Pregenerated sensors for TRIM30A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030921Ensembl transcript IDs: ENSMUST00000076922.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACGAATCCCTGGCTTCTATCTCTGGCAACACCAAAAAGAAGGTGTaGATACCGTTGTGGGCCTATGTAGTTCTGTCTGTAAGATCTGGG | + |
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Preference number: 1 (lower is better) Translates to: HESLASISGNTKKKV*IPLWAYVVLSVRSG Trigger: CCCAGATCTTACAGACAGAACTACATAGGCCCACAACGGTATGCACACCTTCTTTTTGGTGTTGCCAGAGATAGAAGCCAGGGATTCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR TCA 90 bp | CTCTCAGAGCTGGCTGCTTCCTTCAGCCAAGAGGGTCTAAGTAAATaGACACAGTTCATCACTCACAGAGGAAAGGGCTTTTACTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LSELAASFSQEGLSK*TQFITHRGKGFYSQ Trigger: CTGAGAGTAAAAGCCCTTTCCTCTGTGAGTGATGAACTGTGTTCATTTACTTAGACCCTCTTGGCTGAAGGAAGCAGCCAGCTCTGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR TCA 90 bp | TCTCATTTGTATGAGTTTCAGCCTAGATGTTCTGTAGCATATTTGTaGAGTAAGATGATCATCTCTCAGAGCTGGCTGCTTCCTTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SHLYEFQPRCSVAYL*SKMIISQSWLLPSA Trigger: GGCTGAAGGAAGCAGCCAGCTCTGAGAGATGATCATCTTACTTCACAAATATGCTACAGAACATCTAGGCTGAAACTCATACAAATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR GCA 90 bp | AACAAGAGTAAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTaGAGGAGGCACAAAATCACATCCAAAGCAATCCAGGGAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: NKSKQILQIECRCSF*RRHKITSKAIQGTK Trigger: TTTTGTTCCCTGGATTGCTTTGGATGTGATTTTGTGCCTCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTTACTCTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTGGAGGCACTCACGAATCCCTaGCTTCTATCTCTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: GEELSLSFFSFRKNAAVEALTNP*LLSLAT Trigger: TGTTGCCAGAGATAGAAGCCAGGGATTCGTGAGTGC...CTCCACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CCA 90 bp | CACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTGCAGACCTTAAAGAATaGGGGGACTACAGCCTGATG | + |
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Preference number: 2 (lower is better) Translates to: HWRRTFSQLFQFQKECSCADLKE*GDYSLM Trigger: CATCAGGCTGTAGTCCCCCCATTCTTTAAGGTCTGC...ACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CCA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATATCATCTCTCAGAGCTaGCTGCTTCCTTCAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: NILGGSFQDLISRHEKIYIISQS*LLPSAK Trigger: CTTGGCTGAAGGAAGCAGCCAGCTCTGAGAGATGAT...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTGGAGAAAAAGAAGTTAGAATaGTGCAAGGGGTTTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GEELSLSFFSFRKNAAVEKKKLE*CKGFLA Trigger: TGCAAGAAACCCCTTGCATCATTCTAACTTCTTTTT...CTCCACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR GCA 90 bp | ACACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTGCAGATGTTCTTTTTaGAGGAGGCACAAAATCACA | + |
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Preference number: 2 (lower is better) Translates to: TLEKNFLSAFSVSERMQLCRCSF*RRHKIT Trigger: TGTGATTTTGTGCCTCCTGCAAAAAGAACATCTGCA...CAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR TCA 90 bp | CCAACAAGAGTAAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGAACTGGATCAAGGAAATaGATCTACAGTGGTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PTRVNRSYKLNADVLFAGTGSRK*IYSGLG Trigger: CCCCAAACCACTGTAGATTCATTTCCTTGATCCAGT...TCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTTACTCTTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CCA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATGAACAGACAAGCAACTaGATCAAGGAAATGAATCTA | + |
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Preference number: 2 (lower is better) Translates to: NILGGSFQDLISRHEKIYEQTSN*IKEMNL Trigger: TAGATTCATTTCCTTGATCCAGTTGCTTGTCTGTTC...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CCA 90 bp | CCAACAAGAGTAAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGACTCTTTCTTTTTCTCTaGGGCTTCTCTTACAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PTRVNRSYKLNADVLFAGLFLFL*GFSYRS Trigger: GGACCTGTAAGAGAAGCCCCAGAGAAAAAGAAAGAG...TCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTTACTCTTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CCA 90 bp | AATAACATAGTCTCCTCTCATTTGTATGAGTTTCAGCCTAGATGTTCTGTAGCAAAGATACACCAGACATaGGGGCACTGTATAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: NNIVSSHLYEFQPRCSVAKIHQT*GHCIKI Trigger: TATCTTTATACAGTGCCCCCATGTCTGGTGTATCTT...TGCTACAGAACATCTAGGCTGAAACTCATACAAATGAGAGGAGACTATGTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CCA 90 bp | AATAACATAGTCTCCTCTCATTTGTATGAGTTTCAGCCTAGATGTTCTGTAGCATCCTTGCACAGGAATTaGATCTATAGCTATGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NNIVSSHLYEFQPRCSVASLHRN*IYSYVL Trigger: CAGAACATAGCTATAGATCCAATTCCTGTGCAAGGA...TGCTACAGAACATCTAGGCTGAAACTCATACAAATGAGAGGAGACTATGTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR TCA 90 bp | AAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGAGGCACAAAATCACAGTAATCATCTTGTaGACAGACAAGCAACTGGAT | + |
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Preference number: 2 (lower is better) Translates to: KQILQIECRCSFCRRHKITVIIL*TDKQLD Trigger: ATCCAGTTGCTTGTCTGTTCACAAGATGATTACTGT...GATTTTGTGCCTCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR TCA 90 bp | AATAACATAGTCTCCTCTCATTTGTATGAGTTTCAGCCTAGATGTTCTGTAGCACATGAGTCATTCTTTTaGCTGTGTTTCTACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: NNIVSSHLYEFQPRCSVAHESFF*LCFYRD Trigger: ATCTCTGTAGAAACACAGTCAAAAGAATGACTCATG...TGCTACAGAACATCTAGGCTGAAACTCATACAAATGAGAGGAGACTATGTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR TCA 90 bp | AATAACATAGTCTCCTCTCATTTGTATGAGTTTCAGCCTAGATGTTCTGTAGCATCAGAATTTGTACATTaGGGCCAGCATTCAGTATAT | + |
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Preference number: 2 (lower is better) Translates to: NNIVSSHLYEFQPRCSVASEFVH*GQHSVY Trigger: ATATACTGAATGCTGGCCTCAATGTACAAATTCTGA...TGCTACAGAACATCTAGGCTGAAACTCATACAAATGAGAGGAGACTATGTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR CCA 72 bp | CTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTaGAGACCTGACAGAGCTGAGGCAAGTAACTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LSAFSVSERMQL*RPDRAEASNSG Trigger: CCCTGAGTTACTTGCCTCAGCTCTGTCAGGTCTCCACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR CCA 72 bp | ACTCATAAGCACTCACGAATCCCTGGCTTCTATCTCTaGCAACACCAAAAAGAAGGTGTGCATACCGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: THKHSRIPGFYL*QHQKEGVHTVV Trigger: CACAACGGTATGCACACCTTCTTTTTGGTGTTGCCAGAGATAGAAGCCAGGGATTCGTGAGTGCTTATGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR TCA 72 bp | TCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATaGGAAGATCTATACCTTAGTTTCCTCAGTGCCACA | + |
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Preference number: 3 (lower is better) Translates to: SWRQLPGSNIQT*EDLYLSFLSAT Trigger: TGTGGCACTGAGGAAACTAAGGTATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR GCA 72 bp | AGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATaGAGCTGTGGAGACCTGACAGAGCTGAGGCAAGTA | + |
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Preference number: 3 (lower is better) Translates to: RTFSQLFQFQKE*SCGDLTELRQV Trigger: TACTTGCCTCAGCTCTGTCAGGTCTCCACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR TCA 72 bp | CATCTTGTGAACAGACAAGCAACTGGATCAAGGAAATaGATCTACAGTGGTTTGGGGTTAGAAGTGAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: HLVNRQATGSRK*IYSGLGLEVKV Trigger: GACCTTCACTTCTAACCCCAAACCACTGTAGATTCATTTCCTTGATCCAGTTGCTTGTCTGTTCACAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR TCA 72 bp | GGCTTCTCTTACAGGTCCCTAAGACATTGTTCACCATaGGTCATTCTTTTGACTGTGTTTCTACAGAGATGG | + |
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Preference number: 3 (lower is better) Translates to: GFSYRSLRHCSP*VILLTVFLQRW Trigger: CCATCTCTGTAGAAACACAGTCAAAAGAATGACTCATGGTGAACAATGTCTTAGGGACCTGTAAGAGAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR CCA 72 bp | TTGAGGCCAGCATTCAGTATATCCTTGCACAGGAATTaGATCTATAGCTATGTTCTGACATCCAACAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: LRPAFSISLHRN*IYSYVLTSNKS Trigger: ACTCTTGTTGGATGTCAGAACATAGCTATAGATCCAATTCCTGTGCAAGGATATACTGAATGCTGGCCTCAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR TCA 72 bp | GATCAAGGCACAAGTCCATATTCAGAATTTGTACATTaGGGCCAGCATTCAGTATATCCTTGCACAGGAATT | + |
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Preference number: 3 (lower is better) Translates to: DQGTSPYSEFVH*GQHSVYPCTGI Trigger: AATTCCTGTGCAAGGATATACTGAATGCTGGCCTCAATGTACAAATTCTGAATATGGACTTGTGCCTTGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR TCA 72 bp | TATGAGTTTCAGCCTAGATGTTCTGTAGCATATTTGTaGAGTAAGATGATCATCTCTCAGAGCTGGCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: YEFQPRCSVAYL*SKMIISQSWLL Trigger: AAGCAGCCAGCTCTGAGAGATGATCATCTTACTTCACAAATATGCTACAGAACATCTAGGCTGAAACTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CAA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATCTTAGTGGATATCATTaGAGATGTCTCCTTCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: NILGGSFQDLISRHEKIYLSGYH*RCLLLN Trigger: GTTAAGAAGGAGACATCTCAAATGATATCCACTAAG...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR GCA 72 bp | TACCCAGTAATTAGCACAATCCCCACTTACAGAGTGTaGACTGGACACATTATACCTATTGATCTTTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: YPVISTIPTYRV*TGHIIPIDLFL Trigger: TAAGAAAAGATCAATAGGTATAATGTGTCCAGTGCACACTCTGTAAGTGGGGATTGTGCTAATTACTGGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR-3UTR CAA 90 bp | AATAACATAGTCTCCTCTCATTTGTATGAGTTTCAGCCTAGATGTTCTGTAGCAGCATTCAGTATATCCTaGCACAGGAATTGGATCTAT | + |
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Preference number: 3 (lower is better) Translates to: NNIVSSHLYEFQPRCSVAAFSIS*HRNWIY Trigger: ATAGATCCAATTCCTGTGCAAGGATATACTGAATGC...TGCTACAGAACATCTAGGCTGAAACTCATACAAATGAGAGGAGACTATGTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATGTTCCACATCTGAGATaGGGTCTCTCACCAACTCTG | + |
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Preference number: 4 (lower is better) Translates to: NILGGSFQDLISRHEKIYVPHLR*GLSPTL Trigger: CAGAGTTGGTGAGAGACCTCATCTCAGATGTGGAAC...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | ACACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTGCAGGCTTAAGGACTaGCTCCTTCTCAGGACACAA | + |
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Preference number: 4 (lower is better) Translates to: TLEKNFLSAFSVSERMQLCRLKD*LLLRTQ Trigger: TTGTGTCCTGAGAAGGAGTCAGTCCTTAAGCCTGCA...CAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR GCA 90 bp | CCAAAGCAATCCAGGGAACAAAATGTCCCTGAGGTTAAAGGCCCTCTTTCTTTTCATAAAATGAGAGAGTaGCAGCTTTCCGATCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PKQSREQNVPEVKGPLSFHKMRE*QLSDPG Trigger: TCCTGGATCGGAAAGCTGGCACTCTCTCATTTTATG...AAAAGAAAGAGGGCCTTTAACCTCAGGGACATTTTGTTCCCTGGATTGCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CCA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATGCTCCTCATTCTCCTTaGAGTCCAGGAGGTCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: NILGGSFQDLISRHEKIYAPHSP*SPGGLL Trigger: TAAGAGACCTCCTGGACTCCAAGGAGAATGAGGAGC...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATACTCATAATTCAGTGTaGTGCAGGCTCTGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: NILGGSFQDLISRHEKIYTHNSV*CRLCRS Trigger: GCTTCTGCAGAGCCTGCATCACACTGAATTATGAGT...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | ACACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGGATCAGGCAGAGAGATaGCCAGGATACTGGAATTGT | + |
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Preference number: 4 (lower is better) Translates to: TLEKNFLSAFSVSERMQLDQAER*PGYWNC Trigger: ACAATTCCAGTATCCTGGTCATCTCTCTGCCTGATC...CAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | CCAAAGCAATCCAGGGAACAAAATGTCCCTGAGGTTAAAGGCCCTCTTTCTTTTAGAAACATCATAAAATaGGAGAGTGCCAGCTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PKQSREQNVPEVKGPLSFRNIIK*ESASFP Trigger: CGGAAAGCTGGCACTCTCTCATTTTATGATGTTTCT...AAAAGAAAGAGGGCCTTTAACCTCAGGGACATTTTGTTCCCTGGATTGCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR GCA 90 bp | ACACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTTCCACAGAGCTCCCTaGAGCTTCTCCTTGTATTCT | + |
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Preference number: 4 (lower is better) Translates to: TLEKNFLSAFSVSERMQLFHRAP*SFSLYS Trigger: AGAATACAAGGAGAAGCTGCAGGGAGCTCTGTGGAA...CAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTGGAGGATACACTTGCAGCATaGCTTTCAGATCTGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GEELSLSFFSFRKNAAVEDTLAA*LSDLEL Trigger: AAGCTCCAGATCTGAAAGGCATGCTGCAAGTGTATC...CTCCACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATGTTGAGAGCTCCAAATaGTGTTCCACATCTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: NILGGSFQDLISRHEKIYVESSK*CSTSEM Trigger: CATCTCAGATGTGGAACATCATTTGGAGCTCTCAAC...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR GCA 90 bp | CACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTTCTTTCTTCAGCTTCTaGAGCTCCTCATTCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HWRRTFSQLFQFQKECSCSFFSF*SSSFSL Trigger: CAAGGAGAATGAGGAGCTGCAGAAGCTGAAGAAAGA...ACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CCA 90 bp | CCAAAGCAATCCAGGGAACAAAATGTCCCTGAGGTTAAAGGCCCTCTTTCTTTTACATTGATCTGTATTTaGTTCTCCCAGTCAACTCTC | + |
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Preference number: 4 (lower is better) Translates to: PKQSREQNVPEVKGPLSFTLICI*FSQSTL Trigger: GAGAGTTGACTGGGAGAACCAAATACAGATCAATGT...AAAAGAAAGAGGGCCTTTAACCTCAGGGACATTTTGTTCCCTGGATTGCTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CCA 90 bp | AATAACATAGTCTCCTCTCATTTGTATGAGTTTCAGCCTAGATGTTCTGTAGCATTTTGGGGGACAGTTTaGGGCTGTTGCAGGCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: NNIVSSHLYEFQPRCSVAFWGTV*GCCRLK Trigger: CTTAAGCCTGCAACAGCCCCAAACTGTCCCCCAAAA...TGCTACAGAACATCTAGGCTGAAACTCATACAAATGAGAGGAGACTATGTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | CCAAAGCAATCCAGGGAACAAAATGTCCCTGAGGTTAAAGGCCCTCTTTCTTTTGAACATTTTCTACATTaGTCTGTATTTGGTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PKQSREQNVPEVKGPLSFEHFLH*SVFGSP Trigger: GGGAGAACCAAATACAGATCAATGTAGAAAATGTTC...AAAAGAAAGAGGGCCTTTAACCTCAGGGACATTTTGTTCCCTGGATTGCTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR GCA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATTTTCTCTCCATGTTGTaGACAGATATTCACCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: NILGGSFQDLISRHEKIYFLSML*TDIHLL Trigger: CAGAAGGTGAATATCTGTGCACAACATGGAGAGAAA...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CCA 90 bp | CACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTCATGCCTTTCAGATCTaGAGCTTGGAATGTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HWRRTFSQLFQFQKECSCHAFQI*SLECSF Trigger: AAAAGAACATTCCAAGCTCCAGATCTGAAAGGCATG...ACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | AAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGAGGCACAAAATCATGATGTTCCACATCTaGGATGAGGTCTCTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: KQILQIECRCSFCRRHKIMMFHI*DEVSHQ Trigger: TTGGTGAGAGACCTCATCTCAGATGTGGAACATCAT...GATTTTGTGCCTCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR TCA 90 bp | CCAACAAGAGTAAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGAATTGCTGGATATCCATaGGTCCTTGATACACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: PTRVNRSYKLNADVLFAGIAGYP*VLDTLA Trigger: TGCAAGTGTATCAAGGACTCATGGATATCCAGCAAT...TCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTTACTCTTGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| 3UTR CAA 72 bp | AAAAATGAGATCAAGGCACAAGTCCATATTCAGAATTaGTACATTGAGGCCAGCATTCAGTATATCCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: KNEIKAQVHIQN*YIEASIQYILA Trigger: TGCAAGGATATACTGAATGCTGGCCTCAATGTACAAATTCTGAATATGGACTTGTGCCTTGATCTCATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CCA 90 bp | AAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGAGGCACAAAATCTTCTCCTTGTATTCTTaGTCAACCTCTTCAATGAGA | + |
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Preference number: 4 (lower is better) Translates to: KQILQIECRCSFCRRHKIFSLYS*STSSMR Trigger: TCTCATTGAAGAGGTTGACCAAGAATACAAGGAGAA...GATTTTGTGCCTCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS TCA 90 bp | AGTTGCCCTTCCCGTCTGTGTTTCTGTTGGACTCATAATTCAGTGTaGTGCAGGCTCTGCAGAAGCTGTGGTTACAATCAGCACTCACAG | + |
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Preference number: 5 (lower is better) Translates to: SCPSRLCFCWTHNSV*CRLCRSCGYNQHSQ Trigger: CTGTGAGTGCTGATTGTAACCACAGCTTCTGCAGAGCCTGCATCACACTGAATTATGAGTCCAACAGAAACACAGACGGGAAGGGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | AATATTCTTGGCGGCAGCTTCCAGGATCTAATATCCAGACATGAGAAGATCTATTTCAATGAGAGCTGTTaGGTGACCACGGTGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: NILGGSFQDLISRHEKIYFNESC*VTTVLL Trigger: CAGGAGCACCGTGGTCACCAAACAGCTCTCATTGAA...ATAGATCTTCTCATGTCTGGATATTAGATCCTGGAAGCTGCCGCCAAGAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | CCAAAGCAATCCAGGGAACAAAATGTCCCTGAGGTTAAAGGCCCTCTTTCTTTTGAGTCCTTGATACACTaGCAGCATGCCTTTCAGATC | + |
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Preference number: 5 (lower is better) Translates to: PKQSREQNVPEVKGPLSFESLIH*QHAFQI Trigger: GATCTGAAAGGCATGCTGCAAGTGTATCAAGGACTC...AAAAGAAAGAGGGCCTTTAACCTCAGGGACATTTTGTTCCCTGGATTGCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | AAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGAGGCACAAAATCAGCTCCTCATTCTCCTaGGAGTCCAGGAGGTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: KQILQIECRCSFCRRHKISSSFS*ESRRSL Trigger: AAGAGACCTCCTGGACTCCAAGGAGAATGAGGAGCT...GATTTTGTGCCTCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | ACACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGCACTCATCAAAGGCCTaGTATACAGACGGATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TLEKNFLSAFSVSERMQLHSSKA*YTDGFF Trigger: GAAGAATCCGTCTGTATACAAGGCCTTTGATGAGTG...CAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | CACTGGAGAAGAACTTTCTCTCAGCTTTTTCAGTTTCAGAAAGAATGCAGCTGTACCAGGATACTGGAATaGTGGGTGATAGAACACTCA | + |
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Preference number: 5 (lower is better) Translates to: HWRRTFSQLFQFQKECSCTRILE*WVIEHS Trigger: TGAGTGTTCTATCACCCACAATTCCAGTATCCTGGT...ACAGCTGCATTCTTTCTGAAACTGAAAAAGCTGAGAGAAAGTTCTTCTCCAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | CCAACAAGAGTAAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGACCCTGCAGCTTCTCCTaGTATTCTTGGTCAACCTCT | + |
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Preference number: 5 (lower is better) Translates to: PTRVNRSYKLNADVLFAGPCSFS*YSWSTS Trigger: AGAGGTTGACCAAGAATACAAGGAGAAGCTGCAGGG...TCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTTACTCTTGTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | CCAACAAGAGTAAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGACTTCTCCTTGTATTCTaGGTCAACCTCTTCAATGAG | + |
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Preference number: 5 (lower is better) Translates to: PTRVNRSYKLNADVLFAGLLLVF*VNLFNE Trigger: CTCATTGAAGAGGTTGACCAAGAATACAAGGAGAAG...TCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTTACTCTTGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | AAACAGATCTTACAAATTGAATGCAGATGTTCTTTTTGCAGGAGGCACAAAATCTACATTGATCTGTATTaGGTTCTCCCAGTCAACTCT | + |
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Preference number: 5 (lower is better) Translates to: KQILQIECRCSFCRRHKIYIDLY*VLPVNS Trigger: AGAGTTGACTGGGAGAACCAAATACAGATCAATGTA...GATTTTGTGCCTCCTGCAAAAAGAACATCTGCATTCAATTTGTAAGATCTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS-3UTR CAA 90 bp | AATAACATAGTCTCCTCTCATTTGTATGAGTTTCAGCCTAGATGTTCTGTAGCATTTCAGATCTGGAGCTaGGAATGTTCTTTTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: NNIVSSHLYEFQPRCSVAFQIWS*ECSFSL Trigger: AAGAGAAAAAGAACATTCCAAGCTCCAGATCTGAAA...TGCTACAGAACATCTAGGCTGAAACTCATACAAATGAGAGGAGACTATGTTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS GCA 72 bp | TCCCAAATGGGTAAGGAACTCGGCATACAGGGCAGTTaGCCTTCCCGTCTGTGTTTCTGTTGGACTCATAAT | + |
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Preference number: 6 (lower is better) Translates to: SQMGKELGIQGS*PSRLCFCWTHN Trigger: ATTATGAGTCCAACAGAAACACAGACGGGAAGGGCAACTGCCCTGTATGCCGAGTTCCTTACCCATTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 72 bp | GCAGGCTTAAGGACTGACTCCTTCTCAGGACACAATTaGCACCCTGCAGCATTTCTAAGGTTGAGAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: AGLRTDSFSGHN*HPAAFLRLRAP Trigger: TGGAGCTCTCAACCTTAGAAATGCTGCAGGGTGCAAATTGTGTCCTGAGAAGGAGTCAGTCCTTAAGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 90 bp | GGGGCTGTTGCAGGCTTAAGGACTGACTCCTTCTCAGGACACAATTaGCACCCTGCAGCATTTCTAAGGTTGAGAGCTCCAAATGATGTT | + |
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Preference number: 6 (lower is better) Translates to: GAVAGLRTDSFSGHN*HPAAFLRLRAPNDV Trigger: AACATCATTTGGAGCTCTCAACCTTAGAAATGCTGCAGGGTGCAAATTGTGTCCTGAGAAGGAGTCAGTCCTTAAGCCTGCAACAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 90 bp | ACACGACTGGGACGATCAGGCAGAGAGATGACCAGGATACTGGAATaGTGGGTGATAGAACACTCATCAAAGGCCTTGTATACAGACGGA | + |
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Preference number: 6 (lower is better) Translates to: TRLGRSGREMTRILE*WVIEHSSKALYTDG Trigger: TCCGTCTGTATACAAGGCCTTTGATGAGTGTTCTATCACCCACAATTCCAGTATCCTGGTCATCTCTCTGCCTGATCGTCCCAGTCGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 90 bp | CAACTCTCTGCAGTTGAAGGTCATCCTGCCATTCATCACATATTTTaGCCTTTTTCATCAGCTTCCACAGAGCTCCCTGCAGCTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QLSAVEGHPAIHHIF*PFSSASTELPAASP Trigger: AGGAGAAGCTGCAGGGAGCTCTGTGGAAGCTGATGAAAAAGGCAAAAATATGTGATGAATGGCAGGATGACCTTCAACTGCAGAGAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS TCA 72 bp | TCCCGTCTGTGTTTCTGTTGGACTCATAATTCAGTGTaGTGCAGGCTCTGCAGAAGCTGTGGTTACAATCAG | + |
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Preference number: 6 (lower is better) Translates to: SRLCFCWTHNSV*CRLCRSCGYNQ Trigger: CTGATTGTAACCACAGCTTCTGCAGAGCCTGCATCACACTGAATTATGAGTCCAACAGAAACACAGACGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 72 bp | TTCATCAGCTTCCACAGAGCTCCCTGCAGCTTCTCCTaGTATTCTTGGTCAACCTCTTCAATGAGAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FISFHRAPCSFS*YSWSTSSMRAV Trigger: AACAGCTCTCATTGAAGAGGTTGACCAAGAATACAAGGAGAAGCTGCAGGGAGCTCTGTGGAAGCTGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 72 bp | GGACGATCAGGCAGAGAGATGACCAGGATACTGGAATaGTGGGTGATAGAACACTCATCAAAGGCCTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: GRSGREMTRILE*WVIEHSSKALY Trigger: ATACAAGGCCTTTGATGAGTGTTCTATCACCCACAATTCCAGTATCCTGGTCATCTCTCTGCCTGATCGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CCA 72 bp | ATGTTGTGCACAGATATTCACCTTCTGCTCCTCCTCTaGAATGGACTTGAATCCCTTGAGCCTCTCTACTAT | + |
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Preference number: 6 (lower is better) Translates to: MLCTDIHLLLLL*NGLESLEPLYY Trigger: ATAGTAGAGAGGCTCAAGGGATTCAAGTCCATTCCAGAGGAGGAGCAGAAGGTGAATATCTGTGCACAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 72 bp | GGAATGGACTTGAATCCCTTGAGCCTCTCTACTATGTaGGCCACATGTAGATTAGGCCTCAGATTCCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: GMDLNPLSLSTM*ATCRLGLRFPN Trigger: ATTTGGGAATCTGAGGCCTAATCTACATGTGGCCAACATAGTAGAGAGGCTCAAGGGATTCAAGTCCATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 72 bp | GCAGTTGAAGGTCATCCTGCCATTCATCACATATTTTaGCCTTTTTCATCAGCTTCCACAGAGCTCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AVEGHPAIHHIF*PFSSASTELPA Trigger: TGCAGGGAGCTCTGTGGAAGCTGATGAAAAAGGCAAAAATATGTGATGAATGGCAGGATGACCTTCAACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS TCA 72 bp | ATAGATGAGAGCACCGCAGTTAGAAACATCATAAAATaGGAGAGTGCCAGCTTTCCGATCCAGGAAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: IDESTAVRNIIK*ESASFPIQENS Trigger: GGAGTTTTCCTGGATCGGAAAGCTGGCACTCTCTCATTTTATGATGTTTCTAACTGCGGTGCTCTCATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 72 bp | GATCTGTATTTGGTTCTCCCAGTCAACTCTCTGCAGTaGAAGGTCATCCTGCCATTCATCACATATTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: DLYLVLPVNSLQ*KVILPFITYFC Trigger: GCAAAAATATGTGATGAATGGCAGGATGACCTTCAACTGCAGAGAGTTGACTGGGAGAACCAAATACAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CAA 90 bp | CATATGAACCCAGTATTGCTGGATATCCATGAGTCCTTGATACACTaGCAGCATGCCTTTCAGATCTGGAGCTTGGAATGTTCTTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: HMNPVLLDIHESLIH*QHAFQIWSLECSFS Trigger: AGAAAAAGAACATTCCAAGCTCCAGATCTGAAAGGCATGCTGCAAGTGTATCAAGGACTCATGGATATCCAGCAATACTGGGTTCATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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| CDS CCA 72 bp | ATATCCCAGGACACCCAAATGGTAGATCTCAGAAACTaGAACCGTATTGTAACTTCTATACTGTATTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ISQDTQMVDLRN*NRIVTSILYLS Trigger: AGACAAATACAGTATAGAAGTTACAATACGGTTCCAGTTTCTGAGATCTACCATTTGGGTGTCCTGGGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076922.6 |
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