Pregenerated sensors for TRIM23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021712Ensembl transcript IDs: ENSMUST00000022225.12, ENSMUST00000069174.6, ENSMUST00000069187.12
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGACAGGTTTTTCATGTGACTTACGACACTTTACCAACAAAGGATaGACATTACTTAGCCTAAGAAAATGTGTTGAACAAATAAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: VTGFSCDLRHFTNKG*TLLSLRKCVEQIKE Trigger: CTCCTTTATTTGTTCAACACATTTTCTTAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAAACCTGTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGTTCTTCCTTTTAACTaGGACCTTGTCCTAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: YILPIIFDGLFIVLAPKFVLPFN*DLVLKS Trigger: GCTCTTTAGGACAAGGTCTCAGTTAAAAGGAAGAAC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATCTACTCATTGTCTGTaGCCACTTCTCTCTCAATAT | + |
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Preference number: 2 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLSTHCL*PLLSQY Trigger: ATATTGAGAGAGAAGTGGTCACAGACAATGAGTAGA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTTCTACTCATTGTCTGTaGCCACTTCTCTCTCAATAT | + |
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Preference number: 2 (lower is better) Translates to: YILPIIFDGLFIVLAPKFSTHCL*PLLSQY Trigger: ATATTGAGAGAGAAGTGGTCACAGACAATGAGTAGA...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGACAGGTTTTTCATGTaGCTTACGACACTTTACCAA | + |
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Preference number: 2 (lower is better) Translates to: YILPIIFDGLFIVLAPKFDRFFM*LTTLYQ Trigger: TTGGTAAAGTGTCGTAAGTCACATGAAAAACCTGTC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAGCATTCCCACTGTTTaGAAAACCTTTCCTAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: YILPIIFDGLFIVLAPKFSIPTV*KTFPKV Trigger: TACCTTAGGAAAGGTTTTTCAAACAGTGGGAATGCT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTTTTACCAACAAAGGATaGACATTACTTAGCCTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: YILPIIFDGLFIVLAPKFFTNKG*TLLSLR Trigger: TCTTAGGCTAAGTAATGTGCATCCTTTGTTGGTAAA...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAAAACAATAAAAAGGTaGGGTAAAGCCATACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: YILPIIFDGLFIVLAPKFKTIKR*GKAILP Trigger: AGGAAGTATGGCTTTACCCCACCTTTTTATTGTTTT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR CAA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAGGACCTTCTACTCATaGTCTGTGACCACTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: YILPIIFDGLFIVLAPKFRTFYS*SVTTSL Trigger: GAGAGAAGTGGTCACAGACAATGAGTAGAAGGTCCT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR-3UTR CAA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAAGGACCTTCTACTCATaGTCTGTGACCACTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLRTFYS*SVTTSL Trigger: GAGAGAAGTGGTCACAGACAATGAGTAGAAGGTCCT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR TCA 72 bp | TCAATGTGTTTATGTAAAGGTGACAGGTTTTTCATGTaGCTTACGACACTTTACCAACAAAGGATGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: SMCLCKGDRFFM*LTTLYQQRMHI Trigger: AATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAAACCTGTCACCTTTACATAAACACATTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| 3UTR GCA 72 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATaGACATTACTTAGCCTAAGAAAATGTGTTGAACAA | + |
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Preference number: 3 (lower is better) Translates to: FSCDLRHFTNKG*TLLSLRKCVEQ Trigger: TTGTTCAACACATTTTCTTAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAGTCCCCCGGCTGCCCTaGCGCCCACTGTCTACTCCG | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLVPRLP*RPLSTP Trigger: CGGAGTAGACAGTGGGCGGCAGGGCAGCCGGGGGAC...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGTCCCCCGGCTGCCCTaGCGCCCACTGTCTACTCCG | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFVPRLP*RPLSTP Trigger: CGGAGTAGACAGTGGGCGGCAGGGCAGCCGGGGGAC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCAGCCGTCCCCCGGCTaGCCTGCCGCCCACTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFQPSPG*PAAHCL Trigger: TAGACAGTGGGCGGCAGGGCAGCCGGGGGACGGCTG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACAGCCGTCCCCCGGCTaGCCTGCCGCCCACTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLQPSPG*PAAHCL Trigger: TAGACAGTGGGCGGCAGGGCAGCCGGGGGACGGCTG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGCATGCACCTGGTGCTaGCAGCACATGGTTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFACTWC*QHMVFS Trigger: TGAGAAAACCATGTGCTGTCAGCACCAGGTGCATGC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAGCATGCACCTGGTGCTaGCAGCACATGGTTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLACTWC*QHMVFS Trigger: TGAGAAAACCATGTGCTGTCAGCACCAGGTGCATGC...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCTCCAGATGTCCCAATaGCCTCTTCTGCAGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFLQMSQ*PLLQLH Trigger: ATGGAGCTGCAGAAGAGGCCATTGGGACATCTGGAG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATCTGCAGCTCCATACTaGCCAATGTGCCCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLSAAPY*PMCPFC Trigger: GCAAAATGGGCACATTGGTCAGTATGGAGCTGCAGA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCTGAGATTTCCTCAGTaGAGGTCCGTATGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFLRFPQ*RSVCSE Trigger: CTCACTGCATACGGACCTTCACTGAGGAAATCTCAG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022225.12 |
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| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCGAGCATCACAGCCCTaGATATACCAACTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFRASQP*IYQLLP Trigger: TGGAAGGAGTTGGTATATTCAGGGCTGTGATGCTCG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACCCAATGGCCTCTTCTaGAGCTCCATACTGACCAAT | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLPNGLF*SSILTN Trigger: ATTGGTCAGTATGGAGCTGCAGAAGAGGCCATTGGG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCCCAATGGCCTCTTCTaGAGCTCCATACTGACCAAT | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFPNGLF*SSILTN Trigger: ATTGGTCAGTATGGAGCTGCAGAAGAGGCCATTGGG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATTCTGGTTCCAGTACTaGATGCTTGTGACCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLFWFQY*MLVTLV Trigger: CACCAAGGTCACAAGCATTCAGTACTGGAACCAGAA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022225.12 |
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| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGGGACATGTTCTGTGTaGGCCATTCCAATTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFGTCSV*AIPIPS Trigger: AGATGGAATTGGAATGGCTCACACAGAACATGTCCC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022225.12 |
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| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAATAAGCTCTGACACATaGTCGGGCATTCTCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLISSDT*SGILCS Trigger: ACTGCAGAGAATGCCCGATCATGTGTCAGAGCTTAT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTATAAGCTCTGACACATaGTCGGGCATTCTCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFISSDT*SGILCS Trigger: ACTGCAGAGAATGCCCGATCATGTGTCAGAGCTTAT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACGTATTGCTCTTCCATaGAGAGGCAAGCGAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLRIALP*RGKRVR Trigger: TCTTACTCGCTTGCCTCTGCATGGAAGAGCAATACG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATTGCCAAGACAACTCTaGAATCATCCTGCTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLLPRQL*NHPAAE Trigger: CTCTGCAGCAGGATGATTGCAGAGTTGTCTTGGCAA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGCAACCTCTGTAAACTaGTGCTGCTGTTTCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFATSVN*CCCFCS Trigger: ACTGCAGAAACAGCAGCAGCAGTTTACAGAGGTTGC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAGCAACCTCTGTAAACTaGTGCTGCTGTTTCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLATSVN*CCCFCS Trigger: ACTGCAGAAACAGCAGCAGCAGTTTACAGAGGTTGC...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAGCAAACAAACTCAATaGCATGCACCTGGTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFSKQTQ*HAPGAD Trigger: GTCAGCACCAGGTGCATGCCATTGAGTTTGTTTGCT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAAGCAAACAAACTCAATaGCATGCACCTGGTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLSKQTQ*HAPGAD Trigger: GTCAGCACCAGGTGCATGCCATTGAGTTTGTTTGCT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAAACTTGAGAACAGTCTaGGCACAAGTGAGTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLNLRTV*AQVSCT Trigger: TGTGCAACTCACTTGTGCTCAGACTGTTCTCAAGTT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCACATGGTTTTCTCATaGGGTTTATCAGCTAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFHMVFS*GLSARG Trigger: GCCTCTAGCTGATAAACCTCATGAGAAAACCATGTG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACACATGGTTTTCTCATaGGGTTTATCAGCTAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLHMVFS*GLSARG Trigger: GCCTCTAGCTGATAAACCTCATGAGAAAACCATGTG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAATTGATGCTCGGATCTaGTTAGCTTCTGGTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLIDARI*LASGSS Trigger: ACTGGAACCAGAAGCTAATCAGATCCGAGCATCAAT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022225.12 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAAAATGGGCAACGTATTaGTCTTCCATGCAGAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLKWATY*SSMQRQ Trigger: TTGCCTCTGCATGGAAGAGCAATACGTTGCCCATTT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAACCTCTGTAAACTGCTaGTGCTGTTTCTGCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLTSVNC*CCFCSV Trigger: AACACTGCAGAAACAGCAGCAGCAGTTTACAGAGGT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTACCTCTGTAAACTGCTaGTGCTGTTTCTGCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFTSVNC*CCFCSV Trigger: AACACTGCAGAAACAGCAGCAGCAGTTTACAGAGGT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAGACACAGCACATGAGTaGACTAGTTTGACAACCTTC | + |
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Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLDTAHE*TSLTTF Trigger: GAAGGTTGTCAAACTAGTCCACTCATGTGCTGTGTC...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGACACAGCACATGAGTaGACTAGTTTGACAACCTTC | + |
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Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFDTAHE*TSLTTF Trigger: GAAGGTTGTCAAACTAGTCCACTCATGTGCTGTGTC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATATACAGATGCAACGTaGGCTTCATCTTCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLYTDAT*ASSSSQ Trigger: CTGTGATGAAGATGAAGCTCACGTTGCATCTGTATA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTATGAGTGGACTAGTTTaGCAACCTTCTTCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFMSGLV*QPSSKQ Trigger: TTGCTTGGAAGAAGGTTGTCAAACTAGTCCACTCAT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAAGGTCCGTATGCAGTaGGCCATGTCTAAAATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFKVRMQ*AMSKID Trigger: ATCAATTTTAGACATGGCTCACTGCATACGGACCTT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022225.12 |
||
| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCAGAAAAATAAGCTCTaGCACATGATCGGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFQKNKL*HMIGHS Trigger: AGAATGCCCGATCATGTGTCAGAGCTTATTTTTCTG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACAGAAAAATAAGCTCTaGCACATGATCGGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLQKNKL*HMIGHS Trigger: AGAATGCCCGATCATGTGTCAGAGCTTATTTTTCTG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAGTGATTTCTTCTACTaGAAGTGCTCCAGCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFSDFFY*KCSSYI Trigger: GATGTAGCTGGAGCACTTTCAGTAGAAGAAATCACT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAAGTGATTTCTTCTACTaGAAGTGCTCCAGCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLSDFFY*KCSSYI Trigger: GATGTAGCTGGAGCACTTTCAGTAGAAGAAATCACT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACCAATGTGCCCATTTTaGAAACGTTCTAAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLPMCPF*KRSKSS Trigger: GGAGCTTTTAGAACGTTTGCAAAATGGGCACATTGG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGAGTTGCACACACAGTaGAATATACAGATGCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFELHTQ*NIQMQR Trigger: ACGTTGCATCTGTATATTGCACTGTGTGTGCAACTC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAGAGGCACACGCCTATaGTTTGCTAATGTCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFRGTRL*FANVFV Trigger: TACAAAGACATTAGCAAAGCATAGGCGTGTGCCTCT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAAGAGGCACACGCCTATaGTTTGCTAATGTCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLRGTRL*FANVFV Trigger: TACAAAGACATTAGCAAAGCATAGGCGTGTGCCTCT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGTCATATCCTCTTGTTaGTGCCTAAGCCAAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFVISSC*CLSQIS Trigger: ACTGATTTGGCTTAGGCAGCAACAAGAGGATATGAC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAGTCATATCCTCTTGTTaGTGCCTAAGCCAAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLVISSC*CLSQIS Trigger: ACTGATTTGGCTTAGGCAGCAACAAGAGGATATGAC...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTTACTTGTCGATCAAATaGGCAACGTATTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFYLSIK*ATYCSS Trigger: GGAAGAGCAATACGTTGCCCATTTGATCGACAAGTA...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATACTTGTCGATCAAATaGGCAACGTATTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLYLSIK*ATYCSS Trigger: GGAAGAGCAATACGTTGCCCATTTGATCGACAAGTA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTGGTGCTGACAGCACATaGTTTTCTCATGAGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFGADST*FSHEVY Trigger: ATAAACCTCATGAGAAAACCATGTGCTGTCAGCACC...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAGGTGCTGACAGCACATaGTTTTCTCATGAGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLGADST*FSHEVY Trigger: ATAAACCTCATGAGAAAACCATGTGCTGTCAGCACC...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCCACAGCATAGTTTATaGAGACTGAGAAGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFPQHSL*RLRSSV Trigger: CACTGAACTTCTCAGTCTCCATAAACTATGCTGTGG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCCTCCTTCAATGTGCTaGACAATCCCAACTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFPPSMC*TIPTNF Trigger: AAAATTAGTTGGGATTGTTCAGCACATTGAAGGAGG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022225.12 |
||
| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAGAGCCATTTCTTCTTaGCGACAAAGAGTTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFRAISS*RQRVSC Trigger: ACATGAAACTCTTTGTCGTCAAGAAGAAATGGCTCT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAAGTGCAATATACAGATaGAACGTGAGCTTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLSAIYR*NVSFIF Trigger: GAAGATGAAGCTCACGTTGCATCTGTATATTGCACT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCAACTGAATATGATCTaGAACCTCTGTAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFQLNMI*NLCKLL Trigger: CAGCAGTTTACAGAGGTTGCAGATCATATTCAGTTG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATGCAAGTTCACTGTGTaGTTCACTAATTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLCKFTV*FTNSVS Trigger: AGAGACAGAATTAGTGAAGCACACAGTGAACTTGCA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTTGCAAGTTCACTGTGTaGTTCACTAATTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFCKFTV*FTNSVS Trigger: AGAGACAGAATTAGTGAAGCACACAGTGAACTTGCA...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCTTTGTAAAAGTGACTaGAATACTGGCATCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFLCKSD*NTGIQL Trigger: CAGTTGGATGCCAGTATTCCAGTCACTTTTACAAAG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACTTTGTAAAAGTGACTaGAATACTGGCATCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLLCKSD*NTGIQL Trigger: CAGTTGGATGCCAGTATTCCAGTCACTTTTACAAAG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATTTTCTGGAATAATCTaGGATTTCCTCAGTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLFSGII*DFLSEG Trigger: ACCTTCACTGAGGAAATCTCAGATTATTCCAGAAAA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022225.12 |
||
| CDS-3UTR TCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCAACAGCTTGTGTATTaGGGTAATAATGTTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFQQLVY*GNNVST Trigger: TGTGGAAACATTATTACCTCAATACACAAGCTGTTG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTATATCCTCTTGTTGCTaGCTAAGCCAAATCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFISSCC*LSQISF Trigger: AAAACTGATTTGGCTTAGGCAGCAACAAGAGGATAT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTAATATCCTCTTGTTGCTaGCTAAGCCAAATCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLISSCC*LSQISF Trigger: AAAACTGATTTGGCTTAGGCAGCAACAAGAGGATAT...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATGTGATTTCTTGTTTTaGCAAGACAACTCTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLCDFLF*QDNSAI Trigger: GATTGCAGAGTTGTCTTGGCAAAACAAGAAATCACA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CCA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCTCGGATTTCCATTTTaGGTCCAATATGAACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YILPIIFDGLFIVLAPKFLGFPF*VQYELY Trigger: ATAGAGTTCATATTGGACCCAAAATGGAAATCCGAG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS GCA 90 bp | CACAAACCCCACACTCCAGAACCTTCACCACAGCCGTCCCCCGGCTaGCCTGCCGCCCACTGTCTACTCCGGCTCCGGGCTTGTTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: HKPHTPEPSPQPSPG*PAAHCLLRLRACLQ Trigger: CTGTAAACAAGCCCGGAGCCGGAGTAGACAGTGGGCGGCAGGGCAGCCGGGGGACGGCTGTGGTGAAGGTTCTGGAGTGTGGGGTTTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS CCA 90 bp | CCAAGCAAACAAACTCAATGGCATGCACCTGGTGCTGACAGCACATaGTTTTCTCATGAGGTTTATCAGCTAGAGGCACACGCCTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSKQTQWHAPGADST*FSHEVYQLEAHAYA Trigger: AGCATAGGCGTGTGCCTCTAGCTGATAAACCTCATGAGAAAACCATGTGCTGTCAGCACCAGGTGCATGCCATTGAGTTTGTTTGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
||
| CDS-3UTR CAA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTTCCAGCAGCCACAAGTaGCCGGGACAGCCAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YILPIIFDGLFIVLAPKFSSSHK*PGQPVQ Trigger: TTGGACTGGCTGTCCCGGCAACTTGTGGCTGCTGGA...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CAA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATCCAGCAGCCACAAGTaGCCGGGACAGCCAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLSSSHK*PGQPVQ Trigger: TTGGACTGGCTGTCCCGGCAACTTGTGGCTGCTGGA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS TCA 90 bp | TGCTTTCCATATTCTTTGCAGACACAGCACATGAGTGGACTAGTTTaGCAACCTTCTTCCAAGCAAACAAACTCAATGGCATGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFPYSLQTQHMSGLV*QPSSKQTNSMACTW Trigger: CCAGGTGCATGCCATTGAGTTTGTTTGCTTGGAAGAAGGTTGTCAAACTAGTCCACTCATGTGCTGTGTCTGCAAAGAATATGGAAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
||
| CDS CCA 90 bp | GTGACCTTGGTGCTTTCCATATTCTTTGCAGACACAGCACATGAGTaGACTAGTTTGACAACCTTCTTCCAAGCAAACAAACTCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VTLVLSIFFADTAHE*TSLTTFFQANKLNG Trigger: GCCATTGAGTTTGTTTGCTTGGAAGAAGGTTGTCAAACTAGTCCACTCATGTGCTGTGTCTGCAAAGAATATGGAAAGCACCAAGGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
||
| CDS-3UTR CAA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAGTGGAGACAGGCTGTaGAGACCTGGGACAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YILPIIFDGLFIVLAPKFSGDRL*RPGTRE Trigger: TTCTCTTGTCCCAGGTCTCAACAGCCTGTCTCCACT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CAA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACAAATGGGCAACGTATaGCTCTTCCATGCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLQMGNV*LFHAEA Trigger: TGCCTCTGCATGGAAGAGCAATACGTTGCCCATTTG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS TCA 90 bp | GAACAATCCCAACTAATTTTCTGGAATAATCTGAGATTTCCTCAGTaGAGGTCCGTATGCAGTGAGCCATGTCTAAAATTGATGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: EQSQLIFWNNLRFPQ*RSVCSEPCLKLMLG Trigger: TCCGAGCATCAATTTTAGACATGGCTCACTGCATACGGACCTTCACTGAGGAAATCTCAGATTATTCCAGAAAATTAGTTGGGATTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 |
||
| CDS-3UTR CAA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCATGAGTGGACTAGTTaGACAACCTTCTTCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YILPIIFDGLFIVLAPKFHEWTS*TTFFQA Trigger: TGCTTGGAAGAAGGTTGTCAAACTAGTCCACTCATG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CAA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAGTCATATCCTCTTGTaGCTGCCTAAGCCAAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: YILPIIFDGLFIVLAPKFSHILL*LPKPNQ Trigger: CTGATTTGGCTTAGGCAGCAACAAGAGGATATGACT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
||
| CDS-3UTR CAA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTTGGGACCTTGTGACCTaGGTGCTTTCCATATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YILPIIFDGLFIVLAPKFWDLVT*VLSIFF Trigger: AAAGAATATGGAAAGCACCAAGGTCACAAGGTCCCA...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069187.12 |
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| CDS-3UTR CAA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATGCTTTCCATATTCTTaGCAGACACAGCACATGAGT | + |
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Preference number: 5 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLCFPYS*QTQHMS Trigger: ACTCATGTGCTGTGTCTGCAAAGAATATGGAAAGCA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CAA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATCCATCTTCTACTATTaGTTCTCCTCCTTCAATGTG | + |
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Preference number: 5 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLSIFYY*FSSFNV Trigger: CACATTGAAGGAGGAGAACAAATAGTAGAAGATGGA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022225.12 |
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| CDS-3UTR CAA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTAATAGTCATATCCTCTaGTTGCTGCCTAAGCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: YILPIIFDGLFIVLAPKFNSHIL*LLPKPN Trigger: ATTTGGCTTAGGCAGCAACAAGAGGATATGACTATT...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CAA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTATTTCCGTTAACAACTTaGCAAGTTCACTGTGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLFPLTT*QVHCVL Trigger: AAGCACACAGTGAACTTGCAAAGTTGTTAACGGAAA...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CAA 90 bp | TACATACTGCCCATAATATTTGATGGGCTTTTTATAGTGCTGGCTCCTAAGTTTCCAGCTACATCCTGTTaGTTAGCAAAAATCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: YILPIIFDGLFIVLAPKFPATSC*LAKIKS Trigger: ACTCTTGATTTTTGCTAACAAACAGGATGTAGCTGG...AAACTTAGGAGCCAGCACTATAAAAAGCCCATCAAATATTATGGGCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS-3UTR CAA 90 bp | TTTTCATGTGACTTACGACACTTTACCAACAAAGGATGCACATTACTTAGCCTACCAGCTACATCCTGTTaGTTAGCAAAAATCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: FSCDLRHFTNKGCTLLSLPATSC*LAKIKS Trigger: ACTCTTGATTTTTGCTAACAAACAGGATGTAGCTGG...TAGGCTAAGTAATGTGCATCCTTTGTTGGTAAAGTGTCGTAAGTCACATGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS GCA 72 bp | CACACTCCAGAACCTTCACCACAGCCGTCCCCCGGCTaGCCTGCCGCCCACTGTCTACTCCGGCTCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HTPEPSPQPSPG*PAAHCLLRLRA Trigger: AGCCCGGAGCCGGAGTAGACAGTGGGCGGCAGGGCAGCCGGGGGACGGCTGTGGTGAAGGTTCTGGAGTGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069187.12 |
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| CDS TCA 72 bp | CAGATGCAACGTGAGCTTCATCTTCATCACAGCGAATaGTGCTCTCTCCAGATGTCCCAATGGCCTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QMQRELHLHHSE*CSLQMSQWPLL Trigger: CAGAAGAGGCCATTGGGACATCTGGAGAGAGCATCATTCGCTGTGATGAAGATGAAGCTCACGTTGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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| CDS TCA 72 bp | CCAGATGTCCCAATGGCCTCTTCTGCAGCTCCATACTaGCCAATGTGCCCATTTTGCAAACGTTCTAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: PDVPMASSAAPY*PMCPFCKRSKS Trigger: GCTTTTAGAACGTTTGCAAAATGGGCACATTGGTCAGTATGGAGCTGCAGAAGAGGCCATTGGGACATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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| CDS GCA 72 bp | AATGATGCTCTCTCCAGATGTCCCAATGGCCTCTTCTaGAGCTCCATACTGACCAATGTGCCCATTTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: NDALSRCPNGLF*SSILTNVPILQ Trigger: TTGCAAAATGGGCACATTGGTCAGTATGGAGCTGCAGAAGAGGCCATTGGGACATCTGGAGAGAGCATCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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| CDS CCA 72 bp | CAAACTCAATGGCATGCACCTGGTGCTGACAGCACATaGTTTTCTCATGAGGTTTATCAGCTAGAGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: QTQWHAPGADST*FSHEVYQLEAH Trigger: GTGTGCCTCTAGCTGATAAACCTCATGAGAAAACCATGTGCTGTCAGCACCAGGTGCATGCCATTGAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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| CDS TCA 72 bp | CGGGCATTCTCTGCAGTACCTGGGACATGTTCTGTGTaGGCCATTCCAATTCCATCTTCTACTATTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RAFSAVPGTCSV*AIPIPSSTICS Trigger: AGAACAAATAGTAGAAGATGGAATTGGAATGGCTCACACAGAACATGTCCCAGGTACTGCAGAGAATGCCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 |
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| CDS CAA 90 bp | GTGCTTTCCATATTCTTTGCAGACACAGCACATGAGTGGACTAGTTaGACAACCTTCTTCCAAGCAAACAAACTCAATGGCATGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: VLSIFFADTAHEWTS*TTFFQANKLNGMHL Trigger: CAGGTGCATGCCATTGAGTTTGTTTGCTTGGAAGAAGGTTGTCAAACTAGTCCACTCATGTGCTGTGTCTGCAAAGAATATGGAAAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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| CDS GCA 72 bp | GCACAAGTGAGTTGCACACACAGTGCAATATACAGATaGAACGTGAGCTTCATCTTCATCACAGCGAATGAT | + |
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Preference number: 6 (lower is better) Translates to: AQVSCTHSAIYR*NVSFIFITAND Trigger: ATCATTCGCTGTGATGAAGATGAAGCTCACGTTGCATCTGTATATTGCACTGTGTGTGCAACTCACTTGTGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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| CDS TCA 72 bp | TATTCTTTGCAGACACAGCACATGAGTGGACTAGTTTaGCAACCTTCTTCCAAGCAAACAAACTCAATGGCA | + |
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Preference number: 6 (lower is better) Translates to: YSLQTQHMSGLV*QPSSKQTNSMA Trigger: TGCCATTGAGTTTGTTTGCTTGGAAGAAGGTTGTCAAACTAGTCCACTCATGTGCTGTGTCTGCAAAGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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| CDS CAA 72 bp | ATATTCTTTGCAGACACAGCACATGAGTGGACTAGTTaGACAACCTTCTTCCAAGCAAACAAACTCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: IFFADTAHEWTS*TTFFQANKLNG Trigger: GCCATTGAGTTTGTTTGCTTGGAAGAAGGTTGTCAAACTAGTCCACTCATGTGCTGTGTCTGCAAAGAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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| CDS TCA 72 bp | CAACTAATTTTCTGGAATAATCTGAGATTTCCTCAGTaGAGGTCCGTATGCAGTGAGCCATGTCTAAAATTG | + |
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Preference number: 6 (lower is better) Translates to: QLIFWNNLRFPQ*RSVCSEPCLKL Trigger: CAATTTTAGACATGGCTCACTGCATACGGACCTTCACTGAGGAAATCTCAGATTATTCCAGAAAATTAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 |
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| CDS TCA 72 bp | GCAAGTTCACTGTGTGCTTCACTAATTCTGTCTCTATaGCTACTATCAACAACAAATACAACAGCTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: ASSLCASLILSL*LLSTTNTTACV Trigger: TACACAAGCTGTTGTATTTGTTGTTGATAGTAGTCATAGAGACAGAATTAGTGAAGCACACAGTGAACTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022225.12 ENSMUST00000069174.6 ENSMUST00000069187.12 |
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