Pregenerated sensors for TRIM44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027189Ensembl transcript IDs: ENSMUST00000102573.8, ENSMUST00000144110.2, ENSMUST00000152929.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCCCATGACCTACCACAGAGAACAAGAAGCACACAGTCAGAATaGATACAACCCCTGGTCCCTTGGGAACATGTGTGCCTGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SSHDLPQRTRSTQSE*IQPLVPWEHVCLLW Trigger: CCACAGCAGGCACACATGTTCCCAAGGGACCAGGGGTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTAGGTCATGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CCA 90 bp | TACCACAGAGAACAAGAAGCACACAGTCAGAATGCATACAACCCCTaGTCCCTTGGGAACATGTGTGCCTGCTGTGGATCTGGGGACATT | + |
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Preference number: 1 (lower is better) Translates to: YHREQEAHSQNAYNP*SLGNMCACCGSGDI Trigger: AATGTCCCCAGATCCACAGCAGGCACACATGTTCCCAAGGGACCAGGGGTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR TCA 90 bp | CTGGACATGCTACATGAAGAGAAAACTGGGCTGTGTGAGGTGAGCTaGCGGCCTGCTGCAGGGGAAGGGAGGATTCCAATTATAGTAAAT | + |
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Preference number: 1 (lower is better) Translates to: LDMLHEEKTGLCEVS*RPAAGEGRIPIIVN Trigger: ATTTACTATAATTGGAATCCTCCCTTCCCCTGCAGCAGGCCGTCAGCTCACCTCACACAGCCCAGTTTTCTCTTCATGTAGCATGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR TCA 90 bp | ACTTACTACTTCCTGGATCCTGAAAAGCATGGTTGTAAGAGACTGTaGTCTGGGAGTGTGGGAAGGCCAGGAAACCCAGCTCTGGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: TYYFLDPEKHGCKRL*SGSVGRPGNPALEH Trigger: ATGCTCCAGAGCTGGGTTTCCTGGCCTTCCCACACTCCCAGATCACAGTCTCTTACAACCATGCTTTTCAGGATCCAGGAAGTAGTAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR GCA 90 bp | AGTCAGAATGCATACAACCCCTGGTCCCTTGGGAACATGTGTGCCTaGTGTGGATCTGGGGACATTTCCAGTAGAAGAAGTTTGTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: SQNAYNPWSLGNMCA*CGSGDISSRRSLLP Trigger: AGGCAACAAACTTCTTCTACTGGAAATGTCCCCAGATCCACAGCAGGCACACATGTTCCCAAGGGACCAGGGGTTGTATGCATTCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR TCA 90 bp | TTAGATCTCACACTCCGCTCTGCCCCAATATCCTTGTATGTGTGGTaGGTTTCAGTAATCCTAGCCTACAGCAGAGTGGCTTGGCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LDLTLRSAPISLYVW*VSVILAYSRVAWQF Trigger: AAACTGCCAAGCCACTCTGCTGTAGGCTAGGATTACTGAAACTCACCACACATACAAGGATATTGGGGCAGAGCGGAGTGTGAGATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR GCA 90 bp | AAGCCACATCAAGCCCAGCATGGACTCTGGCTATTTTCTCAACAGTaGACTCCAAGTGTCTTCATTTATTTTCCCGTTCCTGCTCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: KPHQAQHGLWLFSQQ*TPSVFIYFPVPALV Trigger: GACCAGAGCAGGAACGGGAAAATAAATGAAGACACTTGGAGTGCACTGTTGAGAAAATAGCCAGAGTCCATGCTGGGCTTGATGTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR TCA 90 bp | CAGCAAGACATTTTCTCTGTGGGGAGAGAGGACTTCTTAGACCACTaGCTACTACAAGGTTATAAATTCTGCAGCTCTAAACTCGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: QQDIFSVGREDFLDH*LLQGYKFCSSKLGP Trigger: GGGCCCGAGTTTAGAGCTGCAGAATTTATAACCTTGTAGTAGTCAGTGGTCTAAGAAGTCCTCTCTCCCCACAGAGAAAATGTCTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CCA 90 bp | ACTGATGTCTCAAGAAGATGTGGTGCTTGTGAGCTTGCAGTTAGTTaGGTATCTCCCAGCACACTTACTACTTCCTGGATCCTGAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: TDVSRRCGACELAVS*VSPSTLTTSWILKS Trigger: GCTTTTCAGGATCCAGGAAGTAGTAAGTGTGCTGGGAGATACCCAACTAACTGCAAGCTCACAAGCACCACATCTTCTTGAGACATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CCA 90 bp | AGTTTCAGTAATCCTAGCCTACAGCAGAGTGGCTTGGCAGTTTCCTaGCCTCAAAGGGATAAATCATTTTCTAGCATGCACAGGGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: SFSNPSLQQSGLAVS*PQRDKSFSSMHRAE Trigger: TTCAGCCCTGTGCATGCTAGAAAATGATTTATCCCTTTGAGGCCAGGAAACTGCCAAGCCACTCTGCTGTAGGCTAGGATTACTGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR TCA 90 bp | GCAACCCCAAGGCTGCCTGAATCCAGTTCAGACAAAATCTCAAAGTaGACATGGAAATACCACACAAGCAGAGGAGATAGAATCACTGTC | + |
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Preference number: 1 (lower is better) Translates to: ATPRLPESSSDKISK*TWKYHTSRGDRITV Trigger: GACAGTGATTCTATCTCCTCTGCTTGTGTGGTATTTCCATGTTCACTTTGAGATTTTGTCTGAACTGGATTCAGGCAGCCTTGGGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR TCA 90 bp | AGATTGAGTGTTCCCTTGTTTAGTGTAAAGAGTGGAAGGGGAAGATaGCTAAGGAGGGAATGTGACTGTGCACACAAAAACAGGCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: RLSVPLFSVKSGRGR*LRRECDCAHKNRQK Trigger: CTTCTGCCTGTTTTTGTGTGCACAGTCACATTCCCTCCTTAGTCATCTTCCCCTTCCACTCTTTACACTAAACAAGGGAACACTCAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CCA 90 bp | ACTAAGGCCATCTTGATGTCTTTGAAAAAGAATTCCGAGTGTGAATaGGCATACTACACTGGGGGAACTGAAAGCCTTTCTCTCTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: TKAILMSLKKNSECE*AYYTGGTESLSLSQ Trigger: TTGAGAGAGAGAAAGGCTTTCAGTTCCCCCAGTGTAGTATGCCCATTCACACTCGGAATTCTTTTTCAAAGACATCAAGATGGCCTTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CCA 90 bp | CCAACTTATTTTAGAGACATTCATTACCTGTATCACTTGATGATTTaGGCAAACCCTGCTGTCCACAGTCTGTCAGGACACATACAACTC | + |
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Preference number: 1 (lower is better) Translates to: PTYFRDIHYLYHLMI*ANPAVHSLSGHIQL Trigger: GAGTTGTATGTGTCCTGACAGACTGTGGACAGCAGGGTTTGCCCAAATCATCAAGTGATACAGGTAATGAATGTCTCTAAAATAAGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CCA 90 bp | TATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGACTCTaGCTATTTTCTCAACAGTGCACTCCAAGTGTCTTCATTTATTTT | + |
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Preference number: 1 (lower is better) Translates to: YMIGPLKPHQAQHGL*LFSQQCTPSVFIYF Trigger: AAAATAAATGAAGACACTTGGAGTGCACTGTTGAGAAAATAGCCAGAGTCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR GCA 90 bp | AACAATGACATAAATAGGACTCCTACAATAAGTCTATGCTGTTTCTaGCTCAGAACTATCCTGTACATACACATGTTAGCTGCCCCTAAA | + |
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Preference number: 1 (lower is better) Translates to: NNDINRTPTISLCCF*LRTILYIHMLAAPK Trigger: TTTAGGGGCAGCTAACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTAGGAGTCCTATTTATGTCATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CCA 90 bp | TCAGCACTCAGAAACTTAACATTCAGAAGGTATCCAGGACTTGTTTaGAGGACCCAACTTATTTTAGAGACATTCATTACCTGTATCACT | + |
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Preference number: 1 (lower is better) Translates to: SALRNLTFRRYPGLV*RTQLILETFITCIT Trigger: AGTGATACAGGTAATGAATGTCTCTAAAATAAGTTGGGTCCTCCAAACAAGTCCTGGATACCTTCTGAATGTTAAGTTTCTGAGTGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGTGTGGGAAGGCCAGGAAACCCAGCTCTGGAGCATGCCTGGACATGCTACATGTGTGCCTGCTGTaGATCTGGGGACATTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: WECGKARKPSSGACLDMLHVCLL*IWGHFQ Trigger: CTGGAAATGTCCCCAGATCCACAGCAGGCACACATG...TAGCATGTCCAGGCATGCTCCAGAGCTGGGTTTCCTGGCCTTCCCACACTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACACTCCAGGAAGGGAGTCCAGGGAACATGTGTGCCTaGTGTGGATCTGGGGACATT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTLQEGSPGNMCA*CGSGDI Trigger: AATGTCCCCAGATCCACAGCAGGCACACATGTTCCC...TGGACTCCCTTCCTGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGTGTGATCTGGGAGTGTaGGAAGGCCAGGAAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: HVIRHGGRGLGCRHLGLECDLGV*EGQETQ Trigger: CTGGGTTTCCTGGCCTTCCCACACTCCCAGATCACA...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR TCA 90 bp | GAGACTGTGATCTGGGAGTGTGGGAAGGCCAGGAAACCCAGCTCTGGAGCATGCGCAGGTAAGGAAAACTaGTATCCTTTCGAGATGTTC | + |
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Preference number: 2 (lower is better) Translates to: ETVIWECGKARKPSSGACAGKEN*YPFEMF Trigger: GAACATCTCGAAAGGATATCAGTTTTCCTTACCTGC...GCATGCTCCAGAGCTGGGTTTCCTGGCCTTCCCACACTCCCAGATCACAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR GCA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGGAGCAGGGAGTGCTGTaGTCAAAACTGGTTCCATTG | + |
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Preference number: 2 (lower is better) Translates to: HVIRHGGRGLGCRHLGLEEQGVL*SKLVPL Trigger: CAATGGAACCAGTTTTGAGCACAGCACTCCCTGCTC...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGGCTCTGGAGCATGCCTaGACATGCTACATGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HVIRHGGRGLGCRHLGLEALEHA*TCYMKR Trigger: TCTCTTCATGTAGCATGTCCAGGCATGCTCCAGAGC...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCATGACCTACCACAGAGAACAAGAAGCACACAGTCAGAATGCATACAACCCTTGGGAACATGTGTaGCTGCTGTGGATCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LPMTYHREQEAHSQNAYNPWEHV*LLWIWG Trigger: TCCCCAGATCCACAGCAGGCACACATGTTCCCAAGG...GTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTAGGTCATGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 90 bp | AGGGAATGTGACTGTGCACACAAAAACAGGCAGAAGACAATGGATTaGTTGGTTCTACCCACTCACGCGCTGTGGCCTGTCACTGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: RECDCAHKNRQKTMD*LVLPTHALWPVTVK Trigger: CTTTACAGTGACAGGCCACAGCGCGTGAGTGGGTAGAACCAACAAATCCATTGTCTTCTGCCTGTTTTTGTGTGCACAGTCACATTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGACAAGTGGGTTATTCTaGAAAGCCAGCAGTCACACT | + |
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Preference number: 2 (lower is better) Translates to: HVIRHGGRGLGCRHLGLETSGLF*KASSHT Trigger: AGTGTGACTGCTGGCTTTCCAGAATAACCCACTTGT...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 90 bp | TGTGCCTGCTGTGGATCTGGGGACATTTCCAGTAGAAGAAGTTTGTaGCCTGGCAGCTTTCACAGATATCAGAAGCCATTACATACACGC | + |
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Preference number: 2 (lower is better) Translates to: CACCGSGDISSRRSL*PGSFHRYQKPLHTR Trigger: GCGTGTATGTAATGGCTTCTGATATCTGTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGAAATGTCCCCAGATCCACAGCAGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 90 bp | GAATGTGACTGTGCACACAAAAACAGGCAGAAGACAATGGATTTGTaGGTTCTACCCACTCACGCGCTGTGGCCTGTCACTGTAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: ECDCAHKNRQKTMDL*VLPTHALWPVTVKT Trigger: AGTCTTTACAGTGACAGGCCACAGCGCGTGAGTGGGTAGAACCAACAAATCCATTGTCTTCTGCCTGTTTTTGTGTGCACAGTCACATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAATATACATGCCAGCCTTTTATGTTGTGACAGGCCTGTTAATCCACACAGCAGCACACAGTCAGAATaGATACAACCCCTGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: ANIHASLLCCDRPVNPHSSTQSE*IQPLVP Trigger: AGGGACCAGGGGTTGTATGCATTCTGACTGTGTGCT...GCTGTGTGGATTAACAGGCCTGTCACAACATAAAAGGCTGGCATGTATATTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGAAGGAACTTAGGGATCTaGGCTAGGGGCTGCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGRNLGI*ARGCCA Trigger: AGCACAGCAGCCCCTAGCCCAGATCCCTAAGTTCCT...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGTTTAAAGAAATAGCATaGTTGGGTGGAGAGGCAATG | + |
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Preference number: 2 (lower is better) Translates to: HVIRHGGRGLGCRHLGLEFKEIA*LGGEAM Trigger: CATTGCCTCTCCACCCAATCATGCTATTTCTTTAAA...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 90 bp | ATGTGTGCCTGCTGTGGATCTGGGGACATTTCCAGTAGAAGAAGTTaGTTGCCTGGCAGCTTTCACAGATATCAGAAGCCATTACATACA | + |
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Preference number: 2 (lower is better) Translates to: MCACCGSGDISSRRS*LPGSFHRYQKPLHT Trigger: TGTATGTAATGGCTTCTGATATCTGTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGAAATGTCCCCAGATCCACAGCAGGCACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGGACAAAATCTCAAAGTaGACATGGAAATACCACACA | + |
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Preference number: 2 (lower is better) Translates to: HVIRHGGRGLGCRHLGLEDKISK*TWKYHT Trigger: TGTGTGGTATTTCCATGTTCACTTTGAGATTTTGTC...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGTCCTGGAAGGAACAATaGATACTTACAACATCTACT | + |
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Preference number: 2 (lower is better) Translates to: HVIRHGGRGLGCRHLGLESWKEQ*ILTTST Trigger: AGTAGATGTTGTAAGTATTCATTGTTCCTTCCAGGA...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGAATCTGGGCTAGGGGCTaGTGTGCTGTGTTTAATGCT | + |
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Preference number: 2 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGIWARG*CAVFNA Trigger: AGCATTAAACACAGCACAGCAGCCCCTAGCCCAGAT...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 90 bp | TGGAAAGAAAAACTGATGTCTCAAGAAGATGTGGTGCTTGTGAGCTaGCAGTTAGTTGGGTATCTCCCAGCACACTTACTACTTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: WKEKLMSQEDVVLVS*QLVGYLPAHLLLPG Trigger: TCCAGGAAGTAGTAAGTGTGCTGGGAGATACCCAACTAACTGCAAGCTCACAAGCACCACATCTTCTTGAGACATCAGTTTTTCTTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGATGTACTACTCCAAGGTaGACTCCTTGGATCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGCTTPR*TPWIWK Trigger: CTTCCAGATCCAAGGAGTCCACCTTGGAGTAGTACA...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGATCCTTGTATGTGTGGTaGGTTTCAGTAATCCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGSLYVW*VSVILA Trigger: GGCTAGGATTACTGAAACTCACCACACATACAAGGA...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCCAACCCTATTTTAACCCAGTTGCCCTAACACTTTTCACAGAGGCAGAAGTGATAGTGTTGACTTaGACAATATTCCAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: FLQPYFNPVALTLFTEAEVIVLT*TIFQGL Trigger: CAGCCCCTGGAATATTGTGCAAGTCAACACTATCAC...TTCTGCCTCTGTGAAAAGTGTTAGGGCAACTGGGTTAAAATAGGGTTGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR GCA 90 bp | TACAATAAGTCTATGCTGTTTCTGCCTCAGAACTATCCTGTACATACACATGTTGGATTCCCCTCACAGTaGACTGACCACCATAGACTA | + |
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Preference number: 2 (lower is better) Translates to: YNKSMLFLPQNYPVHTHVGFPSQ*TDHHRL Trigger: TAGTCTATGGTGGTCAGTGCACTGTGAGGGGAATCC...AACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGACCATTTCCACAGCACTaGATTATGAAACTTAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGPFPQH*IMKLKS Trigger: GGACTTAAGTTTCATAATTCAGTGCTGTGGAAATGG...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGACTACTAGCCACCAGCTaGGGAAAGTATACATATTTT | + |
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Preference number: 2 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGLLATS*GKYTYF Trigger: AAAATATGTATACTTTCCCCAGCTGGTGGCTAGTAG...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 90 bp | CTCAGCACTCAGAAACTTAACATTCAGAAGGTATCCAGGACTTGTTaGGAGGACCCAACTTATTTTAGAGACATTCATTACCTGTATCAC | + |
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Preference number: 2 (lower is better) Translates to: LSTQKLNIQKVSRTC*EDPTYFRDIHYLYH Trigger: GTGATACAGGTAATGAATGTCTCTAAAATAAGTTGGGTCCTCCAAACAAGTCCTGGATACCTTCTGAATGTTAAGTTTCTGAGTGCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGAAGGCAATCTGAATTCTaGAACACTGATTTCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGRQSEF*NTDFNL Trigger: AAGGTTGAAATCAGTGTTTCAGAATTCAGATTGCCT...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR-3UTR GCA 90 bp | AATCCAGCTCCTGGAAGGAACAATGAATACTTACAACATCTACTAGAGCAGAGTCCACTTGGCCACATTTaGTTTAAGCTTCAGTACAAA | + |
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Preference number: 2 (lower is better) Translates to: NPAPGRNNEYLQHLLEQSPLGHI*FKLQYK Trigger: TTTGTACTGAAGCTTAAAGCAAATGTGGCCAAGTGG...ACTCTGCTCTAGTAGATGTTGTAAGTATTCATTGTTCCTTCCAGGAGCTGGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 90 bp | TGTGATAGTTTACACTCTTTCTACAGTGGCCCTTCTTTTAAAATTTaGGCAGAACAGGATATCACTGGAGGTTGTCAACTCAAGATGTAT | + |
|
Preference number: 2 (lower is better) Translates to: CDSLHSFYSGPSFKI*AEQDITGGCQLKMY Trigger: ATACATCTTGAGTTGACAACCTCCAGTGATATCCTGTTCTGCCAAAATTTTAAAAGAAGGGCCACTGTAGAAAGAGTGTAAACTATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CAA 90 bp | AATGAATACTTACAACATCTACTAGAGCAGAGTACTAAGGCCATCTaGATGTCTTTGAAAAAGAATTCCGAGTGTGAATGGGCATACTAC | + |
|
Preference number: 2 (lower is better) Translates to: NEYLQHLLEQSTKAI*MSLKKNSECEWAYY Trigger: GTAGTATGCCCATTCACACTCGGAATTCTTTTTCAAAGACATCAAGATGGCCTTAGTACTCTGCTCTAGTAGATGTTGTAAGTATTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR TCA 90 bp | TACAATAAGTCTATGCTGTTTCTGCCTCAGAACTATCCTGTACATACACATGTTGTCCACTTACAAATATaGGTTTCCTTCCAAGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YNKSMLFLPQNYPVHTHVVHLQI*VSFQVS Trigger: GGAAACTTGGAAGGAAACTCATATTTGTAAGTGGAC...AACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAAGCTTCCAAACTGTCAAGTCTTTTCAATCTTGTGATAGTTTACACTCTTTCAGTCTATGCTGTTTCTaGCTCAGAACTATCCTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: TSFQTVKSFQSCDSLHSFSLCCF*LRTILY Trigger: GTACAGGATAGTTCTGAGGCAGAAACAGCATAGACT...GAAAGAGTGTAAACTATCACAAGATTGAAAAGACTTGACAGTTTGGAAGCTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR TCA 72 bp | ACATGCTACATGAAGAGAAAACTGGGCTGTGTGAGGTaGGCTGACGGCCTGCTGCAGGGGAAGGGAGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: TCYMKRKLGCVR*ADGLLQGKGGF Trigger: GAATCCTCCCTTCCCCTGCAGCAGGCCGTCAGCTCACCTCACACAGCCCAGTTTTCTCTTCATGTAGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | GAGTGTGGGAAGGCCAGGAAACCCAGCTCTGGAGCATaGCTGGACATGCTACATGAAGAGAAAACTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ECGKARKPSSGA*LDMLHEEKTGL Trigger: CAGCCCAGTTTTCTCTTCATGTAGCATGTCCAGGCATGCTCCAGAGCTGGGTTTCCTGGCCTTCCCACACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | GTGGGAAGGCCAGGAAACCCAGCTCTGGAGCATGCCTaGACATGCTACATGAAGAGAAAACTGGGCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VGRPGNPALEHA*TCYMKRKLGCV Trigger: CACACAGCCCAGTTTTCTCTTCATGTAGCATGTCCAGGCATGCTCCAGAGCTGGGTTTCCTGGCCTTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR TCA 72 bp | CTACATGAAGAGAAAACTGGGCTGTGTGAGGTGAGCTaGCGGCCTGCTGCAGGGGAAGGGAGGATTCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: LHEEKTGLCEVS*RPAAGEGRIPI Trigger: AATTGGAATCCTCCCTTCCCCTGCAGCAGGCCGTCAGCTCACCTCACACAGCCCAGTTTTCTCTTCATGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | AGCACACAGTCAGAATGCATACAACCCCTGGTCCCTTaGGAACATGTGTGCCTGCTGTGGATCTGGGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: STQSECIQPLVP*EHVCLLWIWGH Trigger: ATGTCCCCAGATCCACAGCAGGCACACATGTTCCCAAGGGACCAGGGGTTGTATGCATTCTGACTGTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCCTCCAAGTTGATCAAAAGGGCTCTTCCCATGACCTACCACAGAGAACAACAACCCCTGGTCCCTaGGGAACATGTGTGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RALQVDQKGSSHDLPQRTTTPGP*GTCVPA Trigger: AGCAGGCACACATGTTCCCAAGGGACCAGGGGTTGT...TGTTCTCTGTGGTAGGTCATGGGAAGAGCCCTTTTGATCAACTTGGAGGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGCTACAGCAGAGTGGCTaGGCAGTTTCCTGGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HVIRHGGRGLGCRHLGLELQQSG*AVSWPQ Trigger: TTGAGGCCAGGAAACTGCCAAGCCACTCTGCTGTAG...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR TCA 72 bp | CCAAGGTGGACTCCTTGGATCTGGAAGTCTAGACCTTaGTCAACAGCAACCCCAAGGCTGCCTGAATCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PRWTPWIWKSRP*STATPRLPESS Trigger: ACTGGATTCAGGCAGCCTTGGGGTTGCTGTTGATCAAGGTCTAGACTTCCAGATCCAAGGAGTCCACCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR TCA 72 bp | TTCCTGGATCCTGAAAAGCATGGTTGTAAGAGACTGTaGTCTGGGAGTGTGGGAAGGCCAGGAAACCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLDPEKHGCKRL*SGSVGRPGNPA Trigger: AGCTGGGTTTCCTGGCCTTCCCACACTCCCAGATCACAGTCTCTTACAACCATGCTTTTCAGGATCCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | GACCTACCACAGAGAACAAGAAGCACACAGTCAGAATaGATACAACCCCTGGTCCCTTGGGAACATGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: DLPQRTRSTQSE*IQPLVPWEHVC Trigger: GCACACATGTTCCCAAGGGACCAGGGGTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | CCATGTCCCATGTTATTAGACATGGTGGAAGAGGGCTaGGTTGTCGTCACCTTGGCTTGGAGCTGTAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PCPMLLDMVEEG*VVVTLAWSCKS Trigger: ACTCTTACAGCTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATGGGACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | GGTCCCCTAAAGCCACATCAAGCCCAGCATGGACTCTaGCTATTTTCTCAACAGTGCACTCCAAGTGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GPLKPHQAQHGL*LFSQQCTPSVF Trigger: GAAGACACTTGGAGTGCACTGTTGAGAAAATAGCCAGAGTCCATGCTGGGCTTGATGTGGCTTTAGGGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | CACTTTTCACAGAGGCAGAACTGGACTATGACAGACTaGCTATTGAGTCAGTTTGGCCCCACTTGGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: HFSQRQNWTMTD*LLSQFGPTWPH Trigger: ATGTGGCCAAGTGGGGCCAAACTGACTCAATAGGCAGTCTGTCATAGTCCAGTTCTGCCTCTGTGAAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCCTCCAAGTTGATCAAAAGGGCTCTTCCCATGACCTACCACAGAGAACATCCAGTAGAAGAAGTTaGTTGCCTGGCAGCTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RALQVDQKGSSHDLPQRTSSRRS*LPGSFH Trigger: GTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGA...TGTTCTCTGTGGTAGGTCATGGGAAGAGCCCTTTTGATCAACTTGGAGGGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACTCCAGGAAGGGAGTCCAGGCCTTTATTTTCCTTaGTGGGGACTGTACCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTHTLQEGSPGLYFP*WGLYQK Trigger: TTTTTGGTACAGTCCCCACAAAGGAAAATAAAGGCC...TGGACTCCCTTCCTGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | GCTGCCACTAGGAACTTAGGGATCTGGGCTAGGGGCTaGTGTGCTGTGTTTAATGCTTTTCTGGTTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: AATRNLGIWARG*CAVFNAFLVKV Trigger: AACTTTAACCAGAAAAGCATTAAACACAGCACAGCAGCCCCTAGCCCAGATCCCTAAGTTCCTAGTGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAATATACATGCCAGCCTTTTATGTTGTGACAGGCCTGTTAATCCACACAGCATGACAGACTGCCTATaGAGTCAGTTTGGCCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ANIHASLLCCDRPVNPHSMTDCL*SQFGPT Trigger: AGTGGGGCCAAACTGACTCAATAGGCAGTCTGTCAT...GCTGTGTGGATTAACAGGCCTGTCACAACATAAAAGGCTGGCATGTATATTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGAGAAGAGCCCTCCAAGTaGATCAAAAGGGCTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGEEPSK*IKRALP Trigger: GGGAAGAGCCCTTTTGATCAACTTGGAGGGCTCTTC...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | TCAAGAAGATGTGGTGCTTGTGAGCTTGCAGTTAGTTaGGTATCTCCCAGCACACTTACTACTTCCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: SRRCGACELAVS*VSPSTLTTSWI Trigger: GATCCAGGAAGTAGTAAGTGTGCTGGGAGATACCCAACTAACTGCAAGCTCACAAGCACCACATCTTCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | AATCCTAGCCTACAGCAGAGTGGCTTGGCAGTTTCCTaGCCTCAAAGGGATAAATCATTTTCTAGCATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NPSLQQSGLAVS*PQRDKSFSSMH Trigger: GTGCATGCTAGAAAATGATTTATCCCTTTGAGGCCAGGAAACTGCCAAGCCACTCTGCTGTAGGCTAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | TGGCTTGGAGCTGTAAGAGTTGACATCTACCACAAGTaGGTTATTCTGGAAAGCCAGCAGTCACACTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: WLGAVRVDIYHK*VILESQQSHSN Trigger: ATTGGAGTGTGACTGCTGGCTTTCCAGAATAACCCACTTGTGGTAGATGTCAACTCTTACAGCTCCAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAATATACATGCCAGCCTTTTATGTTGTGACAGGCCTGTTAATCCACACAGCAGTGATAGTGTTGACTaGCACAATATTCCAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ANIHASLLCCDRPVNPHSSDSVD*HNIPGA Trigger: AGCCCCTGGAATATTGTGCAAGTCAACACTATCACT...GCTGTGTGGATTAACAGGCCTGTCACAACATAAAAGGCTGGCATGTATATTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | ATTCCAATTATAGTAAATAGAGGAATGTTTGCTAGCTaGCAGGGAGGGACAAGGATTCCCCTCACAGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IPIIVNRGMFAS*QGGTRIPLTVH Trigger: GTGCACTGTGAGGGGAATCCTTGTCCCTCCCTGGCAGCTAGCAAACATTCCTCTATTTACTATAATTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | TCATTACCTGTATCACTTGATGATTTGGGCAAACCCTaGTGTCCACAGTCTGTCAGGACACATACAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLPVSLDDLGKP*CPQSVRTHTTL Trigger: CAGAGTTGTATGTGTCCTGACAGACTGTGGACAGCAGGGTTTGCCCAAATCATCAAGTGATACAGGTAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | CAAGCCCAGCATGGACTCTGGCTATTTTCTCAACAGTaGACTCCAAGTGTCTTCATTTATTTTCCCGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QAQHGLWLFSQQ*TPSVFIYFPVP Trigger: AGGAACGGGAAAATAAATGAAGACACTTGGAGTGCACTGTTGAGAAAATAGCCAGAGTCCATGCTGGGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | CTCCAAGTGTCTTCATTTATTTTCCCGTTCCTGCTCTaGTCCTTGTTAGTGTTTCTGCTCAGCCTCAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LQVSSFIFPFLL*SLLVFLLSLKQ Trigger: CTGTTTGAGGCTGAGCAGAAACACTAACAAGGACCAGAGCAGGAACGGGAAAATAAATGAAGACACTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR TCA 72 bp | AACTGGTTCCATTGTTTGTTAGCAACTACAGACAAGTaGCTTGTCCTCTGCACATCTACAGAGGCTCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: NWFHCLLATTDK*LVLCTSTEAHC Trigger: GCAATGAGCCTCTGTAGATGTGCAGAGGACAAGTCACTTGTCTGTAGTTGCTAACAAACAATGGAACCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | GTTAGTTGGGTATCTCCCAGCACACTTACTACTTCCTaGATCCTGAAAAGCATGGTTGTAAGAGACTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VSWVSPSTLTTS*ILKSMVVRDCD Trigger: ATCACAGTCTCTTACAACCATGCTTTTCAGGATCCAGGAAGTAGTAAGTGTGCTGGGAGATACCCAACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | TTTAGAGACATTCATTACCTGTATCACTTGATGATTTaGGCAAACCCTGCTGTCCACAGTCTGTCAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: FRDIHYLYHLMI*ANPAVHSLSGH Trigger: GTGTCCTGACAGACTGTGGACAGCAGGGTTTGCCCAAATCATCAAGTGATACAGGTAATGAATGTCTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCCAGCTCCTGGAAGGAACAATGAATACTTACAACATCTACTAGAGCAGAGTGAAGGTATCCAGGACTaGTTTGGAGGACCCAACTTA | + |
|
Preference number: 3 (lower is better) Translates to: NPAPGRNNEYLQHLLEQSEGIQD*FGGPNL Trigger: TAAGTTGGGTCCTCCAAACAAGTCCTGGATACCTTC...ACTCTGCTCTAGTAGATGTTGTAAGTATTCATTGTTCCTTCCAGGAGCTGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | ATCTTGATGTCTTTGAAAAAGAATTCCGAGTGTGAATaGGCATACTACACTGGGGGAACTGAAAGCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ILMSLKKNSECE*AYYTGGTESLS Trigger: AGAAAGGCTTTCAGTTCCCCCAGTGTAGTATGCCCATTCACACTCGGAATTCTTTTTCAAAGACATCAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CCA 72 bp | TTTCCAAATGCACAGGGGCGCCAAGTCCGAACATCCTaGGATAGCAGTAAATCTCTCTTACAAAATAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: FPNAQGRQVRTS*DSSKSLLQNNL Trigger: TAAATTATTTTGTAAGAGAGATTTACTGCTATCCCAGGATGTTCGGACTTGGCGCCCCTGTGCATTTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATAAAGTATATATGATTGGTCCCCTAAAGCCACATCAAGCCCAGCATGGAGGATATCACTGGAGGTaGTCAACTCAAGATGTATTA | + |
|
Preference number: 3 (lower is better) Translates to: FHKVYMIGPLKPHQAQHGGYHWR*STQDVL Trigger: TAATACATCTTGAGTTGACAACCTCCAGTGATATCC...TCCATGCTGGGCTTGATGTGGCTTTAGGGGACCAATCATATATACTTTATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR TCA 72 bp | ATTTTCTCTGTGGGGAGAGAGGACTTCTTAGACCACTaGCTACTACAAGGTTATAAATTCTGCAGCTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IFSVGREDFLDH*LLQGYKFCSSK Trigger: TTTAGAGCTGCAGAATTTATAACCTTGTAGTAGTCAGTGGTCTAAGAAGTCCTCTCTCCCCACAGAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | GAAAGTATACATATTTTTAGATCTCACACTCCGCTCTaGCCCAATATCCTTGTATGTGTGGTGAGTTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ESIHIFRSHTPL*PNILVCVVSFS Trigger: ACTGAAACTCACCACACATACAAGGATATTGGGGCAGAGCGGAGTGTGAGATCTAAAAATATGTATACTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAATAAGTCTATGCTGTTTCTGCCTCAGAACTATCCTGTACATACACATGTTGGGTTTGTTTTCTGTTaGCAGGTAAGGAAAACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YNKSMLFLPQNYPVHTHVGFVFC*QVRKTD Trigger: ATCAGTTTTCCTTACCTGCAAACAGAAAACAAACCC...AACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR GCA 72 bp | ATAAATAGGACTCCTACAATAAGTCTATGCTGTTTCTaGCTCAGAACTATCCTGTACATACACATGTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: INRTPTISLCCF*LRTILYIHMLA Trigger: AGCTAACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTAGGAGTCCTATTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTGTGGGAAGGCCAGGAAACCCAGCTCTGGAGCATGCCTGGACATGCTATGGATATCCACTAAATaGAGGGCCTTCTGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WECGKARKPSSGACLDMLWISTK*RAFCSS Trigger: TGAGGAGCAGAAGGCCCTTCATTTAGTGGATATCCA...TAGCATGTCCAGGCATGCTCCAGAGCTGGGTTTCCTGGCCTTCCCACACTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| CDS-3UTR GCA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGTCCGCCTCGCTCTCCTaGTCATCCTCCATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVIRHGGRGLGCRHLGLESASLS*SSSISS Trigger: GGAAGAGATGGAGGATGAGCAGGAGAGCGAGGCGGA...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCCATGACCTACCACAGAGAACAAGAAGCACACAGTCAGAATGCATACAACCCCGGTGAGCCCCAATaGCTGGACACAGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPMTYHREQEAHSQNAYNPGEPQ*LDTGHR Trigger: TCTGTGTCCTGTGTCCAGTCATTGGGGCTCACCGGG...GTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTAGGTCATGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTCCAGTAGAAGAAGTTTGTTGCCTGGCAGCTTTCACAGATATCAGAAGCAGCTGGTGGCCCCGGTaGGCCCCAATGACTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TFPVEEVCCLAAFTDIRSSWWPR*APMTGH Trigger: GTGTCCAGTCATTGGGGCTCACCGGGGCCACCAGCT...GCTTCTGATATCTGTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTCCAGTAGAAGAAGTTTGTTGCCTGGCAGCTTTCACAGATATCAGAAGCCGCACTCGTCACACGTaGCGTCGGGAGGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFPVEEVCCLAAFTDIRSRTRHT*RREAAP Trigger: AGGAGCTGCCTCCCGACGGCACGTGTGACGAGTGCG...GCTTCTGATATCTGTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGAAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACTCCAGGAAGGGAGTCCATATCAAGTTGTTCCTTaGCCTGGGCCATCTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTLQEGSPYQVVP*PGPSES Trigger: TGACTCAGATGGCCCAGGCCAAGGAACAACTTGATA...TGGACTCCCTTCCTGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| 3UTR CAA 72 bp | GACTGTGCACACAAAAACAGGCAGAAGACAATGGATTaGTTGGTTCTACCCACTCACGCGCTGTGGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DCAHKNRQKTMD*LVLPTHALWPV Trigger: GACAGGCCACAGCGCGTGAGTGGGTAGAACCAACAAATCCATTGTCTTCTGCCTGTTTTTGTGTGCACAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCCATGACCTACCACAGAGAACAAGAAGCACACAGTCAGAATGCATACAACGACACAGGACACAGATaGGCTGCCTATCTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPMTYHREQEAHSQNAYNDTGHR*AAYLPD Trigger: GTCAGGAAGATAGGCAGCTCATCTGTGTCCTGTGTC...GTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTAGGTCATGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTGCCAATATACATGCCAGCCTTTTATGTTGTGACAGGCCTGTTAATCCACTCAAATCCAGCCCATaGTCTGGACACTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPANIHASLLCCDRPVNPLKSSP*SGHFLL Trigger: CAAGAGGAAGTGTCCAGACCATGGGCTGGATTTGAG...TGGATTAACAGGCCTGTCACAACATAAAAGGCTGGCATGTATATTGGCAGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR CCA 90 bp | ACATTTCCAGTAGAAGAAGTTTGTTGCCTGGCAGCTTTCACAGATATCAGAAGCTGTCCTCTTCTTCACTaGCACCGCTGGGTCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TFPVEEVCCLAAFTDIRSCPLLH*HRWVLP Trigger: AGGAAGGACCCAGCGGTGCCAGTGAAGAAGAGGACA...GCTTCTGATATCTGTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR GCA 90 bp | CTTCCCATGACCTACCACAGAGAACAAGAAGCACACAGTCAGAATGCATACAACCAACTCTATCATTGCTaGCTTCAGTCCACCGGAATC | + |
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Preference number: 4 (lower is better) Translates to: LPMTYHREQEAHSQNAYNQLYHC*LQSTGI Trigger: GATTCCGGTGGACTGAAGGCAGCAATGATAGAGTTG...GTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTAGGTCATGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 72 bp | CTCCAGTCTTTGCAGACAGATGGTAAGACACCAAAATaGTCTAAGCCATCTACTAGCCACCAGCTGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LQSLQTDGKTPK*SKPSTSHQLGK Trigger: TTTCCCCAGCTGGTGGCTAGTAGATGGCTTAGACAATTTTGGTGTCTTACCATCTGTCTGCAAAGACTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 72 bp | GCAGAGCAGGGAGTGCTGTGCTCAAAACTGGTTCCATaGTTTGTTAGCAACTACAGACAAGTGACTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AEQGVLCSKLVP*FVSNYRQVTCP Trigger: AGGACAAGTCACTTGTCTGTAGTTGCTAACAAACAATGGAACCAGTTTTGAGCACAGCACTCCCTGCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR TCA 90 bp | CTTCCCATGACCTACCACAGAGAACAAGAAGCACACAGTCAGAATGCATACAACTGCCTTTGGCTCAGCTaGTTCATTAGAGGTATCAAG | + |
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Preference number: 4 (lower is better) Translates to: LPMTYHREQEAHSQNAYNCLWLS*FIRGIK Trigger: CTTGATACCTCTAATGAATCAGCTGAGCCAAAGGCA...GTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTAGGTCATGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR CCA 90 bp | AATCCAGCTCCTGGAAGGAACAATGAATACTTACAACATCTACTAGAGCAGAGTGTGAGCCCCAATGACTaGACACAGGACACAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: NPAPGRNNEYLQHLLEQSVSPND*TQDTDE Trigger: CTCATCTGTGTCCTGTGTCCAGTCATTGGGGCTCAC...ACTCTGCTCTAGTAGATGTTGTAAGTATTCATTGTTCCTTCCAGGAGCTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR CCA 90 bp | ACATTTCCAGTAGAAGAAGTTTGTTGCCTGGCAGCTTTCACAGATATCAGAAGCCAGTCACATGAGCCGTaGCCATTGCTTCTTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: TFPVEEVCCLAAFTDIRSQSHEP*PLLLGY Trigger: ATATCCAAGAAGCAATGGCCACGGCTCATGTGACTG...GCTTCTGATATCTGTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 72 bp | TGTGGATCTGGGGACATTTCCAGTAGAAGAAGTTTGTaGCCTGGCAGCTTTCACAGATATCAGAAGCCATTA | + |
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Preference number: 4 (lower is better) Translates to: CGSGDISSRRSL*PGSFHRYQKPL Trigger: TAATGGCTTCTGATATCTGTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGAAATGTCCCCAGATCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR CCA 90 bp | ACAAGCTTCCAAACTGTCAAGTCTTTTCAATCTTGTGATAGTTTACACTCTTTCCTGGACACTTCCTCTTaGCCACTCTCTCCGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TSFQTVKSFQSCDSLHSFLDTSS*PLSPLP Trigger: TGGAAGCGGAGAGAGTGGCCAAGAGGAAGTGTCCAG...GAAAGAGTGTAAACTATCACAAGATTGAAAAGACTTGACAGTTTGGAAGCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR GCA 90 bp | TACAATAAGTCTATGCTGTTTCTGCCTCAGAACTATCCTGTACATACACATGTTCTTCCTGACAATAGGTaGTCAAATCCAGCCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: YNKSMLFLPQNYPVHTHVLPDNR*SNPAHG Trigger: ACCATGGGCTGGATTTGAGCACCTATTGTCAGGAAG...AACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR TCA 90 bp | ACAAGCTTCCAAACTGTCAAGTCTTTTCAATCTTGTGATAGTTTACACTCTTTCAATATCTCAGTCACATaGGCCGTGGCCATTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TSFQTVKSFQSCDSLHSFNISVT*AVAIAS Trigger: AGAAGCAATGGCCACGGCTCATGTGACTGAGATATT...GAAAGAGTGTAAACTATCACAAGATTGAAAAGACTTGACAGTTTGGAAGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR TCA 90 bp | TACAATAAGTCTATGCTGTTTCTGCCTCAGAACTATCCTGTACATACACATGTTATCAACCTATCCATGTaGGATTGGATGTCCGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: YNKSMLFLPQNYPVHTHVINLSM*DWMSAN Trigger: ATTGGCGGACATCCAATCTCACATGGATAGGTTGAT...AACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 72 bp | TTACAACATCTACTAGAGCAGAGTACTAAGGCCATCTaGATGTCTTTGAAAAAGAATTCCGAGTGTGAATGG | + |
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Preference number: 4 (lower is better) Translates to: LQHLLEQSTKAI*MSLKKNSECEW Trigger: CCATTCACACTCGGAATTCTTTTTCAAAGACATCAAGATGGCCTTAGTACTCTGCTCTAGTAGATGTTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 72 bp | AAGCTTCAGTACAAACAAAGTGGGTTTGTTTTCTGTTaGCAGGTAAGGAAAACTGATATCCTTTCGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: KLQYKQSGFVFC*QVRKTDILSRC Trigger: ACATCTCGAAAGGATATCAGTTTTCCTTACCTGCAAACAGAAAACAAACCCACTTTGTTTGTACTGAAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| 3UTR CAA 72 bp | TCTCTGTGGGTCTTTTCTCTTAGGGCAGGGTTAGACTaGATTTATAATGGGACTTTTAACTTTAAACAAACA | + |
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Preference number: 4 (lower is better) Translates to: SLWVFSLRAGLD*IYNGTFNFKQT Trigger: TGTTTGTTTAAAGTTAAAAGTCCCATTATAAATCAAGTCTAACCCTGCCCTAAGAGAAAAGACCCACAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS GCA 90 bp | CCTCCTCCGCCCCGGGCGCCTCGTCGGGTTCGCACTCGTCACACGTaGCGTCGGGAGGCAGCTCCTCGCAGGCCGCGCCCACTCCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: PPPPRAPRRVRTRHT*RREAAPRRPRPLRR Trigger: CCTCCGGAGTGGGCGCGGCCTGCGAGGAGCTGCCTCCCGACGGCACGTGTGACGAGTGCGAACCCGACGAGGCGCCCGGGGCGGAGGAGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS TCA 90 bp | AGTTCTTCGAAGGCTTCGTCCAGCGTGGACAGCTGGTGGCCCCGGTaGGCCCCAATGACTGGACACAGGACACAGATGAGCTGCCTATCT | + |
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Preference number: 5 (lower is better) Translates to: SSSKASSSVDSWWPR*APMTGHRTQMSCLS Trigger: AGATAGGCAGCTCATCTGTGTCCTGTGTCCAGTCATTGGGGCTCACCGGGGCCACCAGCTGTCCACGCTGGACGAAGCCTTCGAAGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS TCA 90 bp | GGCACCGCTGGGTCCTTCCTCGTCACCCTCTGCCTTTGGCTCAGCTaGTTCATTAGAGGTATCAAGTTGTTCCTTGGCCTGGGCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: GTAGSFLVTLCLWLS*FIRGIKLFLGLGHL Trigger: CAGATGGCCCAGGCCAAGGAACAACTTGATACCTCTAATGAATCAGCTGAGCCAAAGGCAGAGGGTGACGAGGAAGGACCCAGCGGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS-3UTR CAA 90 bp | GGGTTAGCTGAAGAGCCCTCCAAGTTGATCAAAAGGGCTCTTCCCATGACCTACTCTGGACACTTCCTCTaGGCCACTCTCTCCGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GLAEEPSKLIKRALPMTYSGHFL*ATLSAS Trigger: GGAAGCGGAGAGAGTGGCCAAGAGGAAGTGTCCAGA...GTAGGTCATGGGAAGAGCCCTTTTGATCAACTTGGAGGGCTCTTCAGCTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS CCA 90 bp | GACAATAGGTGCTCAAATCCAGCCCATGGTCTGGACACTTCCTCTTaGCCACTCTCTCCGCTTCCATCTCTATTTCGGGGTCAAATTCGC | + |
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Preference number: 5 (lower is better) Translates to: DNRCSNPAHGLDTSS*PLSPLPSLFRGQIR Trigger: GCGAATTTGACCCCGAAATAGAGATGGAAGCGGAGAGAGTGGCCAAGAGGAAGTGTCCAGACCATGGGCTGGATTTGAGCACCTATTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS CCA 90 bp | CTGCCTATCTTCCTGACAATAGGTGCTCAAATCCAGCCCATGGTCTaGACACTTCCTCTTGGCCACTCTCTCCGCTTCCATCTCTATTTC | + |
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Preference number: 5 (lower is better) Translates to: LPIFLTIGAQIQPMV*TLPLGHSLRFHLYF Trigger: GAAATAGAGATGGAAGCGGAGAGAGTGGCCAAGAGGAAGTGTCCAGACCATGGGCTGGATTTGAGCACCTATTGTCAGGAAGATAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS-3UTR CAA 90 bp | CATGTTATTAGACATGGTGGAAGAGGGCTGGGTTGTCGTCACCTTGGCTTGGAGAGTCCACCGGAATCTTaGCTTCTCAGTTCTTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: HVIRHGGRGLGCRHLGLESPPES*LLSSSK Trigger: CTTCGAAGAACTGAGAAGCAAAGATTCCGGTGGACT...CTCCAAGCCAAGGTGACGACAACCCAGCCCTCTTCCACCATGTCTAATAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCATGACCTACCACAGAGAACAAGAAGCACACAGTCAGAATGCATACAACCCTATCCATGTGAGATaGGATGTCCGCCAATATCTC | + |
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Preference number: 5 (lower is better) Translates to: LPMTYHREQEAHSQNAYNPIHVR*DVRQYL Trigger: GAGATATTGGCGGACATCCAATCTCACATGGATAGG...GTTGTATGCATTCTGACTGTGTGCTTCTTGTTCTCTGTGGTAGGTCATGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR CAA 90 bp | GCCAATATACATGCCAGCCTTTTATGTTGTGACAGGCCTGTTAATCCACACAGCTTAGGGTCTGAGCTCTaGAACTTTAACCTTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: ANIHASLLCCDRPVNPHSLGSEL*NFNLST Trigger: GGTGGAAAGGTTAAAGTTCAAGAGCTCAGACCCTAA...GCTGTGTGGATTAACAGGCCTGTCACAACATAAAAGGCTGGCATGTATATTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR CAA 90 bp | TACAATAAGTCTATGCTGTTTCTGCCTCAGAACTATCCTGTACATACACATGTTCCACCAACTCTATCATaGCTGCCTTCAGTCCACCGG | + |
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Preference number: 5 (lower is better) Translates to: YNKSMLFLPQNYPVHTHVPPTLS*LPSVHR Trigger: CCGGTGGACTGAAGGCAGCAATGATAGAGTTGGTGG...AACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS-3UTR CAA 90 bp | TACAATAAGTCTATGCTGTTTCTGCCTCAGAACTATCCTGTACATACACATGTTATTAGAGGTATCAAGTaGTTCCTTGGCCTGGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: YNKSMLFLPQNYPVHTHVIRGIK*FLGLGH Trigger: ATGGCCCAGGCCAAGGAACAACTTGATACCTCTAAT...AACATGTGTATGTACAGGATAGTTCTGAGGCAGAAACAGCATAGACTTATTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS GCA 72 bp | CCCCGGGCGCCTCGTCGGGTTCGCACTCGTCACACGTaGCGTCGGGAGGCAGCTCCTCGCAGGCCGCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PRAPRRVRTRHT*RREAAPRRPRP Trigger: TGGGCGCGGCCTGCGAGGAGCTGCCTCCCGACGGCACGTGTGACGAGTGCGAACCCGACGAGGCGCCCGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS CCA 72 bp | CCTCGCCGTCTTCGGGGAGCGCGTCGTCTCCCCCGCTaGCCGGCGGAGTCCAGGCCTGGGCGCCATGGACGT | + |
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Preference number: 6 (lower is better) Translates to: PRRLRGARRLPR*PAESRPGRHGR Trigger: ACGTCCATGGCGCCCAGGCCTGGACTCCGCCGGCCAGCGGGGGAGACGACGCGCTCCCCGAAGACGGCGAGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS TCA 72 bp | CCTGGGCGCCATGGACGTAGGCAGCCAGGCGGTGGCTaGGGAACTTCTGGCGATGCGCGTCGGCGTGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGRHGRRQPGGG*GTSGDARRRGG Trigger: GCCGCCACGCCGACGCGCATCGCCAGAAGTTCCTCAGCCACCGCCTGGCTGCCTACGTCCATGGCGCCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS TCA 72 bp | AAGGCTTCGTCCAGCGTGGACAGCTGGTGGCCCCGGTaGGCCCCAATGACTGGACACAGGACACAGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: KASSSVDSWWPR*APMTGHRTQMS Trigger: GCTCATCTGTGTCCTGTGTCCAGTCATTGGGGCTCACCGGGGCCACCAGCTGTCCACGCTGGACGAAGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS CCA 72 bp | CGTGGACAGCTGGTGGCCCCGGTGAGCCCCAATGACTaGACACAGGACACAGATGAGCTGCCTATCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGQLVAPVSPND*TQDTDELPIFL Trigger: CAGGAAGATAGGCAGCTCATCTGTGTCCTGTGTCCAGTCATTGGGGCTCACCGGGGCCACCAGCTGTCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS CAA 72 bp | GTGCTCAAATCCAGCCCATGGTCTGGACACTTCCTCTaGGCCACTCTCTCCGCTTCCATCTCTATTTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLKSSPWSGHFL*ATLSASISISG Trigger: CCCCGAAATAGAGATGGAAGCGGAGAGAGTGGCCAAGAGGAAGTGTCCAGACCATGGGCTGGATTTGAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS CCA 72 bp | TGCTCAAATCCAGCCCATGGTCTGGACACTTCCTCTTaGCCACTCTCTCCGCTTCCATCTCTATTTCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CSNPAHGLDTSS*PLSPLPSLFRG Trigger: ACCCCGAAATAGAGATGGAAGCGGAGAGAGTGGCCAAGAGGAAGTGTCCAGACCATGGGCTGGATTTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS TCA 72 bp | GGGTCCTTCCTCGTCACCCTCTGCCTTTGGCTCAGCTaGTTCATTAGAGGTATCAAGTTGTTCCTTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSFLVTLCLWLS*FIRGIKLFLGL Trigger: CAGGCCAAGGAACAACTTGATACCTCTAATGAATCAGCTGAGCCAAAGGCAGAGGGTGACGAGGAAGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102573.8 ENSMUST00000152929.2 |
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| CDS CAA 90 bp | TTCCTTGGCCTGGGCCATCTGAGTCATCAACCTATCCATGTGAGATaGGATGTCCGCCAATATCTCAGTCACATGAGCCGTGGCCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLGLGHLSHQPIHVR*DVRQYLSHMSRGHC Trigger: GCAATGGCCACGGCTCATGTGACTGAGATATTGGCGGACATCCAATCTCACATGGATAGGTTGATGACTCAGATGGCCCAGGCCAAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102573.8 ENSMUST00000144110.2 ENSMUST00000152929.2 |
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| CDS CAA 72 bp | CTGGGCCATCTGAGTCATCAACCTATCCATGTGAGATaGGATGTCCGCCAATATCTCAGTCACATGAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LGHLSHQPIHVR*DVRQYLSHMSR Trigger: ACGGCTCATGTGACTGAGATATTGGCGGACATCCAATCTCACATGGATAGGTTGATGACTCAGATGGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102573.8 ENSMUST00000144110.2 ENSMUST00000152929.2 |
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| CDS CAA 90 bp | GAGATTGGATGTCCGCCAATATCTCAGTCACATGAGCCGTGGCCATaGCTTCTTGGATATCCACTAAATGAAGGGCCTTCTGCTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EIGCPPISQSHEPWP*LLGYPLNEGPSAPH Trigger: ATGAGGAGCAGAAGGCCCTTCATTTAGTGGATATCCAAGAAGCAATGGCCACGGCTCATGTGACTGAGATATTGGCGGACATCCAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102573.8 ENSMUST00000144110.2 ENSMUST00000152929.2 |
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| CDS CAA 72 bp | TGTCCGCCAATATCTCAGTCACATGAGCCGTGGCCATaGCTTCTTGGATATCCACTAAATGAAGGGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CPPISQSHEPWP*LLGYPLNEGPS Trigger: AGAAGGCCCTTCATTTAGTGGATATCCAAGAAGCAATGGCCACGGCTCATGTGACTGAGATATTGGCGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102573.8 ENSMUST00000144110.2 ENSMUST00000152929.2 |
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| CDS CCA 72 bp | ATTGGATGTCCGCCAATATCTCAGTCACATGAGCCGTaGCCATTGCTTCTTGGATATCCACTAAATGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: IGCPPISQSHEP*PLLLGYPLNEG Trigger: CCCTTCATTTAGTGGATATCCAAGAAGCAATGGCCACGGCTCATGTGACTGAGATATTGGCGGACATCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102573.8 ENSMUST00000144110.2 ENSMUST00000152929.2 |
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| CDS CAA 72 bp | TTCATCTGGTCTCGAGTTACTTTAGGGTCTGAGCTCTaGAACTTTAACCTTTCCACCAACTCTATCATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FIWSRVTLGSEL*NFNLSTNSIIA Trigger: AGCAATGATAGAGTTGGTGGAAAGGTTAAAGTTCAAGAGCTCAGACCCTAAAGTAACTCGAGACCAGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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| CDS CAA 90 bp | ATAAATATCTTCATCTGGTCTCGAGTTACTTTAGGGTCTGAGCTCTaGAACTTTAACCTTTCCACCAACTCTATCATTGCTGCCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: INIFIWSRVTLGSEL*NFNLSTNSIIAAFS Trigger: ACTGAAGGCAGCAATGATAGAGTTGGTGGAAAGGTTAAAGTTCAAGAGCTCAGACCCTAAAGTAACTCGAGACCAGATGAAGATATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102573.8 |
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