Pregenerated sensors for TRIM28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005566Ensembl transcript IDs: ENSMUST00000005705.8
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGAGACCAGAGCTGGACTaGGCTGACCACAAGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: EGLRGRWGQQEQESGHQRRPELD*ADHKSP Trigger: GGGGCTCTTGTGGTCAGCCCAGTCCAGCTCTGGTCT...CCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGTACAGAGACCAGAGCTaGACTGGGCTGACCACAAGA | + |
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Preference number: 2 (lower is better) Translates to: EGLRGRWGQQEQESGHQRYRDQS*TGLTTR Trigger: TCTTGTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTA...CCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGGCCCTCGCCCGACCCTaGGCTACCAGAGGCCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LRGRWGQQEQESGHQRTGALARP*ATRGRR Trigger: TCGGCGGCCTCTGGTAGCCCAGGGTCGGGCGAGGGC...CCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | TGTGAAGAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACAGAGGCCGCCGCGGCTaGGGAAGCAGCCGGACGCTT | + |
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Preference number: 4 (lower is better) Translates to: CEEGLRGRWGQQEQESGHRGRRG*GSSRTL Trigger: AAGCGTCCGGCTGCTTCCTCAGCCGCGGCGGCCTCT...GTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTCTTCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACGGCACAGTCCCAGCCTaGCCAGCAGCTGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDGTVPA*PAAAAA Trigger: TGCTGCAGCAGCTGCTGGTCAGGCTGGGACTGTGCC...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACCACCACCTCCAAGCCTaGGCTGGTACTGCCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDHHLQA*AGTATR Trigger: CCTAGTGGCAGTACCAGCTCAGGCTTGGAGGTGGTG...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGCCCACTTACTGGGGCTaGGGTAACCTCAGGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LRGRWGQQEQESGHQRTGPTYWG*GNLRSH Trigger: GTGGCTCCTGAGGTTACCTCAGCCCCAGTAAGTGGG...CCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR GCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGGCCCAGGCAGGCACTaGAGGCCGAATGTAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRGPGRH*RPNVDR Trigger: CCTGTCTACATTCGGCCTGCAGTGCCTGCCTGGGCC...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACCCTTCTGGGCATCATTaGCCAGAACTCGACCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDPSGHH*PELDPA Trigger: AGCGGGGTCGAGTTCTGGTCAATGATGCCCAGAAGG...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGGCTGGCTGTCAGAGGTaGGGTCCAGATCCAGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMAGCQR*GPDPGV Trigger: AACGCCTGGATCTGGACCTCACCTCTGACAGCCAGC...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | TGTGAAGAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACGAGTCGGTAGCCAGCTaGTGCAAGGGACGGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: CEEGLRGRWGQQEQESGHESVAS*CKGRHG Trigger: ACCATGCCGTCCCTTGCATCAGCTGGCTACCGACTC...GTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTCTTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR GCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGTCCCCTGGAACATCCTaGAGGGCAGGGAGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMSPGTS*RAGRWQ Trigger: TTGCCACCTCCCTGCCCTGCAGGATGTTCCAGGGGA...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGGTCATGGTCCAGTGCTaGCGCTCCAGACGTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMVMVQC*RSRRSC Trigger: GCAGGAACGTCTGGAGCGCCAGCACTGGACCATGAC...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGCTCTTGGAGGAGCCATaGGCCCAGGACCTGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRLLEEP*AQDLWS Trigger: ACTCCACAGGTCCTGGGCCCATGGCTCCTCCAAGAG...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACGGCACCAGGGGCTCCTaGTGGCACAGTCCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHGTRGS*WHSPSL Trigger: CAGGCTGGGACTGTGCCACCAGGAGCCCCTGGTGCC...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACTATTTCACCCGCTGGTaGGCCTCCACACAGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDYFTRW*ASTQVS Trigger: TGAGACCTGTGTGGAGGCTCACCAGCGGGTGAAATA...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGCCGCTGGTTGGCTGGTaGGAGTTTAGCTACCACACC | + |
|
Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRPLVGW*EFSYHT Trigger: GGTGTGGTAGCTAAACTCTCACCAGCCAACCAGCGG...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGGGAGCTATAAGGAGGTaGCAGCTTCTCTTGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRGRWGQQEQESGHQRTGGAIRR*QLLLEA Trigger: CGCCTCCAAGAGAAGCTGTCACCTCCTTATAGCTCC...CCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGCGCTGCAAGCCGATaGTGGACTGAACATCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDSAASR*WTEHLP Trigger: AGGCAGATGTTCAGTCCATCATCGGCTTGCAGCGCT...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR GCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGTGCCAGAACCTTGCTTaGTTAGAGGGCCTGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRCQNLA*LEGLGL Trigger: GAGCCCCAGGCCCTCTAAGCAAGCAAGGTTCTGGCA...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR GCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGCTGACCAGCAGCTGCTaGAGCAGCACCACGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRLTSSC*SSTTLN Trigger: ATTGAGCGTGGTGCTGCTGCAGCAGCTGCTGGTCAG...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR GCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACCACACCAGTGCTATCTaGTCCATCCAGGCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDHTSAI*SIQAEA Trigger: AGCCTCAGCCTGGATGGAGCAGATAGCACTGGTGTG...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGAGGGCCTGGGGCTCTTaGAGGAGCCATGGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RPPKDRVWGENTETRAGLRAWGS*RSHGPR Trigger: CCTGGGCCCATGGCTCCTCCAAGAGCCCCAGGCCCT...CAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACACCAGGGGCTCCTGGTaGCACAGTCCCAGCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHTRGSW*HSPSLT Trigger: GGTCAGGCTGGGACTGTGCCACCAGGAGCCCCTGGT...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | CCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCGGCAGTCGCGGCAGGTaGGTGTGTCACAGCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: PPKDRVWGENTETRAGLGGSRGR*VCHSSH Trigger: GTGAGAGCTGTGACACACTCACCTGCCGCGACTGCC...GCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGTTCCAGGAAAGACCTTaGAGACTGGTGGCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EGLRGRWGQQEQESGHQRFQERP*RLVAGC Trigger: ACAGCCAGCCACCAGTCTTCAAGGTCTTTCCTGGAA...CCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR GCA 90 bp | AGGCCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGCGACACACGCCGCAGTaGTCCAGAAGCTCCTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: RPPKDRVWGENTETRAGLRHTPQ*SRSSCA Trigger: GGCGCAGGAGCTTCTGGAGCACTGCGGCGTGTGTCG...CAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACGTGGAGCGCACAGTGTaGTCCTTGGTGTATTTCACC | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDVERTV*SLVYFT Trigger: GGTGAAATACACCAAGGACCACACTGTGCGCTCCAC...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACCCTCTTGTACTTCCATaGGCTGGCTACTGCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDPLVLP*AGYCQN Trigger: GTTCTGGCAGTAGCCAGCCCATGGAAGTACAAGAGG...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | TGTGAAGAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACTTGAAGACTGGTGGCTaGCTGTCAGAGGTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CEEGLRGRWGQQEQESGHLKTGG*LSEVRS Trigger: GGACCTCACCTCTGACAGCCAGCCACCAGTCTTCAA...GTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTCTTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGAGGTCACCTGGTTTCTaGCAGACACGGCAGATAGTG | + |
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Preference number: 4 (lower is better) Translates to: LRGRWGQQEQESGHQRTGRSPGF*QTRQIV Trigger: CACTATCTGCCGTGTCTGCCAGAAACCAGGTGACCT...CCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGCATGACCAGGTCACCTaGTTTCTGGCAGACACGGCA | + |
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Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMHDQVT*FLADTA Trigger: TGCCGTGTCTGCCAGAAACCAGGTGACCTGGTCATG...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACTCCAGACGTTCCTGCTaGCCCTCGGTCACCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHSRRSC*PSVTFW Trigger: CCAGAAGGTGACCGAGGGTCAGCAGGAACGTCTGGA...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGGATCCACAATCATTTTaGGGGCCCGATGCAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMDPQSF*GPDAAG Trigger: TCCAGCTGCATCGGGCCCTCAAAATGATTGTGGATC...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | TGTGAAGAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCGCACTGGTTACACATaGCCAGGTCACCTGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: CEEGLRGRWGQQEQESGHRTGYT*PGHLVS Trigger: AGAAACCAGGTGACCTGGTCATGTGTAACCAGTGCG...GTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTCTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGGCACAGTGTGGTCCTTaGTGTATTTCACCCGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMAQCGP*CISPAG Trigger: ACCAGCGGGTGAAATACACCAAGGACCACACTGTGC...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACGGTGCTTCTGAATTTTaGTCATGGTCCAGTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDGASEF*SWSSAG Trigger: GCCAGCACTGGACCATGACCAAAATTCAGAAGCACC...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGAACTTCATCTCACCATaGGGCTCCACAGGATCCACA | + |
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Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRNFISP*GSTGST Trigger: TGTGGATCCTGTGGAGCCTCATGGTGAGATGAAGTT...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACTCTTGGTCCAGGCATTaGGATCCCACTGAAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDSWSRH*DPTETS Trigger: TGAAGTTTCAGTGGGATCTCAATGCCTGGACCAAGA...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACCTGCTCCATCCAGGCTaGGGCTTCCATCTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHLLHPG*GFHLPP Trigger: AGGAGGAAGATGGAAGCCTCAGCCTGGATGGAGCAG...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR GCA 90 bp | TGTGAAGAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACGCTCAGCCACAATCTTaGCAAAGGCTTCAGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: CEEGLRGRWGQQEQESGHAQPQS*QRLQHS Trigger: AGAGTGCTGAAGCCTTTGGCAAGATTGTGGCTGAGC...GTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTCTTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGGCCAAGAGTTTACGTTaGTTCCTCACTGCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LRGRWGQQEQESGHQRTGAKSLR*FLTASS Trigger: GGAAGATGCAGTGAGGAACCAACGTAAACTCTTGGC...CCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGTCTGAATTTTGGTCATaGTCCAGTGCTGGCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMSEFWS*SSAGAP Trigger: TGGAGCGCCAGCACTGGACCATGACCAAAATTCAGA...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | TGTGAAGAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACAAAGACCTTGAAGACTaGTGGCTGGCTGTCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: CEEGLRGRWGQQEQESGHKDLED*WLAVRG Trigger: ACCTCTGACAGCCAGCCACCAGTCTTCAAGGTCTTT...GTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTCTTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACGGACGGCATGGTTCATaGCAGAACAGGGCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHGRHGS*QNRARR Trigger: TCTCCTGGCCCTGTTCTGCCATGAACCATGCCGTCC...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTCCTTGGTGTTTTTCTaGAGTGTGGCATGTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRGRWGQQEQESGHQRTGSLVFF*SVACLS Trigger: GGACAAACATGCCACACTTCAGAAAAACACCAAGGA...CCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR TCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGTGTTCCTGGTGCTTCTaGATTTTGGTCATGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMCSWCF*ILVMVQ Trigger: CTGGACCATGACCAAAATTCAGAAGCACCAGGAACA...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGACCTGCACTCGCTTCTaGACATCAGACACCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPPKDRVWGENTETRAGLTCTRF*TSDTWR Trigger: CCGCCAGGTGTCTGATGTGCAGAAGCGAGTGCAGGT...CAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGTTGGTCATGGTCCAGTaGTGGCGCTCCAGACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPPKDRVWGENTETRAGLLVMVQ*WRSRRS Trigger: GGAACGTCTGGAGCGCCAGCACTGGACCATGACCAA...CAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGGATGGACTGAACATCTaGCTTGTCCTCAGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMDGLNI*LVLSQL Trigger: AAGCTGACTGAGGACAAGGCAGATGTTCAGTCCATC...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGTATGTCTCCACGATGTCTTTaGAGTAGCACTGCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GDDGASKNRSQATKGQGMSPRCL*SSTAVC Trigger: GCAAACAGCAGTGCTACTCCAAAGACATCGTGGAGA...CATACCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGCACTGGTTAGCATCCTaGGAATCAGAAGAGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRHWLAS*ESEEAL Trigger: TAAGGCCTCTTCTGATTCCCAGGATGCTAACCAGTG...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACACAGGTCTCACAAAGTaGTTCAGAGCACTCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: CEEGLRGRWGQQEQESGHTGLTK*FRALHT Trigger: TGTGTGGAGTGCTCTGAACCACTTTGTGAGACCTGT...GTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTCTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGCTTCGAACCTCCTTaGTGTTTTTCTGAAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTEGTMGPARTGVRPPKDSFEPP*CFSEVW Trigger: CCACACTTCAGAAAAACACCAAGGAGGTTCGAAGCT...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACGACCTTGAAGACTGGTaGCTGGCTGTCAGAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHDLEDW*LAVRGE Trigger: CTCACCTCTGACAGCCAGCCACCAGTCTTCAAGGTC...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACAGGTCAGGGAGCACGTaGCAGAGTGAGCAACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHRSGST*QSEQLH Trigger: ATGGAGTTGCTCACTCTGCCACGTGCTCCCTGACCT...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGAAGACGTTTCACCAGTaGAGCCAAGAGTTTACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRKTFHQ*SQEFTL Trigger: CAACGTAAACTCTTGGCTTCACTGGTGAAACGTCTT...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGTATTCAGCTCCTTCATaGTCTGCAGAATGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRYSAPS*SAEWPS Trigger: AGATGGCCATTCTGCAGATCATGAAGGAGCTGAATA...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | CCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCCCCTCGGTCACCTTCTaGGCATCATTGACCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PPKDRVWGENTETRAGLGPSVTF*ASLTRT Trigger: AGTTCTGGTCAATGATGCCCAGAAGGTGACCGAGGG...GCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGCACAGCAGAAAACTTaGTGTCACCAAAGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEGTMGPARTGVRPPKDRAQQKT*CHQRHH Trigger: ATGATGCCTTTGGTGACACCAAGTTTTCTGCTGTGC...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR TCA 90 bp | CCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCCTGTCTCTTCTTCCTTaGCAATGGCCATGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPKDRVWGENTETRAGLGLSLLP*QWPCQE Trigger: TTCCTGGCATGGCCATTGTCAAGGAAGAAGAGACAG...GCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR TCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACAAGCCGATGATGGACTaGACATCTGCCTTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHKPMMD*TSALSS Trigger: TGAGGACAAGGCAGATGTTCAGTCCATCATCGGCTT...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | CCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCCGCTCACATTTCCGCTaGTTGGCTGGTGAGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPKDRVWGENTETRAGLGRSHFR*LAGESL Trigger: TAAACTCTCACCAGCCAACCAGCGGAAATGTGAGCG...GCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR GCA 90 bp | CCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCACGTTGGTTCCTCACTaGATCTTCCAAAAACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPKDRVWGENTETRAGLGTLVPH*IFQKLV Trigger: TACCAGTTTTTGGAAGATGCAGTGAGGAACCAACGT...GCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACTGTTTTTCTGAAGTGTaGCATGTTTGTCCCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTGYGVKIQRPELDWADHCFSEV*HVCPQD Trigger: GTCTTGGGGACAAACATGCCACACTTCAGAAAAACA...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | AGCAGCCGGACGCTTCTCACCGCCCGCCGAGCCCTCGCCCGACCCTaGGCTACCAGAGGCCGCCGAGGCGGCCGTCGCGGCCGAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRTLLTARRALARP*ATRGRRGGRRGRGR Trigger: GCGGCCTCGGCCGCGACGGCCGCCTCGGCGGCCTCTGGTAGCCCAGGGTCGGGCGAGGGCTCGGCGGGCGGTGAGAAGCGTCCGGCTGCT 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS GCA 90 bp | CATAGCGCCGTCGCCCGCCGAGCCGCCATCCCCCGAATTATTCGCTaGGGCGGGTGTAGCGGGGCCCAGGCAGGCACTGCAGGCCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: HSAVARRAAIPRIIR*GGCSGAQAGTAGRM Trigger: CATTCGGCCTGCAGTGCCTGCCTGGGCCCCGCTACACCCGCCGCAGCGAATAATTCGGGGGATGGCGGCTCGGCGGGCGACGGCGCTATG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACGAGGGCCTGGGGCTCTaGGAGGAGCCATGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTEGTMGPARTGVRPPKDEGLGL*EEPWAQ Trigger: CTGGGCCCATGGCTCCTCCAAGAGCCCCAGGCCCTC...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | CAGAACCTTGCTTGCTTAGAGGGCCTGGGGCTCTTGGAGGAGCCATaGGCCCAGGACCTGTGGAGTTCGTACCAGGACGCTCAGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: QNLACLEGLGLLEEP*AQDLWSSYQDAQPQ Trigger: TTGTGGCTGAGCGTCCTGGTACGAACTCCACAGGTCCTGGGCCCATGGCTCCTCCAAGAGCCCCAGGCCCTCTAAGCAAGCAAGGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACCGCACAGTGTGGTCCTaGGTGTATTTCACCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTEGTMGPARTGVRPPKDRTVWS*VYFTRW Trigger: CCAGCGGGTGAAATACACCAAGGACCACACTGTGCG...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGACCTTCTGGGCATCATaGACCAGAACTCGACCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRGRWGQQEQESGHQRTGTFWAS*TRTRPR Trigger: GCGGGGTCGAGTTCTGGTCAATGATGCCCAGAAGGT...CCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGGCTTCCAGGAAAGACCTaGAAGACTGGTGGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRGRWGQQEQESGHQRTGLPGKT*KTGGWL Trigger: CAGCCAGCCACCAGTCTTCAAGGTCTTTCCTGGAAG...CCCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | ATAATTCTCCACGATGTCTTTGGAGTAGCACTGCTGTTTGCACACTaGACAATCCACCATAGCGCCGTCGCCCGCCGAGCCGCCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IILHDVFGVALLFAH*TIHHSAVARRAAIP Trigger: GGGGATGGCGGCTCGGCGGGCGACGGCGCTATGGTGGATTGTCCAGTGTGCAAACAGCAGTGCTACTCCAAAGACATCGTGGAGAATTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | TCCAGGCTGAGGCTTCCATCTTCCTCCTTTAGGTCAGGGAGCACGTaGCAGAGTGAGCAACTCCATTCCTCCCCTGGAACATCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLRLPSSSFRSGST*QSEQLHSSPGTSCR Trigger: CCTGCAGGATGTTCCAGGGGAGGAATGGAGTTGCTCACTCTGCCACGTGCTCCCTGACCTAAAGGAGGAAGATGGAAGCCTCAGCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAAGAGGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACAAGGCTTCAGCACTCTaGGTCCAGGCATTGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: CEEGLRGRWGQQEQESGHKASAL*VQALRS Trigger: GGATCTCAATGCCTGGACCAAGAGTGCTGAAGCCTT...GTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCCTCTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACTCTGTCTCTTCTTCCTaGACAATGGCCATGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTEGTMGPARTGVRPPKDSVSSS*TMAMPG Trigger: TCCTGGCATGGCCATTGTCAAGGAAGAAGAGACAGA...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS TCA 90 bp | CCTGTGGAGCGCACAGTGTGGTCCTTGGTGTATTTCACCCGCTGGTaGGCCTCCACACAGGTCTCACAAAGTGGTTCAGAGCACTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PVERTVWSLVYFTRW*ASTQVSQSGSEHST Trigger: TGTGGAGTGCTCTGAACCACTTTGTGAGACCTGTGTGGAGGCTCACCAGCGGGTGAAATACACCAAGGACCACACTGTGCGCTCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | TGCAGGGCAGGGAGGTGGCAATCCAGGTGGAAGCAAAATTCGCACTaGTTACACATGACCAGGTCACCTGGTTTCTGGCAGACACGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRAGRWQSRWKQNSH*LHMTRSPGFWQTRQ Trigger: CTGCCGTGTCTGCCAGAAACCAGGTGACCTGGTCATGTGTAACCAGTGCGAATTTTGCTTCCACCTGGATTGCCACCTCCCTGCCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGCCAAGAGTTTACGTaGGTTCCTCACTGCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTEGTMGPARTGVRPPKDSQEFT*VPHCIF Trigger: GAAGATGCAGTGAGGAACCAACGTAAACTCTTGGCT...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | GGGACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACTCCTCAGTCAGCTTGTaGAACTGTTTGAACATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GTEGTMGPARTGVRPPKDSSVSL*NCLNMR Trigger: CCGCATGTTCAAACAGTTCAACAAGCTGACTGAGGA...GTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | CATGGAGAATGTAGAGTCGGTAGCCAGCTGATGCAAGGGACGGCATaGTTCATGGCAGAACAGGGCCAGGAGAACACGCTCACATTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HGECRVGSQLMQGTA*FMAEQGQENTLTFP Trigger: CGGAAATGTGAGCGTGTTCTCCTGGCCCTGTTCTGCCATGAACCATGCCGTCCCTTGCATCAGCTGGCTACCGACTCTACATTCTCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACGGATCCACAATCATTTaGAGGGCCCGATGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RTGYGVKIQRPELDWADHGSTII*RARCSW Trigger: CCAGCTGCATCGGGCCCTCAAAATGATTGTGGATCC...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | CCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCCGCTCAGCCACAATCTaGCCAAAGGCTTCAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PPKDRVWGENTETRAGLGRSATI*PKASAL Trigger: GAGTGCTGAAGCCTTTGGCAAGATTGTGGCTGAGCG...GCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGGGACGATGGGGCCAGCAAGAACAGGAGTCAGGCCACCAAAGGACAGGAGCACAGCAGAAAACTaGGTGTCACCAAAGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TEGTMGPARTGVRPPKDRSTAEN*VSPKAS Trigger: TGATGCCTTTGGTGACACCAAGTTTTCTGCTGTGCT...CCTGTCCTTTGGTGGCCTGACTCCTGTTCTTGCTGGCCCCATCGTCCCCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS GCA 90 bp | TTAAGAGGCCACTTACCTCTCCCTCACCAGAGCGGGACCGCTTCATaGCTGATACATGCGGCTCTGCACTTGAATAGGGATCATCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LRGHLPLPHQSGTAS*LIHAALHLNRDHLT Trigger: GGTCAGATGATCCCTATTCAAGTGCAGAGCCGCATGTATCAGGCATGAAGCGGTCCCGCTCTGGTGAGGGAGAGGTAAGTGGCCTCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | CCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGCAGAATGGCCATCTaGACATCAACCTGCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPKDRVWGENTETRAGLGCRMAI*TSTCTR Trigger: GCGAGTGCAGGTTGATGTCAAGATGGCCATTCTGCA...GCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS GCA 90 bp | ATGATCTGCAGAATGGCCATCTTGACATCAACCTGCACTCGCTTCTaGACATCAGACACCTGGCGGATCGAGCTTCGAACCTCCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MICRMAILTSTCTRF*TSDTWRIELRTSLV Trigger: CACCAAGGAGGTTCGAAGCTCGATCCGCCAGGTGTCTGATGTGCAGAAGCGAGTGCAGGTTGATGTCAAGATGGCCATTCTGCAGATCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | GGTGTATTTCACCCGCTGGTGAGCCTCCACACAGGTCTCACAAAGTaGTTCAGAGCACTCCACACAATAGCTAGTGGCTGGGGCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: GVFHPLVSLHTGLTK*FRALHTIASGWGII Trigger: GATAATGCCCCAGCCACTAGCTATTGTGTGGAGTGCTCTGAACCACTTTGTGAGACCTGTGTGGAGGCTCACCAGCGGGTGAAATACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | AATAGGGATCATCTGACCCAAAGCCATATCCCTCTTGTACTTCCATaGGCTGGCTACTGCCAGAACCTTGCTTGCTTAGAGGGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NRDHLTQSHIPLVLP*AGYCQNLACLEGLG Trigger: CCCCAGGCCCTCTAAGCAAGCAAGGTTCTGGCAGTAGCCAGCCCATGGAAGTACAAGAGGGATATGGCTTTGGGTCAGATGATCCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | ATTGTAGTCCTCAGTAGTGCTTCCAGGAAAGACCTTGAAGACTGGTaGCTGGCTGTCAGAGGTGAGGTCCAGATCCAGGCGTTCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IVVLSSASRKDLEDW*LAVRGEVQIQAFKA Trigger: AGCCTTGAACGCCTGGATCTGGACCTCACCTCTGACAGCCAGCCACCAGTCTTCAAGGTCTTTCCTGGAAGCACTACTGAGGACTACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS CCA 90 bp | CAGATTGTAGTCCTCAGTAGTGCTTCCAGGAAAGACCTTGAAGACTaGTGGCTGGCTGTCAGAGGTGAGGTCCAGATCCAGGCGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QIVVLSSASRKDLED*WLAVRGEVQIQAFK Trigger: CTTGAACGCCTGGATCTGGACCTCACCTCTGACAGCCAGCCACCAGTCTTCAAGGTCTTTCCTGGAAGCACTACTGAGGACTACAATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGCATGCGGCTCTGCACTaGAATAGGGATCATCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RPPKDRVWGENTETRAGLHAALH*NRDHLT Trigger: GGTCAGATGATCCCTATTCAAGTGCAGAGCCGCATG...CAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CAA 90 bp | CCACCAAAGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTCACATTTCCGCTGGTaGGCTGGTGAGAGTTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: PPKDRVWGENTETRAGLGSHFRW*AGESLA Trigger: AGCTAAACTCTCACCAGCCAACCAGCGGAAATGTGA...GCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCTTTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 90 bp | TCAGACACCTGGCGGATCGAGCTTCGAACCTCCTTGGTGTTTTTCTaGAGTGTGGCATGTTTGTCCCCAAGACGTTTCACCAGTGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: SDTWRIELRTSLVFF*SVACLSPRRFTSEA Trigger: GGCTTCACTGGTGAAACGTCTTGGGGACAAACATGCCACACTTCAGAAAAACACCAAGGAGGTTCGAAGCTCGATCCGCCAGGTGTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS GCA 90 bp | TTCAGCTCCTTCATGATCTGCAGAATGGCCATCTTGACATCAACCTaGACTCGCTTCTGCACATCAGACACCTGGCGGATCGAGCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: FSSFMICRMAILTST*TRFCTSDTWRIELR Trigger: TCGAAGCTCGATCCGCCAGGTGTCTGATGTGCAGAAGCGAGTGCAGGTTGATGTCAAGATGGCCATTCTGCAGATCATGAAGGAGCTGAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 90 bp | AAGCAAAATTCGCACTGGTTACACATGACCAGGTCACCTGGTTTCTaGCAGACACGGCAGATAGTGGCACTGTCATCCAGGATACCTGGC | + |
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Preference number: 5 (lower is better) Translates to: KQNSHWLHMTRSPGF*QTRQIVALSSRIPG Trigger: GCCAGGTATCCTGGATGACAGTGCCACTATCTGCCGTGTCTGCCAGAAACCAGGTGACCTGGTCATGTGTAACCAGTGCGAATTTTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 90 bp | CAGGTGGAAGCAAAATTCGCACTGGTTACACATGACCAGGTCACCTaGTTTCTGGCAGACACGGCAGATAGTGGCACTGTCATCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: QVEAKFALVTHDQVT*FLADTADSGTVIQD Trigger: ATCCTGGATGACAGTGCCACTATCTGCCGTGTCTGCCAGAAACCAGGTGACCTGGTCATGTGTAACCAGTGCGAATTTTGCTTCCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CAA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACAGCAAGAGAGCTGTATaGTTATCACTCTCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: RTGYGVKIQRPELDWADHSKRAV*LSLSRA Trigger: GGCTCTGGAGAGTGATAACAATACAGCTCTCTTGCT...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS-3UTR CAA 90 bp | AGGACAGGGTATGGGGTGAAAATACAGAGACCAGAGCTGGACTGGGCTGACCACAGCTTGTTGAACTGTTaGAACATGCGGCCCACATCT | + |
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Preference number: 5 (lower is better) Translates to: RTGYGVKIQRPELDWADHSLLNC*NMRPTS Trigger: AGATGTGGGCCGCATGTTCAAACAGTTCAACAAGCT...GTGGTCAGCCCAGTCCAGCTCTGGTCTCTGTATTTTCACCCCATACCCTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 90 bp | CAGCCACAATCTTGCCAAAGGCTTCAGCACTCTTGGTCCAGGCATTaGGATCCCACTGAAACTTCATCTCACCATGAGGCTCCACAGGAT | + |
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Preference number: 5 (lower is better) Translates to: QPQSCQRLQHSWSRH*DPTETSSHHEAPQD Trigger: ATCCTGTGGAGCCTCATGGTGAGATGAAGTTTCAGTGGGATCTCAATGCCTGGACCAAGAGTGCTGAAGCCTTTGGCAAGATTGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 90 bp | GGTCTCACAAAGTGGTTCAGAGCACTCCACACAATAGCTAGTGGCTaGGGCATTATCTTCACAGCTAGTGCAGCACTGGTTAGCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: GLTKWFRALHTIASG*GIIFTASAALVSIL Trigger: CAGGATGCTAACCAGTGCTGCACTAGCTGTGAAGATAATGCCCCAGCCACTAGCTATTGTGTGGAGTGCTCTGAACCACTTTGTGAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 90 bp | TCATTCATGCGTGTCTCAAAGAAGCGCTGCAAGCCGATGATGGACTaGACATCTGCCTTGTCCTCAGTCAGCTTGTTGAACTGTTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: SFMRVSKKRCKPMMD*TSALSSVSLLNCLN Trigger: GTTCAAACAGTTCAACAAGCTGACTGAGGACAAGGCAGATGTTCAGTCCATCATCGGCTTGCAGCGCTTCTTTGAGACACGCATGAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 90 bp | GTTTTTCTGAAGTGTGGCATGTTTGTCCCCAAGACGTTTCACCAGTaGAGCCAAGAGTTTACGTTGGTTCCTCACTGCATCTTCCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: VFLKCGMFVPKTFHQ*SQEFTLVPHCIFQK Trigger: TTTTTGGAAGATGCAGTGAGGAACCAACGTAAACTCTTGGCTTCACTGGTGAAACGTCTTGGGGACAAACATGCCACACTTCAGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | ACGCTTCTCACCGCCCGCCGAGCCCTCGCCCGACCCTaGGCTACCAGAGGCCGCCGAGGCGGCCGTCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: TLLTARRALARP*ATRGRRGGRRG Trigger: GCCGCGACGGCCGCCTCGGCGGCCTCTGGTAGCCCAGGGTCGGGCGAGGGCTCGGCGGGCGGTGAGAAGCGT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS GCA 72 bp | GTCGCCCGCCGAGCCGCCATCCCCCGAATTATTCGCTaGGGCGGGTGTAGCGGGGCCCAGGCAGGCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: VARRAAIPRIIR*GGCSGAQAGTA Trigger: TGCAGTGCCTGCCTGGGCCCCGCTACACCCGCCGCAGCGAATAATTCGGGGGATGGCGGCTCGGCGGGCGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | CACCAGGACCTTCAGTCAGAGGCATCAACACAGGCTTaGTTTCAGGACCCTCGGGGGCAGCCGGGGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HQDLQSEASTQA*FQDPRGQPGEL Trigger: GAGCTCCCCCGGCTGCCCCCGAGGGTCCTGAAACCAAGCCTGTGTTGATGCCTCTGACTGAAGGTCCTGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CAA 90 bp | GGTCCCTCGGCACCAGGACCTTCAGTCAGAGGCATCAACACAGGCTaGGTTTCAGGACCCTCGGGGGCAGCCGGGGGAGCTCCAATAGCA | + |
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Preference number: 6 (lower is better) Translates to: GPSAPGPSVRGINTG*VSGPSGAAGGAPIA Trigger: TGCTATTGGAGCTCCCCCGGCTGCCCCCGAGGGTCCTGAAACCAAGCCTGTGTTGATGCCTCTGACTGAAGGTCCTGGTGCCGAGGGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 72 bp | GTCATGGTCCAGTGCTGGCGCTCCAGACGTTCCTGCTaGCCCTCGGTCACCTTCTGGGCATCATTGACCAGA | + |
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Preference number: 6 (lower is better) Translates to: VMVQCWRSRRSC*PSVTFWASLTR Trigger: TCTGGTCAATGATGCCCAGAAGGTGACCGAGGGTCAGCAGGAACGTCTGGAGCGCCAGCACTGGACCATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | CACGATGTCTTTGGAGTAGCACTGCTGTTTGCACACTaGACAATCCACCATAGCGCCGTCGCCCGCCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: HDVFGVALLFAH*TIHHSAVARRA Trigger: GGCTCGGCGGGCGACGGCGCTATGGTGGATTGTCCAGTGTGCAAACAGCAGTGCTACTCCAAAGACATCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS GCA 72 bp | GGCTCCTGGTGGCACAGTCCCAGCCTGACCAGCAGCTaGTGCAGCAGCACCACGCTCAATAACAATCAGATT | + |
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Preference number: 6 (lower is better) Translates to: GSWWHSPSLTSS*CSSTTLNNNQI Trigger: AATCTGATTGTTATTGAGCGTGGTGCTGCTGCAGCAGCTGCTGGTCAGGCTGGGACTGTGCCACCAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 72 bp | GGCTGCTCCATGGAGAATGTAGAGTCGGTAGCCAGCTaGTGCAAGGGACGGCATGGTTCATGGCAGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: GCSMENVESVAS*CKGRHGSWQNR Trigger: CCTGTTCTGCCATGAACCATGCCGTCCCTTGCATCAGCTGGCTACCGACTCTACATTCTCCATGGAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS GCA 72 bp | AGCCATATCCCTCTTGTACTTCCATGGGCTGGCTACTaGCAGAACCTTGCTTGCTTAGAGGGCCTGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SHIPLVLPWAGY*QNLACLEGLGL Trigger: GAGCCCCAGGCCCTCTAAGCAAGCAAGGTTCTGGCAGTAGCCAGCCCATGGAAGTACAAGAGGGATATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | CACCCGCTGGTGAGCCTCCACACAGGTCTCACAAAGTaGTTCAGAGCACTCCACACAATAGCTAGTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: HPLVSLHTGLTK*FRALHTIASGW Trigger: CCAGCCACTAGCTATTGTGTGGAGTGCTCTGAACCACTTTGTGAGACCTGTGTGGAGGCTCACCAGCGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | CAGGGCCAGAGAGCTCCTGAGAACTTAGGCCAGCACTaGGAAGGTTCAATGGTGGTGGTTCTACCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: QGQRAPENLGQH*EGSMVVVLPAQ Trigger: CTGTGCTGGTAGAACCACCACCATTGAACCTTCCCAGTGCTGGCCTAAGTTCTCAGGAGCTCTCTGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 72 bp | CGCACAGTGTGGTCCTTGGTGTATTTCACCCGCTGGTaGGCCTCCACACAGGTCTCACAAAGTGGTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RTVWSLVYFTRW*ASTQVSQSGSE Trigger: CTCTGAACCACTTTGTGAGACCTGTGTGGAGGCTCACCAGCGGGTGAAATACACCAAGGACCACACTGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 72 bp | GTTCCTGCTGACCCTCGGTCACCTTCTGGGCATCATTaGCCAGAACTCGACCCCGCTTATTCAGCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VPADPRSPSGHH*PELDPAYSAPS Trigger: TGAAGGAGCTGAATAAGCGGGGTCGAGTTCTGGTCAATGATGCCCAGAAGGTGACCGAGGGTCAGCAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS GCA 72 bp | CACTTACCTCTCCCTCACCAGAGCGGGACCGCTTCATaGCTGATACATGCGGCTCTGCACTTGAATAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HLPLPHQSGTAS*LIHAALHLNRD Trigger: ATCCCTATTCAAGTGCAGAGCCGCATGTATCAGGCATGAAGCGGTCCCGCTCTGGTGAGGGAGAGGTAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS GCA 72 bp | TCCTGGTGGCACAGTCCCAGCCTGACCAGCAGCTGCTaGAGCAGCACCACGCTCAATAACAATCAGATTGTA | + |
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Preference number: 6 (lower is better) Translates to: SWWHSPSLTSSC*SSTTLNNNQIV Trigger: TACAATCTGATTGTTATTGAGCGTGGTGCTGCTGCAGCAGCTGCTGGTCAGGCTGGGACTGTGCCACCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | TCGCACTGGTTACACATGACCAGGTCACCTGGTTTCTaGCAGACACGGCAGATAGTGGCACTGTCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SHWLHMTRSPGF*QTRQIVALSSR Trigger: CCTGGATGACAGTGCCACTATCTGCCGTGTCTGCCAGAAACCAGGTGACCTGGTCATGTGTAACCAGTGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | AGGCTTCCATCTTCCTCCTTTAGGTCAGGGAGCACGTaGCAGAGTGAGCAACTCCATTCCTCCCCTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: RLPSSSFRSGST*QSEQLHSSPGT Trigger: TGTTCCAGGGGAGGAATGGAGTTGCTCACTCTGCCACGTGCTCCCTGACCTAAAGGAGGAAGATGGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CAA 90 bp | CGACCCCGCTTATTCAGCTCCTTCATGATCTGCAGAATGGCCATCTaGACATCAACCTGCACTCGCTTCTGCACATCAGACACCTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RPRLFSSFMICRMAI*TSTCTRFCTSDTWR Trigger: CCGCCAGGTGTCTGATGTGCAGAAGCGAGTGCAGGTTGATGTCAAGATGGCCATTCTGCAGATCATGAAGGAGCTGAATAAGCGGGGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 72 bp | CAGGAGAACACGCTCACATTTCCGCTGGTTGGCTGGTaGGAGTTTAGCTACCACACCAGTGCTATCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QENTLTFPLVGW*EFSYHTSAICS Trigger: GGAGCAGATAGCACTGGTGTGGTAGCTAAACTCTCACCAGCCAACCAGCGGAAATGTGAGCGTGTTCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS GCA 72 bp | AGAATGGCCATCTTGACATCAACCTGCACTCGCTTCTaGACATCAGACACCTGGCGGATCGAGCTTCGAACC | + |
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Preference number: 6 (lower is better) Translates to: RMAILTSTCTRF*TSDTWRIELRT Trigger: GGTTCGAAGCTCGATCCGCCAGGTGTCTGATGTGCAGAAGCGAGTGCAGGTTGATGTCAAGATGGCCATTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | GACCCAAAGCCATATCCCTCTTGTACTTCCATGGGCTaGCTACTGCCAGAACCTTGCTTGCTTAGAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: DPKPYPSCTSMG*LLPEPCLLRGP Trigger: AGGCCCTCTAAGCAAGCAAGGTTCTGGCAGTAGCCAGCCCATGGAAGTACAAGAGGGATATGGCTTTGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | GTGGCTGGGGCATTATCTTCACAGCTAGTGCAGCACTaGTTAGCATCCTGGGAATCAGAAGAGGCCTTACTG | + |
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Preference number: 6 (lower is better) Translates to: VAGALSSQLVQH*LASWESEEALL Trigger: CAGTAAGGCCTCTTCTGATTCCCAGGATGCTAACCAGTGCTGCACTAGCTGTGAAGATAATGCCCCAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | ACATCAACCTGCACTCGCTTCTGCACATCAGACACCTaGCGGATCGAGCTTCGAACCTCCTTGGTGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TSTCTRFCTSDT*RIELRTSLVFF Trigger: GAAAAACACCAAGGAGGTTCGAAGCTCGATCCGCCAGGTGTCTGATGTGCAGAAGCGAGTGCAGGTTGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | GCAAAATGTGTTCCTGGTGCTTCTGAATTTTGGTCATaGTCCAGTGCTGGCGCTCCAGACGTTCCTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: AKCVPGASEFWS*SSAGAPDVPAD Trigger: GTCAGCAGGAACGTCTGGAGCGCCAGCACTGGACCATGACCAAAATTCAGAAGCACCAGGAACACATTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | GCAAAATTCGCACTGGTTACACATGACCAGGTCACCTaGTTTCTGGCAGACACGGCAGATAGTGGCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: AKFALVTHDQVT*FLADTADSGTV Trigger: GACAGTGCCACTATCTGCCGTGTCTGCCAGAAACCAGGTGACCTGGTCATGTGTAACCAGTGCGAATTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CAA 72 bp | GGGACCGCTTCATGCCTGATACATGCGGCTCTGCACTaGAATAGGGATCATCTGACCCAAAGCCATATCCCT | + |
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Preference number: 6 (lower is better) Translates to: GTASCLIHAALH*NRDHLTQSHIP Trigger: AGGGATATGGCTTTGGGTCAGATGATCCCTATTCAAGTGCAGAGCCGCATGTATCAGGCATGAAGCGGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CAA 90 bp | CACCAGAGCGGGACCGCTTCATGCCTGATACATGCGGCTCTGCACTaGAATAGGGATCATCTGACCCAAAGCCATATCCCTCTTGTACTT | + |
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Preference number: 6 (lower is better) Translates to: HQSGTASCLIHAALH*NRDHLTQSHIPLVL Trigger: AAGTACAAGAGGGATATGGCTTTGGGTCAGATGATCCCTATTCAAGTGCAGAGCCGCATGTATCAGGCATGAAGCGGTCCCGCTCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 72 bp | CGTGTCTCAAAGAAGCGCTGCAAGCCGATGATGGACTaGACATCTGCCTTGTCCTCAGTCAGCTTGTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: RVSKKRCKPMMD*TSALSSVSLLN Trigger: GTTCAACAAGCTGACTGAGGACAAGGCAGATGTTCAGTCCATCATCGGCTTGCAGCGCTTCTTTGAGACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 72 bp | CATTCATGCGTGTCTCAAAGAAGCGCTGCAAGCCGATaGTGGACTGAACATCTGCCTTGTCCTCAGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HSCVSQRSAASR*WTEHLPCPQSA Trigger: AGCTGACTGAGGACAAGGCAGATGTTCAGTCCATCATCGGCTTGCAGCGCTTCTTTGAGACACGCATGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS GCA 72 bp | TTCATGATCTGCAGAATGGCCATCTTGACATCAACCTaGACTCGCTTCTGCACATCAGACACCTGGCGGATC | + |
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Preference number: 6 (lower is better) Translates to: FMICRMAILTST*TRFCTSDTWRI Trigger: GATCCGCCAGGTGTCTGATGTGCAGAAGCGAGTGCAGGTTGATGTCAAGATGGCCATTCTGCAGATCATGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | CATCTGACCCAAAGCCATATCCCTCTTGTACTTCCATaGGCTGGCTACTGCCAGAACCTTGCTTGCTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: HLTQSHIPLVLP*AGYCQNLACLE Trigger: CTCTAAGCAAGCAAGGTTCTGGCAGTAGCCAGCCCATGGAAGTACAAGAGGGATATGGCTTTGGGTCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CCA 72 bp | AAGTGGTTCAGAGCACTCCACACAATAGCTAGTGGCTaGGGCATTATCTTCACAGCTAGTGCAGCACTGGTT | + |
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Preference number: 6 (lower is better) Translates to: KWFRALHTIASG*GIIFTASAALV Trigger: AACCAGTGCTGCACTAGCTGTGAAGATAATGCCCCAGCCACTAGCTATTGTGTGGAGTGCTCTGAACCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS TCA 72 bp | AAGTGTGGCATGTTTGTCCCCAAGACGTTTCACCAGTaGAGCCAAGAGTTTACGTTGGTTCCTCACTGCATC | + |
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Preference number: 6 (lower is better) Translates to: KCGMFVPKTFHQ*SQEFTLVPHCI Trigger: GATGCAGTGAGGAACCAACGTAAACTCTTGGCTTCACTGGTGAAACGTCTTGGGGACAAACATGCCACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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| CDS CAA 72 bp | TTATTCAGCTCCTTCATGATCTGCAGAATGGCCATCTaGACATCAACCTGCACTCGCTTCTGCACATCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LFSSFMICRMAI*TSTCTRFCTSD Trigger: GTCTGATGTGCAGAAGCGAGTGCAGGTTGATGTCAAGATGGCCATTCTGCAGATCATGAAGGAGCTGAATAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005705.8 |
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