Pregenerated sensors for TRIM34A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056144Ensembl transcript IDs: ENSMUST00000060315.12, ENSMUST00000106848.8, ENSMUST00000106849.9
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCACATCCAAGCATGACAGAAGGGAGACCATGGGAAGAGATGCCTaGACAGCACAGGTCCATACACAAGGTAAGCATCAAGGCCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: TTSKHDRRETMGRDA*TAQVHTQGKHQGQK Trigger: CTTCTGGCCTTGATGCTTACCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCATGCTTGGATGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| 3UTR CCA 90 bp | ATGATGCCAGATACACCACATCCAAGCATGACAGAAGGGAGACCATaGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: MMPDTPHPSMTEGRP*EEMPEQHRSIHKVS Trigger: GCTTACCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGGCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| 3UTR CCA 90 bp | CATAGTGTTAAAAATCCATTAGTTGTGGTCTGGAGTCAGTTCTTATaGATTGTCTTAAACAACAAGGATGAGTTACTGGCTAATAGACTT | + |
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Preference number: 1 (lower is better) Translates to: HSVKNPLVVVWSQFL*IVLNNKDELLANRL Trigger: AAGTCTATTAGCCAGTAACTCATCCTTGTTGTTTAAGACAATCCATAAGAACTGACTCCAGACCACAACTAATGGATTTTTAACACTATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| 3UTR-3UTR TCA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTCACCACATCCAAGCATaGCAGAAGGGAGACCATGGG | + |
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Preference number: 2 (lower is better) Translates to: KTKGNMEGRGHGYYPDLAHHIQA*QKGDHG Trigger: CCCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTG...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTACACCACATCCAAGCATaGCAGAAGGGAGACCATGGG | + |
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Preference number: 2 (lower is better) Translates to: FKTKGNMEGRGHGYYPDLHHIQA*QKGDHG Trigger: CCCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTG...TAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| 3UTR-3UTR GCA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTGACCATGGGAAGAGATaGCTGAACAGCACAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KTKGNMEGRGHGYYPDLADHGKR*LNSTGP Trigger: TGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTC...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| 3UTR-3UTR TCA 90 bp | GACATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACATGGGAAGAGATGCCTaGACAGCACAGGTCCATACA | + |
|
Preference number: 2 (lower is better) Translates to: DMLHMRLYIWNQTCKEDDMGRDA*TAQVHT Trigger: TGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCAT...GTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAAGCATCTCTTCTACATaGTGCCAGATACACCACATC | + |
|
Preference number: 2 (lower is better) Translates to: FKTKGNMEGRGHGYYPDLSISST*CQIHHI Trigger: GATGTGGTGTATCTGGCATCATGTAGAAGAGATGCT...TAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACTAATGGGAAGAGATGCCTaGACAGCACAGGTCCATACA | + |
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Preference number: 2 (lower is better) Translates to: HAPHEIIHMESNLQGRRLMGRDA*TAQVHT Trigger: TGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCAT...TAGTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCAGATGGGAAGAGATGCCTaGACAGCACAGGTCCATACA | + |
|
Preference number: 2 (lower is better) Translates to: WLIDFVNFLQDKGKYGRQMGRDA*TAQVHT Trigger: TGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCAT...CTGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| 3UTR CCA 72 bp | GATACACCACATCCAAGCATGACAGAAGGGAGACCATaGGAAGAGATGCCTGAACAGCACAGGTCCATACAC | + |
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Preference number: 3 (lower is better) Translates to: DTPHPSMTEGRP*EEMPEQHRSIH Trigger: GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR GCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGAGCCAGCTCAGCCTCTaGCCCCGCCAGGCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRSQLSL*PRQAVQ Trigger: CTGGACAGCCTGGCGGGGGCAGAGGCTGAGCTGGCT...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR GCA 90 bp | ATGACAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAGCCAGCTCAGCCTCTaGCCCCGCCAGGCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MTEGRPWEEMPEQHRSIHSQLSL*PRQAVQ Trigger: CTGGACAGCCTGGCGGGGGCAGAGGCTGAGCTGGCT...GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGCCCGATGGAGAGGGGTaGCCACAAAGGGGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRPDGEG*PQRGSE Trigger: TTCTGAACCCCTTTGTGGCCACCCCTCTCCATCGGG...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | ATGACAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACGAGGACACAGGGTCATaGGGGCTGGACAGTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MTEGRPWEEMPEQHRSIHEDTGS*GLDSPK Trigger: CTTGGGACTGTCCAGCCCCCATGACCCTGTGTCCTC...GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | GAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGTATCTCCTGACATTCCCTaGCTGCTTCCTCCCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: EGRPWEEMPEQHRSIHKVSPDIP*LLPPRG Trigger: TCCTCTGGGAGGAAGCAGTCAGGGAATGTCAGGAGA...TACCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGCTCTCAGTCTGGACCTaGCACTTCCAGGAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRLSVWT*HFQESL Trigger: CAGACTTTCCTGGAAGTGCCAGGTCCAGACTGAGAG...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGTTCTGGAGATTCTCCTaGCATTCCCTGACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRFWRFS*HSLTAS Trigger: GGAAGCAGTCAGGGAATGTCAGGAGAATCTCCAGAA...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR GCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGCTGACATTCCCTGACTaGTTCCTCCCAGAGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRLTFPD*FLPEEC Trigger: ACATTCCTCTGGGAGGAAGCAGTCAGGGAATGTCAG...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGGGCAGACAGGGCAAGTaGTCTTCTCCTGTATATTCG | + |
|
Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRGRQGK*SSPVYS Trigger: CGAATATACAGGAGAAGACCACTTGCCCTGTCTGCC...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR GCA 90 bp | GAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGTACTGACATTCCCTGACTaGTTCCTCCCAGAGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: EGRPWEEMPEQHRSIHKVLTFPD*FLPEEC Trigger: ACATTCCTCTGGGAGGAAGCAGTCAGGGAATGTCAG...TACCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR GCA 90 bp | CTGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCAAGCCAGCTCAGCCTCTaGCCCCGCCAGGCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LANRLCQLSSRQREIWKASQLSL*PRQAVQ Trigger: CTGGACAGCCTGGCGGGGGCAGAGGCTGAGCTGGCT...TGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | GAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGTAGGCAGACAGGGCAAGTaGTCTTCTCCTGTATATTCG | + |
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Preference number: 4 (lower is better) Translates to: EGRPWEEMPEQHRSIHKVGRQGK*SSPVYS Trigger: CGAATATACAGGAGAAGACCACTTGCCCTGTCTGCC...TACCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGCTAGACTCAGGGCTTTaGTCAAAAGCTCTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRLDSGL*SKALGR Trigger: TCTGCCAAGAGCTTTTGACCAAAGCCCTGAGTCTAG...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGAGGAGCTTCTCTCCATaGTGTACACAGAGATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRRSFSP*CTQRSL Trigger: GAGAGATCTCTGTGTACACCATGGAGAGAAGCTCCT...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | ATGACAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACCTAGACTCAGGGCTTTaGTCAAAAGCTCTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: MTEGRPWEEMPEQHRSIHLDSGL*SKALGR Trigger: TCTGCCAAGAGCTTTTGACCAAAGCCCTGAGTCTAG...GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | GTAAAAGGTAAGCATCTCTTCTACATGATGCCAGATACACCACATCCAAGCATGGAGGACACAGGGTCATaGGGGCTGGACAGTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VKGKHLFYMMPDTPHPSMEDTGS*GLDSPK Trigger: CTTGGGACTGTCCAGCCCCCATGACCCTGTGTCCTC...CATGCTTGGATGTGGTGTATCTGGCATCATGTAGAAGAGATGCTTACCTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | TTCAAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTATCTCCTGACATTCCCTaGCTGCTTCCTCCCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FKTKGNMEGRGHGYYPDLSPDIP*LLPPRG Trigger: TCCTCTGGGAGGAAGCAGTCAGGGAATGTCAGGAGA...TAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGTTCAGTGTCCAGATCTaGCTCCATTTCAAAATACCG | + |
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Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRFSVQI*LHFKIP Trigger: CGGTATTTTGAAATGGAGTCAGATCTGGACACTGAA...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | ATGACAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACCCAGTAATGTTTTCCTaGGGAGAAACATTTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: MTEGRPWEEMPEQHRSIHPVMFS*GETFGA Trigger: GGCTCCAAATGTTTCTCCTCAGGAAAACATTACTGG...GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR GCA 90 bp | GAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGTAATACCGCTCATATCCTaGAGCAACTCTGTATCTGAC | + |
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Preference number: 4 (lower is better) Translates to: EGRPWEEMPEQHRSIHKVIPLIS*SNSVSD Trigger: GTCAGATACAGAGTTGCTGCAGGATATGAGCGGTAT...TACCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | GTAAAAGGTAAGCATCTCTTCTACATGATGCCAGATACACCACATCCAAGCATGCCCGATGGAGAGGGGTaGCCACAAAGGGGTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VKGKHLFYMMPDTPHPSMPDGEG*PQRGSE Trigger: TTCTGAACCCCTTTGTGGCCACCCCTCTCCATCGGG...CATGCTTGGATGTGGTGTATCTGGCATCATGTAGAAGAGATGCTTACCTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTTTCTGGAGATTCTCCTaGCATTCCCTGACTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KTKGNMEGRGHGYYPDLAFWRFS*HSLTAS Trigger: GGAAGCAGTCAGGGAATGTCAGGAGAATCTCCAGAA...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGAAAGTCTGTCTTCTTTaGTGTCAGCTTCCAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRKVCLL*CQLPMS Trigger: AGACATTGGAAGCTGACATCAAAGAAGACAGACTTT...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | GAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGTATTCAGTGTCCAGATCTaGCTCCATTTCAAAATACCG | + |
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Preference number: 4 (lower is better) Translates to: EGRPWEEMPEQHRSIHKVFSVQI*LHFKIP Trigger: CGGTATTTTGAAATGGAGTCAGATCTGGACACTGAA...TACCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | TTCAAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTACTCTCAGTCTGGACCTaGCACTTCCAGGAAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: FKTKGNMEGRGHGYYPDLLSVWT*HFQESL Trigger: CAGACTTTCCTGGAAGTGCCAGGTCCAGACTGAGAG...TAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CCA 90 bp | TGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCAGGAGGACACAGGGTCATaGGGGCTGGACAGTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: WLIDFVNFLQDKGKYGRQEDTGS*GLDSPK Trigger: CTTGGGACTGTCCAGCCCCCATGACCCTGTGTCCTC...CTGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | ATGACAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAAGTCTGTCTTCTTTaGTGTCAGCTTCCAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: MTEGRPWEEMPEQHRSIHKVCLL*CQLPMS Trigger: AGACATTGGAAGCTGACATCAAAGAAGACAGACTTT...GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR TCA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTCCAGTAATGTTTTCCTaGGGAGAAACATTTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: KTKGNMEGRGHGYYPDLAPVMFS*GETFGA Trigger: GGCTCCAAATGTTTCTCCTCAGGAAAACATTACTGG...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR GCA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTCTGTCCAGTATCATCTaGTCCTCTTCTCTGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KTKGNMEGRGHGYYPDLALSSII*SSSLSL Trigger: AAGACTCAGAGAAGAGGAGCAGATGATACTGGACAG...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR GCA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTATACCGCTCATATCCTaGAGCAACTCTGTATCTGAC | + |
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Preference number: 4 (lower is better) Translates to: KTKGNMEGRGHGYYPDLAIPLIS*SNSVSD Trigger: GTCAGATACAGAGTTGCTGCAGGATATGAGCGGTAT...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | TTCTACATGATGCCAGATACACCACATCCAAGCATGACAGAAGGGAGACCATGGCTGAGGAGAAACATTTaGAGCCCAAGATACCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FYMMPDTPHPSMTEGRPWLRRNI*SPRYRY Trigger: ATAACGGTATCTTGGGCTCCAAATGTTTCTCCTCAG...CCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGGCATCATGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR TCA 90 bp | GACATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACTTCTGGAGATTCTCCTaGCATTCCCTGACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DMLHMRLYIWNQTCKEDDFWRFS*HSLTAS Trigger: GGAAGCAGTCAGGGAATGTCAGGAGAATCTCCAGAA...GTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR TCA 90 bp | GTAAAAGGTAAGCATCTCTTCTACATGATGCCAGATACACCACATCCAAGCATGGACAGTCCCAAGGATTaGAGTATGGATAGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VKGKHLFYMMPDTPHPSMDSPKD*SMDRQV Trigger: AACCTGCCTATCCATACTTCAATCCTTGGGACTGTC...CATGCTTGGATGTGGTGTATCTGGCATCATGTAGAAGAGATGCTTACCTTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | GACATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACGGCAGACAGGGCAAGTaGTCTTCTCCTGTATATTCG | + |
|
Preference number: 4 (lower is better) Translates to: DMLHMRLYIWNQTCKEDDGRQGK*SSPVYS Trigger: CGAATATACAGGAGAAGACCACTTGCCCTGTCTGCC...GTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | CATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACTACTCTCAGTCTGGACCTaGCACTTCCAGGAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAPHEIIHMESNLQGRRLLSVWT*HFQESL Trigger: CAGACTTTCCTGGAAGTGCCAGGTCCAGACTGAGAG...TAGTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | TTCTACATGATGCCAGATACACCACATCCAAGCATGACAGAAGGGAGACCATGGCTTAGAAACTGCTTTTaGCTTCTTCAGTGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FYMMPDTPHPSMTEGRPWLRNCF*LLQCPD Trigger: ATCTGGACACTGAAGAAGCCAAAAGCAGTTTCTAAG...CCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGGCATCATGTAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTCTGAGGAGAAACATTTaGAGCCCAAGATACCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KTKGNMEGRGHGYYPDLALRRNI*SPRYRY Trigger: ATAACGGTATCTTGGGCTCCAAATGTTTCTCCTCAG...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | TTCTACATGATGCCAGATACACCACATCCAAGCATGACAGAAGGGAGACCATGGGATGTCACTTGTCTGTaGTCTTCTGAAAGTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FYMMPDTPHPSMTEGRPWDVTCL*SSESIR Trigger: TCTTATACTTTCAGAAGACCACAGACAAGTGACATC...CCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGGCATCATGTAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR TCA 90 bp | TTCAAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAAAAGTCTGTCTTCTTTaGTGTCAGCTTCCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKTKGNMEGRGHGYYPDLKVCLL*CQLPMS Trigger: AGACATTGGAAGCTGACATCAAAGAAGACAGACTTT...TAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR TCA 90 bp | CATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACTAGACAGTCCCAAGGATTaGAGTATGGATAGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HAPHEIIHMESNLQGRRLDSPKD*SMDRQV Trigger: AACCTGCCTATCCATACTTCAATCCTTGGGACTGTC...TAGTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCAAGGAGCTTCTCTCCATaGTGTACACAGAGATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LANRLCQLSSRQREIWKARSFSP*CTQRSL Trigger: GAGAGATCTCTGTGTACACCATGGAGAGAAGCTCCT...TGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | TTCAAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTACTTAGAAACTGCTTTTaGCTTCTTCAGTGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKTKGNMEGRGHGYYPDLLRNCF*LLQCPD Trigger: ATCTGGACACTGAAGAAGCCAAAAGCAGTTTCTAAG...TAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTGATGTCACTTGTCTGTaGTCTTCTGAAAGTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTKGNMEGRGHGYYPDLADVTCL*SSESIR Trigger: TCTTATACTTTCAGAAGACCACAGACAAGTGACATC...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR TCA 90 bp | CTGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCACCAGTAATGTTTTCCTaGGGAGAAACATTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LANRLCQLSSRQREIWKAPVMFS*GETFGA Trigger: GGCTCCAAATGTTTCTCCTCAGGAAAACATTACTGG...TGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR TCA 90 bp | TTGAATGTAAGGTATCCTGAGCGACATAGTGTTAAAAATCCATTAGTTGTGGTCGACAGTCCCAAGGATTaGAGTATGGATAGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNVRYPERHSVKNPLVVVDSPKD*SMDRQV Trigger: AACCTGCCTATCCATACTTCAATCCTTGGGACTGTC...GACCACAACTAATGGATTTTTAACACTATGTCGCTCAGGATACCTTACATTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCACTGTCCAGTATCATCTaGTCCTCTTCTCTGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LANRLCQLSSRQREIWKALSSII*SSSLSL Trigger: AAGACTCAGAGAAGAGGAGCAGATGATACTGGACAG...TGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTTGTGGTCTGGAGTCAGTTCTTATGGATTGTCTTAAACAACAAGGATGAGCTGTCCAGTATCATCTaGTCCTCTTCTCTGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVVVWSQFLWIVLNNKDELSSII*SSSLSL Trigger: AAGACTCAGAGAAGAGGAGCAGATGATACTGGACAG...CTCATCCTTGTTGTTTAAGACAATCCATAAGAACTGACTCCAGACCACAACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR GCA 90 bp | CATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACTAATACCGCTCATATCCTaGAGCAACTCTGTATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HAPHEIIHMESNLQGRRLIPLIS*SNSVSD Trigger: GTCAGATACAGAGTTGCTGCAGGATATGAGCGGTAT...TAGTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCAGCTATACTTCGATCCATaGTGTAACCCTATAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLIDFVNFLQDKGKYGRQLYFDP*CNPITQ Trigger: CTGGGTTATAGGGTTACAGCATGGATCGAAGTATAG...CTGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR GCA 90 bp | CATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACTACTATACTTCGATCCATaGTGTAACCCTATAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HAPHEIIHMESNLQGRRLLYFDP*CNPITQ Trigger: CTGGGTTATAGGGTTACAGCATGGATCGAAGTATAG...TAGTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR TCA 90 bp | TTGAATGTAAGGTATCCTGAGCGACATAGTGTTAAAAATCCATTAGTTGTGGTCTTCAGTGTCCAGATCTaGCTCCATTTCAAAATACCG | + |
|
Preference number: 4 (lower is better) Translates to: LNVRYPERHSVKNPLVVVFSVQI*LHFKIP Trigger: CGGTATTTTGAAATGGAGTCAGATCTGGACACTGAA...GACCACAACTAATGGATTTTTAACACTATGTCGCTCAGGATACCTTACATTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR GCA 90 bp | TTGAATGTAAGGTATCCTGAGCGACATAGTGTTAAAAATCCATTAGTTGTGGTCCTATACTTCGATCCATaGTGTAACCCTATAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNVRYPERHSVKNPLVVVLYFDP*CNPITQ Trigger: CTGGGTTATAGGGTTACAGCATGGATCGAAGTATAG...GACCACAACTAATGGATTTTTAACACTATGTCGCTCAGGATACCTTACATTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR CCA 90 bp | TTAGTTGTGGTCTGGAGTCAGTTCTTATGGATTGTCTTAAACAACAAGGATGAGGATGTCACTTGTCTGTaGTCTTCTGAAAGTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVVVWSQFLWIVLNNKDEDVTCL*SSESIR Trigger: TCTTATACTTTCAGAAGACCACAGACAAGTGACATC...CTCATCCTTGTTGTTTAAGACAATCCATAAGAACTGACTCCAGACCACAACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| 3UTR CAA 72 bp | ATGTGTTGCTGTTCATACTTTCTATTCCTTGACTTCTaGTTGAATGTAAGGTATCCTGAGCGACATAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MCCCSYFLFLDF*LNVRYPERHSV Trigger: AACACTATGTCGCTCAGGATACCTTACATTCAACAAGAAGTCAAGGAATAGAAAGTATGAACAGCAACACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS GCA 90 bp | GATAAGTTCCTCCACCAACTGACTCTGTTGAGCCAGCTCAGCCTCTaGCCCCGCCAGGCTGTCCAGTATCATCTGCTCCTCTTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DKFLHQLTLLSQLSL*PRQAVQYHLLLFSE Trigger: CTCAGAGAAGAGGAGCAGATGATACTGGACAGCCTGGCGGGGGCAGAGGCTGAGCTGGCTCAACAGAGTCAGTTGGTGGAGGAACTTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS CCA 90 bp | ACACGGTGGCCACAGCCTAGACTCAGGGCTTTGGTCAAAAGCTCTTaGCAGACAGGGCAAGTGGTCTTCTCCTGTATATTCGTCAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: TRWPQPRLRALVKSS*QTGQVVFSCIFVRP Trigger: AGGTCTGACGAATATACAGGAGAAGACCACTTGCCCTGTCTGCCAAGAGCTTTTGACCAAAGCCCTGAGTCTAGGCTGTGGCCACCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS TCA 90 bp | AGTTCAGAGGACACAGGGTCATGGGGGCTGGACAGTCCCAAGGATTaGAGTATGGATAGGCAGGTTGGGAAAAGCAGCATTGGGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SSEDTGSWGLDSPKD*SMDRQVGKSSIGRT Trigger: AGTTCTCCCAATGCTGCTTTTCCCAACCTGCCTATCCATACTTCAATCCTTGGGACTGTCCAGCCCCCATGACCCTGTGTCCTCTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS CCA 90 bp | TCTCTGGGGTTGATCACTGCATTCTTCTTCGTGATGAGACAGGCTTaGCATACACGGTGGCCACAGCCTAGACTCAGGGCTTTGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLGLITAFFFVMRQA*HTRWPQPRLRALVK Trigger: TTTGACCAAAGCCCTGAGTCTAGGCTGTGGCCACCGTGTATGCCAAGCCTGTCTCATCACGAAGAAGAATGCAGTGATCAACCCCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | TTCTACATGATGCCAGATACACCACATCCAAGCATGACAGAAGGGAGACCATGGCACCAACTGACTCTGTaGAGCCAGCTCAGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FYMMPDTPHPSMTEGRPWHQLTL*SQLSLC Trigger: GCAGAGGCTGAGCTGGCTCAACAGAGTCAGTTGGTG...CCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGGCATCATGTAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTCGTGATGAGACAGGCTaGGCATACACGGTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KTKGNMEGRGHGYYPDLARDETG*AYTVAT Trigger: TGTGGCCACCGTGTATGCCAAGCCTGTCTCATCACG...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | ATGACAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACGCCTGTTTGAATCCTTaGTCTCTCAGTCTGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: MTEGRPWEEMPEQHRSIHACLNP*SLSLDL Trigger: CAGGTCCAGACTGAGAGACAAAGGATTCAAACAGGC...GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTACACCAACTGACTCTGTaGAGCCAGCTCAGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FKTKGNMEGRGHGYYPDLHQLTL*SQLSLC Trigger: GCAGAGGCTGAGCTGGCTCAACAGAGTCAGTTGGTG...TAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | ATGACAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACCTTTTCTCTCTGGGGTaGATCACTGCATTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MTEGRPWEEMPEQHRSIHLFSLG*ITAFFF Trigger: GAAGAAGAATGCAGTGATCAACCCCAGAGAGAAAAG...GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACAAGGGAAAGTCTGTCTTCTTaGATGTCAGCTTCCAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: QKGDHGKRCLNSTGPYTRESLSS*MSASNV Trigger: GACATTGGAAGCTGACATCAAAGAAGACAGACTTTC...CCTTGTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | TTCTACATGATGCCAGATACACCACATCCAAGCATGACAGAAGGGAGACCATGGGTATGGATAGGCAGGTaGGGAAAAGCAGCATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FYMMPDTPHPSMTEGRPWVWIGR*GKAALG Trigger: TCCCAATGCTGCTTTTCCCAACCTGCCTATCCATAC...CCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGGCATCATGTAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | TTCTACATGATGCCAGATACACCACATCCAAGCATGACAGAAGGGAGACCATGGCACAGAGATCTCTCTTaGTCCCAATGTCAGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FYMMPDTPHPSMTEGRPWHRDLS*SQCQAS Trigger: TGAAGCCTGACATTGGGACAAAGAGAGATCTCTGTG...CCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGGCATCATGTAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTGCCTGTTTGAATCCTTaGTCTCTCAGTCTGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: KTKGNMEGRGHGYYPDLAACLNP*SLSLDL Trigger: CAGGTCCAGACTGAGAGACAAAGGATTCAAACAGGC...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | ATGACAGAAGGGAGACCATGGGAAGAGATGCCTGAACAGCACAGGTCCATACACACAGTAGGGTCACAGTaGGAAGAATCCTCAAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: MTEGRPWEEMPEQHRSIHTVGSQ*EESSKI Trigger: TATCTTTGAGGATTCTTCCAACTGTGACCCTACTGT...GTGTATGGACCTGTGCTGTTCAGGCATCTCTTCCCATGGTCTCCCTTCTGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTGTATGGATAGGCAGGTaGGGAAAAGCAGCATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KTKGNMEGRGHGYYPDLAVWIGR*GKAALG Trigger: TCCCAATGCTGCTTTTCCCAACCTGCCTATCCATAC...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | CATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACTACGTGATGAGACAGGCTaGGCATACACGGTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: HAPHEIIHMESNLQGRRLRDETG*AYTVAT Trigger: TGTGGCCACCGTGTATGCCAAGCCTGTCTCATCACG...TAGTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTCACAGAGATCTCTCTTaGTCCCAATGTCAGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTKGNMEGRGHGYYPDLAHRDLS*SQCQAS Trigger: TGAAGCCTGACATTGGGACAAAGAGAGATCTCTGTG...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCACACCAACTGACTCTGTaGAGCCAGCTCAGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LANRLCQLSSRQREIWKAHQLTL*SQLSLC Trigger: GCAGAGGCTGAGCTGGCTCAACAGAGTCAGTTGGTG...TGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
||
| CDS-3UTR CAA 90 bp | TTCTACATGATGCCAGATACACCACATCCAAGCATGACAGAAGGGAGACCATGGCTGATTAAAGCCTGTTaGAATCCTTTGTCTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FYMMPDTPHPSMTEGRPWLIKAC*NPLSLS Trigger: ACTGAGAGACAAAGGATTCAAACAGGCTTTAATCAG...CCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGGCATCATGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | AAGACAAAGGGAAATATGGAAGGCAGAGGGCATGGATATTACCCTGACCTAGCTCTGATTAAAGCCTGTTaGAATCCTTTGTCTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: KTKGNMEGRGHGYYPDLALIKAC*NPLSLS Trigger: ACTGAGAGACAAAGGATTCAAACAGGCTTTAATCAG...AGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATTTCCCTTTGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | TTAGTTGTGGTCTGGAGTCAGTTCTTATGGATTGTCTTAAACAACAAGGATGAGGTATGGATAGGCAGGTaGGGAAAAGCAGCATTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LVVVWSQFLWIVLNNKDEVWIGR*GKAALG Trigger: TCCCAATGCTGCTTTTCCCAACCTGCCTATCCATAC...CTCATCCTTGTTGTTTAAGACAATCCATAAGAACTGACTCCAGACCACAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | TTAGTTGTGGTCTGGAGTCAGTTCTTATGGATTGTCTTAAACAACAAGGATGAGCACAGAGATCTCTCTTaGTCCCAATGTCAGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LVVVWSQFLWIVLNNKDEHRDLS*SQCQAS Trigger: TGAAGCCTGACATTGGGACAAAGAGAGATCTCTGTG...CTCATCCTTGTTGTTTAAGACAATCCATAAGAACTGACTCCAGACCACAACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | TTGAATGTAAGGTATCCTGAGCGACATAGTGTTAAAAATCCATTAGTTGTGGTCGCCTGTTTGAATCCTTaGTCTCTCAGTCTGGACCTG | + |
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Preference number: 5 (lower is better) Translates to: LNVRYPERHSVKNPLVVVACLNP*SLSLDL Trigger: CAGGTCCAGACTGAGAGACAAAGGATTCAAACAGGC...GACCACAACTAATGGATTTTTAACACTATGTCGCTCAGGATACCTTACATTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | TGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCAGTCTCTCTGTTCCTCCTaGTCCAGGATTCTTCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: WLIDFVNFLQDKGKYGRQSLCSS*SRILLS Trigger: GCTTAGAAGAATCCTGGACAAGGAGGAACAGAGAGA...CTGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | CATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACTACTTTTCTCTCTGGGGTaGATCACTGCATTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: HAPHEIIHMESNLQGRRLLFSLG*ITAFFF Trigger: GAAGAAGAATGCAGTGATCAACCCCAGAGAGAAAAG...TAGTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | CTGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCACTTTTCTCTCTGGGGTaGATCACTGCATTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LANRLCQLSSRQREIWKALFSLG*ITAFFF Trigger: GAAGAAGAATGCAGTGATCAACCCCAGAGAGAAAAG...TGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | GACATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACGAAAGTCTGTCTTCTTaGATGTCAGCTTCCAATGTC | + |
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Preference number: 5 (lower is better) Translates to: DMLHMRLYIWNQTCKEDDESLSS*MSASNV Trigger: GACATTGGAAGCTGACATCAAAGAAGACAGACTTTC...GTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | TTGAATGTAAGGTATCCTGAGCGACATAGTGTTAAAAATCCATTAGTTGTGGTCTCTCTCTGTTCCTCCTaGTCCAGGATTCTTCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: LNVRYPERHSVKNPLVVVSLCSS*SRILLS Trigger: GCTTAGAAGAATCCTGGACAAGGAGGAACAGAGAGA...GACCACAACTAATGGATTTTTAACACTATGTCGCTCAGGATACCTTACATTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | GACATGCTCCACATGAGATTATACATATGGAATCAAACTTGCAAGGAAGACGACACAGTAGGGTCACAGTaGGAAGAATCCTCAAAGATA | + |
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Preference number: 5 (lower is better) Translates to: DMLHMRLYIWNQTCKEDDTVGSQ*EESSKI Trigger: TATCTTTGAGGATTCTTCCAACTGTGACCCTACTGT...GTCGTCTTCCTTGCAAGTTTGATTCCATATGTATAATCTCATGTGGAGCATGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | TTAGTTGTGGTCTGGAGTCAGTTCTTATGGATTGTCTTAAACAACAAGGATGAGGAAAGTCTGTCTTCTTaGATGTCAGCTTCCAATGTC | + |
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Preference number: 5 (lower is better) Translates to: LVVVWSQFLWIVLNNKDEESLSS*MSASNV Trigger: GACATTGGAAGCTGACATCAAAGAAGACAGACTTTC...CTCATCCTTGTTGTTTAAGACAATCCATAAGAACTGACTCCAGACCACAACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060315.12 ENSMUST00000106849.9 |
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| CDS-3UTR CAA 90 bp | TGGCTAATAGACTTTGTCAACTTTCTTCAAGACAAAGGGAAATATGGAAGGCAGACAGTAGGGTCACAGTaGGAAGAATCCTCAAAGATA | + |
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Preference number: 5 (lower is better) Translates to: WLIDFVNFLQDKGKYGRQTVGSQ*EESSKI Trigger: TATCTTTGAGGATTCTTCCAACTGTGACCCTACTGT...CTGCCTTCCATATTTCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS GCA 72 bp | CTCCACCAACTGACTCTGTTGAGCCAGCTCAGCCTCTaGCCCCGCCAGGCTGTCCAGTATCATCTGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LHQLTLLSQLSL*PRQAVQYHLLL Trigger: GAGGAGCAGATGATACTGGACAGCCTGGCGGGGGCAGAGGCTGAGCTGGCTCAACAGAGTCAGTTGGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS TCA 72 bp | TTCCTCAGCCTCGTGAGAGCTTTCTGGAGATTCTCCTaGCATTCCCTGACTGCTTCCTCCCAGAGGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: FLSLVRAFWRFS*HSLTASSQRNV Trigger: CACATTCCTCTGGGAGGAAGCAGTCAGGGAATGTCAGGAGAATCTCCAGAAAGCTCTCACGAGGCTGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS TCA 72 bp | GACACAGGGTCATGGGGGCTGGACAGTCCCAAGGATTaGAGTATGGATAGGCAGGTTGGGAAAAGCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: DTGSWGLDSPKD*SMDRQVGKSSI Trigger: AATGCTGCTTTTCCCAACCTGCCTATCCATACTTCAATCCTTGGGACTGTCCAGCCCCCATGACCCTGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS CCA 72 bp | TTCTTCTTCGTGATGAGACAGGCTTGGCATACACGGTaGCCACAGCCTAGACTCAGGGCTTTGGTCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FFFVMRQAWHTR*PQPRLRALVKS Trigger: GCTTTTGACCAAAGCCCTGAGTCTAGGCTGTGGCCACCGTGTATGCCAAGCCTGTCTCATCACGAAGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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| CDS CAA 72 bp | GTGGCCACAAAGGGGTTCAGAACAGTAGGGTCACAGTaGGAAGAATCCTCAAAGATACTATACTTCGATCCA | + |
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Preference number: 6 (lower is better) Translates to: VATKGFRTVGSQ*EESSKILYFDP Trigger: TGGATCGAAGTATAGTATCTTTGAGGATTCTTCCAACTGTGACCCTACTGTTCTGAACCCCTTTGTGGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060315.12 ENSMUST00000106848.8 ENSMUST00000106849.9 |
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