Pregenerated sensors for TRIM30B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052749Ensembl transcript IDs: ENSMUST00000106831.3, ENSMUST00000164410.2, ENSMUST00000171830.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCATCCTCCATGGTGCGAGCTCCTCACAGAGCCCAGCTCAGAGATaGAGAGCTACACTGACTCTGCATCTCCAGCCAGGGGGAACCAGT | + |
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Preference number: 1 (lower is better) Translates to: SILHGASSSQSPAQR*RATLTLHLQPGGTS Trigger: ACTGGTTCCCCCTGGCTGGAGATGCAGAGTCAGTGTAGCTCTGCATCTCTGAGCTGGGCTCTGTGAGGAGCTCGCACCATGGAGGATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR TCA 90 bp | GAGACAGAGAAATACTGGTCTGGGAGGGGAGCTTTCACAGGGAATTaGGCTTGGGAAAGGGAAGGGATTCTTAGGGCAGCATGTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: ETEKYWSGRGAFTGN*AWEREGILRAACVL Trigger: GAGGACACATGCTGCCCTAAGAATCCCTTCCCTTTCCCAAGCTCAATTCCCTGTGAAAGCTCCCCTCCCAGACCAGTATTTCTCTGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR GCA 90 bp | TGCTGCATCCTCTGCCAGGGTGTGATGCCACATCTGGATTCTACTTaGTGCCCTGTAAGTGCTCTCTCTTGCATTTTTCACAGACACAGC | + |
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Preference number: 1 (lower is better) Translates to: CCILCQGVMPHLDST*CPVSALSCIFHRHS Trigger: GCTGTGTCTGTGAAAAATGCAAGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAGATGTGGCATCACACCCTGGCAGAGGATGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR TCA 90 bp | AGTTGGGGCAGAAAGCTCCATGATGGGGCACCTTCTCAGCATGCATaGAGACCTGAATTCTGTCTCTGGAACCACAAACCAGGTAGATCT | + |
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Preference number: 1 (lower is better) Translates to: SWGRKLHDGAPSQHA*RPEFCLWNHKPGRS Trigger: AGATCTACCTGGTTTGTGGTTCCAGAGACAGAATTCAGGTCTTCATGCATGCTGAGAAGGTGCCCCATCATGGAGCTTTCTGCCCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR GCA 90 bp | TGCATCCTCTGCCAGGGTGTGATGCCACATCTGGATTCTACTTGCTaGCCTGTAAGTGCTCTCTCTTGCATTTTTCACAGACACAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: CILCQGVMPHLDSTC*PVSALSCIFHRHSC Trigger: ACAGCTGTGTCTGTGAAAAATGCAAGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAGATGTGGCATCACACCCTGGCAGAGGATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR CCA 90 bp | CTGGGGCCACTGTCACAGGTCTCCAAGGCATTGTTCACAATCATGTaGCATTCTTTTGATTGTGTTCCAACAGTGGTGGGTGGATCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LGPLSQVSKALFTIM*HSFDCVPTVVGGSE Trigger: CTCTGATCCACCCACCACTGTTGGAACACAATCAAAAGAATGCCACATGATTGTGAACAATGCCTTGGAGACCTGTGACAGTGGCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
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| 3UTR CCA 90 bp | ATGCAGTCTGTTCAAATGGGAATAGGAGACAGAGAAATACTGGTCTaGGAGGGGAGCTTTCACAGGGAATTGAGCTTGGGAAAGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: MQSVQMGIGDREILV*EGSFHRELSLGKGR Trigger: CCTTCCCTTTCCCAAGCTCAATTCCCTGTGAAAGCTCCCCTCCCAGACCAGTATTTCTCTGTCTCCTATTCCCATTTGAACAGACTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR TCA 90 bp | CAGTGTAGATGCACAGCTAGATACAAGCCCATGGCGTGGACAGAATaGTGGATCCACAAGGAATCTGAAAGTACCTGTAGCTCCATTTGC | + |
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Preference number: 1 (lower is better) Translates to: QCRCTARYKPMAWTE*WIHKESESTCSSIC Trigger: GCAAATGGAGCTACAGGTACTTTCAGATTCCTTGTGGATCCATCATTCTGTCCACGCCATGGGCTTGTATCTAGCTGTGCATCTACACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CCA 90 bp | AATAAACTCTGGAAGACATTGAGAGGAGAGGGCTTCATGGTGCTGTaGTTTCTCCTTACCCCAGTATCACTGGACATCATGAGCCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: NKLWKTLRGEGFMVL*FLLTPVSLDIMSPE Trigger: TTCAGGGCTCATGATGTCCAGTGATACTGGGGTAAGGAGAAACCACAGCACCATGAAGCCCTCTCCTCTCAATGTCTTCCAGAGTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CCA 90 bp | CAGAATCCATTTGAGGTAAAAGTCCCTCTGCCTTTATTCCCCTTCTaGGGCCACTGTCACAGGTCTCCAAGGCATTGTTCACAATCATGT | + |
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Preference number: 1 (lower is better) Translates to: QNPFEVKVPLPLFPF*GHCHRSPRHCSQSC Trigger: ACATGATTGTGAACAATGCCTTGGAGACCTGTGACAGTGGCCCCAGAAGGGGAATAAAGGCAGAGGGACTTTTACCTCAAATGGATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
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| 3UTR TCA 90 bp | CTGAGAGGACCAGACAGAGAGAGGGCCAAGACACTGAATTGTAGGTaGCAGGACACTTATCAAAGGCATATACAGACCTATACTTCATCC | + |
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Preference number: 1 (lower is better) Translates to: LRGPDRERAKTLNCR*QDTYQRHIQTYTSS Trigger: GGATGAAGTATAGGTCTGTATATGCCTTTGATAAGTGTCCTGTCACCTACAATTCAGTGTCTTGGCCCTCTCTCTGTCTGGTCCTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR TCA 90 bp | GTCACAGGTCTCCAAGGCATTGTTCACAATCATGTGGCATTCTTTTaGTTGTGTTCCAACAGTGGTGGGTGGATCAGAGGTGCTACTTCT | + |
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Preference number: 1 (lower is better) Translates to: VTGLQGIVHNHVAFF*LCSNSGGWIRGATS Trigger: AGAAGTAGCACCTCTGATCCACCCACCACTGTTGGAACACAATCAAAAGAATGCCACATGATTGTGAACAATGCCTTGGAGACCTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
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| 3UTR GCA 90 bp | AGAAGAAACACGGAGAAGCCGTGTTTAAATCAAGCAGAGGCAGATTaGTGTGCAGAGTGGGAGAAGCAACGTGAAACCAGAGACTTAACA | + |
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Preference number: 1 (lower is better) Translates to: RRNTEKPCLNQAEAD*CAEWEKQRETRDLT Trigger: TGTTAAGTCTCTGGTTTCACGTTGCTTCTCCCACTCTGCACAGCAATCTGCCTCTGCTTGATTTAAACACGGCTTCTCCGTGTTTCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CCA 90 bp | CACTTTTCCATTTACAATAATCCTCGTTCCTCCTGTGAATCCCCTTaGGAAGCTAAACCTCAGCAACACATATGTGGCCTGTTCCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: HFSIYNNPRSSCESP*EAKPQQHICGLFPS Trigger: GCTTGGGAACAGGCCACATATGTGTTGCTGAGGTTTAGCTTCCCAAGGGGATTCACAGGAGGAACGAGGATTATTGTAAATGGAAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR CCA 90 bp | CTCTTGCATTTTTCACAGACACAGCTGTTCTTTGCTGTTCTTTGGTaGTCTTTACTGGTCTTTGTTGGTCTTAGGGTGATTGGCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: LLHFSQTQLFFAVLW*SLLVFVGLRVIGRA Trigger: GGCTCTGCCAATCACCCTAAGACCAACAAAGACCAGTAAAGACCACCAAAGAACAGCAAAGAACAGCTGTGTCTGTGAAAAATGCAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR TCA 90 bp | CCCACCATATACAATGACATCAGAGGGACACACTATCTGCTCTCCTaGGTCCCTCTACCCACATTCAGAATCCTTATTTTCTTCCATATG | + |
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Preference number: 1 (lower is better) Translates to: PTIYNDIRGTHYLLS*VPLPTFRILIFFHM Trigger: CATATGGAAGAAAATAAGGATTCTGAATGTGGGTAGAGGGACTCAGGAGAGCAGATAGTGTGTCCCTCTGATGTCATTGTATATGGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CCA 90 bp | CAAATTAAGCACTTCAGTGTAGATGCACAGCTAGATACAAGCCCATaGCGTGGACAGAATGATGGATCCACAAGGAATCTGAAAGTACCT | + |
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Preference number: 1 (lower is better) Translates to: QIKHFSVDAQLDTSP*RGQNDGSTRNLKVP Trigger: AGGTACTTTCAGATTCCTTGTGGATCCATCATTCTGTCCACGCCATGGGCTTGTATCTAGCTGTGCATCTACACTGAAGTGCTTAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR TCA 90 bp | AACATTTCATTCATAGAACAAAGTTGGGGTGCAGCATGTGGTCCATaGTTTAATCCCAGGAGCCAGGCATCACTTCTAGACATGTCTACT | + |
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Preference number: 1 (lower is better) Translates to: NISFIEQSWGAACGP*FNPRSQASLLDMST Trigger: AGTAGACATGTCTAGAAGTGATGCCTGGCTCCTGGGATTAAATCATGGACCACATGCTGCACCCCAACTTTGTTCTATGAATGAAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR GCA 90 bp | GATGATTTCCCACCATATACAATGACATCAGAGGGACACACTATCTaGTCTCCTGAGTCCCTCTACCCACATTCAGAATCCTTATTTTCT | + |
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Preference number: 1 (lower is better) Translates to: DDFPPYTMTSEGHTI*SPESLYPHSESLFS Trigger: AGAAAATAAGGATTCTGAATGTGGGTAGAGGGACTCAGGAGAGCAGATAGTGTGTCCCTCTGATGTCATTGTATATGGTGGGAAATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CCA 90 bp | TCTCTCTTGCATTTTTCACAGACACAGCTGTTCTTTGCTGTTCTTTaGTGGTCTTTACTGGTCTTTGTTGGTCTTAGGGTGATTGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SLLHFSQTQLFFAVL*WSLLVFVGLRVIGR Trigger: TCTGCCAATCACCCTAAGACCAACAAAGACCAGTAAAGACCACCAAAGAACAGCAAAGAACAGCTGTGTCTGTGAAAAATGCAAGAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR CCA 90 bp | CATGAAAGCAAGGGTCAAGGCCATATTCAGATTCAGGATACATTGTaGCAAATACTCAGCATATGCTTTCACCAGAATGGATCTGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: HESKGQGHIQIQDTL*QILSICFHQNGSVA Trigger: AGCTACAGATCCATTCTGGTGAAAGCATATGCTGAGTATTTGCCACAATGTATCCTGAATCTGAATATGGCCTTGACCCTTGCTTTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
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| 3UTR TCA 90 bp | TTCTCCTTGGAGTCCAGGAACTCTCTTAATCCGTTAAACTGTCTCTaGACATTTTCTACACTGCTCTGTATTTGGTTCTTCATGGGTAAG | + |
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Preference number: 1 (lower is better) Translates to: FSLESRNSLNPLNCL*TFSTLLCIWFFMGK Trigger: CTTACCCATGAAGAACCAAATACAGAGCAGTGTAGAAAATGTTCAGAGACAGTTTAACGGATTAAGAGAGTTCCTGGACTCCAAGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR CCA 90 bp | TCTAGACATGTCTACTTCCAGGTATTGTTCCCCTGTGCCAATAGTTaGATATCCCAGGACAACAAAATGATAGATCTCAGAAATTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: SRHVYFQVLFPCANS*ISQDNKMIDLRNLQ Trigger: TTGCAAATTTCTGAGATCTATCATTTTGTTGTCCTGGGATATCCAACTATTGGCACAGGGGAACAATACCTGGAAGTAGACATGTCTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CCA 90 bp | ACTGTCTCTGAACATTTTCTACACTGCTCTGTATTTGGTTCTTCATaGGTAAGAAAAGAGAGAGGGATGCAGTCTGTTCAAATGGGAATA | + |
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Preference number: 1 (lower is better) Translates to: TVSEHFLHCSVFGSS*VRKERGMQSVQMGI Trigger: TATTCCCATTTGAACAGACTGCATCCCTCTCTCTTTTCTTACCCATGAAGAACCAAATACAGAGCAGTGTAGAAAATGTTCAGAGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR TCA 90 bp | ATAGAACCAATAGATGAAAGCTTCATAGGTAGAAACATCATAAAATaGGAGAGTCCTAGCTTCCCAGGACAGGAAAACTCCAACATGACT | + |
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Preference number: 1 (lower is better) Translates to: IEPIDESFIGRNIIK*ESPSFPGQENSNMT Trigger: AGTCATGTTGGAGTTTTCCTGTCCTGGGAAGCTAGGACTCTCTCATTTTATGATGTTTCTACCTATGAAGCTTTCATCTATTGGTTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CCA 90 bp | TCAGGATACATTGTGGCAAATACTCAGCATATGCTTTCACCAGAATaGATCTGTAGCTATATTCCGACATCCAAAAAGAATAAGCAACTC | + |
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Preference number: 1 (lower is better) Translates to: SGYIVANTQHMLSPE*ICSYIPTSKKNKQL Trigger: GAGTTGCTTATTCTTTTTGGATGTCGGAATATAGCTACAGATCCATTCTGGTGAAAGCATATGCTGAGTATTTGCCACAATGTATCCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTTCTGGGGCCACTGTCACAGGTCTCCAAGGCATTGTTCACAATCATGTGCACTATCTGCTCTCCTaGGTCCCTCTACCCACATTC | + |
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Preference number: 2 (lower is better) Translates to: SPSGATVTGLQGIVHNHVHYLLS*VPLPTF Trigger: GAATGTGGGTAGAGGGACTCAGGAGAGCAGATAGTG...CACATGATTGTGAACAATGCCTTGGAGACCTGTGACAGTGGCCCCAGAAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTTCTGGGGCCACTGTCACAGGTCTCCAAGGCATTGTTCACAATCATGTGGAGGGACACACTATCTaGTCTCCTGAGTCCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: SPSGATVTGLQGIVHNHVEGHTI*SPESLY Trigger: GTAGAGGGACTCAGGAGAGCAGATAGTGTGTCCCTC...CACATGATTGTGAACAATGCCTTGGAGACCTGTGACAGTGGCCCCAGAAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR-3UTR GCA 90 bp | AACCTCTCTGAGATCCTGAATGGAACCCCACATACAGCTTCCTGTTCCACTGGAAAGCATCCTCCATGGTaGGAGCTCCTCACAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: NLSEILNGTPHTASCSTGKHPPW*ELLTEP Trigger: GGGCTCTGTGAGGAGCTCGCACCATGGAGGATGCTT...TCCAGTGGAACAGGAAGCTGTATGTGGGGTTCCATTCAGGATCTCAGAGAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGCTGCACCAGCTCATTTTCAGACTCTCCCAGCCTTTTCACAACCTCTTCGCTTTCACAGGGAATTaGGCTTGGGAAAGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: PLLHQLIFRLSQPFHNLFAFTGN*AWEREG Trigger: CCCTTCCCTTTCCCAAGCTCAATTCCCTGTGAAAGC...GAAGAGGTTGTGAAAAGGCTGGGAGAGTCTGAAAATGAGCTGGTGCAGCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR CAA 90 bp | CTGCTGCATCCTCTGCCAGGGTGTGATGCCACATCTGGATTCTACTaGCTGCCCTGTAAGTGCTCTCTCTTGCATTTTTCACAGACACAG | + |
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Preference number: 2 (lower is better) Translates to: LLHPLPGCDATSGFY*LPCKCSLLHFSQTQ Trigger: CTGTGTCTGTGAAAAATGCAAGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAGATGTGGCATCACACCCTGGCAGAGGATGCAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTTCTGGGGCCACTGTCACAGGTCTCCAAGGCATTGTTCACAATCATGTGCTGTTTCTTCTGGAATaGACAGCCATTGCTGATTCG | + |
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Preference number: 2 (lower is better) Translates to: SPSGATVTGLQGIVHNHVLFLLE*TAIADS Trigger: CGAATCAGCAATGGCTGTTCATTCCAGAAGAAACAG...CACATGATTGTGAACAATGCCTTGGAGACCTGTGACAGTGGCCCCAGAAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGGACACTTATCAAAGGCATATACAGACCTATACTTCATCCCTATAATCCACCCCCTGACCTGCTCTaGTCCCTGGCAATCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: DRTLIKGIYRPILHPYNPPPDLL*SLAIPC Trigger: ACAGGGGATTGCCAGGGATCAGAGCAGGTCAGGGGG...TGGATTATAGGGATGAAGTATAGGTCTGTATATGCCTTTGATAAGTGTCCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAAATACTGGTCTGGGAGGGGAGCTTTCACAGGGAATTGAGCTTGGGAAATCCTGTGAATCCCCTTaGGAAGCTAAACCTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: QRNTGLGGELSQGIELGKSCESP*EAKPQQ Trigger: TTGCTGAGGTTTAGCTTCCCAAGGGGATTCACAGGA...TTTCCCAAGCTCAATTCCCTGTGAAAGCTCCCCTCCCAGACCAGTATTTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR CAA 90 bp | GATCTCATTATGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGGTTaGAACTCAGAAACTTCAGAAGAGCAGTCAGTGCTCTTAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: DLIMGGCEPPCGCWG*NSETSEEQSVLLTA Trigger: AGCAGTTAAGAGCACTGACTGCTCTTCTGAAGTTTCTGAGTTCAAACCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CAA 90 bp | TGGAACCCCACATACAGCTTCCTGTTCCACTGGAATCAGAGGCAGTaGGGGGAAAGTCTCAAATCATCACATGGAGAAACAACCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: WNPTYSFLFHWNQRQ*GESLKSSHGETTST Trigger: AGTAGAGGTTGTTTCTCCATGTGATGATTTGAGACTTTCCCCCAACTGCCTCTGATTCCAGTGGAACAGGAAGCTGTATGTGGGGTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTTCTGGGGCCACTGTCACAGGTCTCCAAGGCATTGTTCACAATCATGTGCATCTCTTGTCTATATaGAGGGAAGGTTTGGAAACT | + |
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Preference number: 2 (lower is better) Translates to: SPSGATVTGLQGIVHNHVHLLSI*REGLET Trigger: AGTTTCCAAACCTTCCCTTCATATAGACAAGAGATG...CACATGATTGTGAACAATGCCTTGGAGACCTGTGACAGTGGCCCCAGAAGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR-3UTR TCA 90 bp | CTATTAACCTTTCCTTTTCACGGTCTGGTGGGTGATGGACTAGAGGGGAGGTTACCTTCTCAGCATGCATaGAGACCTGAATTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LLTFPFHGLVGDGLEGRLPSQHA*RPEFCL Trigger: GAGACAGAATTCAGGTCTTCATGCATGCTGAGAAGG...TAACCTCCCCTCTAGTCCATCACCCACCAGACCGTGAAAAGGAAAGGTTAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCACGGTCTGGTGGGTaGTGGACTAGAGGGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: IFLPTGMKSHPRTIQGTESRSGG*WTRGEV Trigger: AACCTCCCCTCTAGTCCATCACCCACCAGACCGTGA...TTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR CAA 90 bp | TGTCACAGGTCTCCAAGGCATTGTTCACAATCATGTGGCATTCTTTaGATTGTGTTCCAACAGTGGTGGGTGGATCAGAGGTGCTACTTC | + |
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Preference number: 2 (lower is better) Translates to: CHRSPRHCSQSCGIL*IVFQQWWVDQRCYF Trigger: GAAGTAGCACCTCTGATCCACCCACCACTGTTGGAACACAATCAAAAGAATGCCACATGATTGTGAACAATGCCTTGGAGACCTGTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATATGTTGTTCCTCCTATAGAGTTGCAGACCCCTTCAGCTCTTTGAGTACTCTTACGTGGTGCACCTaGAGCCACTGTTTCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: FICCSSYRVADPFSSLSTLTWCT*SHCFTA Trigger: TGCAGTGAAACAGTGGCTGCAGGTGCACCACGTAAG...AGTACTCAAAGAGCTGAAGGGGTCTGCAACTCTATAGGAGGAACAACATATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCACCAGCTCATTTTCAGACTCTCCCAGCCTTTTCACAACCTCTTCCTTCGAAAAGAGAGAGGGATaGAGTCTGTTCAAATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CCTSSFSDSPSLFTTSSFEKREG*SLFKWE Trigger: TTCCCATTTGAACAGACTGCATCCCTCTCTCTTTTC...GAAGGAAGAGGTTGTGAAAAGGCTGGGAGAGTCTGAAAATGAGCTGGTGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTCTCTGAGATCCTGAATGGAACCCCACATACAGCTTCCTGTTCCACTGGACATATTTCCCAACAATaGGAGTTTCAGAAGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: NLSEILNGTPHTASCSTGHISQQ*EFQKPP Trigger: TGGTGGCTTCTGAAACTCCCATTGTTGGGAAATATG...TCCAGTGGAACAGGAAGCTGTATGTGGGGTTCCATTCAGGATCTCAGAGAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCGAAAGAATGGGCCTGTaGAGACCTGACAGAGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: FSPNRHEITSKNNPGNRIERMGL*RPDRVG Trigger: CCCAACTCTGTCAGGTCTCCACAGGCCCATTCTTTC...GATTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGAGCAGCCCTTCCTGGAACTTTCTCAAGGCAGAAAAATTTAGACACAATTGATGAAGCCAGATGCTaGCAGCTGGGATGCGACATT | + |
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Preference number: 2 (lower is better) Translates to: NRAALPGTFSRQKNLDTIDEARC*QLGCDI Trigger: AATGTCGCATCCCAGCTGTCAGCATCTGGCTTCATC...AATTGTGTCTAAATTTTTCTGCCTTGAGAAAGTTCCAGGAAGGGCTGCTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCTACTGCAGCTGTCTTTaGACTCTACAGAAGAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: FSPNRHEITSKNNPGNRIYCSCL*TLQKRG Trigger: CCCCCTCTTCTGTAGAGTCCAAAGACAGCTGCAGTA...GATTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCATTGTGTTCCAACAGTaGTGGGTGGATCAGAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FSPNRHEITSKNNPGNRIIVFQQ*WVDQRC Trigger: GCACCTCTGATCCACCCACCACTGTTGGAACACAAT...GATTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTTTCTACACTGCTCTGTATTTGGTTCTTCATGGGTAAGAAAAGAGAGAGGACCAAGCATCCTCCATaGTGCGAGCTCCTCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TFSTLLCIWFFMGKKRERTKHPP*CELLTE Trigger: CTCTGTGAGGAGCTCGCACCATGGAGGATGCTTGGT...CCTCTCTCTTTTCTTACCCATGAAGAACCAAATACAGAGCAGTGTAGAAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTTTCTACACTGCTCTGTATTTGGTTCTTCATGGGTAAGAAAAGAGAGAGGGAACACTGGGGCAGGTaGCAAGAAGTGCGCATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TFSTLLCIWFFMGKKREREHWGR*QEVRMF Trigger: GAACATGCGCACTTCTTGCCACCTGCCCCAGTGTTC...CCTCTCTCTTTTCTTACCCATGAAGAACCAAATACAGAGCAGTGTAGAAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCGCACTTCAGTGTAGATaGACAGCTAGATACAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: FSPNRHEITSKNNPGNRIALQCR*TARYKP Trigger: GGGCTTGTATCTAGCTGTGCATCTACACTGAAGTGC...GATTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR GCA 90 bp | GACAGGACACTTATCAAAGGCATATACAGACCTATACTTCATCCCTATAATCCACAAGCAGAGGCAGATTaGTGTGCAGAGTGGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: DRTLIKGIYRPILHPYNPQAEAD*CAEWEK Trigger: CTTCTCCCACTCTGCACAGCAATCTGCCTCTGCTTG...TGGATTATAGGGATGAAGTATAGGTCTGTATATGCCTTTGATAAGTGTCCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGCCCTGAAGTGATGAAAAGTCACAGCCATAAGTACAGTGAAGGAATCAACGGTCAGATCTCATTATaGGTGGTTGTGAGCCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: MSPEVMKSHSHKYSEGINGQISL*VVVSHH Trigger: ATGGTGGCTCACAACCACCCATAATGAGATCTGACC...GTTGATTCCTTCACTGTACTTATGGCTGTGACTTTTCATCACTTCAGGGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR CCA 90 bp | AATATTAGGCATCTGAAACCAAGAAGCCTTGCCATTCGTGGTAACTTGTTTCCAGCTCCCCATTCTCCTTaGAGTCCAGGAACTCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: NIRHLKPRSLAIRGNLFPAPHSP*SPGTLL Trigger: TAAGAGAGTTCCTGGACTCCAAGGAGAATGGGGAGC...TGGAAACAAGTTACCACGAATGGCAAGGCTTCTTGGTTTCAGATGCCTAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACACAGCTGTTCTTTGCTGTTCTTTGGTGGTCTTTACTGGTCTTTGTTGGTCCCTCACTGTTTCTTCTaGAATGAACAGCCATTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RHSCSLLFFGGLYWSLLVPHCFF*NEQPLL Trigger: CAGCAATGGCTGTTCATTCCAGAAGAAACAGTGAGG...GACCAACAAAGACCAGTAAAGACCACCAAAGAACAGCAAAGAACAGCTGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGCTTCCCTTACCTTGAAATGATTGTAGCATGCTGTTCAGATCTGGAGGTTCATTGGAACGACCTTTaGCCTTTGACACCACTGACT | + |
|
Preference number: 2 (lower is better) Translates to: FSFPYLEMIVACCSDLEVHWNDL*PLTPLT Trigger: AGTCAGTGGTGTCAAAGGTCAAAGGTCGTTCCAATG...AACCTCCAGATCTGAACAGCATGCTACAATCATTTCAAGGTAAGGGAAGCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCACAATCATGTGGCATTCTTTTGATTGTGTTCCAACAGTGGTGGGTGGATCAGACACAGCTGTTCTTTaGTGTTCTTTGGTGGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FTIMWHSFDCVPTVVGGSDTAVL*CSLVVF Trigger: AAAGACCACCAAAGAACAGCAAAGAACAGCTGTGTC...TGATCCACCCACCACTGTTGGAACACAATCAAAAGAATGCCACATGATTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGCTTCCCTTACCTTGAAATGATTGTAGCATGCTGTTCAGATCTGGAGGTTCACTATATAACTCTGTaGATGTTGCAGACACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FSFPYLEMIVACCSDLEVHYITL*MLQTQR Trigger: CCTCTGTGTCTGCAACATTCACAGAGTTATATAGTG...AACCTCCAGATCTGAACAGCATGCTACAATCATTTCAAGGTAAGGGAAGCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR GCA 90 bp | AATATTAGGCATCTGAAACCAAGAAGCCTTGCCATTCGTGGTAACTTGTTTCCATTTGACATTCATACATaGAGCAGTTCCTCCCGATTC | + |
|
Preference number: 2 (lower is better) Translates to: NIRHLKPRSLAIRGNLFPFDIHT*SSSSRF Trigger: GAATCGGGAGGAACTGCTGCATGTATGAATGTCAAA...TGGAAACAAGTTACCACGAATGGCAAGGCTTCTTGGTTTCAGATGCCTAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTTTCTACACTGCTCTGTATTTGGTTCTTCATGGGTAAGAAAAGAGAGAGGCTGCCTCAGAGTGCCTaGAACACTTTTCCATTTACA | + |
|
Preference number: 2 (lower is better) Translates to: TFSTLLCIWFFMGKKRERLPQSA*NTFPFT Trigger: TGTAAATGGAAAAGTGTTCCAGGCACTCTGAGGCAG...CCTCTCTCTTTTCTTACCCATGAAGAACCAAATACAGAGCAGTGTAGAAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCATATGTTGTTCCTCCTATAGAGTTGCAGACCCCTTCAGCTCTTTGAGTACTGTTCTCTTGTTAGGATaGCAAAATTTGGAAAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FICCSSYRVADPFSSLSTVLLLG*QNLEKE Trigger: CTCCTTTTCCAAATTTTGTCATCCTAACAAGAGAAC...AGTACTCAAAGAGCTGAAGGGGTCTGCAACTCTATAGGAGGAACAACATATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR TCA 90 bp | TACAGACCTATACTTCATCCCTATAATCCAGTAGCCATATTTAGACTGATAAGTGGACATCATGAGCCCTaGAGTGATGAAAAGTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: YRPILHPYNPVAIFRLISGHHEP*SDEKSQ Trigger: CTGTGACTTTTCATCACTTCAGGGCTCATGATGTCC...ACTTATCAGTCTAAATATGGCTACTGGATTATAGGGATGAAGTATAGGTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAACTGTATAGATATACGTaGGGATTTAAGAGGGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: IFLPTGMKSHPRTIQGTELYRYT*GFKRVV Trigger: TACCACCCTCTTAAATCCTCACGTATATCTATACAG...TTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGACCTATACTTCATCCCTATAATCCAGTAGCCATATTTAGACTGATAAGTCAGCCACTGTTTCACTaGAGAAACATTGTGCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: YRPILHPYNPVAIFRLISQPLFH*RNIVPT Trigger: TGTGGGCACAATGTTTCTGCAGTGAAACAGTGGCTG...ACTTATCAGTCTAAATATGGCTACTGGATTATAGGGATGAAGTATAGGTCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR-3UTR CCA 90 bp | GACAGGACACTTATCAAAGGCATATACAGACCTATACTTCATCCCTATAATCCAGAGCTCTGGAGGTACTaGTTAGTTCATATGTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: DRTLIKGIYRPILHPYNPELWRY*LVHMLF Trigger: GAACAACATATGAACTAACCAGTACCTCCAGAGCTC...TGGATTATAGGGATGAAGTATAGGTCTGTATATGCCTTTGATAAGTGTCCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR CAA 90 bp | AATATTAGGCATCTGAAACCAAGAAGCCTTGCCATTCGTGGTAACTaGTTTCCACTCAGAGAATTTGTTATACTCACACAGACGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: NIRHLKPRSLAIRGN*FPLREFVILTQTEI Trigger: TATTTCCGTCTGTGTGAGTATAACAAATTCTCTGAGTGGAAACAAGTTACCACGAATGGCAAGGCTTCTTGGTTTCAGATGCCTAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR-3UTR TCA 90 bp | TACAGACCTATACTTCATCCCTATAATCCAGTAGCCATATTTAGACTGATAAGTTTTCAAATGCTATCCTaGAAGTCCCCTATACCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: YRPILHPYNPVAIFRLISFQMLS*KSPIPS Trigger: GGAGGGTATAGGGGACTTTCAGGATAGCATTTGAAA...ACTTATCAGTCTAAATATGGCTACTGGATTATAGGGATGAAGTATAGGTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR-3UTR CCA 90 bp | GACAGGACACTTATCAAAGGCATATACAGACCTATACTTCATCCCTATAATCCACAGAGAAATAAACTCTaGAAGACATTGAGAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: DRTLIKGIYRPILHPYNPQRNKL*KTLRGE Trigger: CTCTCCTCTCAATGTCTTCCAGAGTTTATTTCTCTG...TGGATTATAGGGATGAAGTATAGGTCTGTATATGCCTTTGATAAGTGTCCTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CAA 90 bp | CTAGAGGGGAGGTTAAAGCACCTTAGAACCCTTATTAAAGTGGGTTaGAAAAATCTAAGCTTACAAAGGAGTCTTATTTGGTACCATTTG | + |
|
Preference number: 2 (lower is better) Translates to: LEGRLKHLRTLIKVG*KNLSLQRSLIWYHL Trigger: CAAATGGTACCAAATAAGACTCCTTTGTAAGCTTAGATTTTTCAAACCCACTTTAATAAGGGTTCTAAGGTGCTTTAACCTCCCCTCTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGGACACTTATCAAAGGCATATACAGACCTATACTTCATCCCTATAATCCACATTTACATTTCAAATaGTATCCTGAAAGTCCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: DRTLIKGIYRPILHPYNPHLHFK*YPESPL Trigger: TAGGGGACTTTCAGGATAGCATTTGAAATGTAAATG...TGGATTATAGGGATGAAGTATAGGTCTGTATATGCCTTTGATAAGTGTCCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR TCA 72 bp | CCTCACAGAGCCCAGCTCAGAGATGCAGAGCTACACTaGCTCTGCATCTCCAGCCAGGGGGAACCAGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PHRAQLRDAELH*LCISSQGEPVG Trigger: CCCTACTGGTTCCCCCTGGCTGGAGATGCAGAGTCAGTGTAGCTCTGCATCTCTGAGCTGGGCTCTGTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR GCA 72 bp | CATGGTGCGAGCTCCTCACAGAGCCCAGCTCAGAGATaGAGAGCTACACTGACTCTGCATCTCCAGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HGASSSQSPAQR*RATLTLHLQPG Trigger: CCCTGGCTGGAGATGCAGAGTCAGTGTAGCTCTGCATCTCTGAGCTGGGCTCTGTGAGGAGCTCGCACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR GCA 72 bp | GACCCAGCAGCCATTCTGACCAAGCATCCTCCATGGTaGGAGCTCCTCACAGAGCCCAGCTCAGAGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DPAAILTKHPPW*ELLTEPSSEMQ Trigger: CTGCATCTCTGAGCTGGGCTCTGTGAGGAGCTCGCACCATGGAGGATGCTTGGTCAGAATGGCTGCTGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR TCA 72 bp | AGAAGCCACCACAGGAGTAGGACCCAGCAGCCATTCTaGCCAAGCATCCTCCATGGTGCGAGCTCCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: RSHHRSRTQQPF*PSILHGASSSQ Trigger: CTGTGAGGAGCTCGCACCATGGAGGATGCTTGGTCAGAATGGCTGCTGGGTCCTACTCCTGTGGTGGCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR GCA 72 bp | CTTGAGATCCAGAACACTGGGGCAGGTGGCAAGAAGTaGGCATGTTCAGGCCGGGAGCATAGAGTGGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: LEIQNTGAGGKK*ACSGREHRVDL Trigger: TAAATCCACTCTATGCTCCCGGCCTGAACATGCGCACTTCTTGCCACCTGCCCCAGTGTTCTGGATCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR TCA 72 bp | AGAGTCCTAGCTTCCCAGGACAGGAAAACTCCAACATaGCTGAGAGGACCAGACAGAGAGAGGGCCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RVLASQDRKTPT*LRGPDRERAKT Trigger: TGTCTTGGCCCTCTCTCTGTCTGGTCCTCTCAGTCATGTTGGAGTTTTCCTGTCCTGGGAAGCTAGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR TCA 72 bp | TGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGGTTTaGACTCAGAAACTTCAGAAGAGCAGTCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WVVVSHHVVAGV*TQKLQKSSQCS Trigger: AGAGCACTGACTGCTCTTCTGAAGTTTCTGAGTTCAAACCCCAGCAACCACATGGTGGCTCACAACCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR GCA 72 bp | GTGACTTACGTGGTGCACCTGCAGCCACTGTTTCACTaGAGAAACATTGTGCCCACAGAGTCAAGTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VTYVVHLQPLFH*RNIVPTESSLF Trigger: AAAGAGACTTGACTCTGTGGGCACAATGTTTCTGCAGTGAAACAGTGGCTGCAGGTGCACCACGTAAGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR GCA 72 bp | ACGGAGAAGCCGTGTTTAAATCAAGCAGAGGCAGATTaGTGTGCAGAGTGGGAGAAGCAACGTGAAACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TEKPCLNQAEAD*CAEWEKQRETR Trigger: TCTGGTTTCACGTTGCTTCTCCCACTCTGCACAGCAATCTGCCTCTGCTTGATTTAAACACGGCTTCTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR GCA 72 bp | CTCTGCCAGGGTGTGATGCCACATCTGGATTCTACTTaGTGCCCTGTAAGTGCTCTCTCTTGCATTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LCQGVMPHLDST*CPVSALSCIFH Trigger: GTGAAAAATGCAAGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAGATGTGGCATCACACCCTGGCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR CCA 72 bp | TGGAAGACATTGAGAGGAGAGGGCTTCATGGTGCTGTaGTTTCTCCTTACCCCAGTATCACTGGACATCATG | + |
|
Preference number: 3 (lower is better) Translates to: WKTLRGEGFMVL*FLLTPVSLDIM Trigger: CATGATGTCCAGTGATACTGGGGTAAGGAGAAACCACAGCACCATGAAGCCCTCTCCTCTCAATGTCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR CCA 72 bp | CCTGAATGGAACCCCACATACAGCTTCCTGTTCCACTaGAATCAGAGGCAGTTGGGGGAAAGTCTCAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: PEWNPTYSFLFH*NQRQLGESLKS Trigger: TGATTTGAGACTTTCCCCCAACTGCCTCTGATTCCAGTGGAACAGGAAGCTGTATGTGGGGTTCCATTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR TCA 72 bp | ATTTTACGCACAAAGGAGAGGCTTTCCACAATCCTGTaGCTTACGTGGTGCACCTGCAGCCACTGTTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: ILRTKERLSTIL*LTWCTCSHCFT Trigger: AGTGAAACAGTGGCTGCAGGTGCACCACGTAAGTCACAGGATTGTGGAAAGCCTCTCCTTTGTGCGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR TCA 72 bp | AACTGGAAGACAGTCAAGGAAACCTCTCTGAGATCCTaGATGGAACCCCACATACAGCTTCCTGTTCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: NWKTVKETSLRS*MEPHIQLPVPL Trigger: CAGTGGAACAGGAAGCTGTATGTGGGGTTCCATTCAGGATCTCAGAGAGGTTTCCTTGACTGTCTTCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR TCA 72 bp | AGAAAGCTCCATGATGGGGCACCTTCTCAGCATGCATaGAGACCTGAATTCTGTCTCTGGAACCACAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: RKLHDGAPSQHA*RPEFCLWNHKP Trigger: TGGTTTGTGGTTCCAGAGACAGAATTCAGGTCTTCATGCATGCTGAGAAGGTGCCCCATCATGGAGCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR GCA 72 bp | CCACCATATACAATGACATCAGAGGGACACACTATCTaGTCTCCTGAGTCCCTCTACCCACATTCAGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: PPYTMTSEGHTI*SPESLYPHSES Trigger: GGATTCTGAATGTGGGTAGAGGGACTCAGGAGAGCAGATAGTGTGTCCCTCTGATGTCATTGTATATGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR GCA 72 bp | TGCCAGGGTGTGATGCCACATCTGGATTCTACTTGCTaGCCTGTAAGTGCTCTCTCTTGCATTTTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: CQGVMPHLDSTC*PVSALSCIFHR Trigger: TCTGTGAAAAATGCAAGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAGATGTGGCATCACACCCTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR CCA 72 bp | CACTTCAGTGTAGATGCACAGCTAGATACAAGCCCATaGCGTGGACAGAATGATGGATCCACAAGGAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: HFSVDAQLDTSP*RGQNDGSTRNL Trigger: CAGATTCCTTGTGGATCCATCATTCTGTCCACGCCATGGGCTTGTATCTAGCTGTGCATCTACACTGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR CCA 72 bp | CTCATTATGGGTGGTTGTGAGCCACCATGTGGTTGCTaGGGTTTGAACTCAGAAACTTCAGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LIMGGCEPPCGC*GLNSETSEEQS Trigger: TGACTGCTCTTCTGAAGTTTCTGAGTTCAAACCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR CCA 72 bp | GTTCAAATGGGAATAGGAGACAGAGAAATACTGGTCTaGGAGGGGAGCTTTCACAGGGAATTGAGCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VQMGIGDREILV*EGSFHRELSLG Trigger: TCCCAAGCTCAATTCCCTGTGAAAGCTCCCCTCCCAGACCAGTATTTCTCTGTCTCCTATTCCCATTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR TCA 72 bp | TTCATAGAACAAAGTTGGGGTGCAGCATGTGGTCCATaGTTTAATCCCAGGAGCCAGGCATCACTTCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FIEQSWGAACGP*FNPRSQASLLD Trigger: GTCTAGAAGTGATGCCTGGCTCCTGGGATTAAATCATGGACCACATGCTGCACCCCAACTTTGTTCTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR TCA 72 bp | AGCCTCACTGTTTCTTCTGGAATGAACAGCCATTGCTaGTTCGCAATGGTGTTTGCAAGCAGACTGAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLTVSSGMNSHC*FAMVFASRLSY Trigger: GTAGCTCAGTCTGCTTGCAAACACCATTGCGAATCAGCAATGGCTGTTCATTCCAGAAGAAACAGTGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR TCA 72 bp | AGGGTGATTGGCAGAGCCTCACTGTTTCTTCTGGAATaGACAGCCATTGCTGATTCGCAATGGTGTTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RVIGRASLFLLE*TAIADSQWCLQ Trigger: TTGCAAACACCATTGCGAATCAGCAATGGCTGTTCATTCCAGAAGAAACAGTGAGGCTCTGCCAATCACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR GCA 72 bp | TCAGGCCGGGAGCATAGAGTGGATTTAGCAGTTTACTaGCTCAGAGTGCCTGGAACACTTTTCCATTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SGREHRVDLAVY*LRVPGTLFHLQ Trigger: TTGTAAATGGAAAAGTGTTCCAGGCACTCTGAGGCAGTAAACTGCTAAATCCACTCTATGCTCCCGGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR GCA 72 bp | TGGAATGAACAGCCATTGCTGATTCGCAATGGTGTTTaGAAGCAGACTGAGCTACCACTGTTGACTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WNEQPLLIRNGV*KQTELPLLTSV Trigger: CACAGAAGTCAACAGTGGTAGCTCAGTCTGCTTGCAAACACCATTGCGAATCAGCAATGGCTGTTCATTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR TCA 72 bp | TTCGGGATCATTTGGGGCTGTTTCAGTCTCAAGGTCTaGCTCCTAGGGATAAAATATTCACCTCCACATCTG | + |
|
Preference number: 3 (lower is better) Translates to: FGIIWGCFSLKV*LLGIKYSPPHL Trigger: CAGATGTGGAGGTGAATATTTTATCCCTAGGAGTCAGACCTTGAGACTGAAACAGCCCCAAATGATCCCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR TCA 72 bp | CCAGACAGAGAGAGGGCCAAGACACTGAATTGTAGGTaGCAGGACACTTATCAAAGGCATATACAGACCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PDRERAKTLNCR*QDTYQRHIQTY Trigger: ATAGGTCTGTATATGCCTTTGATAAGTGTCCTGTCACCTACAATTCAGTGTCTTGGCCCTCTCTCTGTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR TCA 72 bp | CTCCAAGGCATTGTTCACAATCATGTGGCATTCTTTTaGTTGTGTTCCAACAGTGGTGGGTGGATCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LQGIVHNHVAFF*LCSNSGGWIRG Trigger: ACCTCTGATCCACCCACCACTGTTGGAACACAATCAAAAGAATGCCACATGATTGTGAACAATGCCTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| 3UTR GCA 72 bp | CTGGATTCTACTTGCTGCCCTGTAAGTGCTCTCTCTTaGATTTTTCACAGACACAGCTGTTCTTTGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LDSTCCPVSALS*IFHRHSCSLLF Trigger: GAACAGCAAAGAACAGCTGTGTCTGTGAAAAATGCAAGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR CCA 72 bp | ATTTACAATAATCCTCGTTCCTCCTGTGAATCCCCTTaGGAAGCTAAACCTCAGCAACACATATGTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IYNNPRSSCESP*EAKPQQHICGL Trigger: CAGGCCACATATGTGTTGCTGAGGTTTAGCTTCCCAAGGGGATTCACAGGAGGAACGAGGATTATTGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR CCA 72 bp | AATTCAGGAATATCGGAGGGAAGTGTGTTAGCCATGTaGAGGTTCAGGAATAGCCCAACCATTGAGGTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: NSGISEGSVLAM*RFRNSPTIEVV Trigger: AACTACCTCAATGGTTGGGCTATTCCTGAACCTCCACATGGCTAACACACTTCCCTCCGATATTCCTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR CCA 72 bp | CATACAGCTTCCTGTTCCACTGGAATCAGAGGCAGTTaGGGGAAAGTCTCAAATCATCACATGGAGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: HTASCSTGIRGS*GKVSNHHMEKQ Trigger: TTGTTTCTCCATGTGATGATTTGAGACTTTCCCCCAACTGCCTCTGATTCCAGTGGAACAGGAAGCTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAAATACTGCAGCTGTCTTaGGACTCTACAGAAGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IFLPTGMKSHPRTIQGTEILQLS*DSTEEG Trigger: CCCCTCTTCTGTAGAGTCCAAAGACAGCTGCAGTAT...TTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCATTCATAGAACAAAGTaGGGGTGCAGCATGTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: FSPNRHEITSKNNPGNRIIHRTK*GCSMWS Trigger: GGACCACATGCTGCACCCCAACTTTGTTCTATGAAT...GATTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCCAGGTCTCCAAGGCATaGTTCACAATCATGTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: FSPNRHEITSKNNPGNRIQVSKA*FTIMWH Trigger: ATGCCACATGATTGTGAACAATGCCTTGGAGACCTG...GATTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTGTTCCACTGGAATCAGAGGCAGTTGGGGGAAAGTCTCAAATCATCACAGGTGAAGTGACTAACTaGATGGTTGAATATGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LPVPLESEAVGGKSQIITGEVTN*MVEYVL Trigger: AAGCACATATTCAACCATCAAGTTAGTCACTTCACC...TGTGATGATTTGAGACTTTCCCCCAACTGCCTCTGATTCCAGTGGAACAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR TCA 72 bp | TCCATATGCAGCTCAGCCACACCTAGAACCACACAATaGGTCACAGAATTTAGCTTCCCTTACCTTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: SICSSATPRTTQ*VTEFSFPYLEM Trigger: CATTTCAAGGTAAGGGAAGCTAAATTCTGTGACTCATTGTGTGGTTCTAGGTGTGGCTGAGCTGCATATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR TCA 72 bp | TACAATGACATCAGAGGGACACACTATCTGCTCTCCTaGGTCCCTCTACCCACATTCAGAATCCTTATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: YNDIRGTHYLLS*VPLPTFRILIF Trigger: GAAAATAAGGATTCTGAATGTGGGTAGAGGGACTCAGGAGAGCAGATAGTGTGTCCCTCTGATGTCATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR TCA 72 bp | TTTGGTGGTCTTTACTGGTCTTTGTTGGTCTTAGGGTaGTTGGCAGAGCCTCACTGTTTCTTCTGGAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: FGGLYWSLLVLG*LAEPHCFFWNE Trigger: TTCATTCCAGAAGAAACAGTGAGGCTCTGCCAATCACCCTAAGACCAACAAAGACCAGTAAAGACCACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR GCA 72 bp | CAAAGAAGTATTTCTAAACAGGTCCACATCCTCCTGTaGTCTATTAACCTTTCCTTTTCACGGTCTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QRSISKQVHILL*SINLSFSRSGG Trigger: CCCACCAGACCGTGAAAAGGAAAGGTTAATAGAGCACAGGAGGATGTGGACCTGTTTAGAAATACTTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGACACTTATCAAAGGCATATACAGACCTATACTTCATCCCTATAATCCACCATTGGAACGACCTTaGACCTTTGACACCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: DRTLIKGIYRPILHPYNPPLERP*TFDTTD Trigger: GTCAGTGGTGTCAAAGGTCAAAGGTCGTTCCAATGG...TGGATTATAGGGATGAAGTATAGGTCTGTATATGCCTTTGATAAGTGTCCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCACAATCATGTGGCATTCTTTTGATTGTGTTCCAACAGTGGTGGGTGGATCAAGACACAGCTGTTCTTaGCTGTTCTTTGGTGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FTIMWHSFDCVPTVVGGSRHSCS*LFFGGL Trigger: AAGACCACCAAAGAACAGCAAAGAACAGCTGTGTCT...TGATCCACCCACCACTGTTGGAACACAATCAAAAGAATGCCACATGATTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCTCATGTGGCATTCTTTaGATTGTGTTCCAACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FSPNRHEITSKNNPGNRISCGIL*IVFQQW Trigger: CCACTGTTGGAACACAATCAAAAGAATGCCACATGA...GATTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| 3UTR CCA 72 bp | AAGGGTCAAGGCCATATTCAGATTCAGGATACATTGTaGCAAATACTCAGCATATGCTTTCACCAGAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: KGQGHIQIQDTL*QILSICFHQNG Trigger: TCCATTCTGGTGAAAGCATATGCTGAGTATTTGCCACAATGTATCCTGAATCTGAATATGGCCTTGACCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| 3UTR CCA 72 bp | TTTTCACAGACACAGCTGTTCTTTGCTGTTCTTTGGTaGTCTTTACTGGTCTTTGTTGGTCTTAGGGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: FSQTQLFFAVLW*SLLVFVGLRVI Trigger: AATCACCCTAAGACCAACAAAGACCAGTAAAGACCACCAAAGAACAGCAAAGAACAGCTGTGTCTGTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR TCA 72 bp | ATAGATGAAAGCTTCATAGGTAGAAACATCATAAAATaGGAGAGTCCTAGCTTCCCAGGACAGGAAAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: IDESFIGRNIIK*ESPSFPGQENS Trigger: GGAGTTTTCCTGTCCTGGGAAGCTAGGACTCTCTCATTTTATGATGTTTCTACCTATGAAGCTTTCATCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR GCA 72 bp | CAGATTCAGGATACATTGTGGCAAATACTCAGCATATaGTTTCACCAGAATGGATCTGTAGCTATATTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: QIQDTLWQILSI*FHQNGSVAIFR Trigger: TCGGAATATAGCTACAGATCCATTCTGGTGAAAGCATATGCTGAGTATTTGCCACAATGTATCCTGAATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| 3UTR CCA 72 bp | GAACATTTTCTACACTGCTCTGTATTTGGTTCTTCATaGGTAAGAAAAGAGAGAGGGATGCAGTCTGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EHFLHCSVFGSS*VRKERGMQSVQ Trigger: TTGAACAGACTGCATCCCTCTCTCTTTTCTTACCCATGAAGAACCAAATACAGAGCAGTGTAGAAAATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR CCA 72 bp | ATTGTGGCAAATACTCAGCATATGCTTTCACCAGAATaGATCTGTAGCTATATTCCGACATCCAAAAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: IVANTQHMLSPE*ICSYIPTSKKN Trigger: ATTCTTTTTGGATGTCGGAATATAGCTACAGATCCATTCTGGTGAAAGCATATGCTGAGTATTTGCCACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| 3UTR CCA 72 bp | TCTTCTAAAGGTGAAACAGCTGTTTCTTCGGGAGTATaGAAAAGGATGAATTATTATTGCACTGTAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSKGETAVSSGV*KRMNYYCTVNR Trigger: TCTGTTTACAGTGCAATAATAATTCATCCTTTTCCATACTCCCGAAGAAACAGCTGTTTCACCTTTAGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| CDS-3UTR TCA 90 bp | CATCCTCTGCCAGGGTGTGATGCCACATCTGGATTCTACTTGCTGCCCTGTAAGAGGAAAACTCCAACATaGCTGAGAGGACCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPLPGCDATSGFYLLPCKRKTPT*LRGPDR Trigger: TCTGTCTGGTCCTCTCAGTCATGTTGGAGTTTTCCT...CTTACAGGGCAGCAAGTAGAATCCAGATGTGGCATCACACCCTGGCAGAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCACCAGCTCATTTTCAGACTCTCCCAGCCTTTTCACAACCTCTTCCTTCAGCTGCCCTCTTCTGTaGCTCTGCTTTTGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CCTSSFSDSPSLFTTSSFSCPLL*LCFCWT Trigger: AGTCCAGCAAAAGCAGAGGCACAGAAGAGGGCAGCT...GAAGGAAGAGGTTGTGAAAAGGCTGGGAGAGTCTGAAAATGAGCTGGTGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTGAATCCCCTTGGGAAGCTAAACCTCAGCAACACATATGTGGCCTGTTCGCTCGACAGAAGCTGTaGTCACAATCAGTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SCESPWEAKPQQHICGLFARQKL*SQSVLT Trigger: TGTGAGCACTGATTGTGACCACAGCTTCTGTCGAGC...GAACAGGCCACATATGTGTTGCTGAGGTTTAGCTTCCCAAGGGGATTCACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR CAA 72 bp | CCTCTGCCAGGGTGTGATGCCACATCTGGATTCTACTaGCTGCCCTGTAAGTGCTCTCTCTTGCATTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPGCDATSGFY*LPCKCSLLHFS Trigger: TGAAAAATGCAAGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAGATGTGGCATCACACCCTGGCAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTTTATTCCCCTTCTGGGGCCACTGTCACAGGTCTCCAAGGCATTGTTTTCTCCTTGTACTCATaGTCCACCTCTTCAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCLYSPSGATVTGLQGIVFSLYS*STSSMR Trigger: TCTCATTGAAGAGGTGGACCATGAGTACAAGGAGAA...AACAATGCCTTGGAGACCTGTGACAGTGGCCCCAGAAGGGGAATAAAGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR CAA 72 bp | GCAGAGCCTCACTGTTTCTTCTGGAATGAACAGCCATaGCTGATTCGCAATGGTGTTTGCAAGCAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AEPHCFFWNEQP*LIRNGVCKQTE Trigger: CTCAGTCTGCTTGCAAACACCATTGCGAATCAGCAATGGCTGTTCATTCCAGAAGAAACAGTGAGGCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR CAA 72 bp | GTATTCTCATTCTTCAACCAAAGCATGGCCACAGTTTaGAATGGGCTGCTGCATCCTCTGCCAGGGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFSFFNQSMATV*NGLLHPLPGCD Trigger: ATCACACCCTGGCAGAGGATGCAGCAGCCCATTCAAAACTGTGGCCATGCTTTGGTTGAAGAATGAGAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| CDS-3UTR GCA 90 bp | ACAATAATCCTCGTTCCTCCTGTGAATCCCCTTGGGAAGCTAAACCTCAGCAACTGTGGTCACAATCAGTaGTCACAGGTTCCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TIILVPPVNPLGKLNLSNCGHNQ*SQVPSG Trigger: TCCTGAAGGAACCTGTGAGCACTGATTGTGACCACA...GTTGCTGAGGTTTAGCTTCCCAAGGGGATTCACAGGAGGAACGAGGATTATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| CDS-3UTR GCA 90 bp | AGGATGAAGCCAGATGCTGACAGCTGGGATGCGACATTTTACGCACAAAGGAGACTGTGCCTCTGCTTTTaGTGGACTCATAGTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RMKPDADSWDATFYAQRRLCLCF*WTHSLV Trigger: CACTAAACTATGAGTCCAGCAAAAGCAGAGGCACAG...TCTCCTTTGTGCGTAAAATGTCGCATCCCAGCTGTCAGCATCTGGCTTCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGCAACACATATGTGGCCTGTTCCCAAGCATATTTCCCAACAATGGGAGTTCAGACATTCACTTTCTaGTCCCCCTCTGGAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSNTYVACSQAYFPTMGVQTFTF*SPSGMD Trigger: GTCCATTCCAGAGGGGGAGCAGAAAGTGAATGTCTG...AACTCCCATTGTTGGGAAATATGCTTGGGAACAGGCCACATATGTGTTGCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTCTTTACTGGTCTTTGTTGGTCTTAGGGTGATTGGCAGAGCCTCACTGACACTGAATTGTAGGTaGCAGGACACTTATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WWSLLVFVGLRVIGRASLTLNCR*QDTYQR Trigger: CCTTTGATAAGTGTCCTGTCACCTACAATTCAGTGT...CAGTGAGGCTCTGCCAATCACCCTAAGACCAACAAAGACCAGTAAAGACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| 3UTR CAA 72 bp | CATTCATACATGCAGCAGTTCCTCCCGATTCTGAAATaGACTCAGAAAGAGCTCACTGTCACCACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSYMQQFLPILK*TQKELTVTTRK Trigger: CTTCCTGGTGGTGACAGTGAGCTCTTTCTGAGTCAATTTCAGAATCGGGAGGAACTGCTGCATGTATGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCAACACATATGTGGCCTGTTCCCAAGCATATTTCCCAACAATGGGAGTTCTGTGCCTCTGCTTTTaGTGGACTCATAGTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSNTYVACSQAYFPTMGVLCLCF*WTHSLV Trigger: CACTAAACTATGAGTCCAGCAAAAGCAGAGGCACAG...AACTCCCATTGTTGGGAAATATGCTTGGGAACAGGCCACATATGTGTTGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| CDS-3UTR GCA 90 bp | AACAGAGCAGCCCTTCCTGGAACTTTCTCAAGGCAGAAAAATTTAGACACAATTAGCTGCCCTCTTCTGTaGCTCTGCTTTTGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NRAALPGTFSRQKNLDTISCPLL*LCFCWT Trigger: AGTCCAGCAAAAGCAGAGGCACAGAAGAGGGCAGCT...AATTGTGTCTAAATTTTTCTGCCTTGAGAAAGTTCCAGGAAGGGCTGCTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAGTCTCAAGGTCTGACTCCTAGGGATAAAATATTCACCTCCACATCTGACCAGACATTCACTTTCTaGTCCCCCTCTGGAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQSQGLTPRDKIFTSTSDQTFTF*SPSGMD Trigger: GTCCATTCCAGAGGGGGAGCAGAAAGTGAATGTCTG...GTCAGATGTGGAGGTGAATATTTTATCCCTAGGAGTCAGACCTTGAGACTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| CDS-3UTR CCA 90 bp | ATGAGCCCTGAAGTGATGAAAAGTCACAGCCATAAGTACAGTGAAGGAATCAACGCTCGACAGAAGCTGTaGTCACAATCAGTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MSPEVMKSHSHKYSEGINARQKL*SQSVLT Trigger: TGTGAGCACTGATTGTGACCACAGCTTCTGTCGAGC...GTTGATTCCTTCACTGTACTTATGGCTGTGACTTTTCATCACTTCAGGGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR CAA 72 bp | TGTTCCTCCTATAGAGTTGCAGACCCCTTCAGCTCTTaGAGTACTTTCTATAGGTCTTCCATTGGAACGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSSYRVADPFSS*STFYRSSIGTT Trigger: GGTCGTTCCAATGGAAGACCTATAGAAAGTACTCAAAGAGCTGAAGGGGTCTGCAACTCTATAGGAGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| 3UTR CAA 72 bp | TCTCCAAGGCATTGTTCACAATCATGTGGCATTCTTTaGATTGTGTTCCAACAGTGGTGGGTGGATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPRHCSQSCGIL*IVFQQWWVDQR Trigger: CCTCTGATCCACCCACCACTGTTGGAACACAATCAAAAGAATGCCACATGATTGTGAACAATGCCTTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
||
| 3UTR CAA 72 bp | ACATACAGCTTCCTGTTCCACTGGAATCAGAGGCAGTaGGGGGAAAGTCTCAAATCATCACATGGAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TYSFLFHWNQRQ*GESLKSSHGET Trigger: TGTTTCTCCATGTGATGATTTGAGACTTTCCCCCAACTGCCTCTGATTCCAGTGGAACAGGAAGCTGTATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR CAA 72 bp | TCTGGATTCTACTTGCTGCCCTGTAAGTGCTCTCTCTaGCATTTTTCACAGACACAGCTGTTCTTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFYLLPCKCSL*HFSQTQLFFAV Trigger: AACAGCAAAGAACAGCTGTGTCTGTGAAAAATGCAAGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCTTCCCTTACCTTGAAATGATTGTAGCATGCTGTTCAGATCTGGAGGTTTGTGGTCACAATCAGTaGTCACAGGTTCCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFPYLEMIVACCSDLEVCGHNQ*SQVPSG Trigger: TCCTGAAGGAACCTGTGAGCACTGATTGTGACCACA...AACCTCCAGATCTGAACAGCATGCTACAATCATTTCAAGGTAAGGGAAGCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| CDS-3UTR GCA 90 bp | AATGAGAATTTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGCCTCTTCTGTGCCTCTaGTTTTGCTGGACTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: NENFSPNRHEITSKNNPGPLLCL*FCWTHS Trigger: ACTATGAGTCCAGCAAAAGCAGAGGCACAGAAGAGG...CCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAAATTCTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGCATGTGTCCTCTTTTAATGTCTCTTCAGACATTGCAAAACAAAGATCTTACTCATAGTTTAGTGTaGTGCAGGCTCGACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSMCPLLMSLQTLQNKDLTHSLV*CRLDRS Trigger: GCTTCTGTCGAGCCTGCATCACACTAAACTATGAGT...AAGATCTTTGTTTTGCAATGTCTGAAGAGACATTAAAAGAGGACACATGCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
||
| 3UTR CAA 72 bp | AGCAAGGGTCAAGGCCATATTCAGATTCAGGATACATaGTGGCAAATACTCAGCATATGCTTTCACCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKGQGHIQIQDT*WQILSICFHQN Trigger: ATTCTGGTGAAAGCATATGCTGAGTATTTGCCACAATGTATCCTGAATCTGAATATGGCCTTGACCCTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000171830.2 |
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| 3UTR CAA 72 bp | CATCTGAAACCAAGAAGCCTTGCCATTCGTGGTAACTaGTTTCCACTCAGAGAATTTGTTATACTCACACAG | + |
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Preference number: 4 (lower is better) Translates to: HLKPRSLAIRGN*FPLREFVILTQ Trigger: CTGTGTGAGTATAACAAATTCTCTGAGTGGAAACAAGTTACCACGAATGGCAAGGCTTCTTGGTTTCAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| CDS-3UTR TCA 90 bp | GTGCTACTTCTTCTAAAGGTGAAACAGCTGTTTCTTCGGGAGTATGGAAAAGGAAGAAACATCATAAAATaGGAGAGTCCTAGCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VLLLLKVKQLFLREYGKGRNIIK*ESPSFP Trigger: TGGGAAGCTAGGACTCTCTCATTTTATGATGTTTCT...TCCTTTTCCATACTCCCGAAGAAACAGCTGTTTCACCTTTAGAAGAAGTAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| CDS-3UTR CCA 90 bp | AATATTAGGCATCTGAAACCAAGAAGCCTTGCCATTCGTGGTAACTTGTTTCCATTCTCCTTGTACTCATaGTCCACCTCTTCAATGAGA | + |
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Preference number: 4 (lower is better) Translates to: NIRHLKPRSLAIRGNLFPFSLYS*STSSMR Trigger: TCTCATTGAAGAGGTGGACCATGAGTACAAGGAGAA...TGGAAACAAGTTACCACGAATGGCAAGGCTTCTTGGTTTCAGATGCCTAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| CDS-3UTR TCA 90 bp | GAAATTTACTATAAGCTATATCTGGTAAATCATGAAAGCAAGGGTCAAGGCCATACTCATAGTTTAGTGTaGTGCAGGCTCGACAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: EIYYKLYLVNHESKGQGHTHSLV*CRLDRS Trigger: GCTTCTGTCGAGCCTGCATCACACTAAACTATGAGT...ATGGCCTTGACCCTTGCTTTCATGATTTACCAGATATAGCTTATAGTAAATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| 3UTR CAA 72 bp | CCTCTACTACTTTTAAATTCTGGTGAAGTGACTAACTaGATGGTTGAATATGTGCTTCACACATGTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PLLLLNSGEVTN*MVEYVLHTCSA Trigger: TGCTGAACATGTGTGAAGCACATATTCAACCATCAAGTTAGTCACTTCACCAGAATTTAAAAGTAGTAGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR CAA 72 bp | CACAACAGTAAAGATTATAAGAGGGTTATCAGGGGCTaGAAGCAGAGAAAAATGAGCAGATTCATTAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: HNSKDYKRVIRG*KQRKMSRFISQ Trigger: TTGACTAATGAATCTGCTCATTTTTCTCTGCTTCAAGCCCCTGATAACCCTCTTATAATCTTTACTGTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| 3UTR CAA 72 bp | ATTTATTTATTATATGTAAGTATACTGCAGCTGTCTTaGGACTCTACAGAAGAGGGGGTCAGATCTCATTAT | + |
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Preference number: 4 (lower is better) Translates to: IYLLYVSILQLS*DSTEEGVRSHY Trigger: ATAATGAGATCTGACCCCCTCTTCTGTAGAGTCCAAAGACAGCTGCAGTATACTTACATATAATAAATAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| CDS CCA 90 bp | CTCAACTATATTGGCCATTTGTCGATTAGTTCTCAGATTCCCAAATaGGACACGAACTCGGCACACAGGGCAGCTGCCCTCTTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LNYIGHLSISSQIPK*DTNSAHRAAALFCA Trigger: GGCACAGAAGAGGGCAGCTGCCCTGTGTGCCGAGTTCGTGTCCCATTTGGGAATCTGAGAACTAATCGACAAATGGCCAATATAGTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS-3UTR CAA 90 bp | CAGAGAAATACTGGTCTGGGAGGGGAGCTTTCACAGGGAATTGAGCTTGGGAAAGTCTGTAGCTTCTCCTaGTACTCATGGTCCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: QRNTGLGGELSQGIELGKVCSFS*YSWSTS Trigger: AGAGGTGGACCATGAGTACAAGGAGAAGCTACAGAC...TTTCCCAAGCTCAATTCCCTGTGAAAGCTCCCCTCCCAGACCAGTATTTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| CDS GCA 90 bp | TCATCCTGCCATTCATCACATCTTTTCTCATTTTCCATCAGCTTCTaGAGGGCTGTCTGTAGCTTCTCCTTGTACTCATGGTCCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSCHSSHLFSFSISF*RAVCSFSLYSWSTS Trigger: AGAGGTGGACCATGAGTACAAGGAGAAGCTACAGACAGCCCTGCAGAAGCTGATGGAAAATGAGAAAAGATGTGATGAATGGCAGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS-3UTR CAA 90 bp | TTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGAACAGAATCGTCTGTAGCTTCTCCTaGTACTCATGGTCCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: FSPNRHEITSKNNPGNRIVCSFS*YSWSTS Trigger: AGAGGTGGACCATGAGTACAAGGAGAAGCTACAGAC...GATTCTGTTCCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| CDS-3UTR CAA 90 bp | CTCAGCAACACATATGTGGCCTGTTCCCAAGCATATTTCCCAACAATGGGAGTTGAGTTTCTCTCCATGTaGTGCACAGACATTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: LSNTYVACSQAYFPTMGVEFLSM*CTDIHF Trigger: AAAGTGAATGTCTGTGCACAACATGGAGAGAAACTC...AACTCCCATTGTTGGGAAATATGCTTGGGAACAGGCCACATATGTGTTGCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| CDS-3UTR CAA 90 bp | TTTCTAAACAGGTCCACATCCTCCTGTGCTCTATTAACCTTTCCTTTTCACGGTATTCATAGAACAAAGTaGGGGTGCAGCATGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FLNRSTSSCALLTFPFHGIHRTK*GCSMWS Trigger: GGACCACATGCTGCACCCCAACTTTGTTCTATGAAT...ACCGTGAAAAGGAAAGGTTAATAGAGCACAGGAGGATGTGGACCTGTTTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171830.2 |
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| CDS-3UTR CAA 90 bp | AATGAGAATTTTTCTCCCAACAGGCATGAAATCACATCCAAGAACAATCCAGGGGAGTTTCTCTCCATGTaGTGCACAGACATTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: NENFSPNRHEITSKNNPGEFLSM*CTDIHF Trigger: AAAGTGAATGTCTGTGCACAACATGGAGAGAAACTC...CCCTGGATTGTTCTTGGATGTGATTTCATGCCTGTTGGGAGAAAAATTCTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| CDS CAA 72 bp | CACCAAATCCCAGGAAGTAAAGACCCCAGGAGCTTCTaGCCCAGGTCCCTCTTGGGCATCAGGCTGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: HQIPGSKDPRSF*PRSLLGIRLTP Trigger: GGGAGTCAGCCTGATGCCCAAGAGGGACCTGGGCAAGAAGCTCCTGGGGTCTTTACTTCCTGGGATTTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| CDS GCA 72 bp | GGGCATCAGGCTGACTCCCTTAAGAAGGGTCCCACTTaGCTCCCAGTCAGCTCTCTGTTGCTGAAGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: GHQADSLKKGPT*LPVSSLLLKVI Trigger: GATGACCTTCAGCAACAGAGAGCTGACTGGGAGGCAAGTGGGACCCTTCTTAAGGGAGTCAGCCTGATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| CDS TCA 72 bp | AGGGTCCCACTTGCCTCCCAGTCAGCTCTCTGTTGCTaGAGGTCATCCTGCCATTCATCACATCTTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RVPLASQSALCC*RSSCHSSHLFS Trigger: TGAGAAAAGATGTGATGAATGGCAGGATGACCTTCAGCAACAGAGAGCTGACTGGGAGGCAAGTGGGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| CDS GCA 72 bp | AGTTTCTCTCCATGTTGTGCACAGACATTCACTTTCTaGTCCCCCTCTGGAATGGACTTGAACCCCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SFSPCCAQTFTF*SPSGMDLNPLS Trigger: GCTCAAGGGGTTCAAGTCCATTCCAGAGGGGGAGCAGAAAGTGAATGTCTGTGCACAACATGGAGAGAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS CAA 72 bp | TCCATCAGCTTCTGCAGGGCTGTCTGTAGCTTCTCCTaGTACTCATGGTCCACCTCTTCAATGAGAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SISFCRAVCSFS*YSWSTSSMRAV Trigger: AACAGCTCTCATTGAAGAGGTGGACCATGAGTACAAGGAGAAGCTACAGACAGCCCTGCAGAAGCTGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS CAA 72 bp | AAGAAGGGTCCCACTTGCCTCCCAGTCAGCTCTCTGTaGCTGAAGGTCATCCTGCCATTCATCACATCTTTT | + |
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Preference number: 6 (lower is better) Translates to: KKGPTCLPVSSL*LKVILPFITSF Trigger: AAAAGATGTGATGAATGGCAGGATGACCTTCAGCAACAGAGAGCTGACTGGGAGGCAAGTGGGACCCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164410.2 |
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| CDS CAA 90 bp | TCCCCCTCTGGAATGGACTTGAACCCCTTGAGCCTCTCAACTATATaGGCCATTTGTCGATTAGTTCTCAGATTCCCAAATGGGACACGA | + |
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Preference number: 6 (lower is better) Translates to: SPSGMDLNPLSLSTI*AICRLVLRFPNGTR Trigger: TCGTGTCCCATTTGGGAATCTGAGAACTAATCGACAAATGGCCAATATAGTTGAGAGGCTCAAGGGGTTCAAGTCCATTCCAGAGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS CAA 90 bp | TGGAATGGACTTGAACCCCTTGAGCCTCTCAACTATATTGGCCATTaGTCGATTAGTTCTCAGATTCCCAAATGGGACACGAACTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: WNGLEPLEPLNYIGH*SISSQIPKWDTNSA Trigger: TGCCGAGTTCGTGTCCCATTTGGGAATCTGAGAACTAATCGACAAATGGCCAATATAGTTGAGAGGCTCAAGGGGTTCAAGTCCATTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS CAA 90 bp | CAGACATTCACTTTCTGCTCCCCCTCTGGAATGGACTTGAACCCCTaGAGCCTCTCAACTATATTGGCCATTTGTCGATTAGTTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: QTFTFCSPSGMDLNP*SLSTILAICRLVLR Trigger: TCTGAGAACTAATCGACAAATGGCCAATATAGTTGAGAGGCTCAAGGGGTTCAAGTCCATTCCAGAGGGGGAGCAGAAAGTGAATGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS CAA 90 bp | TGTTGTGCACAGACATTCACTTTCTGCTCCCCCTCTGGAATGGACTaGAACCCCTTGAGCCTCTCAACTATATTGGCCATTTGTCGATTA | + |
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Preference number: 6 (lower is better) Translates to: CCAQTFTFCSPSGMD*NPLSLSTILAICRL Trigger: TAATCGACAAATGGCCAATATAGTTGAGAGGCTCAAGGGGTTCAAGTCCATTCCAGAGGGGGAGCAGAAAGTGAATGTCTGTGCACAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS CAA 72 bp | ACTTTCTGCTCCCCCTCTGGAATGGACTTGAACCCCTaGAGCCTCTCAACTATATTGGCCATTTGTCGATTA | + |
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Preference number: 6 (lower is better) Translates to: TFCSPSGMDLNP*SLSTILAICRL Trigger: TAATCGACAAATGGCCAATATAGTTGAGAGGCTCAAGGGGTTCAAGTCCATTCCAGAGGGGGAGCAGAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS CAA 72 bp | CTTGAACCCCTTGAGCCTCTCAACTATATTGGCCATTaGTCGATTAGTTCTCAGATTCCCAAATGGGACACG | + |
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Preference number: 6 (lower is better) Translates to: LEPLEPLNYIGH*SISSQIPKWDT Trigger: CGTGTCCCATTTGGGAATCTGAGAACTAATCGACAAATGGCCAATATAGTTGAGAGGCTCAAGGGGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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| CDS CAA 72 bp | CAGGACATTATTCACATTCTCCCAGTCAGCTCTCTGTaGCTGAAGGTCATCCTGCCATTCATCACATCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QDIIHILPVSSL*LKVILPFITSF Trigger: AAAAGATGTGATGAATGGCAGGATGACCTTCAGCAACAGAGAGCTGACTGGGAGAATGTGAATAATGTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| CDS TCA 72 bp | ACATTATTCACATTCTCCCAGTCAGCTCTCTGTTGCTaGAGGTCATCCTGCCATTCATCACATCTTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TLFTFSQSALCC*RSSCHSSHLFS Trigger: TGAGAAAAGATGTGATGAATGGCAGGATGACCTTCAGCAACAGAGAGCTGACTGGGAGAATGTGAATAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106831.3 |
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| CDS CAA 72 bp | GGAATGGACTTGAACCCCTTGAGCCTCTCAACTATATaGGCCATTTGTCGATTAGTTCTCAGATTCCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: GMDLNPLSLSTI*AICRLVLRFPN Trigger: ATTTGGGAATCTGAGAACTAATCGACAAATGGCCAATATAGTTGAGAGGCTCAAGGGGTTCAAGTCCATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106831.3 ENSMUST00000164410.2 |
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