Pregenerated sensors for TRIM41 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040365Ensembl transcript IDs: ENSMUST00000047145.14, ENSMUST00000131888.8, ENSMUST00000138019.2, ENSMUST00000140800.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCTGGGTTCAAGAGGGAGCAGGAAGCAACTCAGTAACAAACAGTaGGAGGAATCCAGGCTCCCAAAACAGTGGGCAACCATCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: SLGSRGSRKQLSNKQ*EESRLPKQWATIHH Trigger: GTGGTGGATGGTTGCCCACTGTTTTGGGAGCCTGGATTCCTCCCACTGTTTGTTACTGAGTTGCTTCCTGCTCCCTCTTGAACCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR-3UTR CCA 90 bp | TCTCCACACATCCCCAGAGCTGAGCTAGGCGGGAGGGGAGGTCATCAGGCAGCTGAGGGAGAAGCAGCCTaGGTTCAAGAGGGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SPHIPRAELGGRGGHQAAEGEAA*VQEGAG Trigger: TCCTGCTCCCTCTTGAACCCAGGCTGCTTCTCCCTC...AGCTGCCTGATGACCTCCCCTCCCGCCTAGCTCAGCTCTGGGGATGTGTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR-3UTR CCA 90 bp | TCTCCACACATCCCCAGAGCTGAGCTAGGCGGGAGGGGAGGTCATCAGGCAGCTCTCAGTAACAAACAGTaGGAGGAATCCAGGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SPHIPRAELGGRGGHQAALSNKQ*EESRLP Trigger: TGGGAGCCTGGATTCCTCCCACTGTTTGTTACTGAG...AGCTGCCTGATGACCTCCCCTCCCGCCTAGCTCAGCTCTGGGGATGTGTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR-3UTR TCA 90 bp | TCTCCACACATCCCCAGAGCTGAGCTAGGCGGGAGGGGAGGTCATCAGGCAGCTTCTAGGAGGTCTTTTTaGCTCCTAGAGGGAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPHIPRAELGGRGGHQAASRRSF*LLEGEA Trigger: TGCTTCTCCCTCTAGGAGTCAAAAAGACCTCCTAGA...AGCTGCCTGATGACCTCCCCTCCCGCCTAGCTCAGCTCTGGGGATGTGTGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR-3UTR CCA 90 bp | CTGACCATCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAAGGCTCCCAAAACAGTaGGCAACCATCCACCACCAC | + |
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Preference number: 2 (lower is better) Translates to: LTISDLTEAKFWPVYGGRRLPKQ*ATIHHH Trigger: GTGGTGGTGGATGGTTGCCCACTGTTTTGGGAGCCT...TCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGATGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAAATTGGGCCCTTTTGCCCAGCCTaGTTGCCTAGACAGCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: SQISLKLNSGQSMEVEIGPFCPA*LPRQLL Trigger: TAGGAGCTGTCTAGGCAATCAGGCTGGGCAAAAGGG...CCCAATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAAAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTATCATCAGGCAGCTGTTaGTTATCAGGGACCCATGCA | + |
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Preference number: 2 (lower is better) Translates to: PRKSRLTQLYPFAQPDCLSSGSC*LSGTHA Trigger: TGCATGGGTCCCTGATAACCAACAGCTGCCTGATGA...TAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTTTCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGAAAGCTTTAGTGTTCCTACTTCCCCAAGAAAAAGTAGACTTACACAGCGTTATCAGGGACCCATaGAGACCTGTCAGACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: GRKALVFLLPQEKVDLHSVIRDP*RPVRQS Trigger: ACTTTGTCTGACAGGTCTGCATGGGTCCCTGATAAC...GCTGTGTAAGTCTACTTTTTCTTGGGGAAGTAGGAACACTAAAGCTTTCCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCAGTGAAAAAGGAAAGTTaGGGAATTATCTCCACACAT | + |
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Preference number: 2 (lower is better) Translates to: QRENNLLGNVCGVMLTISVKKES*GIISTH Trigger: ATGTGTGGAGATAATTCCTCAACTTTCCTTTTTCAC...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| 3UTR TCA 72 bp | AAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTaGCCATCTCAGATCTCACTGAAGCTAAATTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: KIIYWVMYVVSC*PSQISLKLNSG Trigger: GCCAGAATTTAGCTTCAGTGAGATCTGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | TCTCCACACATCCCCAGAGCTGAGCTAGGCGGGAGGGGAGGTCATCAGGCAGCTTGGCCAACTGCAGGTTaGGGCGGAAGCTCCGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SPHIPRAELGGRGGHQAAWPTAG*GGSSAE Trigger: CTCGGCGGAGCTTCCGCCCCAACCTGCAGTTGGCCA...AGCTGCCTGATGACCTCCCCTCCCGCCTAGCTCAGCTCTGGGGATGTGTGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CGGGAGGGGAGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGGCTCTTCAAGGCGGTTaGCTGCTGCTCCCGCACGTC | + |
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Preference number: 4 (lower is better) Translates to: REGRSSGSCWLSGTHADLALQGG*LLLPHV Trigger: GACGTGCGGGAGCAGCAGCCAACCGCCTTGAAGAGC...CAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCTCCCCTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CGGGAGGGGAGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGCCAGAGCGGAAGCCCTaGGCCCCTAGTACACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: REGRSSGSCWLSGTHADLPERKP*APSTQQ Trigger: CTGCTGTGTACTAGGGGCCCAGGGCTTCCGCTCTGG...CAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCTCCCCTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CGGGAGGGGAGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGAGCAAGCGGCTCAGCTaGGCAGCCTGCTCTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: REGRSSGSCWLSGTHADLSKRLS*AACSSR Trigger: CCTTGAAGAGCAGGCTGCCCAGCTGAGCCGCTTGCT...CAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCTCCCCTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | TCTCCACACATCCCCAGAGCTGAGCTAGGCGGGAGGGGAGGTCATCAGGCAGCTCAGTGTCTGCTCTGTTaGGCTCTGTGCCTGGTATCG | + |
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Preference number: 4 (lower is better) Translates to: SPHIPRAELGGRGGHQAAQCLLC*ALCLVS Trigger: CGATACCAGGCACAGAGCTCAACAGAGCAGACACTG...AGCTGCCTGATGACCTCCCCTCCCGCCTAGCTCAGCTCTGGGGATGTGTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR GCA 90 bp | TCTCCACACATCCCCAGAGCTGAGCTAGGCGGGAGGGGAGGTCATCAGGCAGCTGCAGCTGAGAAGGTGTaGACATGGGCTAAGGTATCC | + |
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Preference number: 4 (lower is better) Translates to: SPHIPRAELGGRGGHQAAAAEKV*TWAKVS Trigger: GGATACCTTAGCCCATGTGCACACCTTCTCAGCTGC...AGCTGCCTGATGACCTCCCCTCCCGCCTAGCTCAGCTCTGGGGATGTGTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CGGGAGGGGAGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGTCTGTCAGGAAGTCGTaGCTATGGGGTTGGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: REGRSSGSCWLSGTHADLSVRKS*LWGWHG Trigger: CCCATGCCAACCCCATAGCCACGACTTCCTGACAGA...CAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCTCCCCTCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | CGGGAGGGGAGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGAGCTTCAGGGCTTCTTaGTGTCTCGGACAGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: REGRSSGSCWLSGTHADLSFRAS*CLGQMP Trigger: AGGCATCTGTCCGAGACATCAAGAAGCCCTGAAGCT...CAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCTCCCCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR GCA 90 bp | TCTCCACACATCCCCAGAGCTGAGCTAGGCGGGAGGGGAGGTCATCAGGCAGCTTGTCAGGTCCACTCTTaGAGCCTGACAAAACATGCG | + |
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Preference number: 4 (lower is better) Translates to: SPHIPRAELGGRGGHQAACQVHS*SLTKHA Trigger: CGCATGTTTTGTCAGGCTGCAAGAGTGGACCTGACA...AGCTGCCTGATGACCTCCCCTCCCGCCTAGCTCAGCTCTGGGGATGTGTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | AGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGTCAGACAAAGGGTCTGCACAGGGTTaGGTGTCATGGCAACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RSSGSCWLSGTHADLSDKGSAQG*VSWQRQ Trigger: CTGCCGTTGCCATGACACCCAACCCTGTGCAGACCC...TTTGTCTGACAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CTGACCATCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGACCGAGGGGCTGGAGGTaGCGGCAGTTGGGTGATCGG | + |
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Preference number: 4 (lower is better) Translates to: LTISDLTEAKFWPVYGGRPRGWR*RQLGDR Trigger: CCGATCACCCAACTGCCGCCACCTCCAGCCCCTCGG...TCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGATGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | CCAAGAAAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTATGGAGTAGGAGCTGCTaGGGCAGATGGAGCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PRKSRLTQLYPFAQPDCLWSRSC*GRWSRR Trigger: CCGCCGGCTCCATCTGCCTCAGCAGCTCCTACTCCA...TAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTTTCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | TCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAAATTGGGGCATCTCCGAGGGGCTaGAGGTGGCGGCAGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SQISLKLNSGQSMEVEIGASPRG*RWRQLG Trigger: ACCCAACTGCCGCCACCTCCAGCCCCTCGGAGATGC...CCCAATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | TCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAAATTGGGCACACCGCCTCCTCCTaGAGGGTCTGCACAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SQISLKLNSGQSMEVEIGHTASS*RVCTGL Trigger: CAACCCTGTGCAGACCCTTCAGGAGGAGGCGGTGTG...CCCAATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | CCAAGAAAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTAGACACTGGGGACAAGTaGAGCATCTCCGAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRKSRLTQLYPFAQPDCLDTGDK*SISEGL Trigger: CAGCCCCTCGGAGATGCTTCACTTGTCCCCAGTGTC...TAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTTTCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR GCA 90 bp | AAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTAGACAGCATCGTTTGCCGTGGGTaGCCACACACCACACTTCGC | + |
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Preference number: 4 (lower is better) Translates to: KSRLTQLYPFAQPDCLDSIVCRG*PHTTLR Trigger: GCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGAT...GCTGTCTAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | AGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGTCAGACAAAAGGGGACCAAATCTCTaGGGGCTGCAACTGTATCTC | + |
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Preference number: 4 (lower is better) Translates to: RSSGSCWLSGTHADLSDKRGPNL*GLQLYL Trigger: GAGATACAGTTGCAGCCCCCAGAGATTTGGTCCCCT...TTTGTCTGACAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CTGACCATCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAGGACAGCAGCAGAGCTaGGTGAGCTGTGTCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LTISDLTEAKFWPVYGGRGQQQS*VSCVRV Trigger: GACCCTGACACAGCTCACCCAGCTCTGCTGCTGTCC...TCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGATGGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | TCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAAATTGGGGGAGTTGGGTGCATCTaGCGGATCACCTGGACCATG | + |
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Preference number: 4 (lower is better) Translates to: SQISLKLNSGQSMEVEIGGVGCI*RITWTM Trigger: CATGGTCCAGGTGATCCGTCAGATGCACCCAACTCC...CCCAATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | AAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTAGACAGCGTTTCTCACATGGGCTaGGCAGTGTCTGCTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: KSRLTQLYPFAQPDCLDSVSHMG*AVSALL Trigger: CAACAGAGCAGACACTGCTCAGCCCATGTGAGAAAC...GCTGTCTAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | AGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGTCAGACAAATCATTTTCCTCACGATaGCGTCTGTCAGGAAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: RSSGSCWLSGTHADLSDKSFSSR*RLSGSR Trigger: ACGACTTCCTGACAGACGCCATCGTGAGGAAAATGA...TTTGTCTGACAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | TCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAAATTGGGTACGCCAAAGCGCCGTaGTTTCTCACATGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SQISLKLNSGQSMEVEIGYAKAP*FLTWAE Trigger: CTCAGCCCATGTGAGAAACCACGGCGCTTTGGCGTA...CCCAATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | CCAAGAAAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTATCCACTCTTGCAGCCTaGCAAAACATGCGGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: PRKSRLTQLYPFAQPDCLSTLAA*QNMRLI Trigger: AATGAGCCGCATGTTTTGTCAGGCTGCAAGAGTGGA...TAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTTTCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | CCAAGAAAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTATTCTTTATGATGGGTTaGTTCACGGGCAGCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: PRKSRLTQLYPFAQPDCLFFMMG*FTGSTH Trigger: GTGGGTGCTGCCCGTGAATCAACCCATCATAAAGAA...TAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTTTCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR GCA 90 bp | CTGACCATCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAGATGTCTCGGACAGATaGCTTGTTCATTCACACGGC | + |
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Preference number: 4 (lower is better) Translates to: LTISDLTEAKFWPVYGGRDVSDR*LVHSHG Trigger: GCCGTGTGAATGAACAAGGCATCTGTCCGAGACATC...TCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGATGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CTGACCATCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAAGCTCTGACTTCATCTaGCTCTTCAGCTCTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: LTISDLTEAKFWPVYGGRSSDFI*LFSSVT Trigger: GGTGACAGAGCTGAAGAGCCAGATGAAGTCAGAGCT...TCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGATGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CTGACCATCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAGAGAAGGTGTGCACATaGGCTAAGGTATCCGCATTG | + |
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Preference number: 4 (lower is better) Translates to: LTISDLTEAKFWPVYGGREKVCT*AKVSAL Trigger: CAATGCGGATACCTTAGCCCATGTGCACACCTTCTC...TCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGATGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCAGCGATGATGATGGCGTaGGGAGCTGGCATCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: QRENNLLGNVCGVMLTISAMMMA*GAGIPT Trigger: AGTGGGGATGCCAGCTCCTCACGCCATCATCATCGC...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCATCGTGGCTATGGGGTTaGCATGGGTCAGGGGACCAA | + |
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Preference number: 4 (lower is better) Translates to: QRENNLLGNVCGVMLTISSWLWG*HGSGDQ Trigger: TTGGTCCCCTGACCCATGCCAACCCCATAGCCACGA...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR TCA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCACACAGCTGCCAGCTCTaGCTTCATCTGGCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: QRENNLLGNVCGVMLTISHSCQL*LHLALQ Trigger: CTGAAGAGCCAGATGAAGTCAGAGCTGGCAGCTGTG...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR GCA 90 bp | GGAAGGAAAGCTTTAGTGTTCCTACTTCCCCAAGAAAAAGTAGACTTACACAGCCTCTCTAATCCTGCCTaGTCTTCAGCCAGAAACCTT | + |
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Preference number: 4 (lower is better) Translates to: GRKALVFLLPQEKVDLHSLSNPA*SSARNL Trigger: AAGGTTTCTGGCTGAAGAGCAGGCAGGATTAGAGAG...GCTGTGTAAGTCTACTTTTTCTTGGGGAAGTAGGAACACTAAAGCTTTCCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR GCA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCACTAAGTGGTTCCACATaGCCTTGTAGCTTGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QRENNLLGNVCGVMLTISLSGST*PCSLAL Trigger: CAAGGCCAAGCTACAAGGGCATGTGGAACCACTTAG...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CCA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCACAGCTGAGAAGCGCTTaGAATGTTCAGGAACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QRENNLLGNVCGVMLTISQLRSA*NVQEPP Trigger: AGGAGGTTCCTGAACATTCCAAGCGCTTCTCAGCTG...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR GCA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCACAGCCTGACAAAACATaGGGCTCATTTTCCTCACGA | + |
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Preference number: 4 (lower is better) Translates to: QRENNLLGNVCGVMLTISQPDKT*GSFSSR Trigger: TCGTGAGGAAAATGAGCCGCATGTTTTGTCAGGCTG...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 90 bp | CCCTGTTGGCTCCGTTCTTGGGCTTCAGCAAGCAAGCGGCTCAGCTaGGCAGCCTGCTCTTCAAGGCGGTTGGCTGCTGCTCCCGCACGT | + |
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Preference number: 5 (lower is better) Translates to: PCWLRSWASASKRLS*AACSSRRLAAAPAR Trigger: ACGTGCGGGAGCAGCAGCCAACCGCCTTGAAGAGCAGGCTGCCCAGCTGAGCCGCTTGCTTGCTGAAGCCCAAGAACGGAGCCAACAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047145.14 ENSMUST00000131888.8 |
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| CDS TCA 90 bp | GCCTGCTCTTCAAGGCGGTTGGCTGCTGCTCCCGCACGTCCTAACTaGGCTTCGTGCATCTCCCGGAGGCGCCTCTCTAATCCTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ACSSRRLAAAPARPN*ASCISRRRLSNPAC Trigger: GCAGGCAGGATTAGAGAGGCGCCTCCGGGAGATGCACGAAGCTCAGTTAGGACGTGCGGGAGCAGCAGCCAACCGCCTTGAAGAGCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047145.14 ENSMUST00000131888.8 ENSMUST00000140800.2 |
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| CDS CCA 90 bp | TGGGGACAAGTGAAGCATCTCCGAGGGGCTGGAGGTGGCGGCAGTTaGGTGATCGGGTCTAGCTCCTCTTCCTCGTCTTCCTCCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: WGQVKHLRGAGGGGS*VIGSSSSSSSSSST Trigger: AGTGCTGGAGGAAGACGAGGAAGAGGAGCTAGACCCGATCACCCAACTGCCGCCACCTCCAGCCCCTCGGAGATGCTTCACTTGTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047145.14 ENSMUST00000138019.2 |
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| CDS GCA 90 bp | ACACAGCAGTCAGCTGAGAAGCGCTTGGAATGTTCAGGAACCTCCTaGCGACGTTCTGCCAAGCGGACTCCACGGCGATCAGGGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: TQQSAEKRLECSGTS*RRSAKRTPRRSGDS Trigger: GCTGTCCCCTGATCGCCGTGGAGTCCGCTTGGCAGAACGTCGGCAGGAGGTTCCTGAACATTCCAAGCGCTTCTCAGCTGACTGCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS GCA 90 bp | GTGTCTGCTCTGTTGAGCTCTGTGCCTGGTATCGTTTGCCGTGGGTaGCCACACACCACACTTCGCGCTGGAGTAGGAGCTGCTGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: VSALLSSVPGIVCRG*PHTTLRAGVGAAEA Trigger: TGCCTCAGCAGCTCCTACTCCAGCGCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 90 bp | GGAAGCCCTGGGCCCCTAGTACACAGCAGTCAGCTGAGAAGCGCTTaGAATGTTCAGGAACCTCCTGCCGACGTTCTGCCAAGCGGACTC | + |
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Preference number: 5 (lower is better) Translates to: GSPGPLVHSSQLRSA*NVQEPPADVLPSGL Trigger: GAGTCCGCTTGGCAGAACGTCGGCAGGAGGTTCCTGAACATTCCAAGCGCTTCTCAGCTGACTGCTGTGTACTAGGGGCCCAGGGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 90 bp | TTCTCACATGGGCTGAGCAGTGTCTGCTCTGTTGAGCTCTGTGCCTaGTATCGTTTGCCGTGGGTGCCCACACACCACACTTCGCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FSHGLSSVCSVELCA*YRLPWVPTHHTSRW Trigger: CCAGCGCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAGCCCATGTGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS TCA 90 bp | AAAGCGCCGTGGTTTCTCACATGGGCTGAGCAGTGTCTGCTCTGTTaGGCTCTGTGCCTGGTATCGTTTGCCGTGGGTGCCCACACACCA | + |
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Preference number: 5 (lower is better) Translates to: KAPWFLTWAEQCLLC*ALCLVSFAVGAHTP Trigger: TGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAGCCCATGTGAGAAACCACGGCGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS GCA 90 bp | TATACGCCAAAGCGCCGTGGTTTCTCACATGGGCTGAGCAGTGTCTaGTCTGTTGAGCTCTGTGCCTGGTATCGTTTGCCGTGGGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: YTPKRRGFSHGLSSV*SVELCAWYRLPWVP Trigger: GGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAGCCCATGTGAGAAACCACGGCGCTTTGGCGTATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | AAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTAGACAGCTTGGCCAACTGCAGGTaGGGGCGGAAGCTCCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: KSRLTQLYPFAQPDCLDSLANCR*GRKLRR Trigger: TCGGCGGAGCTTCCGCCCCAACCTGCAGTTGGCCAA...GCTGTCTAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | CGGGAGGGGAGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGTTTCTTTATGATGGGTaGATTCACGGGCAGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: REGRSSGSCWLSGTHADLFLYDG*IHGQHP Trigger: TGGGTGCTGCCCGTGAATCAACCCATCATAAAGAAA...CAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCTCCCCTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS TCA 90 bp | CATAGTCCAGGTATACGCCAAAGCGCCGTGGTTTCTCACATGGGCTaGGCAGTGTCTGCTCTGTTGAGCTCTGTGCCTGGTATCGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: HSPGIRQSAVVSHMG*AVSALLSSVPGIVC Trigger: GCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAGCCCATGTGAGAAACCACGGCGCTTTGGCGTATACCTGGACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | CCAAGAAAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTATCCCTCGCCCAGGAGTaGGGTGCATCTGACGGATCA | + |
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Preference number: 5 (lower is better) Translates to: PRKSRLTQLYPFAQPDCLSLAQE*GASDGS Trigger: TGATCCGTCAGATGCACCCAACTCCTGGGCGAGGGA...TAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTTTCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | AGGTCATCAGGCAGCTGTTGGTTATCAGGGACCCATGCAGACCTGTCAGACAAACTTCAGCCAGAAACCTaGTTAGCCGCCCAAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: RSSGSCWLSGTHADLSDKLQPET*LAAQTL Trigger: CAGAGTTTGGGCGGCTAACAAGGTTTCTGGCTGAAG...TTTGTCTGACAGGTCTGCATGGGTCCCTGATAACCAACAGCTGCCTGATGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | CCAAGAAAAAGTAGACTTACACAGCTCTACCCTTTTGCCCAGCCTGATTGCCTAACCCGCCTCTCCTCCTaGGCCTTCATCTTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: PRKSRLTQLYPFAQPDCLTRLSS*AFIFCT Trigger: TGTGCAGAAGATGAAGGCCAAGGAGGAGAGGCGGGT...TAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTGTAAGTCTACTTTTTCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | TCTCAGATCTCACTGAAGCTAAATTCTGGCCAGTCTATGGAGGTAGAAATTGGGCAGCTTCAGGGCTTCTaGATGTCTCGGACAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQISLKLNSGQSMEVEIGQLQGF*MSRTDA Trigger: GGCATCTGTCCGAGACATCAAGAAGCCCTGAAGCTG...CCCAATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTGAGATCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | GGAAGGAAAGCTTTAGTGTTCCTACTTCCCCAAGAAAAAGTAGACTTACACAGCGCAGTGTCTGCTCTGTaGAGCTCTGTGCCTGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: GRKALVFLLPQEKVDLHSAVSAL*SSVPGI Trigger: GATACCAGGCACAGAGCTCAACAGAGCAGACACTGC...GCTGTGTAAGTCTACTTTTTCTTGGGGAAGTAGGAACACTAAAGCTTTCCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCAAGGGTCTGCACAGGGTaGGGTGTCATGGCAACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRENNLLGNVCGVMLTISRVCTG*GVMATA Trigger: TGCCGTTGCCATGACACCCAACCCTGTGCAGACCCT...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS-3UTR CAA 90 bp | CAGAGAGAAAATAATTTATTGGGTAATGTATGTGGTGTCATGCTGACCATCTCACTATTGAAAGTCTCCTaGATGTCTTGCAGTAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: QRENNLLGNVCGVMLTISLLKVS*MSCSSR Trigger: GCGGCTACTGCAAGACATCAAGGAGACTTTCAATAG...TGAGATGGTCAGCATGACACCACATACATTACCCAATAAATTATTTTCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS GCA 72 bp | TGGGCTTCAGCAAGCAAGCGGCTCAGCTGGGCAGCCTaGTCTTCAAGGCGGTTGGCTGCTGCTCCCGCACGT | + |
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Preference number: 6 (lower is better) Translates to: WASASKRLSWAA*SSRRLAAAPAR Trigger: ACGTGCGGGAGCAGCAGCCAACCGCCTTGAAGAGCAGGCTGCCCAGCTGAGCCGCTTGCTTGCTGAAGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047145.14 ENSMUST00000131888.8 |
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| CDS TCA 72 bp | AGCATCTCCGAGGGGCTGGAGGTGGCGGCAGTTGGGTaGTCGGGTCTAGCTCCTCTTCCTCGTCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SISEGLEVAAVG*SGLAPLPRLPP Trigger: TGGAGGAAGACGAGGAAGAGGAGCTAGACCCGATCACCCAACTGCCGCCACCTCCAGCCCCTCGGAGATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047145.14 ENSMUST00000138019.2 |
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| CDS GCA 72 bp | GCGCTTGGAATGTTCAGGAACCTCCTGCCGACGTTCTaGCAAGCGGACTCCACGGCGATCAGGGGACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ALGMFRNLLPTF*QADSTAIRGQQ Trigger: CTGCTGTCCCCTGATCGCCGTGGAGTCCGCTTGGCAGAACGTCGGCAGGAGGTTCCTGAACATTCCAAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 72 bp | GTGAAGCATCTCCGAGGGGCTGGAGGTGGCGGCAGTTaGGTGATCGGGTCTAGCTCCTCTTCCTCGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VKHLRGAGGGGS*VIGSSSSSSSS Trigger: GGAAGACGAGGAAGAGGAGCTAGACCCGATCACCCAACTGCCGCCACCTCCAGCCCCTCGGAGATGCTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047145.14 ENSMUST00000138019.2 |
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| CDS CAA 90 bp | GGGCTGAGCAGTGTCTGCTCTGTTGAGCTCTGTGCCTGGTATCGTTaGCCGTGGGTGCCCACACACCACACTTCGCGCTGGAGTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GLSSVCSVELCAWYR*PWVPTHHTSRWSRS Trigger: GCTCCTACTCCAGCGCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS TCA 72 bp | TCAAGGCGGTTGGCTGCTGCTCCCGCACGTCCTAACTaGGCTTCGTGCATCTCCCGGAGGCGCCTCTCTAAT | + |
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Preference number: 6 (lower is better) Translates to: SRRLAAAPARPN*ASCISRRRLSN Trigger: ATTAGAGAGGCGCCTCCGGGAGATGCACGAAGCTCAGTTAGGACGTGCGGGAGCAGCAGCCAACCGCCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047145.14 ENSMUST00000131888.8 ENSMUST00000140800.2 |
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| CDS CAA 90 bp | CCCGGAGGCGCCTCTCTAATCCTGCCTGCTCTTCAGCCAGAAACCTaGTTAGCCGCCCAAACTCTGAGGCCACAGCTGCCAGCTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: PGGASLILPALQPET*LAAQTLRPQLPALT Trigger: AGTCAGAGCTGGCAGCTGTGGCCTCAGAGTTTGGGCGGCTAACAAGGTTTCTGGCTGAAGAGCAGGCAGGATTAGAGAGGCGCCTCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047145.14 ENSMUST00000131888.8 ENSMUST00000140800.2 |
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| CDS CAA 90 bp | CGGAAGCCCTGGGCCCCTAGTACACAGCAGTCAGCTGAGAAGCGCTaGGAATGTTCAGGAACCTCCTGCCGACGTTCTGCCAAGCGGACT | + |
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Preference number: 6 (lower is better) Translates to: RKPWAPSTQQSAEKR*ECSGTSCRRSAKRT Trigger: AGTCCGCTTGGCAGAACGTCGGCAGGAGGTTCCTGAACATTCCAAGCGCTTCTCAGCTGACTGCTGTGTACTAGGGGCCCAGGGCTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS GCA 72 bp | CTGTTGAGCTCTGTGCCTGGTATCGTTTGCCGTGGGTaGCCACACACCACACTTCGCGCTGGAGTAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LLSSVPGIVCRG*PHTTLRAGVGA Trigger: AGCTCCTACTCCAGCGCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS GCA 72 bp | GTGTCTGCTCTGTTGAGCTCTGTGCCTGGTATCGTTTaGCGTGGGTGCCCACACACCACACTTCGCGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VSALLSSVPGIV*RGCPHTTLRAG Trigger: TCCAGCGCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 72 bp | TGCTCTGTTGAGCTCTGTGCCTGGTATCGTTTGCCGTaGGTGCCCACACACCACACTTCGCGCTGGAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSVELCAWYRLP*VPTHHTSRWSR Trigger: CCTACTCCAGCGCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 72 bp | GGGCTGAGCAGTGTCTGCTCTGTTGAGCTCTGTGCCTaGTATCGTTTGCCGTGGGTGCCCACACACCACACT | + |
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Preference number: 6 (lower is better) Translates to: GLSSVCSVELCA*YRLPWVPTHHT Trigger: AGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CAA 72 bp | AGTGTCTGCTCTGTTGAGCTCTGTGCCTGGTATCGTTaGCCGTGGGTGCCCACACACCACACTTCGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVCSVELCAWYR*PWVPTHHTSRW Trigger: CCAGCGCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS GCA 72 bp | TCGTGCATCTCCCGGAGGCGCCTCTCTAATCCTGCCTaGTCTTCAGCCAGAAACCTTGTTAGCCGCCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SCISRRRLSNPA*SSARNLVSRPN Trigger: GTTTGGGCGGCTAACAAGGTTTCTGGCTGAAGAGCAGGCAGGATTAGAGAGGCGCCTCCGGGAGATGCACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047145.14 ENSMUST00000131888.8 ENSMUST00000140800.2 |
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| CDS GCA 72 bp | TCAGCTGAGAAGCGCTTGGAATGTTCAGGAACCTCCTaGCGACGTTCTGCCAAGCGGACTCCACGGCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: SAEKRLECSGTS*RRSAKRTPRRS Trigger: TGATCGCCGTGGAGTCCGCTTGGCAGAACGTCGGCAGGAGGTTCCTGAACATTCCAAGCGCTTCTCAGCTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 72 bp | TTCCTCACGATGGCGTCTGTCAGGAAGTCGTGGCTATaGGGTTGGCATGGGTCAGGGGACCAAATCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLTMASVRKSWL*GWHGSGDQISG Trigger: CCCAGAGATTTGGTCCCCTGACCCATGCCAACCCCATAGCCACGACTTCCTGACAGACGCCATCGTGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 72 bp | GGGCCCCTAGTACACAGCAGTCAGCTGAGAAGCGCTTaGAATGTTCAGGAACCTCCTGCCGACGTTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPLVHSSQLRSA*NVQEPPADVLP Trigger: TGGCAGAACGTCGGCAGGAGGTTCCTGAACATTCCAAGCGCTTCTCAGCTGACTGCTGTGTACTAGGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS TCA 72 bp | GGTATACGCCAAAGCGCCGTGGTTTCTCACATGGGCTaGGCAGTGTCTGCTCTGTTGAGCTCTGTGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GIRQSAVVSHMG*AVSALLSSVPG Trigger: ACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAGCCCATGTGAGAAACCACGGCGCTTTGGCGTATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS GCA 72 bp | AAGCGCCGTGGTTTCTCACATGGGCTGAGCAGTGTCTaGTCTGTTGAGCTCTGTGCCTGGTATCGTTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KRRGFSHGLSSV*SVELCAWYRLP Trigger: CGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAGCCCATGTGAGAAACCACGGCGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CCA 72 bp | CCCAGCCTCATAGTCCAGGTATACGCCAAAGCGCCGTaGTTTCTCACATGGGCTGAGCAGTGTCTGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLIVQVYAKAP*FLTWAEQCLLC Trigger: ACAGAGCAGACACTGCTCAGCCCATGTGAGAAACCACGGCGCTTTGGCGTATACCTGGACTATGAGGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CAA 72 bp | CAGCTTCAGGGCTTCTTGATGTCTCGGACAGATGCCTaGTTCATTCACACGGCTCCCTCGCCCAGGAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLQGFLMSRTDA*FIHTAPSPRSW Trigger: CCAACTCCTGGGCGAGGGAGCCGTGTGAATGAACAAGGCATCTGTCCGAGACATCAAGAAGCCCTGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047145.14 ENSMUST00000138019.2 ENSMUST00000140800.2 |
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| CDS CAA 72 bp | GCCTCTCTAATCCTGCCTGCTCTTCAGCCAGAAACCTaGTTAGCCGCCCAAACTCTGAGGCCACAGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASLILPALQPET*LAAQTLRPQLP Trigger: TGGCAGCTGTGGCCTCAGAGTTTGGGCGGCTAACAAGGTTTCTGGCTGAAGAGCAGGCAGGATTAGAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047145.14 ENSMUST00000131888.8 ENSMUST00000140800.2 |
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| CDS GCA 72 bp | AGAACAGCTTCAGGGCTTCTTGATGTCTCGGACAGATaGCTTGTTCATTCACACGGCTCCCTCGCCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RTASGLLDVSDR*LVHSHGSLAQE Trigger: CTCCTGGGCGAGGGAGCCGTGTGAATGAACAAGGCATCTGTCCGAGACATCAAGAAGCCCTGAAGCTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047145.14 ENSMUST00000138019.2 ENSMUST00000140800.2 |
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| CDS GCA 72 bp | CCAGTGTCAGGTCCACTCTTGCAGCCTGACAAAACATaGGGCTCATTTTCCTCACGATGGCGTCTGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVSGPLLQPDKT*GSFSSRWRLSG Trigger: TCCTGACAGACGCCATCGTGAGGAAAATGAGCCGCATGTTTTGTCAGGCTGCAAGAGTGGACCTGACACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047145.14 |
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| CDS CAA 90 bp | TCTGACTTCATCTGGCTCTTCAGCTCTGTCACCCGCCTCTCCTCCTaGGCCTTCATCTTCTGCACAGCCTCTAGATGCTTCCTAAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SDFIWLFSSVTRLSS*AFIFCTASRCFLSG Trigger: ACCACTTAGGAAGCATCTAGAGGCTGTGCAGAAGATGAAGGCCAAGGAGGAGAGGCGGGTGACAGAGCTGAAGAGCCAGATGAAGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047145.14 ENSMUST00000131888.8 ENSMUST00000140800.2 |
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