Pregenerated sensors for TRIM37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018548Ensembl transcript IDs: ENSMUST00000041282.13, ENSMUST00000139532.2, ENSMUST00000154138.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGCTTTGTaGGCGGAATTCCCTGCACCTGAGCATCAGGTGCAGCTGTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: VREVVAGFSSFPEAL*AEFPAPEHQVQLWP Trigger: AGGCCACAGCTGCACCTGATGCTCAGGTGCAGGGAATTCCGCTCACAAAGCCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR TCA 90 bp | GTTCTCAAGCTTTCCAGAGGCTTTGTGAGCGGAATTCCCTGCACCTaGGCATCAGGTGCAGCTGTGGCCTCAGACACCCATGCACATACA | + |
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Preference number: 1 (lower is better) Translates to: VLKLSRGFVSGIPCT*ASGAAVASDTHAHT Trigger: TGTATGTGCATGGGTGTCTGAGGCCACAGCTGCACCTGATGCTCAGGTGCAGGGAATTCCGCTCACAAAGCCTCTGGAAAGCTTGAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR GCA 90 bp | TCAGTCAAAGACAGAAGCGCACCGATGCTGAGCCAGATCAGATCATaGAATGCCTCCAGGTACTTTCTGGCACTTAGCTGGCTTTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: SVKDRSAPMLSQIRS*NASRYFLALSWLSV Trigger: AACAGAAAGCCAGCTAAGTGCCAGAAAGTACCTGGAGGCATTGCATGATCTGATCTGGCTCAGCATCGGTGCGCTTCTGTCTTTGACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR CCA 90 bp | CATACAACAGCTCAAACACAAACACAGGAGCACAGTAGCAAAATTTaGCAATCATTTGGGGTTTGGACTAATTGGGAATATGCAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: HTTAQTQTQEHSSKI*QSFGVWTNWEYARK Trigger: CTTTCTTGCATATTCCCAATTAGTCCAAACCCCAAATGATTGCCAAATTTTGCTACTGTGCTCCTGTGTTTGTGTTTGAGCTGTTGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGAGCATGCAAGGGCTCTaGGCCTCTTCCCCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: EGKPGLERWWLGSQAFQRSMQGL*ASSPEE Trigger: CTCTTCTGGGGAAGAGGCTCAGAGCCCTTGCATGCT...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAGCCAAGGTGGCCATAGTGCAGCTCCTGCCATCATCGAAACACTGGGTGAAGCGCACCGATGCTaGGCCAGATCAGATCATGCA | + |
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Preference number: 2 (lower is better) Translates to: KHSQGGHSAAPAIIETLGEAHRC*ARSDHA Trigger: TGCATGATCTGATCTGGCTCAGCATCGGTGCGCTTC...ACCCAGTGTTTCGATGATGGCAGGAGCTGCACTATGGCCACCTTGGCTGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGAGCAAGCTATCACCATaGGACACAGAGGAGGCACTA | + |
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Preference number: 2 (lower is better) Translates to: EGKPGLERWWLGSQAFQRSKLSP*DTEEAL Trigger: TAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCT...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAGCCAAGGTGGCCATAGTGCAGCTCCTGCCATCATCGAAACACTGGGTCTTCTGGTCCCACTTTaGATAAACTGCAGAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: KHSQGGHSAAPAIIETLGLLVPL*INCRGT Trigger: TGTGCCTCTGCAGTTTATTCAAAGTGGGACCAGAAG...ACCCAGTGTTTCGATGATGGCAGGAGCTGCACTATGGCCACCTTGGCTGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGTTTCTGGCACTTAGCTaGCTTTCTGTTACAGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: EGKPGLERWWLGSQAFQRFLALS*LSVTVD Trigger: GTCTACTGTAACAGAAAGCCAGCTAAGTGCCAGAAA...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR GCA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGAGCTCAGGAGTAACATaGTTGCCTAGCATGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLGENLIHSVRAQGKQTQSSGVT*LPSMQG Trigger: CCCTTGCATGCTAGGCAAGCATGTTACTCCTGAGCT...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGCAATCATTTGGGGTTTaGACTAATTGGGAATATGCA | + |
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Preference number: 2 (lower is better) Translates to: EGKPGLERWWLGSQAFQRQSFGV*TNWEYA Trigger: TGCATATTCCCAATTAGTCCAAACCCCAAATGATTG...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR GCA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGGATCAGATCATGCAATaGCTCCAGGTACTTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LLGENLIHSVRAQGKQTQDQIMQ*LQVLSG Trigger: GCCAGAAAGTACCTGGAGGCATTGCATGATCTGATC...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGTTAAGTAATCTTACATaGGTCCAAATGACCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: EGKPGLERWWLGSQAFQRLSNLT*VQMTMH Trigger: ATGCATGGTCATTTGGACGCATGTAAGATTACTTAA...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR GCA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGAGCCAGATCAGATCATaGAATGCCTCCAGGTACTTT | + |
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Preference number: 2 (lower is better) Translates to: DGLLGENLIHSVRAQGKQSQIRS*NASRYF Trigger: AAAGTACCTGGAGGCATTGCATGATCTGATCTGGCT...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR CCA 90 bp | GTCAGAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACACATCAGGTGCAGCTGTaGCCTCAGACACCCATGCAC | + |
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Preference number: 2 (lower is better) Translates to: VRIVQKQYAHIHTFNPSTHQVQL*PQTPMH Trigger: GTGCATGGGTGTCTGAGGCCACAGCTGCACCTGATG...TGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR GCA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGATACCAAAAGTAAAATaGCACCTACTTGTTGGACAT | + |
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Preference number: 2 (lower is better) Translates to: LLGENLIHSVRAQGKQTQIPKVK*HLLVGH Trigger: ATGTCCAACAAGTAGGTGGCATTTTACTTTTGGTAT...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR CAA 90 bp | GCAGCACAGTCTCCCCAAATTTGCCAAGTGGGAACAATACACAACTaGTCCATCTCAAAGATTACTGAAGAATACAATCAAGTTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: AAQSPQICQVGTIHN*SISKITEEYNQVVR Trigger: TCTGACAACTTGATTGTATTCTTCAGTAATCTTTGAGATGGACAAGTTGTGTATTGTTCCCACTTGGCAAATTTGGGGAGACTGTGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR TCA 90 bp | GTCAGAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACAATAAGTCTGATTATCTaGCTGCTGACAATTTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: VRIVQKQYAHIHTFNPSTISLII*LLTILS Trigger: GCTCAAAATTGTCAGCAGTCAGATAATCAGACTTAT...TGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTCTGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR TCA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAAAGGAAAAGTGTCCACTaGGCAAAGTCTGTTTATAAG | + |
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Preference number: 2 (lower is better) Translates to: ELFKNNMLTFTPLTPAHERKSVH*AKSVYK Trigger: CTTATAAACAGACTTTGCTCAGTGGACACTTTTCCT...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR GCA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAACCTGCTGGAATTGTGTaGCTTCTAATAGTTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ELFKNNMLTFTPLTPAHEPAGIV*LLIVSE Trigger: TTCTGAAACTATTAGAAGGCACACAATTCCAGCAGG...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR TCA 72 bp | GTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGCTTTGTaGGCGGAATTCCCTGCACCTGAGCATCAGGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: VVAGFSSFPEAL*AEFPAPEHQVQ Trigger: CTGCACCTGATGCTCAGGTGCAGGGAATTCCGCTCACAAAGCCTCTGGAAAGCTTGAGAACCCAGCCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR GCA 72 bp | AAGCAGACACAGCAAGGGATTCTACCATCATGCCTCTaGCCTTCTCCCCACCTGCCTTCAAGCACAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: KQTQQGILPSCL*PSPHLPSSTAK Trigger: CTTGGCTGTGCTTGAAGGCAGGTGGGGAGAAGGGCAGAGGCATGATGGTAGAATCCCTTGCTGTGTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR GCA 72 bp | GACAGAAGCGCACCGATGCTGAGCCAGATCAGATCATaGAATGCCTCCAGGTACTTTCTGGCACTTAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: DRSAPMLSQIRS*NASRYFLALSW Trigger: CCAGCTAAGTGCCAGAAAGTACCTGGAGGCATTGCATGATCTGATCTGGCTCAGCATCGGTGCGCTTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR CCA 72 bp | GGGAAGGAAAAAGAAGGCAAGCCAGGGTTAGAGAGGTaGTGGCTGGGTTCTCAAGCTTTCCAGAGGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: GKEKEGKPGLER*WLGSQAFQRLC Trigger: ACAAAGCCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTCTTTTTCCTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR TCA 72 bp | ACCATGTGTCAGTCAAAGACAGAAGCGCACCGATGCTaGGCCAGATCAGATCATGCAATGCCTCCAGGTACT | + |
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Preference number: 3 (lower is better) Translates to: TMCQSKTEAHRC*ARSDHAMPPGT Trigger: AGTACCTGGAGGCATTGCATGATCTGATCTGGCTCAGCATCGGTGCGCTTCTGTCTTTGACTGACACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR CAA 90 bp | GCAAGCAAGCTATCACCATGGGACACAGAGGAGGCACTAAGTACATGCAGGTGGTTCTTCAACAGTCTCTaGGCCAGCTTTAAGTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: ASKLSPWDTEEALSTCRWFFNSL*ASFKCD Trigger: GTCACACTTAAAGCTGGCCAAGAGACTGTTGAAGAA...CCACCTGCATGTACTTAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR CCA 72 bp | TATGAGTCACAGCATTCAGCAAGCAAGCTATCACCATaGGACACAGAGGAGGCACTAAGTACATGCAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: YESQHSASKLSP*DTEEALSTCRW Trigger: CCACCTGCATGTACTTAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCTTGCTGAATGCTGTGACTCATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR TCA 72 bp | CAATATGCTCACATTCACACCTTTAACCCCAGCACATaGAATGAAAAGGCAGAGGCAGCCTCGTCTACAAAG | + |
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Preference number: 3 (lower is better) Translates to: QYAHIHTFNPST*NEKAEAASSTK Trigger: CTTTGTAGACGAGGCTGCCTCTGCCTTTTCATTTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR CCA 72 bp | TCATGCAATGCCTCCAGGTACTTTCTGGCACTTAGCTaGCTTTCTGTTACAGTAGACAAGCTGCCTTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: SCNASRYFLALS*LSVTVDKLPLL Trigger: TAACAAAGGCAGCTTGTCTACTGTAACAGAAAGCCAGCTAAGTGCCAGAAAGTACCTGGAGGCATTGCATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR-3UTR CAA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAAGCTTCTGGTCCCACTTaGAATAAACTGCAGAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: ELFKNNMLTFTPLTPAHEASGPT*NKLQRH Trigger: GTGCCTCTGCAGTTTATTCAAAGTGGGACCAGAAGC...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| 3UTR TCA 72 bp | CTAACATTGCTGCAGTTACTCAGGAAAAGTGTCCACTaGGCAAAGTCTGTTTATAAGCACTCTTCCTTTTCA | + |
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Preference number: 3 (lower is better) Translates to: LTLLQLLRKSVH*AKSVYKHSSFS Trigger: TGAAAAGGAAGAGTGCTTATAAACAGACTTTGCTCAGTGGACACTTTTCCTGAGTAACTGCAGCAATGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR TCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGGTGGGACAGGTGTGGTaGCAAAGGATGCCATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: EGKPGLERWWLGSQAFQRVGQVW*QRMPWA Trigger: AGCCCATGGCATCCTTTGTCACCACACCTGTCCCAC...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR TCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGCCTTCAGCCAGAACCTaGCAGTCTCCCTTTGAACGG | + |
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Preference number: 4 (lower is better) Translates to: EGKPGLERWWLGSQAFQRPSART*QSPFER Trigger: CCGTTCAAAGGGAGACTGTCAGGTTCTGGCTGAAGG...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR GCA 90 bp | AAGCACAGCCAAGGTGGCCATAGTGCAGCTCCTGCCATCATCGAAACACTGGGTTTCGGAGTGACAGACTaGCTGCTATGGCCCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KHSQGGHSAAPAIIETLGFGVTD*LLWPEL Trigger: CAGCTCGGGCCATAGCAGGCAGTCTGTCACTCCGAA...ACCCAGTGTTTCGATGATGGCAGGAGCTGCACTATGGCCACCTTGGCTGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR GCA 90 bp | GCAAGCAAGCTATCACCATGGGACACAGAGGAGGCACTAAGTACATGCAGGTGGAGGACCTGCAGCAGCTaGATCTTCCATGAGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ASKLSPWDTEEALSTCRWRTCSS*IFHELS Trigger: GGAGAGCTCATGGAAGATGCAGCTGCTGCAGGTCCT...CCACCTGCATGTACTTAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR TCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGAAGCATGTCAGAGCATaGCCCAGCTTTCTTAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: EGKPGLERWWLGSQAFQRKHVRA*PSFLSS Trigger: CGAACTAAGAAAGCTGGGTCATGCTCTGACATGCTT...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR GCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGTCAGCTCGCTCTTACTaGAAGACCGCAACTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: EGKPGLERWWLGSQAFQRSARSY*KTATDV Trigger: AACATCAGTTGCGGTCTTGCAGTAAGAGCGAGCTGA...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR GCA 90 bp | AAGCACAGCCAAGGTGGCCATAGTGCAGCTCCTGCCATCATCGAAACACTGGGTACAGGATCTGCTCTCTaGCGCAAAGTGCTGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KHSQGGHSAAPAIIETLGTGSAL*RKVLKF Trigger: GAACTTCAGCACTTTGCGGCAGAGAGCAGATCCTGT...ACCCAGTGTTTCGATGATGGCAGGAGCTGCACTATGGCCACCTTGGCTGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR CCA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGGCTGTGGCTACTACCTaGAGGACCTGCAGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: DGLLGENLIHSVRAQGKQAVATT*RTCSSC Trigger: GCAGCTGCTGCAGGTCCTCCAGGTAGTAGCCACAGC...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR TCA 90 bp | AAGCACAGCCAAGGTGGCCATAGTGCAGCTCCTGCCATCATCGAAACACTGGGTCCCCAAAGTGCACACTaGTGGCAGATACACTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: KHSQGGHSAAPAIIETLGPQSAH*WQIHFL Trigger: TAAGAAGTGTATCTGCCATCAGTGTGCACTTTGGGG...ACCCAGTGTTTCGATGATGGCAGGAGCTGCACTATGGCCACCTTGGCTGTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR TCA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGCAGCCATCTGTGTTTTaGGCCTTTTCAGCATCTTTA | + |
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Preference number: 4 (lower is better) Translates to: EGKPGLERWWLGSQAFQRQPSVF*AFSASL Trigger: TAAAGATGCTGAAAAGGCTCAAAACACAGATGGCTG...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR CCA 90 bp | AAGCACAGCCAAGGTGGCCATAGTGCAGCTCCTGCCATCATCGAAACACTGGGTGACGTCGACGAAGTTTaGCTACCTCTTCATTCACTT | + |
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Preference number: 4 (lower is better) Translates to: KHSQGGHSAAPAIIETLGDVDEV*LPLHSL Trigger: AAGTGAATGAAGAGGTAGCCAAACTTCGTCGACGTC...ACCCAGTGTTTCGATGATGGCAGGAGCTGCACTATGGCCACCTTGGCTGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR CCA 90 bp | GCAAGCAAGCTATCACCATGGGACACAGAGGAGGCACTAAGTACATGCAGGTGGACTGGTAAAGTCTGGTaGGACAGGTGTGGTGACAAA | + |
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Preference number: 4 (lower is better) Translates to: ASKLSPWDTEEALSTCRWTGKVW*DRCGDK Trigger: TTTGTCACCACACCTGTCCCACCAGACTTTACCAGT...CCACCTGCATGTACTTAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR CCA 90 bp | AGTCAAAGACAGAAGCGCACCGATGCTGAGCCAGATCAGATCATGCAATGCCTCTTGTCTGCATGTCTGTaGAAGCAACACTGCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SQRQKRTDAEPDQIMQCLLSACL*KQHCCP Trigger: AGGGCAGCAGTGTTGCTTCCACAGACATGCAGACAA...GAGGCATTGCATGATCTGATCTGGCTCAGCATCGGTGCGCTTCTGTCTTTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR CCA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGCTCCTTCAGGTAGTGTaGGCTGTACCTCCCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: DGLLGENLIHSVRAQGKQLLQVV*AVPPQL Trigger: AAGCTGGGGAGGTACAGCCCACACTACCTGAAGGAG...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR TCA 90 bp | GCAAGCAAGCTATCACCATGGGACACAGAGGAGGCACTAAGTACATGCAGGTGGGTAAGAGATGTCTTCTaGCCCATGAGAGTTATGAGC | + |
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Preference number: 4 (lower is better) Translates to: ASKLSPWDTEEALSTCRWVRDVF*PMRVMS Trigger: GCTCATAACTCTCATGGGTCAGAAGACATCTCTTAC...CCACCTGCATGTACTTAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS-3UTR TCA 90 bp | GCAAGCAAGCTATCACCATGGGACACAGAGGAGGCACTAAGTACATGCAGGTGGAGATCTCTGGATTTCTaGGTTCGGGACAGCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: ASKLSPWDTEEALSTCRWRSLDF*VRDSSI Trigger: TATTGAGCTGTCCCGAACTCAGAAATCCAGAGATCT...CCACCTGCATGTACTTAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAGACAGAAGCGCACCGATGCTGAGCCAGATCAGATCATGCAATGCCTCCTCCTTCATCAGGGTTaGAGTGGAGATTTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRQKRTDAEPDQIMQCLLLHQG*SGDFQG Trigger: ACCCTGAAAATCTCCACTTCAACCCTGATGAAGGAG...GAGGCATTGCATGATCTGATCTGGCTCAGCATCGGTGCGCTTCTGTCTTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGCCTCCAACAAAGTCCTaGAACTTGAAGAGGCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLGENLIHSVRAQGKQTQPPTKS*NLKRRT Trigger: AGTCCGCCTCTTCAAGTTTCAGGACTTTGTTGGAGG...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGCTGGTGTGTTCTTCCTaGTCCTCGTTCTCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGLLGENLIHSVRAQGKQLVCSS*SSFSVS Trigger: TGACACTGAGAACGAGGAGCAGGAAGAACACACCAG...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | AGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTAATTGGGAATATGCAAGATGTGGGCTGCAACAGTaGAGCAGACGGGCGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKIWQSFGVWTNWEYARCGLQQ*SRRARL Trigger: CAGCCTCGCCCGTCTGCTTCACTGTTGCAGCCCACA...TCTTGCATATTCCCAATTAGTCCAAACCCCAAATGATTGCCAAATTTTGCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGCATTCCTCCCCAAAGTaGACACTGATGGCAGATACA | + |
|
Preference number: 4 (lower is better) Translates to: DGLLGENLIHSVRAQGKQHSSPK*TLMADT Trigger: TGTATCTGCCATCAGTGTGCACTTTGGGGAGGAATG...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACTGTAAACAGGATCTaGTCTCTGCCGCAAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGLLGENLIHSVRAQGKQTVNRI*SLPQSA Trigger: AGCACTTTGCGGCAGAGAGCAGATCCTGTTTACAGT...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGCATCTTCATCTTCCTTaGTCTCTCGTACAGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DGLLGENLIHSVRAQGKQHLHLP*SLVQKR Trigger: GCGCTTCTGTACGAGAGACCAAGGAAGATGAAGATG...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGGTAGTCAGAGCTGCCTaGTCAGCACAGAATAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGENLIHSVRAQGKQTQVVRAA*SAQNRF Trigger: AAACCTATTCTGTGCTGACCAGGCAGCTCTGACTAC...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | GCAAGCAAGCTATCACCATGGGACACAGAGGAGGCACTAAGTACATGCAGGTGGTCATCAGGGTTGAAGTaGAGATTTTCAGGGTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: ASKLSPWDTEEALSTCRWSSGLK*RFSGSI Trigger: AATAGACCCTGAAAATCTCCACTTCAACCCTGATGA...CCACCTGCATGTACTTAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAGACAGAAGCGCACCGATGCTGAGCCAGATCAGATCATGCAATGCCTCATTTCTCCATACAAATaGAACATCGGAAAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQRQKRTDAEPDQIMQCLISPYK*NIGKPQ Trigger: CTGAGGTTTTCCGATGTTTCATTTGTATGGAGAAAT...GAGGCATTGCATGATCTGATCTGGCTCAGCATCGGTGCGCTTCTGTCTTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | AGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTAATTGGGAATATGCAAGAGCAGAAGATCCCCAATaGTGCCGTGTGTCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKIWQSFGVWTNWEYARAEDPQ*CRVSEP Trigger: GGGCTCTGACACACGGCATCATTGGGGATCTTCTGC...TCTTGCATATTCCCAATTAGTCCAAACCCCAAATGATTGCCAAATTTTGCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGATGACTTTCCAAATCTaGCATCTGCATTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DGLLGENLIHSVRAQGKQMTFQI*HLHSFQ Trigger: CTGGAAGGAATGCAGATGGCAGATTTGGAAAGTCAT...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | ACACAAACACAGGAGCACAGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTTTCACTGGTAAAGTCTaGTGGGACAGGTGTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TQTQEHSSKIWQSFGVWTFTGKV*WDRCGD Trigger: GTCACCACACCTGTCCCACCAGACTTTACCAGTGAA...AGTCCAAACCCCAAATGATTGCCAAATTTTGCTACTGTGCTCCTGTGTTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | ACTACTGCACCCTGCTGGAATTGTGTGCCTTCTAATAGTTTCAGAACTGCTATTTTGACATTCTGCTACTaGCACCCACATAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTAPCWNCVPSNSFRTAILTFCY*HPHSCG Trigger: GCCACAGCTATGTGGGTGCCAGTAGCAGAATGTCAA...AATAGCAGTTCTGAAACTATTAGAAGGCACACAATTCCAGCAGGGTGCAGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGGCTTGCTGCTTCCTTTaGTCTTTATCTTTTCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGENLIHSVRAQGKQTQACCFL*SLSFRE Trigger: TTCTCGAAAAGATAAAGATCAAAGGAAGCAGCAAGC...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | ACTACTGCACCCTGCTGGAATTGTGTGCCTTCTAATAGTTTCAGAACTGCTATTTCCCCAGCTTCAGAATaGCTTTCCAAATCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TTAPCWNCVPSNSFRTAISPASE*LSKSAI Trigger: GATGGCAGATTTGGAAAGTCATTCTGAAGCTGGGGA...AATAGCAGTTCTGAAACTATTAGAAGGCACACAATTCCAGCAGGGTGCAGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGTTCTGTGTTGCTTGTTaGTGTAGAACTAGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGENLIHSVRAQGKQTQFCVAC*CRTSRR Trigger: TCTTCTGCTAGTTCTACAGCAACAAGCAACACAGAA...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | ACACAAACACAGGAGCACAGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTTTTCTTCATGTTTGGTaGGACTACACAGCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQTQEHSSKIWQSFGVWTFLHVW*DYTAGE Trigger: CTCTCCAGCTGTGTAGTCTCACCAAACATGAAGAAA...AGTCCAAACCCCAAATGATTGCCAAATTTTGCTACTGTGCTCCTGTGTTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAATGCTATGGCCCGAGCTaGCTTGGGGGAATTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELFKNNMLTFTPLTPAHECYGPS*LGGILL Trigger: AAGAAGAATTCCCCCAAGTCAGCTCGGGCCATAGCA...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | AGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTAATTGGGAATATGCAAGAGCCATGGGCTTTCGGTaGACTTGCTGGAACATCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSKIWQSFGVWTNWEYARAMGFR*TCWNII Trigger: AATGATGTTCCAGCAAGTTCACCGAAAGCCCATGGC...TCTTGCATATTCCCAATTAGTCCAAACCCCAAATGATTGCCAAATTTTGCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | GTCAGAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACAGGAAAACCTCAGCAATaGTCTCCACACTCTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRIVQKQYAHIHTFNPSTGKPQQ*SPHSAH Trigger: ATGAGCAGAGTGTGGAGAGCATTGCTGAGGTTTTCC...TGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTCTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAAAACGTGTGTCCACCATaGATTCCTCCCCAAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELFKNNMLTFTPLTPAHENVCPP*IPPQSA Trigger: TGCACTTTGGGGAGGAATGCATGGTGGACACACGTT...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | AGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTAATTGGGAATATGCAAGAGGATCTCTGAGCTCTTaGAGATCAGCTCGCTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKIWQSFGVWTNWEYARGSLSS*RSARSY Trigger: GTAAGAGCGAGCTGATCTCCAAGAGCTCAGAGATCC...TCTTGCATATTCCCAATTAGTCCAAACCCCAAATGATTGCCAAATTTTGCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | ACTACTGCACCCTGCTGGAATTGTGTGCCTTCTAATAGTTTCAGAACTGCTATTCACGATATTCATACTTaGAAGTTTCAGGCAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTAPCWNCVPSNSFRTAIHDIHT*KFQASQ Trigger: CTGGCTTGCCTGAAACTTCCAAGTATGAATATCGTG...AATAGCAGTTCTGAAACTATTAGAAGGCACACAATTCCAGCAGGGTGCAGTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | ACACAAACACAGGAGCACAGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTGATATAACCAGTCTGTaGAGCTTCCAACTGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQTQEHSSKIWQSFGVWTDITSL*SFQLSN Trigger: ATTACTCAGTTGGAAGCTGCACAGACTGGTTATATC...AGTCCAAACCCCAAATGATTGCCAAATTTTGCTACTGTGCTCCTGTGTTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAAGTGGTGACAGATCTCTaGATTTCTGAGTTCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ELFKNNMLTFTPLTPAHEVVTDL*ISEFGT Trigger: TGTCCCGAACTCAGAAATCCAGAGATCTGTCACCAC...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR GCA 90 bp | GTCAGAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACAAACACGCTCGTCCTTTaGATTTCTTACAGCTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VRIVQKQYAHIHTFNPSTNTLVL*ISYSFY Trigger: GTAGAAGCTGTAAGAAATGCAAAGGACGAGCGTGTT...TGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTCTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | GTCAGAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACACATTTTCCCCAGACATaGTCTCCTCATCAATATCGT | + |
|
Preference number: 4 (lower is better) Translates to: VRIVQKQYAHIHTFNPSTHFPQT*SPHQYR Trigger: ACGATATTGATGAGGAGACCATGTCTGGGGAAAATG...TGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTCTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| 3UTR CAA 72 bp | AAACACAGGAGCACAGTAGCAAAATTTGGCAATCATTaGGGGTTTGGACTAATTGGGAATATGCAAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHRSTVAKFGNH*GFGLIGNMQES Trigger: GCTTTCTTGCATATTCCCAATTAGTCCAAACCCCAAATGATTGCCAAATTTTGCTACTGTGCTCCTGTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAATCATTGCACGACTGGTaGACCATTTCTACACGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ELFKNNMLTFTPLTPAHESLHDW*TISTRY Trigger: ATATCGTGTAGAAATGGTTCACCAGTCGTGCAATGA...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR TCA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAAATGATTATCTGGTGGTaGCAGATCTCTGGATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELFKNNMLTFTPLTPAHEMIIWW*QISGFL Trigger: CAGAAATCCAGAGATCTGTCACCACCAGATAATCAT...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| 3UTR CAA 72 bp | TCTCCCCAAATTTGCCAAGTGGGAACAATACACAACTaGTCCATCTCAAAGATTACTGAAGAATACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPQICQVGTIHN*SISKITEEYNQ Trigger: TTGATTGTATTCTTCAGTAATCTTTGAGATGGACAAGTTGTGTATTGTTCCCACTTGGCAAATTTGGGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CCA 90 bp | GAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATGAAAATTCTTCTTATTTGTaGGGTTTCGTATGTAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELFKNNMLTFTPLTPAHENSSYL*GFVCNS Trigger: GCTGTTACATACGAAACCCCACAAATAAGAAGAATT...TTCATGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS GCA 90 bp | GCCAGGAACGGATCGTTGAACGCGCCCATGCTGGTGTGTTCTTCCTaGTCCTCGTTCTCAGTGTCACATTCAATGTCGCTGTCACTACTC | + |
|
Preference number: 5 (lower is better) Translates to: ARNGSLNAPMLVCSS*SSFSVSHSMSLSLL Trigger: GAGTAGTGACAGCGACATTGAATGTGACACTGAGAACGAGGAGCAGGAAGAACACACCAGCATGGGCGCGTTCAACGATCCGTTCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAAGCCAGGGTTAGAGAGGTGGTGGCTGGGTTCTCAAGCTTTCCAGAGGCCTCCTTCATCAGGGTaGAAGTGGAGATTTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EGKPGLERWWLGSQAFQRPPSSG*KWRFSG Trigger: CCCTGAAAATCTCCACTTCAACCCTGATGAAGGAGG...CCTCTGGAAAGCTTGAGAACCCAGCCACCACCTCTCTAACCCTGGCTTGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS CCA 90 bp | CAGCTCTTCGGAGTGACAGACTGCCTGCTATGGCCCGAGCTGACTTaGGGGAATTCTTCTTATTTGTGGGGTTTCGTATGTAACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLFGVTDCLLWPELT*GNSSYLWGFVCNSQ Trigger: CTGGCTGTTACATACGAAACCCCACAAATAAGAAGAATTCCCCCAAGTCAGCTCGGGCCATAGCAGGCAGTCTGTCACTCCGAAGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS CCA 90 bp | TTTCTCCAGAGTCCACAGCTCTTCGGAGTGACAGACTGCCTGCTATaGCCCGAGCTGACTTGGGGGAATTCTTCTTATTTGTGGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLQSPQLFGVTDCLL*PELTWGNSSYLWGF Trigger: GAAACCCCACAAATAAGAAGAATTCCCCCAAGTCAGCTCGGGCCATAGCAGGCAGTCTGTCACTCCGAAGAGCTGTGGACTCTGGAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 90 bp | TCTGGTGGGACAGGTGTGGTGACAAAGGATGCCATGGGCTTTCGGTaGACTTGCTGGAACATCATTAGGATCTCTGAGCTCTTGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SGGTGVVTKDAMGFR*TCWNIIRISELLEI Trigger: GATCTCCAAGAGCTCAGAGATCCTAATGATGTTCCAGCAAGTTCACCGAAAGCCCATGGCATCCTTTGTCACCACACCTGTCCCACCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS GCA 90 bp | CCACAGGTAGTCAGAGCTGCCTGGTCAGCACAGAATAGGTTTGTCTaGATGTCTGTGGAAGCAACACTGCTGCCCTTTATATCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQVVRAAWSAQNRFV*MSVEATLLPFISDS Trigger: GCTGTCAGATATAAAGGGCAGCAGTGTTGCTTCCACAGACATGCAGACAAACCTATTCTGTGCTGACCAGGCAGCTCTGACTACCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS GCA 90 bp | AACGGCTATTTTCTCCAGAGTCCACAGCTCTTCGGAGTGACAGACTaGCTGCTATGGCCCGAGCTGACTTGGGGGAATTCTTCTTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: NGYFLQSPQLFGVTD*LLWPELTWGNSSYL Trigger: CAAATAAGAAGAATTCCCCCAAGTCAGCTCGGGCCATAGCAGGCAGTCTGTCACTCCGAAGAGCTGTGGACTCTGGAGAAAATAGCCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 90 bp | AGCTGTGGCTACTACCTGGAGGACCTGCAGCAGCTGCATCTTCCATaGGCTCTCCCTCTTCCAGCTCCATACTGTTATATTCTACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SCGYYLEDLQQLHLP*ALPLPAPYCYILHH Trigger: ATGATGTAGAATATAACAGTATGGAGCTGGAAGAGGGAGAGCTCATGGAAGATGCAGCTGCTGCAGGTCCTCCAGGTAGTAGCCACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS GCA 90 bp | TTTTCTTCATGTTTGGTGAGACTACACAGCTGGAGAGTGTCAAGCTaGTGTGTCACTTCTTCCGCCCAACGACAGTTCACCAGTTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: FSSCLVRLHSWRVSS*CVTSSAQRQFTSSR Trigger: ACGGGAACTGGTGAACTGTCGTTGGGCGGAAGAAGTGACACAGCAGCTTGACACTCTCCAGCTGTGTAGTCTCACCAAACATGAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000139532.2 |
||
| CDS TCA 90 bp | TCTTCACATCAGTCTTCATACACCGGACTTCAGCCATCTGTGTTTTaGGCCTTTTCAGCATCTTTAGGTCAGAGGGCACACGCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: SSHQSSYTGLQPSVF*AFSASLGQRAHATS Trigger: CGATGTGGCGTGTGCCCTCTGACCTAAAGATGCTGAAAAGGCTCAAAACACAGATGGCTGAAGTCCGGTGTATGAAGACTGATGTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS CCA 90 bp | TGCCTGCTATGGCCCGAGCTGACTTGGGGGAATTCTTCTTATTTGTaGGGTTTCGTATGTAACAGCCAGCCACTGATGACTTTGCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CLLWPELTWGNSSYL*GFVCNSQPLMTLLE Trigger: TTCTAGCAAAGTCATCAGTGGCTGGCTGTTACATACGAAACCCCACAAATAAGAAGAATTCCCCCAAGTCAGCTCGGGCCATAGCAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | ACACAAACACAGGAGCACAGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTAGGACACTGAGCTCTTaGCTCTGTCAGCCAGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TQTQEHSSKIWQSFGVWTRTLSS*LCQPAP Trigger: AGGCGCTGGCTGACAGAGCAAAGAGCTCAGTGTCCT...AGTCCAAACCCCAAATGATTGCCAAATTTTGCTACTGTGCTCCTGTGTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGCACACGCCACATCGCTaGCTGCTTCCTTTGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DGLLGENLIHSVRAQGKQHTPHR*LLPLIF Trigger: AAAGATCAAAGGAAGCAGCAAGCGATGTGGCGTGTG...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | GCAAGCAAGCTATCACCATGGGACACAGAGGAGGCACTAAGTACATGCAGGTGGTCAGCCATCTGTGTTTaGAGCCTTTTCAGCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASKLSPWDTEEALSTCRWSAICV*SLFSIF Trigger: AAAGATGCTGAAAAGGCTCAAAACACAGATGGCTGA...CCACCTGCATGTACTTAGTGCCTCCTCTGTGTCCCATGGTGATAGCTTGCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGCAGCCACTGATGACTTaGCTAGAAGCTCCATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGENLIHSVRAQGKQTQQPLMT*LEAPFP Trigger: TGGGAATGGAGCTTCTAGCAAAGTCATCAGTGGCTG...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 90 bp | GTCAGCCAGCGCCTAATACAGCTGAAACAACAGAGCTTGGAGCAATaGGGACACAGTCGAGCATCCCGCAATTTCTCCATACAAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSQRLIQLKQQSLEQ*GHSRASRNFSIQMK Trigger: TTTCATTTGTATGGAGAAATTGCGGGATGCTCGACTGTGTCCTCATTGCTCCAAGCTCTGTTGTTTCAGCTGTATTAGGCGCTGGCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS CCA 90 bp | GCTTTCGGTGAACTTGCTGGAACATCATTAGGATCTCTGAGCTCTTaGAGATCAGCTCGCTCTTACTGCAAGACCGCAACTGATGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AFGELAGTSLGSLSS*RSARSYCKTATDVL Trigger: TAGAACATCAGTTGCGGTCTTGCAGTAAGAGCGAGCTGATCTCCAAGAGCTCAGAGATCCTAATGATGTTCCAGCAAGTTCACCGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | TTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACACAGTCATCTTCATCTTCCTaGGTCTCTCGTACAGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLGENLIHSVRAQGKQTQSSSSS*VSRTEA Trigger: CGCTTCTGTACGAGAGACCAAGGAAGATGAAGATGA...CTGTGTCTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 90 bp | AGCAATGAGGACACAGTCGAGCATCCCGCAATTTCTCCATACAAATaGAACATCGGAAAACCTCAGCAATGCTCTCCACACTCTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SNEDTVEHPAISPYK*NIGKPQQCSPHSAH Trigger: ATGAGCAGAGTGTGGAGAGCATTGCTGAGGTTTTCCGATGTTTCATTTGTATGGAGAAATTGCGGGATGCTCGACTGTGTCCTCATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000139532.2 |
||
| CDS TCA 90 bp | TTGCTTGTTGCTGTAGAACTAGCAGAAGAGCTGCTGCCATCAAGGTaGTTCACTTCATCTTCTCCAACAAGATCCAGGTCCAGATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLVAVELAEELLPSR*FTSSSPTRSRSRSP Trigger: TGGAGATCTGGACCTGGATCTTGTTGGAGAAGATGAAGTGAATCACCTTGATGGCAGCAGCTCTTCTGCTAGTTCTACAGCAACAAGCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 90 bp | ATCTTTAGGTCAGAGGGCACACGCCACATCGCTTGCTGCTTCCTTTaGTCTTTATCTTTTCGAGAATATGATGCTGTGGGCTGCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: IFRSEGTRHIACCFL*SLSFREYDAVGCNS Trigger: ACTGTTGCAGCCCACAGCATCATATTCTCGAAAAGATAAAGATCAAAGGAAGCAGCAAGCGATGTGGCGTGTGCCCTCTGACCTAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS TCA 90 bp | GGAGTGGAGCACCTAATACAGCTGAAACAACAGAGCTTGGAGCAATaGGGACACAGTCGAGCATCCCGCAATTTCTCCATACAAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVEHLIQLKQQSLEQ*GHSRASRNFSIQMK Trigger: TTTCATTTGTATGGAGAAATTGCGGGATGCTCGACTGTGTCCTCATTGCTCCAAGCTCTGTTGTTTCAGCTGTATTAGGTGCTCCACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139532.2 |
||
| CDS-3UTR CAA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGGAACACGCTCGTCCTTaGCATTTCTTACAGCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: DGLLGENLIHSVRAQGKQEHARP*HFLQLL Trigger: TAGAAGCTGTAAGAAATGCAAAGGACGAGCGTGTTC...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGCAACAGCTCCGTTTCTaGAGTAAGAGATGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGLLGENLIHSVRAQGKQQQLRF*SKRCLL Trigger: CAGAAGACATCTCTTACTCAAGAAACGGAGCTGTTG...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 90 bp | GGTTTAAACGTGTGTCCACCATGCATTCCTCCCCAAAGTGCACACTaGTGGCAGATACACTTCTTACAAGTCCAGCAAAACACACTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLNVCPPCIPPQSAH*WQIHFLQVQQNTLS Trigger: ACTTAGTGTGTTTTGCTGGACTTGTAAGAAGTGTATCTGCCATCAGTGTGCACTTTGGGGAGGAATGCATGGTGGACACACGTTTAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000139532.2 |
||
| CDS-3UTR CAA 90 bp | ACTACTGCACCCTGCTGGAATTGTGTGCCTTCTAATAGTTTCAGAACTGCTATTAGGATCTCTGAGCTCTaGGAGATCAGCTCGCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TTAPCWNCVPSNSFRTAIRISEL*EISSLL Trigger: TAAGAGCGAGCTGATCTCCAAGAGCTCAGAGATCCT...AATAGCAGTTCTGAAACTATTAGAAGGCACACAATTCCAGCAGGGTGCAGTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS GCA 90 bp | AGACATGGTCTCCTCATCAATATCGTTTTCTTCTGTGTTGCTTGTTaGTGTAGAACTAGCAGAAGAGCTGCTGCCATCAAGGTGATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RHGLLINIVFFCVAC*CRTSRRAAAIKVIH Trigger: GTGAATCACCTTGATGGCAGCAGCTCTTCTGCTAGTTCTACAGCAACAAGCAACACAGAAGAAAACGATATTGATGAGGAGACCATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | ACACAAACACAGGAGCACAGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTAGACGTCGACGAAGTTaGGCTACCTCTTCATTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TQTQEHSSKIWQSFGVWTRRRRS*ATSSFT Trigger: AGTGAATGAAGAGGTAGCCAAACTTCGTCGACGTCT...AGTCCAAACCCCAAATGATTGCCAAATTTTGCTACTGTGCTCCTGTGTTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGACAGTAGGTAAACCATaGAAAACTGCAACAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: DGLLGENLIHSVRAQGKQTVGKP*KTATTT Trigger: TGTGGTTGTTGCAGTTTTCAATGGTTTACCTACTGT...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | GATGGATTATTAGGGGAGAATCTGATACACAGTGTAAGAGCCCAGGGCAAGCAGAATCACTGTATCATTTaGTCGGTTCAAGTATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DGLLGENLIHSVRAQGKQNHCII*SVQVSF Trigger: GAAGGATACTTGAACCGACAAAATGATACAGTGATT...CTGCTTGCCCTGGGCTCTTACACTGTGTATCAGATTCTCCCCTAATAATCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS GCA 90 bp | GGCTACCTCTTCATTCACTTTAGTGACATGTTGTTCATAAATTTCTaGCAAAGGTTTAAACGTGTGTCCACCATGCATTCCTCCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GYLFIHFSDMLFINF*QRFKRVSTMHSSPK Trigger: CTTTGGGGAGGAATGCATGGTGGACACACGTTTAAACCTTTGGCAGAAATTTATGAACAACATGTCACTAAAGTGAATGAAGAGGTAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000139532.2 |
||
| CDS-3UTR CAA 90 bp | ACTACTGCACCCTGCTGGAATTGTGTGCCTTCTAATAGTTTCAGAACTGCTATTCGCTTGCTGCTTCCTTaGATCTTTATCTTTTCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTAPCWNCVPSNSFRTAIRLLLP*IFIFSR Trigger: TCTCGAAAAGATAAAGATCAAAGGAAGCAGCAAGCG...AATAGCAGTTCTGAAACTATTAGAAGGCACACAATTCCAGCAGGGTGCAGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | ACACAAACACAGGAGCACAGTAGCAAAATTTGGCAATCATTTGGGGTTTGGACTATAAATGTGTTCTTCTaGACATTCTGCTACTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQTQEHSSKIWQSFGVWTINVFF*TFCYWH Trigger: GTGCCAGTAGCAGAATGTCAAGAAGAACACATTTAT...AGTCCAAACCCCAAATGATTGCCAAATTTTGCTACTGTGCTCCTGTGTTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS-3UTR CAA 90 bp | GTCAGAATTGTTCAAAAACAATATGCTCACATTCACACCTTTAACCCCAGCACATCAAGTATCCTTCGTTaGCAAGTAAATCCAAACGAA | + |
|
Preference number: 5 (lower is better) Translates to: VRIVQKQYAHIHTFNPSTSSILR*QVNPNE Trigger: TTCGTTTGGATTTACTTGCAAACGAAGGATACTTGA...TGTGCTGGGGTTAAAGGTGTGAATGTGAGCATATTGTTTTTGAACAATTCTGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS CCA 72 bp | CTTCCTCAGGGGCGGCTGAGGCTCCTTCAGGTAGTGTaGGCTGTACCTCCCCAGCTTCAGAATGACTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPQGRLRLLQVV*AVPPQLQNDFP Trigger: TGGAAAGTCATTCTGAAGCTGGGGAGGTACAGCCCACACTACCTGAAGGAGCCTCAGCCGCCCCTGAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS GCA 72 bp | GGATCGTTGAACGCGCCCATGCTGGTGTGTTCTTCCTaGTCCTCGTTCTCAGTGTCACATTCAATGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSLNAPMLVCSS*SSFSVSHSMSL Trigger: CAGCGACATTGAATGTGACACTGAGAACGAGGAGCAGGAAGAACACACCAGCATGGGCGCGTTCAACGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS CCA 72 bp | TCTTCCGCCCAACGACAGTTCACCAGTTCCCGTAGCTaGAGTGGAGCACCTAATACAGCTGAAACAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSAQRQFTSSRS*SGAPNTAETTE Trigger: CTCTGTTGTTTCAGCTGTATTAGGTGCTCCACTCCAGCTACGGGAACTGGTGAACTGTCGTTGGGCGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139532.2 |
||
| CDS CAA 72 bp | CGGAGTGACAGACTGCCTGCTATGGCCCGAGCTGACTaGGGGGAATTCTTCTTATTTGTGGGGTTTCGTATG | + |
|
Preference number: 6 (lower is better) Translates to: RSDRLPAMARAD*GEFFLFVGFRM Trigger: CATACGAAACCCCACAAATAAGAAGAATTCCCCCAAGTCAGCTCGGGCCATAGCAGGCAGTCTGTCACTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS GCA 72 bp | GGTAAAGTCTGGTGGGACAGGTGTGGTGACAAAGGATaGCATGGGCTTTCGGTGAACTTGCTGGAACATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GKVWWDRCGDKG*HGLSVNLLEHH Trigger: ATGATGTTCCAGCAAGTTCACCGAAAGCCCATGGCATCCTTTGTCACCACACCTGTCCCACCAGACTTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS CCA 72 bp | GGAGTGACAGACTGCCTGCTATGGCCCGAGCTGACTTaGGGGAATTCTTCTTATTTGTGGGGTTTCGTATGT | + |
|
Preference number: 6 (lower is better) Translates to: GVTDCLLWPELT*GNSSYLWGFVC Trigger: ACATACGAAACCCCACAAATAAGAAGAATTCCCCCAAGTCAGCTCGGGCCATAGCAGGCAGTCTGTCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS CAA 90 bp | GACTGCCTGCTATGGCCCGAGCTGACTTGGGGGAATTCTTCTTATTaGTGGGGTTTCGTATGTAACAGCCAGCCACTGATGACTTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: DCLLWPELTWGNSSY*WGFVCNSQPLMTLL Trigger: TAGCAAAGTCATCAGTGGCTGGCTGTTACATACGAAACCCCACAAATAAGAAGAATTCCCCCAAGTCAGCTCGGGCCATAGCAGGCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 72 bp | ACAGGTGTGGTGACAAAGGATGCCATGGGCTTTCGGTaGACTTGCTGGAACATCATTAGGATCTCTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGVVTKDAMGFR*TCWNIIRISEL Trigger: GAGCTCAGAGATCCTAATGATGTTCCAGCAAGTTCACCGAAAGCCCATGGCATCCTTTGTCACCACACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 72 bp | TCAGGTAGTGTGGGCTGTACCTCCCCAGCTTCAGAATaGCTTTCCAAATCTGCCATCTGCATTCCTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGSVGCTSPASE*LSKSAICIPSR Trigger: TCTGGAAGGAATGCAGATGGCAGATTTGGAAAGTCATTCTGAAGCTGGGGAGGTACAGCCCACACTACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS GCA 72 bp | GGATCTCTGAGCTCTTGGAGATCAGCTCGCTCTTACTaGAAGACCGCAACTGATGTTCTACCTCCTGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSLSSWRSARSY*KTATDVLPPEV Trigger: TACTTCAGGAGGTAGAACATCAGTTGCGGTCTTGCAGTAAGAGCGAGCTGATCTCCAAGAGCTCAGAGATCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS GCA 72 bp | GTCAGAGCTGCCTGGTCAGCACAGAATAGGTTTGTCTaGATGTCTGTGGAAGCAACACTGCTGCCCTTTATA | + |
|
Preference number: 6 (lower is better) Translates to: VRAAWSAQNRFV*MSVEATLLPFI Trigger: TATAAAGGGCAGCAGTGTTGCTTCCACAGACATGCAGACAAACCTATTCTGTGCTGACCAGGCAGCTCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS GCA 72 bp | CTGTACCTCCCCAGCTTCAGAATGACTTTCCAAATCTaGCATCTGCATTCCTTCCAGACGACCTCCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LYLPSFRMTFQI*HLHSFQTTSFC Trigger: GCAAAAGGAGGTCGTCTGGAAGGAATGCAGATGGCAGATTTGGAAAGTCATTCTGAAGCTGGGGAGGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS CCA 72 bp | TGGCCCGAGCTGACTTGGGGGAATTCTTCTTATTTGTaGGGTTTCGTATGTAACAGCCAGCCACTGATGACT | + |
|
Preference number: 6 (lower is better) Translates to: WPELTWGNSSYL*GFVCNSQPLMT Trigger: AGTCATCAGTGGCTGGCTGTTACATACGAAACCCCACAAATAAGAAGAATTCCCCCAAGTCAGCTCGGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS CAA 72 bp | TCAGAATCCAAGGCTTTGCACTGTCGGTCTTCACTTTaGGGCAGAAGATCCCCAATGATGCCGTGTGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SESKALHCRSSL*GRRSPMMPCVR Trigger: TCTGACACACGGCATCATTGGGGATCTTCTGCCCAAAAGTGAAGACCGACAGTGCAAAGCCTTGGATTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS CAA 90 bp | GTCTTCACATCAGTCTTCATACACCGGACTTCAGCCATCTGTGTTTaGAGCCTTTTCAGCATCTTTAGGTCAGAGGGCACACGCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: VFTSVFIHRTSAICV*SLFSIFRSEGTRHI Trigger: GATGTGGCGTGTGCCCTCTGACCTAAAGATGCTGAAAAGGCTCAAAACACAGATGGCTGAAGTCCGGTGTATGAAGACTGATGTGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS TCA 72 bp | CGCCTAATACAGCTGAAACAACAGAGCTTGGAGCAATaGGGACACAGTCGAGCATCCCGCAATTTCTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: RLIQLKQQSLEQ*GHSRASRNFSI Trigger: TATGGAGAAATTGCGGGATGCTCGACTGTGTCCTCATTGCTCCAAGCTCTGTTGTTTCAGCTGTATTAGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS TCA 72 bp | GTGTGTCCACCATGCATTCCTCCCCAAAGTGCACACTaGTGGCAGATACACTTCTTACAAGTCCAGCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VCPPCIPPQSAH*WQIHFLQVQQN Trigger: GTTTTGCTGGACTTGTAAGAAGTGTATCTGCCATCAGTGTGCACTTTGGGGAGGAATGCATGGTGGACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000139532.2 |
||
| CDS TCA 72 bp | TCAGAGGGCACACGCCACATCGCTTGCTGCTTCCTTTaGTCTTTATCTTTTCGAGAATATGATGCTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SEGTRHIACCFL*SLSFREYDAVG Trigger: GCCCACAGCATCATATTCTCGAAAAGATAAAGATCAAAGGAAGCAGCAAGCGATGTGGCGTGTGCCCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS TCA 72 bp | CAGTCTTCATACACCGGACTTCAGCCATCTGTGTTTTaGGCCTTTTCAGCATCTTTAGGTCAGAGGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: QSSYTGLQPSVF*AFSASLGQRAH Trigger: GTGTGCCCTCTGACCTAAAGATGCTGAAAAGGCTCAAAACACAGATGGCTGAAGTCCGGTGTATGAAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS CCA 72 bp | ATCATAGGATGGTACCAATTCACTGGTAAAGTCTGGTaGGACAGGTGTGGTGACAAAGGATGCCATGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: IIGWYQFTGKVW*DRCGDKGCHGL Trigger: AAGCCCATGGCATCCTTTGTCACCACACCTGTCCCACCAGACTTTACCAGTGAATTGGTACCATCCTATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
||
| CDS CAA 72 bp | AAAACTGCAACAACCACAGCGTCAGAATCCAAGGCTTaGCACTGTCGGTCTTCACTTTTGGGCAGAAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: KTATTTASESKA*HCRSSLLGRRS Trigger: GGATCTTCTGCCCAAAAGTGAAGACCGACAGTGCAAAGCCTTGGATTCTGACGCTGTGGTTGTTGCAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
||
| CDS CAA 90 bp | TTCCCGAGGAGCGGTTTCGTATGTAACAGCCAGCCACTGATGACTTaGCTAGAAGCTCCATTCCCAAATCCTGTAATCTACCAGAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FPRSGFVCNSQPLMT*LEAPFPNPVIYQSF Trigger: AAAACTCTGGTAGATTACAGGATTTGGGAATGGAGCTTCTAGCAAAGTCATCAGTGGCTGGCTGTTACATACGAAACCGCTCCTCGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154138.2 |
||
| CDS TCA 72 bp | GACACAGTCGAGCATCCCGCAATTTCTCCATACAAATaGAACATCGGAAAACCTCAGCAATGCTCTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: DTVEHPAISPYK*NIGKPQQCSPH Trigger: GTGTGGAGAGCATTGCTGAGGTTTTCCGATGTTTCATTTGTATGGAGAAATTGCGGGATGCTCGACTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000139532.2 |
||
| CDS TCA 72 bp | CACCTAATACAGCTGAAACAACAGAGCTTGGAGCAATaGGGACACAGTCGAGCATCCCGCAATTTCTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: HLIQLKQQSLEQ*GHSRASRNFSI Trigger: TATGGAGAAATTGCGGGATGCTCGACTGTGTCCTCATTGCTCCAAGCTCTGTTGTTTCAGCTGTATTAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139532.2 |
||
| CDS CAA 72 bp | TCAGTCTTCATACACCGGACTTCAGCCATCTGTGTTTaGAGCCTTTTCAGCATCTTTAGGTCAGAGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: SVFIHRTSAICV*SLFSIFRSEGT Trigger: TGTGCCCTCTGACCTAAAGATGCTGAAAAGGCTCAAAACACAGATGGCTGAAGTCCGGTGTATGAAGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
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| CDS CAA 90 bp | CCCAAGGTGACCATTTTCCTTCTCTTCTCAACAGTAGGTAAACCATaGAAAACTGCAACAACCACAGCGTCAGAATCCAAGGCTTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: PKVTIFLLFSTVGKP*KTATTTASESKALH Trigger: GTGCAAAGCCTTGGATTCTGACGCTGTGGTTGTTGCAGTTTTCAATGGTTTACCTACTGTTGAGAAGAGAAGGAAAATGGTCACCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000154138.2 |
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| CDS CAA 72 bp | TGGGGTTTCGTATGTAACAGCCAGCCACTGATGACTTaGCTAGAAGCTCCATTCCCAAATCCTGTAATCTAC | + |
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Preference number: 6 (lower is better) Translates to: WGFVCNSQPLMT*LEAPFPNPVIY Trigger: GTAGATTACAGGATTTGGGAATGGAGCTTCTAGCAAAGTCATCAGTGGCTGGCTGTTACATACGAAACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS CAA 72 bp | AGCGGTTTCGTATGTAACAGCCAGCCACTGATGACTTaGCTAGAAGCTCCATTCCCAAATCCTGTAATCTAC | + |
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Preference number: 6 (lower is better) Translates to: SGFVCNSQPLMT*LEAPFPNPVIY Trigger: GTAGATTACAGGATTTGGGAATGGAGCTTCTAGCAAAGTCATCAGTGGCTGGCTGTTACATACGAAACCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154138.2 |
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| CDS CAA 72 bp | ACTAAGCTGATCAGCTCCATGAGACGTCGACGAAGTTaGGCTACCTCTTCATTCACTTTAGTGACATGTTGT | + |
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Preference number: 6 (lower is better) Translates to: TKLISSMRRRRS*ATSSFTLVTCC Trigger: ACAACATGTCACTAAAGTGAATGAAGAGGTAGCCAAACTTCGTCGACGTCTCATGGAGCTGATCAGCTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000139532.2 |
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| CDS CAA 90 bp | TCTTATTTGTGGGGTTTCGTATGTAACAGCCAGCCACTGATGACTTaGCTAGAAGCTCCATTCCCAAATCCTGTAATCTACCAGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SYLWGFVCNSQPLMT*LEAPFPNPVIYQSF Trigger: AAAACTCTGGTAGATTACAGGATTTGGGAATGGAGCTTCTAGCAAAGTCATCAGTGGCTGGCTGTTACATACGAAACCCCACAAATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041282.13 |
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| CDS GCA 72 bp | TTCATTCACTTTAGTGACATGTTGTTCATAAATTTCTaGCAAAGGTTTAAACGTGTGTCCACCATGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: FIHFSDMLFINF*QRFKRVSTMHS Trigger: GGAATGCATGGTGGACACACGTTTAAACCTTTGGCAGAAATTTATGAACAACATGTCACTAAAGTGAATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041282.13 ENSMUST00000139532.2 |
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