQRSGLWTA Trigger: AGCAGTCCAAAGTCCTGAGCGCTGCGGAGGACCGCATGGATGAACTGGGTGCCGGCATCGCACAGTCCCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | CACGCCCATTCCACTGCAGACAGCATGAGTGTGCATTaGGGCCCAGCCGGCCCCGGTCATAGGGCTCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: HAHSTADSMSVH*GPAGPGHRALA Trigger: CGCAAGAGCCCTATGACCGGGGCCGGCTGGGCCGCAATGCACACTCATGCTGTCTGCAGTGGAATGGGCGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | CCTGACCGAGGTTGTGCCGTGCCTTGCTTAGGCGGCTaGGCTGTTCCTCTTGTCTACGCAGGTCACCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PDRGCAVPCLGG*AVPLVYAGHPG Trigger: CCCAGGGTGACCTGCGTAGACAAGAGGAACAGCGCAGCCGCCTAAGCAAGGCACGGCACAACCTCGGTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | CGGCTGCGCTGTTCCTCTTGTCTACGCAGGTCACCCTaGGACCGGCCCAACATTGTGGCCTCTCCCTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: RLRCSSCLRRSP*DRPNIVASPSS Trigger: CGAAGAGGGAGAGGCCACAATGTTGGGCCGGTCCCAGGGTGACCTGCGTAGACAAGAGGAACAGCGCAGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 72 bp | TTCTTGCGGAGCTGCAGGCCGTCGGGGAAAGGCTCCTaGCAAAGTGGACAGCGAGCTGGACCTCCGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: FLRSCRPSGKGS*QSGQRAGPPEP Trigger: TGGTTCCGGAGGTCCAGCTCGCTGTCCACTTTGTCAGGAGCCTTTCCCCGACGGCCTGCAGCTCCGCAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | TGCACTCTTGATGAGGGCCACAGTACGGCGGGACTGTaGGATGCCGGCACCCAGTTCATCCATGCGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: CTLDEGHSTAGL*DAGTQFIHAVL Trigger: GAGGACCGCATGGATGAACTGGGTGCCGGCATCGCACAGTCCCGCCGTACTGTGGCCCTCATCAAGAGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | GGCCTCGGCAAACATCTGGCTCACCCTCTCCCGCTCTaGCACAGCTGCACTCTTGATGAGGGCCACAGTACG | + |
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Preference number: 6 (lower is better) Translates to: GLGKHLAHPLPL*HSCTLDEGHST Trigger: CGTACTGTGGCCCTCATCAAGAGTGCAGCTGTGGCAGAGCGGGAGAGGGTGAGCCAGATGTTTGCCGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | CCGCCTCTGGAACCTGACCGAGGTTGTGCCGTGCCTTaGTTAGGCGGCTGCGCTGTTCCTCTTGTCTACGCA | + |
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Preference number: 6 (lower is better) Translates to: PPLEPDRGCAVP*LGGCAVPLVYA Trigger: TGCGTAGACAAGAGGAACAGCGCAGCCGCCTAAGCAAGGCACGGCACAACCTCGGTCAGGTTCCAGAGGCGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | CCGCAGAACCAGACTGAGAAGCCACGCCCATTCCACTaGAGACAGCATGAGTGTGCATTGCGGCCCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: PQNQTEKPRPFH*RQHECALRPSR Trigger: CCGGCTGGGCCGCAATGCACACTCATGCTGTCTGCAGTGGAATGGGCGTGGCTTCTCAGTCTGGTTCTGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS TCA 72 bp | TCCTGGAGAAAGCTGACTGAATCCGCCTCTGGAACCTaGCCGAGGTTGTGCCGTGCCTTGCTTAGGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SWRKLTESASGT*PRLCRALLRRL Trigger: CAGCCGCCTAAGCAAGGCACGGCACAACCTCGGTCAGGTTCCAGAGGCGGATTCAGTCAGCTTTCTCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | CCATCACCTCGTTCTGGAAACTCTGAAGGGTGGCTGTaGCCTCGGCAAACATCTGGCTCACCCTCTCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PSPRSGNSEGWL*PRQTSGSPSPA Trigger: AGCGGGAGAGGGTGAGCCAGATGTTTGCCGAGGCCACAGCCACCCTTCAGAGTTTCCAGAACGAGGTGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | GGAAGTAATCCCTGGGGGCCTCACTCTCCAGCAGGCTaGTACTGTCAGGGTCCTGGGACTCCACATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GSNPWGPHSPAG*YCQGPGTPHLL Trigger: AAGCAGATGTGGAGTCCCAGGACCCTGACAGTACCAGCCTGCTGGAGAGTGAGGCCCCCAGGGATTACTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021120.6 |
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| CDS CCA 72 bp | GGAAGTAATCCCTGGGGGCCTCACTCTCCAGCAGGCTaGTACTGTCAGGGTCCTGGGACTCCACATCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSNPWGPHSPAG*YCQGPGTPHLL Trigger: CAGAAGATGTGGAGTCCCAGGACCCTGACAGTACCAGCCTGCTGGAGAGTGAGGCCCCCAGGGATTACTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106441.8 |
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| CDS CAA 90 bp | CCAATCTGCAGATGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTaGAGCCTGTGGTTGAAGAGCCCGGAAAAATGGCTGTCCAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: PICRWASTLSRKKAG*SLWLKSPEKWLSRR Trigger: TCGCCTGGACAGCCATTTTTCCGGGCTCTTCAACCACAGGCTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCATCTGCAGATTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | GCCTCACTCTCCAGCAGGCTGGTACTGTCAGGGTCCTaGGACTCCACATCTGCTTCTGAGCCGAGTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: ASLSSRLVLSGS*DSTSASEPSFC Trigger: ACAGAAACTCGGCTCAGAAGCAGATGTGGAGTCCCAGGACCCTGACAGTACCAGCCTGCTGGAGAGTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021120.6 |
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| CDS CCA 72 bp | GCCTCACTCTCCAGCAGGCTGGTACTGTCAGGGTCCTaGGACTCCACATCTTCTGAGCCGAGTTTCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ASLSSRLVLSGS*DSTSSEPSFCS Trigger: GCTACAGAAACTCGGCTCAGAAGATGTGGAGTCCCAGGACCCTGACAGTACCAGCCTGCTGGAGAGTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106441.8 |
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| CDS CAA 72 bp | CTGGCACAGGCTGAGATGAGGGTGTCTCTCACCGCTTaGACCACCTGGGAGGACTTGGTGAAGCTGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LAQAEMRVSLTA*TTWEDLVKLSS Trigger: GGAACTCAGCTTCACCAAGTCCTCCCAGGTGGTCAAAGCGGTGAGAGACACCCTCATCTCAGCCTGTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CCA 72 bp | TCCACACTCTCCAGGAAGAAGGCAGGCTTGAGCCTGTaGTTGAAGAGCCCGGAAAAATGGCTGTCCAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: STLSRKKAGLSL*LKSPEKWLSRR Trigger: TCGCCTGGACAGCCATTTTTCCGGGCTCTTCAACCACAGGCTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CAA 72 bp | ACACTCTCCAGGAAGAAGGCAGGCTTGAGCCTGTGGTaGAAGAGCCCGGAAAAATGGCTGTCCAGGCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: TLSRKKAGLSLW*KSPEKWLSRRL Trigger: GAGTCGCCTGGACAGCCATTTTTCCGGGCTCTTCAACCACAGGCTCAAGCCTGCCTTCTTCCTGGAGAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS CAA 72 bp | AGATGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTaGAGCCTGTGGTTGAAGAGCCCGGAAAAATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RWASTLSRKKAG*SLWLKSPEKWL Trigger: CAGCCATTTTTCCGGGCTCTTCAACCACAGGCTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | CACAGTACTCTCTTGACACCTTTAGTTCCAAAAAGCTaGAGGAACTTGTCCGCGGTGTCGCTGTCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: HSTLLTPLVPKS*RNLSAVSLSRS Trigger: GGACCTGGACAGCGACACCGCGGACAAGTTCCTGCAGCTTTTTGGAACTAAAGGTGTCAAGAGAGTACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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| CDS GCA 72 bp | AGCACGGTTATGCACGATTTCTTGAGAGGTCCAATCTaGAGATGGGCGTCCACACTCTCCAGGAAGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: STVMHDFLRGPI*RWASTLSRKKA Trigger: TGCCTTCTTCCTGGAGAGTGTGGACGCCCATCTGCAGATTGGACCTCTCAAGAAATCGTGCATAACCGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021120.6 ENSMUST00000106441.8 |
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