Pregenerated sensors for TRIM21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030966Ensembl transcript IDs: ENSMUST00000033264.12, ENSMUST00000106913.3
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCTTTTAGATGAGTTTGGGTCCAATGTGAGGAGTCTGTTTCATTaGGGAATCATTGCGGAATCTATGTCAGGTATATTGATGGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: CLLDEFGSNVRSLFH*GIIAESMSGILMVK Trigger: CTTCACCATCAATATACCTGACATAGATTCCGCAATGATTCCTCAATGAAACAGACTCCTCACATTGGACCCAAACTCATCTAAAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR TCA 90 bp | CAAAGGAAGTCACATAAAGGCAGAAATGTTTGTTTGTCTTTTAGATaGGTTTGGGTCCAATGTGAGGAGTCTGTTTCATTGAGGAATCAT | + |
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Preference number: 1 (lower is better) Translates to: QRKSHKGRNVCLSFR*VWVQCEESVSLRNH Trigger: ATGATTCCTCAATGAAACAGACTCCTCACATTGGACCCAAACTCATCTAAAAGACAAACAAACATTTCTGCCTTTATGTGACTTCCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCAACACCAACAGGAAGTaGGCAGCAGTATCCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTNTNRK*AAVSRN Trigger: ATTTCTGGATACTGCTGCTCACTTCCTGTTGGTGTT...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | AATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTGTCTGAGCACAGCTGGAGTCACTGGATCTTaGTCAGGACAGGGAGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: NQKPTYPQNDSRQCLSTAGVTGS*SGQGGG Trigger: ACCTCCTCCCTGTCCTGATCAAGATCCAGTGACTCC...AGCTGTGCTCAGACACTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCGACCAAGTGCATGGCTaGAGAACACCAACAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TQTLAITGDTEHTVSVTFDQVHG*RTPTGS Trigger: ACTTCCTGTTGGTGTTCTTCAGCCATGCACTTGGTC...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGAGACCAAGTGCATGGCTaGAGAACACCAACAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: RSFDIDFQLCPADTFILGDQVHG*RTPTGS Trigger: ACTTCCTGTTGGTGTTCTTCAGCCATGCACTTGGTC...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | AATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTGTCTGAGCACAGCTCTAGATGGGTCAAAATaGCCAAGTGCATGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: NQKPTYPQNDSRQCLSTALDGSK*PSAWLK Trigger: CTTCAGCCATGCACTTGGTCATTTTGACCCATCTAG...AGCTGTGCTCAGACACTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | GGAATCTATGTCAGGTATATTGATGGTGAAGGTCATTTGACATTGACTTTCAGTGGAGTCACTGGATCTTaGTCAGGACAGGGAGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: GIYVRYIDGEGHLTLTFSGVTGS*SGQGGG Trigger: ACCTCCTCCCTGTCCTGATCAAGATCCAGTGACTCC...ACTGAAAGTCAATGTCAAATGACCTTCACCATCAATATACCTGACATAGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGACTAGATGGGTCAAAATaGCCAAGTGCATGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RSFDIDFQLCPADTFILGLDGSK*PSAWLK Trigger: CTTCAGCCATGCACTTGGTCATTTTGACCCATCTAG...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCTGTTTGTCTTTTAGATaGGTTTGGGTCCAATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TQTLAITGDTEHTVSVTFCLSFR*VWVQCE Trigger: CTCACATTGGACCCAAACTCATCTAAAAGACAAACA...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCCTTCTGCAAGCCACAAAAGATATAGGAGTAGACAGGTATCTAGCCAAAGTCAAAATGACCAAGTaGATGGCTGAAGAACACCAA | + |
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Preference number: 2 (lower is better) Translates to: EVLLQATKDIGVDRYLAKVKMTK*MAEEHQ Trigger: TTGGTGTTCTTCAGCCATGCACTTGGTCATTTTGAC...TTTGGCTAGATACCTGTCTACTCCTATATCTTTTGTGGCTTGCAGAAGGACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCTCATTGAGGAATCATTaGGGAATCTATGTCAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: TQTLAITGDTEHTVSVTFSLRNH*GIYVRY Trigger: ATACCTGACATAGATTCCGCAATGATTCCTCAATGA...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCAAGATATTCTTGACCTaGGTTTACAGAAGAAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: TQTLAITGDTEHTVSVTFKIFLT*VYRRSA Trigger: TGCACTTCTTCTGTAAACCCAGGTCAAGAATATCTT...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTGTTTGTCTTTTAGATaGGTTTGGGTCCAATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQCLSFR*VWVQCE Trigger: CTCACATTGGACCCAAACTCATCTAAAAGACAAACA...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGCATTCAGCTCTTGTCTaGACCACTTTCACTACTTTA | + |
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Preference number: 2 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQHSALV*TTFTTL Trigger: TAAAGTAGTGAAAGTGGTTCAGACAAGAGCTGAATG...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGCATAGAAGATATTCTTaGCCTGGGTTTACAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQHRRYS*PGFTEE Trigger: TTCTTCTGTAAACCCAGGTCAAGAATATCTTCTATG...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR CCA 90 bp | AATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTGTCTGAGCACAGCTTTCACTACTTTATCCTaGCTTTCATTTGTTCCCATA | + |
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Preference number: 2 (lower is better) Translates to: NQKPTYPQNDSRQCLSTAFTTLS*LSFVPI Trigger: TATGGGAACAAATGAAAGCCAGGATAAAGTAGTGAA...AGCTGTGCTCAGACACTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR GCA 90 bp | GGAATCTATGTCAGGTATATTGATGGTGAAGGTCATTTGACATTGACTTTCAGTGTCAAAATGACCAAGTaGATGGCTGAAGAACACCAA | + |
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Preference number: 2 (lower is better) Translates to: GIYVRYIDGEGHLTLTFSVKMTK*MAEEHQ Trigger: TTGGTGTTCTTCAGCCATGCACTTGGTCATTTTGAC...ACTGAAAGTCAATGTCAAATGACCTTCACCATCAATATACCTGACATAGATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR CCA 72 bp | GGTTCACTGACCAGACCCAGCACAGCACCCAGACTTTaGCTATCACTGGGGATACTGAGCATACTGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GSLTRPSTAPRL*LSLGILSILSV Trigger: CACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGTGCTGTGCTGGGTCTGGTCAGTGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR TCA 72 bp | AGTATCCAGAAATGGTCCCCAGGAGTCACTGGATCTTaGTCAGGACAGGGAGGAGGTAAGTGTCCGGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: SIQKWSPGVTGS*SGQGGGKCPGS Trigger: ACTTCCCGGACACTTACCTCCTCCCTGTCCTGATCAAGATCCAGTGACTCCTGGGGACCATTTCTGGATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR GCA 72 bp | AGGGTAGTTCCAACTAGATGGGTCAAAATGACCAAGTaGATGGCTGAAGAACACCAACAGGAAGTGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RVVPTRWVKMTK*MAEEHQQEVSS Trigger: GCTGCTCACTTCCTGTTGGTGTTCTTCAGCCATGCACTTGGTCATTTTGACCCATCTAGTTGGAACTACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCGATGGTGAAGGTCATTaGACATTGACTTTCAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTDGEGH*TLTFSY Trigger: ATAACTGAAAGTCAATGTCAAATGACCTTCACCATC...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR TCA 72 bp | AAGGCAATGGAATCAGAAACCAACATATCCACAAAATaGCAGCAGGCAGTGTCTGAGCACAGCTGTTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: KAMESETNISTK*QQAVSEHSCCS Trigger: GCTACAACAGCTGTGCTCAGACACTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR CAA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCGAAGGTCATTTGACATaGACTTTCAGTTATGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TQTLAITGDTEHTVSVTFEGHLT*TFSYVQ Trigger: CTGGACATAACTGAAAGTCAATGTCAAATGACCTTC...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGGAGGAGTCTGTTTCATaGAGGAATCATTGCGGAATC | + |
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Preference number: 3 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQEESVS*RNHCGI Trigger: GATTCCGCAATGATTCCTCAATGAAACAGACTCCTC...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR GCA 72 bp | GTCCAATGTGAGGAGTCTGTTTCATTGAGGAATCATTaGGGAATCTATGTCAGGTATATTGATGGTGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: VQCEESVSLRNH*GIYVRYIDGEG Trigger: ACCTTCACCATCAATATACCTGACATAGATTCCGCAATGATTCCTCAATGAAACAGACTCCTCACATTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGGAAGGTCATTTGACATaGACTTTCAGTTATGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQEGHLT*TFSYVQ Trigger: CTGGACATAACTGAAAGTCAATGTCAAATGACCTTC...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR-3UTR CAA 90 bp | AATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTGTCTGAGCACAGCTGATGGTGAAGGTCATTaGACATTGACTTTCAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: NQKPTYPQNDSRQCLSTADGEGH*TLTFSY Trigger: ATAACTGAAAGTCAATGTCAAATGACCTTCACCATC...AGCTGTGCTCAGACACTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR TCA 72 bp | ATCCTGGCTTTCATTTGTTCCCATAGAAGATATTCTTaGCCTGGGTTTACAGAAGAAGTGCATAGAGCATTC | + |
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Preference number: 3 (lower is better) Translates to: ILAFICSHRRYS*PGFTEEVHRAF Trigger: GAATGCTCTATGCACTTCTTCTGTAAACCCAGGTCAAGAATATCTTCTATGGGAACAAATGAAAGCCAGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR TCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCATGTGGAGGGTGGTCTaGGGACTGGTACCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTMWRVV*GLVPAS Trigger: TGAGGCTGGTACCAGTCCTCAGACCACCCTCCACAT...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCCCAGAGGAGAATCTCTaGGCACCTAGCACCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTPEENL*APSTMG Trigger: CCCCATGGTGCTAGGTGCCCAGAGATTCTCCTCTGG...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| 3UTR CAA 72 bp | GGGTTCACTGACCAGACCCAGCACAGCACCCAGACTTaGGCTATCACTGGGGATACTGAGCATACTGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GFTDQTQHSTQT*AITGDTEHTVS Trigger: ACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGTGCTGTGCTGGGTCTGGTCAGTGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR TCA 90 bp | CAACAGGAAGTGAGCAGCAGTATCCAGAAATGGTCCCCAGGAGTCACTGGATCTCTCAGGTACTCCCTTTaGTCCTTCTCCAGCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QQEVSSSIQKWSPGVTGSLRYSL*SFSSLC Trigger: GCAGAGGCTGGAGAAGGATCAAAGGGAGTACCTGAG...AGATCCAGTGACTCCTGGGGACCATTTCTGGATACTGCTGCTCACTTCCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR TCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCCACTCCTTTCCAGGATaGTCCTCACCTCCTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTHSFPG*SSPPAV Trigger: TACTGCAGGAGGTGAGGATCATCCTGGAAAGGAGTG...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR GCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCCCATGCTTCATGCAGTaGGTTTCCTGGGTACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTPCFMQ*VSWVLF Trigger: GAAGAGTACCCAGGAAACGCACTGCATGAAGCATGG...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR TCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCTCCTCACAGAATAGGTaGAGCTTCTCTCCATGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTSSQNR*SFSPCF Trigger: GAAGCATGGAGAGAAGCTTCACCTATTCTGTGAGGA...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR TCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGCCTCCTCTCCAGCTCTaGGATCAGCTCCTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQPPLQL*DQLLQG Trigger: GCCCTGCAGGAGCTGATCTCAGAGCTGGAGAGGAGG...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR TCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCAACTGCCCTTTCCTCTaGACAGAATCTCTGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTNCPFL*TESLQT Trigger: GGTTTGCAGAGATTCTGTTCAGAGGAAAGGGCAGTT...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR GCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCCAAGCTATTCTGAAGTaGGAACTCTGCGTGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTQAILK*ELCVNP Trigger: AGGATTCACGCAGAGTTCGCACTTCAGAATAGCTTG...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CCA 90 bp | AATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTGTCTGAGCACAGCTCGGTGTTTCCCAGACTaGGCACACACCCAGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: NQKPTYPQNDSRQCLSTARCFPD*AHTQQR Trigger: CCTTTGCTGGGTGTGTGCCCAGTCTGGGAAACACCG...AGCTGTGCTCAGACACTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR TCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGATGTGGAGGGTGGTCTaGGGACTGGTACCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQMWRVV*GLVPAS Trigger: TGAGGCTGGTACCAGTCCTCAGACCACCCTCCACAT...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR GCA 90 bp | CAACAGGAAGTGAGCAGCAGTATCCAGAAATGGTCCCCAGGAGTCACTGGATCTCAAGCTATTCTGAAGTaGGAACTCTGCGTGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: QQEVSSSIQKWSPGVTGSQAILK*ELCVNP Trigger: AGGATTCACGCAGAGTTCGCACTTCAGAATAGCTTG...AGATCCAGTGACTCCTGGGGACCATTTCTGGATACTGCTGCTCACTTCCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGCGGTGTTTCCCAGACTaGGCACACACCCAGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQRCFPD*AHTQQR Trigger: CCTTTGCTGGGTGTGTGCCCAGTCTGGGAAACACCG...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CCA 90 bp | GAAGTCCTTCTGCAAGCCACAAAAGATATAGGAGTAGACAGGTATCTAGCCAAACCAGAGGAGAATCTCTaGGCACCTAGCACCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVLLQATKDIGVDRYLAKPEENL*APSTMG Trigger: CCCCATGGTGCTAGGTGCCCAGAGATTCTCCTCTGG...TTTGGCTAGATACCTGTCTACTCCTATATCTTTTGTGGCTTGCAGAAGGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGCTCAGGTACTCCCTTTaGTCCTTCTCCAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQLRYSL*SFSSLC Trigger: GCAGAGGCTGGAGAAGGATCAAAGGGAGTACCTGAG...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR TCA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCATTCTCGGGACTGAGTaGAAACTGCCCTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQTLAITGDTEHTVSVTFILGTE*KLPFPL Trigger: CAGAGGAAAGGGCAGTTTTCACTCAGTCCCGAGAAT...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR GCA 90 bp | AATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTGTCTGAGCACAGCTACCCAGCAAAGGGCCTaGCCATCTTCCTCACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NQKPTYPQNDSRQCLSTATQQRA*PSSSQN Trigger: ATTCTGTGAGGAAGATGGGCAGGCCCTTTGCTGGGT...AGCTGTGCTCAGACACTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR GCA 90 bp | GGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGACTCTGAGATCAGCTCCTaGAGGGCCTGGTTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHLTLTFSYVQLIPSSWDSEISS*RAWFFS Trigger: TGAGAAGAACCAGGCCCTGCAGGAGCTGATCTCAGA...GTCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR TCA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCTCCTCACAGAATAGGTaGAGCTTCTCTCCATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQTLAITGDTEHTVSVTFSSQNR*SFSPCF Trigger: GAAGCATGGAGAGAAGCTTCACCTATTCTGTGAGGA...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR TCA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGACACTCCTTTCCAGGATaGTCCTCACCTCCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSFDIDFQLCPADTFILGHSFPG*SSPPAV Trigger: TACTGCAGGAGGTGAGGATCATCCTGGAAAGGAGTG...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR GCA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGAACCCAGCAAAGGGCCTaGCCATCTTCCTCACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSFDIDFQLCPADTFILGTQQRA*PSSSQN Trigger: ATTCTGTGAGGAAGATGGGCAGGCCCTTTGCTGGGT...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR TCA 90 bp | AATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTGTCTGAGCACAGCTAACTGCCCTTTCCTCTaGACAGAATCTCTGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: NQKPTYPQNDSRQCLSTANCPFL*TESLQT Trigger: GGTTTGCAGAGATTCTGTTCAGAGGAAAGGGCAGTT...AGCTGTGCTCAGACACTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGCCGAGAAGGTGTAAATaGGGGAGCCATGGTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQPRRCK*GSHGQL Trigger: TAACTGACCATGGCTCCCTCATTTACACCTTCTCGG...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR GCA 90 bp | TCTGAGCACAGCTGTTGTAGCCTTGTGAGAGTCAACAGCAGGGGTTCACTGACCTCCCAACTTCAAAAATaGATTCCTTGCAAAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SEHSCCSLVRVNSRGSLTSQLQK*IPCKSN Trigger: ATTGCTTTTGCAAGGAATGCATTTTTGAAGTTGGGA...GGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAACAGCTGTGCTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGCCATGCTTCATGCAGTaGGTTTCCTGGGTACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQPCFMQ*VSWVLF Trigger: GAAGAGTACCCAGGAAACGCACTGCATGAAGCATGG...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR GCA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCTTCCAGTCTGTTCTTTaGATCGTGAGATCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQTLAITGDTEHTVSVTFFQSVL*IVRSIS Trigger: GGAAATGGATCTCACGATGCAAAGAACAGACTGGAA...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR CCA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGAACGTGGATCTTCTCCTaGTATACCTTAGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSFDIDFQLCPADTFILGTWIFS*YTLAAS Trigger: AGAGGCTGCTAAGGTATACCAGGAGAAGATCCACGT...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CCA 90 bp | GAAGTCCTTCTGCAAGCCACAAAAGATATAGGAGTAGACAGGTATCTAGCCAAAACGTGGATCTTCTCCTaGTATACCTTAGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVLLQATKDIGVDRYLAKTWIFS*YTLAAS Trigger: AGAGGCTGCTAAGGTATACCAGGAGAAGATCCACGT...TTTGGCTAGATACCTGTCTACTCCTATATCTTTTGTGGCTTGCAGAAGGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR GCA 90 bp | GGAATCTATGTCAGGTATATTGATGGTGAAGGTCATTTGACATTGACTTTCAGTTCTGAGATCAGCTCCTaGAGGGCCTGGTTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GIYVRYIDGEGHLTLTFSSEISS*RAWFFS Trigger: TGAGAAGAACCAGGCCCTGCAGGAGCTGATCTCAGA...ACTGAAAGTCAATGTCAAATGACCTTCACCATCAATATACCTGACATAGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CCA 90 bp | GAAGTCCTTCTGCAAGCCACAAAAGATATAGGAGTAGACAGGTATCTAGCCAAAATGCAGTGCGTTTCCTaGGTACTCTTCTTGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: EVLLQATKDIGVDRYLAKMQCVS*VLFLVF Trigger: GAATACCAAGAAGAGTACCCAGGAAACGCACTGCAT...TTTGGCTAGATACCTGTCTACTCCTATATCTTTTGTGGCTTGCAGAAGGACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGATGCAGTGCGTTTCCTaGGTACTCTTCTTGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQMQCVS*VLFLVF Trigger: GAATACCAAGAAGAGTACCCAGGAAACGCACTGCAT...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR TCA 90 bp | GGAATCTATGTCAGGTATATTGATGGTGAAGGTCATTTGACATTGACTTTCAGTATTCTCGGGACTGAGTaGAAACTGCCCTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIYVRYIDGEGHLTLTFSILGTE*KLPFPL Trigger: CAGAGGAAAGGGCAGTTTTCACTCAGTCCCGAGAAT...ACTGAAAGTCAATGTCAAATGACCTTCACCATCAATATACCTGACATAGATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR GCA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGATTCCAGTCTGTTCTTTaGATCGTGAGATCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSFDIDFQLCPADTFILGFQSVL*IVRSIS Trigger: GGAAATGGATCTCACGATGCAAAGAACAGACTGGAA...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CCA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGACTCTTCTTGGTATTCTaGGCTATCTGTTTAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSFDIDFQLCPADTFILGLFLVF*AICLRF Trigger: AAACCTTAAACAGATAGCCCAGAATACCAAGAAGAG...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR GCA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGATCCCAACTTCAAAAATaGATTCCTTGCAAAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSFDIDFQLCPADTFILGSQLQK*IPCKSN Trigger: ATTGCTTTTGCAAGGAATGCATTTTTGAAGTTGGGA...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR GCA 90 bp | GGAATCTATGTCAGGTATATTGATGGTGAAGGTCATTTGACATTGACTTTCAGTCAAAAATGCATTCCTTaGAAAAGCAATGGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: GIYVRYIDGEGHLTLTFSQKCIP*KSNGHI Trigger: AATGTGGCCATTGCTTTTGCAAGGAATGCATTTTTG...ACTGAAAGTCAATGTCAAATGACCTTCACCATCAATATACCTGACATAGATTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 90 bp | GCCTCTTCAATAGGGACCCTGGTGTGGTCCCGGTGTTTCCCAGACTaGGCACACACCCAGCAAAGGGCCTGCCCATCTTCCTCACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASSIGTLVWSRCFPD*AHTQQRACPSSSQN Trigger: ATTCTGTGAGGAAGATGGGCAGGCCCTTTGCTGGGTGTGTGCCCAGTCTGGGAAACACCGGGACCACACCAGGGTCCCTATTGAAGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 90 bp | TTCTCCTGGTATACCTTAGCAGCCTCTTCAATAGGGACCCTGGTGTaGTCCCGGTGTTTCCCAGACTGGGCACACACCCAGCAAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSWYTLAASSIGTLV*SRCFPDWAHTQQRA Trigger: GGCCCTTTGCTGGGTGTGTGCCCAGTCTGGGAAACACCGGGACCACACCAGGGTCCCTATTGAAGAGGCTGCTAAGGTATACCAGGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 90 bp | TCCAGGTTCCAGGATCCACTCCTTTCCAGGATGATCCTCACCTCCTaGAGTAGCTCCAGCTCTGAACCACGAATCCTCCTCTCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRFQDPLLSRMILTS*SSSSSEPRILLSSS Trigger: AGAGCTGGAGAGGAGGATTCGTGGTTCAGAGCTGGAGCTACTGCAGGAGGTGAGGATCATCCTGGAAAGGAGTGGATCCTGGAACCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 90 bp | CCCAACATGTCCTCAGCATCTTCTTCCGCCCTGGCACAGGGCATGTaGTTGTTAGGTCTGGGGCGTCAATATCTAACGTGTCCAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNMSSASSSALAQGM*LLGLGRQYLTCPGS Trigger: GGAACCTGGACACGTTAGATATTGACGCCCCAGACCTAACAAGCACATGCCCTGTGCCAGGGCGGAAGAAGATGCTGAGGACATGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 90 bp | GGGCCTGAGGTTTCGGAGCAGAAACTGTTGCCGGCACTCGGGACATaGACTGCCCCCATTCTTCCCAACTTCAAAAATGCATTCCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPEVSEQKLLPALGT*TAPILPNFKNAFLA Trigger: TGCAAGGAATGCATTTTTGAAGTTGGGAAGAATGGGGGCAGTTCATGTCCCGAGTGCCGGCAACAGTTTCTGCTCCGAAACCTCAGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 90 bp | GAGATGATGAGCCATGAGTTGGCGGTGTTGCGATCCAGAGTAATATaGACCCAACATGTCCTCAGCATCTTCTTCCGCCCTGGCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EMMSHELAVLRSRVI*TQHVLSIFFRPGTG Trigger: CCCTGTGCCAGGGCGGAAGAAGATGCTGAGGACATGTTGGGTTCATATTACTCTGGATCGCAACACCGCCAACTCATGGCTCATCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 90 bp | CAATATCTAACGTGTCCAGGTTCCAGGATCCACTCCTTTCCAGGATaGTCCTCACCTCCTGCAGTAGCTCCAGCTCTGAACCACGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: QYLTCPGSRIHSFPG*SSPPAVAPALNHES Trigger: GGATTCGTGGTTCAGAGCTGGAGCTACTGCAGGAGGTGAGGATCATCCTGGAAAGGAGTGGATCCTGGAACCTGGACACGTTAGATATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 90 bp | TTGGCTATATGTCTATTGGGCCTGAGGTTTCGGAGCAGAAACTGTTaGCGGCACTCGGGACATGAACTGCCCCCATTCTTCCCAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAICLLGLRFRSRNC*RHSGHELPPFFPTS Trigger: TGAAGTTGGGAAGAATGGGGGCAGTTCATGTCCCGAGTGCCGGCAACAGTTTCTGCTCCGAAACCTCAGGCCCAATAGACATATAGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CAA 90 bp | CAACAGGAAGTGAGCAGCAGTATCCAGAAATGGTCCCCAGGAGTCACTGGATCTTCTCAGGTACTCCCTTaGATCCTTCTCCAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQEVSSSIQKWSPGVTGSSQVLP*ILLQPL Trigger: CAGAGGCTGGAGAAGGATCAAAGGGAGTACCTGAGA...AGATCCAGTGACTCCTGGGGACCATTTCTGGATACTGCTGCTCACTTCCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 90 bp | CAATTTGGCATGGAGGTACTTGAATGTGGAGGGTGGTCTGAGGACTaGTACCAGCCTCATAGCTGTCTTGCCATAACCAAATGGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QFGMEVLECGGWSED*YQPHSCLAITKWSR Trigger: TCTGGACCATTTGGTTATGGCAAGACAGCTATGAGGCTGGTACCAGTCCTCAGACCACCCTCCACATTCAAGTACCTCCATGCCAAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 90 bp | ATCCTCGACTTCTGGGTGTCAATGTTCCTCTTCCAGTCTGTTCTTTaGATCGTGAGATCCATTTCCATCTTCTCGGCCAACTCTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILDFWVSMFLFQSVL*IVRSISIFSANSFP Trigger: GGGGAAAGAGTTGGCCGAGAAGATGGAAATGGATCTCACGATGCAAAGAACAGACTGGAAGAGGAACATTGACACCCAGAAGTCGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 90 bp | TCTTTCCCCTTTCTCAGTTTTTCTAAAGCCACGTGGATCTTCTCCTaGTATACCTTAGCAGCCTCTTCAATAGGGACCCTGGTGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFPFLSFSKATWIFS*YTLAASSIGTLVWS Trigger: GGACCACACCAGGGTCCCTATTGAAGAGGCTGCTAAGGTATACCAGGAGAAGATCCACGTGGCTTTAGAAAAACTGAGAAAGGGGAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CAA 90 bp | ACCCAGACTTTGGCTATCACTGGGGATACTGAGCATACTGTCAGTGTAACATTCTTGGCATGGAGGTACTaGAATGTGGAGGGTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQTLAITGDTEHTVSVTFLAWRY*NVEGGL Trigger: CAGACCACCCTCCACATTCAAGTACCTCCATGCCAA...GAATGTTACACTGACAGTATGCTCAGTATCCCCAGTGATAGCCAAAGTCTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 90 bp | TTCTCGGCCAACTCTTTCCCCTTTCTCAGTTTTTCTAAAGCCACGTaGATCTTCTCCTGGTATACCTTAGCAGCCTCTTCAATAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: FSANSFPFLSFSKAT*IFSWYTLAASSIGT Trigger: GGTCCCTATTGAAGAGGCTGCTAAGGTATACCAGGAGAAGATCCACGTGGCTTTAGAAAAACTGAGAAAGGGGAAAGAGTTGGCCGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CAA 90 bp | GGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGACATCCCAGGCCTCCTTTaGAGTCACATCTACCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GHLTLTFSYVQLIPSSWDIPGLL*SHIYLP Trigger: TGGGAGGTAGATGTGACTCAAAAGGAGGCCTGGGAT...GTCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 90 bp | ACTTCTGGGTGTCAATGTTCCTCTTCCAGTCTGTTCTTTGCATCGTaGGATCCATTTCCATCTTCTCGGCCAACTCTTTCCCCTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSGCQCSSSSLFFAS*DPFPSSRPTLSPFS Trigger: TGAGAAAGGGGAAAGAGTTGGCCGAGAAGATGGAAATGGATCTCACGATGCAAAGAACAGACTGGAAGAGGAACATTGACACCCAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CAA 90 bp | GAAGTCCTTCTGCAAGCCACAAAAGATATAGGAGTAGACAGGTATCTAGCCAAAATCCCAGGCCTCCTTTaGAGTCACATCTACCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EVLLQATKDIGVDRYLAKIPGLL*SHIYLP Trigger: TGGGAGGTAGATGTGACTCAAAAGGAGGCCTGGGAT...TTTGGCTAGATACCTGTCTACTCCTATATCTTTTGTGGCTTGCAGAAGGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTTGGCTATATGTCTATaGGGCCTGAGGTTTCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQLAICL*GLRFRS Trigger: GCTCCGAAACCTCAGGCCCAATAGACATATAGCCAA...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR CAA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGATTGGCTATATGTCTATaGGGCCTGAGGTTTCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSFDIDFQLCPADTFILGLAICL*GLRFRS Trigger: GCTCCGAAACCTCAGGCCCAATAGACATATAGCCAA...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGTCCTGGGTACTCTTCTaGGTATTCTGGGCTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQSWVLF*VFWAIC Trigger: ACAGATAGCCCAGAATACCAAGAAGAGTACCCAGGA...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
||
| CDS-3UTR CAA 90 bp | AGGTCATTTGACATTGACTTTCAGTTATGTCCAGCTGATACCTTCATCCTGGGATCCTGGGTACTCTTCTaGGTATTCTGGGCTATCTGT | + |
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Preference number: 5 (lower is better) Translates to: RSFDIDFQLCPADTFILGSWVLF*VFWAIC Trigger: ACAGATAGCCCAGAATACCAAGAAGAGTACCCAGGA...TCCCAGGATGAAGGTATCAGCTGGACATAACTGAAAGTCAATGTCAAATGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CAA 90 bp | TCTTCAAGGCAATGGAATCAGAAACCAACATATCCACAAAATGACAGCAGGCAGAGGTTTTCCACCATGTaGGCTATATGTCTATTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SSRQWNQKPTYPQNDSRQRFSTM*AICLLG Trigger: GCCCAATAGACATATAGCCAACATGGTGGAAAACCT...CTGCCTGCTGTCATTTTGTGGATATGTTGGTTTCTGATTCCATTGCCTTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CAA 90 bp | GGAATCTATGTCAGGTATATTGATGGTGAAGGTCATTTGACATTGACTTTCAGTTTGGCATGGAGGTACTaGAATGTGGAGGGTGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GIYVRYIDGEGHLTLTFSLAWRY*NVEGGL Trigger: CAGACCACCCTCCACATTCAAGTACCTCCATGCCAA...ACTGAAAGTCAATGTCAAATGACCTTCACCATCAATATACCTGACATAGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CAA 90 bp | GAAGTCCTTCTGCAAGCCACAAAAGATATAGGAGTAGACAGGTATCTAGCCAAATCAAAAATGCATTCCTaGCAAAAGCAATGGCCACAT | + |
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Preference number: 5 (lower is better) Translates to: EVLLQATKDIGVDRYLAKSKMHS*QKQWPH Trigger: ATGTGGCCATTGCTTTTGCAAGGAATGCATTTTTGA...TTTGGCTAGATACCTGTCTACTCCTATATCTTTTGTGGCTTGCAGAAGGACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS-3UTR CAA 90 bp | GGAATCTATGTCAGGTATATTGATGGTGAAGGTCATTTGACATTGACTTTCAGTTCAAAAATGCATTCCTaGCAAAAGCAATGGCCACAT | + |
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Preference number: 5 (lower is better) Translates to: GIYVRYIDGEGHLTLTFSSKMHS*QKQWPH Trigger: ATGTGGCCATTGCTTTTGCAAGGAATGCATTTTTGA...ACTGAAAGTCAATGTCAAATGACCTTCACCATCAATATACCTGACATAGATTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 72 bp | ATAGGGACCCTGGTGTGGTCCCGGTGTTTCCCAGACTaGGCACACACCCAGCAAAGGGCCTGCCCATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: IGTLVWSRCFPD*AHTQQRACPSS Trigger: GGAAGATGGGCAGGCCCTTTGCTGGGTGTGTGCCCAGTCTGGGAAACACCGGGACCACACCAGGGTCCCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 72 bp | ACGTGTCCAGGTTCCAGGATCCACTCCTTTCCAGGATaGTCCTCACCTCCTGCAGTAGCTCCAGCTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: TCPGSRIHSFPG*SSPPAVAPALN Trigger: GTTCAGAGCTGGAGCTACTGCAGGAGGTGAGGATCATCCTGGAAAGGAGTGGATCCTGGAACCTGGACACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 72 bp | CAGGATCCACTCCTTTCCAGGATGATCCTCACCTCCTaGAGTAGCTCCAGCTCTGAACCACGAATCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QDPLLSRMILTS*SSSSSEPRILL Trigger: GAGGAGGATTCGTGGTTCAGAGCTGGAGCTACTGCAGGAGGTGAGGATCATCCTGGAAAGGAGTGGATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 90 bp | AACATGTCCTCAGCATCTTCTTCCGCCCTGGCACAGGGCATGTGCTaGTTAGGTCTGGGGCGTCAATATCTAACGTGTCCAGGTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: NMSSASSSALAQGMC*LGLGRQYLTCPGSR Trigger: CCTGGAACCTGGACACGTTAGATATTGACGCCCCAGACCTAACAAGCACATGCCCTGTGCCAGGGCGGAAGAAGATGCTGAGGACATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 72 bp | CCATTCTCGGGACTGAGTGAAAACTGCCCTTTCCTCTaGACAGAATCTCTGCAAACCCCCAGATCCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PFSGLSENCPFL*TESLQTPRSQA Trigger: GGCCTGGGATCTGGGGGTTTGCAGAGATTCTGTTCAGAGGAAAGGGCAGTTTTCACTCAGTCCCGAGAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 72 bp | TCCTCAGCATCTTCTTCCGCCCTGGCACAGGGCATGTaGTTGTTAGGTCTGGGGCGTCAATATCTAACGTGT | + |
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Preference number: 6 (lower is better) Translates to: SSASSSALAQGM*LLGLGRQYLTC Trigger: ACACGTTAGATATTGACGCCCCAGACCTAACAAGCACATGCCCTGTGCCAGGGCGGAAGAAGATGCTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 72 bp | TCAGCATCTTCTTCCGCCCTGGCACAGGGCATGTGCTaGTTAGGTCTGGGGCGTCAATATCTAACGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SASSSALAQGMC*LGLGRQYLTCP Trigger: TGGACACGTTAGATATTGACGCCCCAGACCTAACAAGCACATGCCCTGTGCCAGGGCGGAAGAAGATGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 72 bp | GGTTTTCCACCATGTTGGCTATATGTCTATTGGGCCTaGGGTTTCGGAGCAGAAACTGTTGCCGGCACTCGG | + |
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Preference number: 6 (lower is better) Translates to: GFPPCWLYVYWA*GFGAETVAGTR Trigger: CCGAGTGCCGGCAACAGTTTCTGCTCCGAAACCTCAGGCCCAATAGACATATAGCCAACATGGTGGAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 90 bp | GCCAGCCTCATAGTCCACAAAGATCCCAATTTGGCATGGAGGTACTaGAATGTGGAGGGTGGTCTGAGGACTGGTACCAGCCTCATAGCT | + |
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Preference number: 6 (lower is better) Translates to: ASLIVHKDPNLAWRY*NVEGGLRTGTSLIA Trigger: AGCTATGAGGCTGGTACCAGTCCTCAGACCACCCTCCACATTCAAGTACCTCCATGCCAAATTGGGATCTTTGTGGACTATGAGGCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 72 bp | GTTTCGGAGCAGAAACTGTTGCCGGCACTCGGGACATaGACTGCCCCCATTCTTCCCAACTTCAAAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: VSEQKLLPALGT*TAPILPNFKNA Trigger: TGCATTTTTGAAGTTGGGAAGAATGGGGGCAGTTCATGTCCCGAGTGCCGGCAACAGTTTCTGCTCCGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 72 bp | AGCCATGAGTTGGCGGTGTTGCGATCCAGAGTAATATaGACCCAACATGTCCTCAGCATCTTCTTCCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SHELAVLRSRVI*TQHVLSIFFRP Trigger: AGGGCGGAAGAAGATGCTGAGGACATGTTGGGTTCATATTACTCTGGATCGCAACACCGCCAACTCATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 72 bp | GGAGCAGAAACTGTTGCCGGCACTCGGGACATGAACTaGCCCCATTCTTCCCAACTTCAAAAATGCATTCCT | + |
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Preference number: 6 (lower is better) Translates to: GAETVAGTRDMN*PHSSQLQKCIP Trigger: AGGAATGCATTTTTGAAGTTGGGAAGAATGGGGGCAGTTCATGTCCCGAGTGCCGGCAACAGTTTCTGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 72 bp | GCCAGCCTCATAGTCCACAAAGATCCCAATTTGGCATaGAGGTACTTGAATGTGGAGGGTGGTCTGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: ASLIVHKDPNLA*RYLNVEGGLRT Trigger: AGTCCTCAGACCACCCTCCACATTCAAGTACCTCCATGCCAAATTGGGATCTTTGTGGACTATGAGGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 90 bp | TGGGCTATCTGTTTAAGGTTTTCCACCATGTTGGCTATATGTCTATaGGGCCTGAGGTTTCGGAGCAGAAACTGTTGCCGGCACTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: WAICLRFSTMLAICL*GLRFRSRNCCRHSG Trigger: TCCCGAGTGCCGGCAACAGTTTCTGCTCCGAAACCTCAGGCCCAATAGACATATAGCCAACATGGTGGAAAACCTTAAACAGATAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 72 bp | ATGGAGGTACTTGAATGTGGAGGGTGGTCTGAGGACTaGTACCAGCCTCATAGCTGTCTTGCCATAACCAAA | + |
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Preference number: 6 (lower is better) Translates to: MEVLECGGWSED*YQPHSCLAITK Trigger: TTTGGTTATGGCAAGACAGCTATGAGGCTGGTACCAGTCCTCAGACCACCCTCCACATTCAAGTACCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 90 bp | AATCCTCGACTTCTGGGTGTCAATGTTCCTCTTCCAGTCTGTTCTTaGCATCGTGAGATCCATTTCCATCTTCTCGGCCAACTCTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: NPRLLGVNVPLPVCS*HREIHFHLLGQLFP Trigger: GGGAAAGAGTTGGCCGAGAAGATGGAAATGGATCTCACGATGCAAAGAACAGACTGGAAGAGGAACATTGACACCCAGAAGTCGAGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 90 bp | AGCTTCTCTCCATGCTTCATGCAGTGCGTTTCCTGGGTACTCTTCTaGGTATTCTGGGCTATCTGTTTAAGGTTTTCCACCATGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFSPCFMQCVSWVLF*VFWAICLRFSTMLA Trigger: AGCCAACATGGTGGAAAACCTTAAACAGATAGCCCAGAATACCAAGAAGAGTACCCAGGAAACGCACTGCATGAAGCATGGAGAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 72 bp | GAGGTCCAGCAAAAACACACTCCGAGAAGGTGTAAATaGGGGAGCCATGGTCAGTTATGTTGTAGAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: EVQQKHTPRRCK*GSHGQLCCRRR Trigger: TCTCCTTCTACAACATAACTGACCATGGCTCCCTCATTTACACCTTCTCGGAGTGTGTTTTTGCTGGACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 72 bp | CCTCACAGAATAGGTGAAGCTTCTCTCCATGCTTCATaGAGTGCGTTTCCTGGGTACTCTTCTTGGTATTCT | + |
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Preference number: 6 (lower is better) Translates to: PHRIGEASLHAS*SAFPGYSSWYS Trigger: AGAATACCAAGAAGAGTACCCAGGAAACGCACTGCATGAAGCATGGAGAGAAGCTTCACCTATTCTGTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS GCA 72 bp | TTCTGGGTGTCAATGTTCCTCTTCCAGTCTGTTCTTTaGATCGTGAGATCCATTTCCATCTTCTCGGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FWVSMFLFQSVL*IVRSISIFSAN Trigger: GTTGGCCGAGAAGATGGAAATGGATCTCACGATGCAAAGAACAGACTGGAAGAGGAACATTGACACCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 72 bp | CCATGCTTCATGCAGTGCGTTTCCTGGGTACTCTTCTaGGTATTCTGGGCTATCTGTTTAAGGTTTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PCFMQCVSWVLF*VFWAICLRFST Trigger: GGTGGAAAACCTTAAACAGATAGCCCAGAATACCAAGAAGAGTACCCAGGAAACGCACTGCATGAAGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 72 bp | CTTCTGGGTGTCAATGTTCCTCTTCCAGTCTGTTCTTaGCATCGTGAGATCCATTTCCATCTTCTCGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LLGVNVPLPVCS*HREIHFHLLGQ Trigger: TTGGCCGAGAAGATGGAAATGGATCTCACGATGCAAAGAACAGACTGGAAGAGGAACATTGACACCCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS TCA 72 bp | TGTCAATGTTCCTCTTCCAGTCTGTTCTTTGCATCGTaGGATCCATTTCCATCTTCTCGGCCAACTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: CQCSSSSLFFAS*DPFPSSRPTLS Trigger: GGAAAGAGTTGGCCGAGAAGATGGAAATGGATCTCACGATGCAAAGAACAGACTGGAAGAGGAACATTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 72 bp | TTTCTCAGTTTTTCTAAAGCCACGTGGATCTTCTCCTaGTATACCTTAGCAGCCTCTTCAATAGGGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: FLSFSKATWIFS*YTLAASSIGTL Trigger: CAGGGTCCCTATTGAAGAGGCTGCTAAGGTATACCAGGAGAAGATCCACGTGGCTTTAGAAAAACTGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 72 bp | GTATTCTGGGCTATCTGTTTAAGGTTTTCCACCATGTaGGCTATATGTCTATTGGGCCTGAGGTTTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VFWAICLRFSTM*AICLLGLRFRS Trigger: GCTCCGAAACCTCAGGCCCAATAGACATATAGCCAACATGGTGGAAAACCTTAAACAGATAGCCCAGAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CAA 90 bp | CTCTTCTTGGTATTCTGGGCTATCTGTTTAAGGTTTTCCACCATGTaGGCTATATGTCTATTGGGCCTGAGGTTTCGGAGCAGAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: LFLVFWAICLRFSTM*AICLLGLRFRSRNC Trigger: ACAGTTTCTGCTCCGAAACCTCAGGCCCAATAGACATATAGCCAACATGGTGGAAAACCTTAAACAGATAGCCCAGAATACCAAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 72 bp | TTCCCAACTTCAAAAATGCATTCCTTGCAAAAGCAATaGCCACATTCGATACTCATAGGCTCCACCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: FPTSKMHSLQKQ*PHSILIGSTMG Trigger: TCCCATGGTGGAGCCTATGAGTATCGAATGTGGCCATTGCTTTTGCAAGGAATGCATTTTTGAAGTTGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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| CDS CCA 72 bp | AACTCTTTCCCCTTTCTCAGTTTTTCTAAAGCCACGTaGATCTTCTCCTGGTATACCTTAGCAGCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NSFPFLSFSKAT*IFSWYTLAASS Trigger: TGAAGAGGCTGCTAAGGTATACCAGGAGAAGATCCACGTGGCTTTAGAAAAACTGAGAAAGGGGAAAGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033264.12 ENSMUST00000106913.3 |
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