Pregenerated sensors for TRIM17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036964Ensembl transcript IDs: ENSMUST00000047697.12, ENSMUST00000075141.7
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCACGAACCGGTCCTTGCTGTAGGGGGCGCTGCCCTCGGGCGGTaGGCTCAAGTACCGCCTCTGGCGACTCTCGTAGAGGAGGAGATA | + |
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Preference number: 1 (lower is better) Translates to: GHEPVLAVGGAALGR*AQVPPLATLVEEEI Trigger: TATCTCCTCCTCTACGAGAGTCGCCAGAGGCGGTACTTGAGCCCACCGCCCGAGGGCAGCGCCCCCTACAGCAAGGACCGGTTCGTGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR GCA 90 bp | TGCCCCAGGGAAGCCTGGGTAGGTGGCCACGGTGGTGAAGCACCCTaGCTTCTGGGGAACTGTGGCACACCCAGTGTCTGCCCGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: CPREAWVGGHGGEAP*LLGNCGTPSVCPAS Trigger: TGAAGCCGGGCAGACACTGGGTGTGCCACAGTTCCCCAGAAGGCAGGGTGCTTCACCACCGTGGCCACCTACCCAGGCTTCCCTGGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR GCA 90 bp | GGTGAAGCACCCTGCCTTCTGGGGAACTGTGGCACACCCAGTGTCTaGCCGGCTTCAAGCCTCTATCCCTTCACCCACATGGTCACTGTG | + |
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Preference number: 1 (lower is better) Translates to: GEAPCLLGNCGTPSV*PASSLYPFTHMVTV Trigger: CACAGTGACCATGTGGGTGAAGGGATAGAGGCTTGAAGCCGGGCAGACACTGGGTGTGCCACAGTTCCCCAGAAGGCAGGGTGCTTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR CCA 90 bp | AGCCTCTATCCCTTCACCCACATGGTCACTGTGGAGATGACCATCTaGCCTGACTTGGGAGCCCCCAAGCAGAAGAATGGCAGCAGCGGC | + |
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Preference number: 1 (lower is better) Translates to: SLYPFTHMVTVEMTI*PDLGAPKQKNGSSG Trigger: GCCGCTGCTGCCATTCTTCTGCTTGGGGGCTCCCAAGTCAGGCCAGATGGTCATCTCCACAGTGACCATGTGGGTGAAGGGATAGAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR TCA 90 bp | CGGCTTCAAGCCTCTATCCCTTCACCCACATGGTCACTGTGGAGATaGCCATCTGGCCTGACTTGGGAGCCCCCAAGCAGAAGAATGGCA | + |
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Preference number: 1 (lower is better) Translates to: RLQASIPSPTWSLWR*PSGLTWEPPSRRMA Trigger: TGCCATTCTTCTGCTTGGGGGCTCCCAAGTCAGGCCAGATGGTCATCTCCACAGTGACCATGTGGGTGAAGGGATAGAGGCTTGAAGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR TCA 90 bp | CCTGTTGTTGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTGGTTaGCTGACCCCAATGGGAGACAAGATACATGTCACACCATGGGCA | + |
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Preference number: 1 (lower is better) Translates to: PVVAQSLQCHPHVCG*LTPMGDKIHVTPWA Trigger: TGCCCATGGTGTGACATGTATCTTGTCTCCCATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR GCA 90 bp | CCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGCACCTGTTGTTaGTCAGAGCCTCCAGTGCCACCCTCATGTCTGTGGTTGACTGAC | + |
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Preference number: 1 (lower is better) Translates to: PLHFYSVFIARSTCC*SEPPVPPSCLWLTD Trigger: GTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACAACAGGTGCTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR TCA 90 bp | TTGTTGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTGGTTGACTaGCCCCAATGGGAGACAAGATACATGTCACACCATGGGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: LLLRASSATLMSVVD*PQWETRYMSHHGHR Trigger: TCTGTGCCCATGGTGTGACATGTATCTTGTCTCCCATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR CCA 90 bp | AGCACCTGTTGTTGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTaGTTGACTGACCCCAATGGGAGACAAGATACATGTCACACCATG | + |
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Preference number: 1 (lower is better) Translates to: STCCCSEPPVPPSCL*LTDPNGRQDTCHTM Trigger: CATGGTGTGACATGTATCTTGTCTCCCATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACAACAGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR GCA 90 bp | ATCCTGGGAGCAGGGGCTGTGAGGATAGACACAAGCATGCACAAGTaGGTAACTCCAGGGCTCAGAAAAGGATGCAGAGTACTACTGATG | + |
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Preference number: 1 (lower is better) Translates to: ILGAGAVRIDTSMHK*VTPGLRKGCRVLLM Trigger: CATCAGTAGTACTCTGCATCCTTTTCTGAGCCCTGGAGTTACGCACTTGTGCATGCTTGTGTCTATCCTCACAGCCCCTGCTCCCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR GCA 90 bp | CTGCCACTGTGCAAGAAACTGTCCGTGCTTCAAATGCTGACTGAATaGTGTCCGGAATGGACAAACTGGGATGCAGGGAACTCAACTGCC | + |
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Preference number: 1 (lower is better) Translates to: LPLCKKLSVLQMLTE*CPEWTNWDAGNSTA Trigger: GGCAGTTGAGTTCCCTGCATCCCAGTTTGTCCATTCCGGACAGCATTCAGTCAGCATTTGAAGCACGGACAGTTTCTTGCACAGTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR CCA 90 bp | AAAGGATGCAGAGTACTACTGATGGGCAGGATGACCTCAAGGACATaGAAAACCCTGAGAGTGGTGACCAAGGGAGTCGGTGGTTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: KGCRVLLMGRMTSRT*KTLRVVTKGVGGFP Trigger: AGGGAAACCACCGACTCCCTTGGTCACCACTCTCAGGGTTTTCCATGTCCTTGAGGTCATCCTGCCCATCAGTAGTACTCTGCATCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR CCA 90 bp | GGCAGGAAATTAGATGGGACATCAGACAGAGCAGGAGGGGGATGCTaGGATAGAGACAGGTGGAAGATTGACCCCCGAATGCTGATATGT | + |
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Preference number: 1 (lower is better) Translates to: GRKLDGTSDRAGGGC*DRDRWKIDPRMLIC Trigger: ACATATCAGCATTCGGGGGTCAATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTCTGATGTCCCATCTAATTTCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR GCA 90 bp | TGTCACACCATGGGCACAGAAGGGTCACAGTGGAAACATGTGCTATaGCAGTTCACCATCTCACTTGAGTCCTGGCATGCTAGTAACTTT | + |
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Preference number: 1 (lower is better) Translates to: CHTMGTEGSQWKHVL*QFTISLESWHASNF Trigger: AAAGTTACTAGCATGCCAGGACTCAAGTGAGATGGTGAACTGGCATAGCACATGTTTCCACTGTGACCCTTCTGTGCCCATGGTGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR GCA 90 bp | ATACATGTCACACCATGGGCACAGAAGGGTCACAGTGGAAACATGTaGTATGCCAGTTCACCATCTCACTTGAGTCCTGGCATGCTAGTA | + |
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Preference number: 1 (lower is better) Translates to: IHVTPWAQKGHSGNM*YASSPSHLSPGMLV Trigger: TACTAGCATGCCAGGACTCAAGTGAGATGGTGAACTGGCATAGCACATGTTTCCACTGTGACCCTTCTGTGCCCATGGTGTGACATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR CCA 90 bp | TCCGTGCTTCAAATGCTGACTGAATGCTGTCCGGAATGGACAAACTaGGATGCAGGGAACTCAACTGCCAAGCTTTGCAAGAACAAGATA | + |
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Preference number: 1 (lower is better) Translates to: SVLQMLTECCPEWTN*DAGNSTAKLCKNKI Trigger: TATCTTGTTCTTGCAAAGCTTGGCAGTTGAGTTCCCTGCATCCCAGTTTGTCCATTCCGGACAGCATTCAGTCAGCATTTGAAGCACGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR CCA 90 bp | CGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATaGAGTTTGTTTCAAATGTGGCCACTGCCACTGTGCAAGAAACTG | + |
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Preference number: 1 (lower is better) Translates to: RFSTSKKVEHQRISL*SLFQMWPLPLCKKL Trigger: CAGTTTCTTGCACAGTGGCAGTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR TCA 90 bp | CAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGAGGTGGCCACGGTGGTaGAGCACCCTGCCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QGSRWFPSALLLCVHSPQRWPRW*STLPSG Trigger: CCCAGAAGGCAGGGTGCTTCACCACCGTGGCCACCT...CTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGCTGCCCCAGGGAAGCCTaGGTAGGTGGCCACGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: KGVGGFPLHFYSVFIARSCPREA*VGGHGG Trigger: ACCACCGTGGCCACCTACCCAGGCTTCCCTGGGGCA...GCTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR TCA 90 bp | AATGCTGTCCGGAATGGACAAACTGGGATGCAGGGAACTCAACTGCCAAGCTTTAGGTGGCCACGGTGGTaGAGCACCCTGCCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: NAVRNGQTGMQGTQLPSFRWPRW*STLPSG Trigger: CCCAGAAGGCAGGGTGCTTCACCACCGTGGCCACCT...AAAGCTTGGCAGTTGAGTTCCCTGCATCCCAGTTTGTCCATTCCGGACAGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGCGTGGAGATGACCATCTaGCCTGACTTGGGAGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: KGVGGFPLHFYSVFIARSVEMTI*PDLGAP Trigger: GGGGGCTCCCAAGTCAGGCCAGATGGTCATCTCCAC...GCTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR-3UTR CCA 90 bp | CATCAGACAGAGCAGGAGGGGGATGCTGGGATAGAGACAGGTGGAAGATTGACCAGGAAGATCCCCATGTaGCTGGGAGGCTCTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: HQTEQEGDAGIETGGRLTRKIPM*LGGSVR Trigger: TCTCACAGAGCCTCCCAGCCACATGGGGATCTTCCT...GGTCAATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTCTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR CAA 90 bp | ACCTGTTGTTGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTGGTaGACTGACCCCAATGGGAGACAAGATACATGTCACACCATGGGC | + |
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Preference number: 2 (lower is better) Translates to: TCCCSEPPVPPSCLW*TDPNGRQDTCHTMG Trigger: GCCCATGGTGTGACATGTATCTTGTCTCCCATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACAACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGCTGCACAGAAAAGTCTGTCAGTTATACGGTGCCAGAGGGCTGAAGACTGGTGGTGAAGCACCCTaGCTTCTGGGGAACTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: FLLHRKVCQLYGARGLKTGGEAP*LLGNCG Trigger: GCCACAGTTCCCCAGAAGGCAGGGTGCTTCACCACC...AGTCTTCAGCCCTCTGGCACCGTATAACTGACAGACTTTTCTGTGCAGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR CAA 90 bp | TTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGCACCTGTaGTTGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTGGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: FPSALLLCVHSPQHL*LLRASSATLMSVVD Trigger: GTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACAACAGGTGCTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTTATCCTGGGAGCAGGGGCTGTGAGGATAGACACAAGCATGCACAAGTGAACAGGAATGGGAAGTaGGAGGGGTTCTTGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QSYPGSRGCEDRHKHAQVNRNGK*EGFLGK Trigger: CTTCCCCAAGAACCCCTCCCACTTCCCATTCCTGTT...CACTTGTGCATGCTTGTGTCTATCCTCACAGCCCCTGCTCCCAGGATAACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR TCA 90 bp | CATCAGACAGAGCAGGAGGGGGATGCTGGGATAGAGACAGGTGGAAGATTGACCTACAGCAGCAAAACCTaGGGACCAGGTTATCAACCA | + |
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Preference number: 2 (lower is better) Translates to: HQTEQEGDAGIETGGRLTYSSKT*GPGYQP Trigger: TGGTTGATAACCTGGTCCTCAGGTTTTGCTGCTGTA...GGTCAATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTCTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR CCA 90 bp | GCACAGAAGGGTCACAGTGGAAACATGTGCTATGCCAGTTCACCATCTCACTTGCCAGGGAAGGCAGCCTaGGAAAAGCTGTGTAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: AQKGHSGNMCYASSPSHLPGKAA*EKLCKW Trigger: CCACTTACACAGCTTTTCCCAGGCTGCCTTCCCTGG...CAAGTGAGATGGTGAACTGGCATAGCACATGTTTCCACTGTGACCCTTCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR-3UTR CCA 90 bp | GGGACATCAGACAGAGCAGGAGGGGGATGCTGGGATAGAGACAGGTGGAAGATTATACATGTCACACCATaGGCACAGAAGGGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: GTSDRAGGGCWDRDRWKIIHVTP*AQKGHS Trigger: ACTGTGACCCTTCTGTGCCCATGGTGTGACATGTAT...AATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTCTGATGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR GCA 90 bp | TATGCCAGTTCACCATCTCACTTGAGTCCTGGCATGCTAGTAACTTTTAACAGGGACTCACGTTGTCCCTaGACACCCCCAAGGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: YASSPSHLSPGMLVTFNRDSRCP*TPPRPR Trigger: TCTGGGCCTTGGGGGTGTGCAGGGACAACGTGAGTC...CCTGTTAAAAGTTACTAGCATGCCAGGACTCAAGTGAGATGGTGAACTGGCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR-3UTR TCA 90 bp | CTAAATATATCTGAGTCTCAGAGTTATCCTGGGAGCAGGGGCTGTGAGGATAGATGGTCACTGTGGAGATaGCCATCTGGCCTGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: LNISESQSYPGSRGCEDRWSLWR*PSGLTW Trigger: CCAAGTCAGGCCAGATGGTCATCTCCACAGTGACCA...TCTATCCTCACAGCCCCTGCTCCCAGGATAACTCTGAGACTCAGATATATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR-3UTR CCA 90 bp | GACCAGGTTATCAACCATGTGGCAGACCTTAGAGTAACGGGAAGATTAGCTTATAAGCACCCTGCCTTCTaGGGAACTGTGGCACACCCA | + |
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Preference number: 2 (lower is better) Translates to: DQVINHVADLRVTGRLAYKHPAF*GTVAHP Trigger: TGGGTGTGCCACAGTTCCCCAGAAGGCAGGGTGCTT...ATAAGCTAATCTTCCCGTTACTCTAAGGTCTGCCACATGGTTGATAACCTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAATATATCTGAGTCTCAGAGTTATCCTGGGAGCAGGGGCTGTGAGGATAGAAACAGGAATGGGAAGTaGGAGGGGTTCTTGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LNISESQSYPGSRGCEDRNRNGK*EGFLGK Trigger: CTTCCCCAAGAACCCCTCCCACTTCCCATTCCTGTT...TCTATCCTCACAGCCCCTGCTCCCAGGATAACTCTGAGACTCAGATATATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCTGCACAGAAAAGTCTGTCAGTTATACGGTGCCAGAGGGCTGAAGACTATACATGTCACACCATaGGCACAGAAGGGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: FLLHRKVCQLYGARGLKTIHVTP*AQKGHS Trigger: ACTGTGACCCTTCTGTGCCCATGGTGTGACATGTAT...AGTCTTCAGCCCTCTGGCACCGTATAACTGACAGACTTTTCTGTGCAGCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAATATATCTGAGTCTCAGAGTTATCCTGGGAGCAGGGGCTGTGAGGATAGAAGTGGGAGGGGTTCTTaGGGAAGGGTGTTAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LNISESQSYPGSRGCEDRSGRGS*GRVLEK Trigger: CTTTTCTAACACCCTTCCCCAAGAACCCCTCCCACT...TCTATCCTCACAGCCCCTGCTCCCAGGATAACTCTGAGACTCAGATATATTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGCTGCACAGAAAAGTCTGTCAGTTATACGGTGCCAGAGGGCTGAAGACTTCTCACTTGAGCATTTaGATCTTGACTGTATTTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLLHRKVCQLYGARGLKTSHLSI*ILTVFQ Trigger: CTGAAATACAGTCAAGATTCAAATGCTCAAGTGAGA...AGTCTTCAGCCCTCTGGCACCGTATAACTGACAGACTTTTCTGTGCAGCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR CAA 90 bp | TCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTaGTTTCAAATGTGGCCACTGCCACTGTGCAAGAAACTGTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: STSKKVEHQRISLWS*FQMWPLPLCKKLSV Trigger: CACGGACAGTTTCTTGCACAGTGGCAGTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR CAA 90 bp | TCTTGTTCACTGTGTAAAAGCATTCACCTGTCAATAAAAGGCTTATaGGCCAATGAGCTGAGGCAGGAAATTAGATGGGACATCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: SCSLCKSIHLSIKGL*ANELRQEIRWDIRQ Trigger: CTGTCTGATGTCCCATCTAATTTCCTGCCTCAGCTCATTGGCCAATAAGCCTTTTATTGACAGGTGAATGCTTTTACACAGTGAACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR-3UTR GCA 90 bp | CGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTTGTCGGTGGTTTCCCTCTaGACTTTTACTCTGTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: RFSTSKKVEHQRISLWSLSVVSL*TFTLCS Trigger: TGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGA...CAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| 3UTR GCA 72 bp | GCCCCACAGCGCACGGGTAGGCCACGAACCGGTCCTTaGTGTAGGGGGCGCTGCCCTCGGGCGGTGGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: APQRTGRPRTGP*CRGRCPRAVGS Trigger: TGAGCCCACCGCCCGAGGGCAGCGCCCCCTACAGCAAGGACCGGTTCGTGGCCTACCCGTGCGCTGTGGGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR CCA 72 bp | CCGGTCCTTGCTGTAGGGGGCGCTGCCCTCGGGCGGTaGGCTCAAGTACCGCCTCTGGCGACTCTCGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: PVLAVGGAALGR*AQVPPLATLVE Trigger: CTCTACGAGAGTCGCCAGAGGCGGTACTTGAGCCCACCGCCCGAGGGCAGCGCCCCCTACAGCAAGGACCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR TCA 72 bp | CCCTGCACACCCCCAAGGCCCAGAGTGCATCCCCGGTaGGATTCATGCCCACTTCCCAGTAGTGCCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: PCTPPRPRVHPR*DSCPLPSSAFQ Trigger: CTGGAAGGCACTACTGGGAAGTGGGCATGAATCTCACCGGGGATGCACTCTGGGCCTTGGGGGTGTGCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR TCA 72 bp | CTGGCGACTCTCGTAGAGGAGGAGATAGGGGTATGCTaGGCTGGGGTCCGGCATCACATCCTCTTGGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: LATLVEEEIGVC*AGVRHHILLEA Trigger: AGCTTCCAAGAGGATGTGATGCCGGACCCCAGCTCAGCATACCCCTATCTCCTCCTCTACGAGAGTCGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR TCA 72 bp | CACCCACATGGTCACTGTGGAGATGACCATCTGGCCTaGCTTGGGAGCCCCCAAGCAGAAGAATGGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: HPHGHCGDDHLA*LGSPQAEEWQQ Trigger: CTGCTGCCATTCTTCTGCTTGGGGGCTCCCAAGTCAGGCCAGATGGTCATCTCCACAGTGACCATGTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR TCA 72 bp | GCCTCTATCCCTTCACCCACATGGTCACTGTGGAGATaGCCATCTGGCCTGACTTGGGAGCCCCCAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: ASIPSPTWSLWR*PSGLTWEPPSR Trigger: TCTGCTTGGGGGCTCCCAAGTCAGGCCAGATGGTCATCTCCACAGTGACCATGTGGGTGAAGGGATAGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
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| 3UTR CCA 72 bp | CCCTTCACCCACATGGTCACTGTGGAGATGACCATCTaGCCTGACTTGGGAGCCCCCAAGCAGAAGAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: PFTHMVTVEMTI*PDLGAPKQKNG Trigger: GCCATTCTTCTGCTTGGGGGCTCCCAAGTCAGGCCAGATGGTCATCTCCACAGTGACCATGTGGGTGAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
||
| 3UTR CCA 72 bp | CCCCTTGGACAGCTGCACTACCCAGAAGCCGTTTTCTaGGGACTTAAGCACTCTGTCCTTCCGACTCACGTT | + |
|
Preference number: 3 (lower is better) Translates to: PLGQLHYPEAVF*GLKHSVLPTHV Trigger: AACGTGAGTCGGAAGGACAGAGTGCTTAAGTCCCCAGAAAACGGCTTCTGGGTAGTGCAGCTGTCCAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
||
| 3UTR TCA 72 bp | GCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTGGTTaGCTGACCCCAATGGGAGACAAGATACATGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: AQSLQCHPHVCG*LTPMGDKIHVT Trigger: TGTGACATGTATCTTGTCTCCCATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | GACAGAGCAGGAGGGGGATGCTGGGATAGAGACAGGTaGAAGATTGACCCCCGAATGCTGATATGTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DRAGGGCWDRDR*KIDPRMLICTA Trigger: TGCTGTACATATCAGCATTCGGGGGTCAATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | TTAGATGGGACATCAGACAGAGCAGGAGGGGGATGCTaGGATAGAGACAGGTGGAAGATTGACCCCCGAATG | + |
|
Preference number: 3 (lower is better) Translates to: LDGTSDRAGGGC*DRDRWKIDPRM Trigger: CATTCGGGGGTCAATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTCTGATGTCCCATCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR-3UTR CAA 90 bp | TATGTACAGCAGCAAAACCTGAGGACCAGGTTATCAACCATGTGGCAGACCTTACCGCAGCACCTGTTGTaGCTCAGAGCCTCCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: YVQQQNLRTRLSTMWQTLPQHLL*LRASSA Trigger: GGCACTGGAGGCTCTGAGCAACAACAGGTGCTGCGG...TAAGGTCTGCCACATGGTTGATAACCTGGTCCTCAGGTTTTGCTGCTGTACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGCATCAAAGAATCTCCCTATGGAGTTTGTTTCAAATGTGGCCACTGCCACTGCCGCAGCACCTGTTGTaGCTCAGAGCCTCCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: EHQRISLWSLFQMWPLPLPQHLL*LRASSA Trigger: GGCACTGGAGGCTCTGAGCAACAACAGGTGCTGCGG...CAGTGGCAGTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR TCA 72 bp | AGAGCCTCCAGTGCCACCCTCATGTCTGTGGTTGACTaGCCCCAATGGGAGACAAGATACATGTCACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: RASSATLMSVVD*PQWETRYMSHH Trigger: ATGGTGTGACATGTATCTTGTCTCCCATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR GCA 72 bp | ACACCATGGGCACAGAAGGGTCACAGTGGAAACATGTaGTATGCCAGTTCACCATCTCACTTGAGTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TPWAQKGHSGNM*YASSPSHLSPG Trigger: GCCAGGACTCAAGTGAGATGGTGAACTGGCATAGCACATGTTTCCACTGTGACCCTTCTGTGCCCATGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR GCA 72 bp | AAATTAGATGGGACATCAGACAGAGCAGGAGGGGGATaGTGGGATAGAGACAGGTGGAAGATTGACCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: KLDGTSDRAGGG*WDRDRWKIDPR Trigger: TCGGGGGTCAATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTCTGATGTCCCATCTAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | TGTTGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTaGTTGACTGACCCCAATGGGAGACAAGATACATGT | + |
|
Preference number: 3 (lower is better) Translates to: CCSEPPVPPSCL*LTDPNGRQDTC Trigger: ACATGTATCTTGTCTCCCATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | AGAGTACTACTGATGGGCAGGATGACCTCAAGGACATaGAAAACCCTGAGAGTGGTGACCAAGGGAGTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: RVLLMGRMTSRT*KTLRVVTKGVG Trigger: ACCGACTCCCTTGGTCACCACTCTCAGGGTTTTCCATGTCCTTGAGGTCATCCTGCCCATCAGTAGTACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR GCA 72 bp | ATGGGCACAGAAGGGTCACAGTGGAAACATGTGCTATaGCAGTTCACCATCTCACTTGAGTCCTGGCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: MGTEGSQWKHVL*QFTISLESWHA Trigger: AGCATGCCAGGACTCAAGTGAGATGGTGAACTGGCATAGCACATGTTTCCACTGTGACCCTTCTGTGCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR GCA 72 bp | ATGCACAAGTGCGTAACTCCAGGGCTCAGAAAAGGATaGAGAGTACTACTGATGGGCAGGATGACCTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MHKCVTPGLRKG*RVLLMGRMTSR Trigger: CCTTGAGGTCATCCTGCCCATCAGTAGTACTCTGCATCCTTTTCTGAGCCCTGGAGTTACGCACTTGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR TCA 72 bp | ACTGTGCAAGAAACTGTCCGTGCTTCAAATGCTGACTaGATGCTGTCCGGAATGGACAAACTGGGATGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TVQETVRASNAD*MLSGMDKLGCR Trigger: CCTGCATCCCAGTTTGTCCATTCCGGACAGCATTCAGTCAGCATTTGAAGCACGGACAGTTTCTTGCACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR GCA 72 bp | TGCAAGAAACTGTCCGTGCTTCAAATGCTGACTGAATaGTGTCCGGAATGGACAAACTGGGATGCAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CKKLSVLQMLTE*CPEWTNWDAGN Trigger: GTTCCCTGCATCCCAGTTTGTCCATTCCGGACAGCATTCAGTCAGCATTTGAAGCACGGACAGTTTCTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | CTGACCCCAATGGGAGACAAGATACATGTCACACCATaGGCACAGAAGGGTCACAGTGGAAACATGTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LTPMGDKIHVTP*AQKGHSGNMCY Trigger: ATAGCACATGTTTCCACTGTGACCCTTCTGTGCCCATGGTGTGACATGTATCTTGTCTCCCATTGGGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | ATGGAAAACCCTGAGAGTGGTGACCAAGGGAGTCGGTaGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: MENPESGDQGSR*FPSALLLCVHS Trigger: GCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTGGTCACCACTCTCAGGGTTTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | CAAATGCTGACTGAATGCTGTCCGGAATGGACAAACTaGGATGCAGGGAACTCAACTGCCAAGCTTTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QMLTECCPEWTN*DAGNSTAKLCK Trigger: CTTGCAAAGCTTGGCAGTTGAGTTCCCTGCATCCCAGTTTGTCCATTCCGGACAGCATTCAGTCAGCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACAAGATAGCTAAGTCCTTCATCATTCCTGCTGCACAGAAAAGTCTGTCAAGCCCGCAGCACCTGTaGTTGCTCAGAGCCTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KNKIAKSFIIPAAQKSLSSPQHL*LLRASS Trigger: ACTGGAGGCTCTGAGCAACAACAGGTGCTGCGGGCT...TGACAGACTTTTCTGTGCAGCAGGAATGATGAAGGACTTAGCTATCTTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | GATACATGTCACACCATGGGCACAGAAGGGTCACAGTaGAAACATGTGCTATGCCAGTTCACCATCTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: DTCHTMGTEGSQ*KHVLCQFTISL Trigger: AAGTGAGATGGTGAACTGGCATAGCACATGTTTCCACTGTGACCCTTCTGTGCCCATGGTGTGACATGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR GCA 72 bp | GAATCTCCCTATGGAGTTTGTTTCAAATGTGGCCACTaGCACTGTGCAAGAAACTGTCCGTGCTTCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ESPYGVCFKCGH*HCARNCPCFKC Trigger: GCATTTGAAGCACGGACAGTTTCTTGCACAGTGGCAGTGGCCACATTTGAAACAAACTCCATAGGGAGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR GCA 72 bp | CTATGGAGTTTGTTTCAAATGTGGCCACTGCCACTGTaGAAGAAACTGTCCGTGCTTCAAATGCTGACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LWSLFQMWPLPL*KKLSVLQMLTE Trigger: TTCAGTCAGCATTTGAAGCACGGACAGTTTCTTGCACAGTGGCAGTGGCCACATTTGAAACAAACTCCATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | CATCAAAGAATCTCCCTATGGAGTTTGTTTCAAATGTaGCCACTGCCACTGTGCAAGAAACTGTCCGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HQRISLWSLFQM*PLPLCKKLSVL Trigger: AAGCACGGACAGTTTCTTGCACAGTGGCAGTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTTGTTTCAAATGTGGCCACAAGTGGGAGGGGTTCTaGGGGAAGGGTGTTAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RKLSIKESPYGVCFKCGHKWEGF*GKGVRK Trigger: TTTTCTAACACCCTTCCCCAAGAACCCCTCCCACTT...GTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR TCA 72 bp | ACAGAAAAGTCTGTCAGTTATACGGTGCCAGAGGGCTaGAGACTGAAGTTCCACCATTATACAGGAATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TEKSVSYTVPEG*RLKFHHYTGIL Trigger: CAGAATTCCTGTATAATGGTGGAACTTCAGTCTTCAGCCCTCTGGCACCGTATAACTGACAGACTTTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CCA 72 bp | ACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATaGAGTTTGTTTCAAATGTGGCCACTGCCACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TSKKVEHQRISL*SLFQMWPLPLC Trigger: GCACAGTGGCAGTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTTGAAGTGGGAGGGGTTCTaGGGGAAGGGTGTTAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RFSTSKKVEHQRISLWSLKWEGF*GKGVRK Trigger: TTTTCTAACACCCTTCCCCAAGAACCCCTCCCACTT...CAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR TCA 72 bp | TGGCAACAGGACCCGTTTTTCTACTTCAAAGAAAGTTaGGCATCAAAGAATCTCCCTATGGAGTTTGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: WQQDPFFYFKES*ASKNLPMEFVS Trigger: TGAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACGGGTCCTGTTGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | CATCAGACAGAGCAGGAGGGGGATGCTGGGATAGAGACAGGTGGAAGATTGACCTGGAGGGGCTCCTGCTaGCTCCGCTCCTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQTEQEGDAGIETGGRLTWRGSC*LRSSSC Trigger: GCAGCTGGAGGAGCGGAGCCAGCAGGAGCCCCTCCA...GGTCAATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTCTGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGCACACCCCCAAGGCCCAGAGTGCATCCCCGGTGAGATTCATGCCCACGAGCTTATACTCCCTTaGAGCCTCATCCAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPAHPQGPECIPGEIHAHELILP*SLIQRQ Trigger: CTGCCTCTGGATGAGGCTGCAAGGGAGTATAAGCTC...GTGGGCATGAATCTCACCGGGGATGCACTCTGGGCCTTGGGGGTGTGCAGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGCCACAGGTCTCGCTTCTaGAGCCCAGGGTGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KGVGGFPLHFYSVFIARSHRSRF*SPGCWR Trigger: CCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTG...GCTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | ATGTGGCTGGGAGGCTCTGTGAGAGTGACTAGAGTGGAATTGGGTAACAGGGACAGAGGCAGCACCCTGTaGATCCGGTGCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MWLGGSVRVTRVELGNRDRGSTL*IRCSWA Trigger: GGCCCAGGAGCACCGGATGCACAGGGTGCTGCCTCT...GTCCCTGTTACCCAATTCCACTCTAGTCACTCTCACAGAGCCTCCCAGCCACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGCAGAGGCAGCACCCTGTaGATCCGGTGCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGVGGFPLHFYSVFIARSRGSTL*IRCSWA Trigger: GGCCCAGGAGCACCGGATGCACAGGGTGCTGCCTCT...GCTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | CCTTCATCATTCCTGCTGCACAGAAAAGTCTGTCAGTTATACGGTGCCAGAGGGATCTGGAGGGGCTCCTaGTGGCTCCGCTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSFLLHRKVCQLYGARGIWRGS*WLRSSS Trigger: GCTGGAGGAGCGGAGCCAGCAGGAGCCCCTCCAGAT...CCCTCTGGCACCGTATAACTGACAGACTTTTCTGTGCAGCAGGAATGATGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | AGACACAAGCATGCACAAGTGCGTAACTCCAGGGCTCAGAAAAGGATGCAGAGTATCTGGAGGGGCTCCTaGTGGCTCCGCTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHKHAQVRNSRAQKRMQSIWRGS*WLRSSS Trigger: GCTGGAGGAGCGGAGCCAGCAGGAGCCCCTCCAGAT...ACTCTGCATCCTTTTCTGAGCCCTGGAGTTACGCACTTGTGCATGCTTGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGACATCCTGCAGCATCTaGAGGGGCTCCTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSRWFPSALLLCVHSPQTSCSI*RGSCWL Trigger: GAGCCAGCAGGAGCCCCTCCAGATGCTGCAGGATGT...CTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | GTACAGCAGCAAAACCTGAGGACCAGGTTATCAACCATGTGGCAGACCTTAGAGGCTCCTGGGCCTCCCTaGAGACCACACAAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQQQNLRTRLSTMWQTLEAPGPP*RPHKWG Trigger: GCCCCATTTGTGTGGTCTGCAGGGAGGCCCAGGAGC...CTCTAAGGTCTGCCACATGGTTGATAACCTGGTCCTCAGGTTTTGCTGCTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTATCCTGGGAGCAGGGGCTGTGAGGATAGACACAAGCATGCACAAGTGTGGTCACTGTGGAGATaGCCATCTGGCCTGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSYPGSRGCEDRHKHAQVWSLWR*PSGLTW Trigger: CCAAGTCAGGCCAGATGGTCATCTCCACAGTGACCA...CACTTGTGCATGCTTGTGTCTATCCTCACAGCCCCTGCTCCCAGGATAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | CTAAATATATCTGAGTCTCAGAGTTATCCTGGGAGCAGGGGCTGTGAGGATAGAACCCTGTGCATCCGGTaGTCCTGGGCCTCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNISESQSYPGSRGCEDRTLCIR*SWASLQ Trigger: CTGCAGGGAGGCCCAGGAGCACCGGATGCACAGGGT...TCTATCCTCACAGCCCCTGCTCCCAGGATAACTCTGAGACTCAGATATATTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | ATGGTCACTGTGGAGATGACCATCTGGCCTGACTTGGGAGCCCCCAAGCAGAAGTTCTCCCAGCTCATCTaGATGCACTCTCTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MVTVEMTIWPDLGAPKQKFSQLI*MHSLQK Trigger: CTTCTGCAGAGAGTGCATCCAGATGAGCTGGGAGAA...CTTCTGCTTGGGGGCTCCCAAGTCAGGCCAGATGGTCATCTCCACAGTGACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
||
| CDS-3UTR CCA 90 bp | ACCCTGAGAGTGGTGACCAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGGTTCTTGGTGTGCTTaGCACAGGTCTCGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRVVTKGVGGFPLHFYSGSWCA*HRSRFC Trigger: GCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACC...AGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTGGTCACCACTCTCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | GACCAGGTTATCAACCATGTGGCAGACCTTAGAGTAACGGGAAGATTAGCTTATTGGAGGGGCTCCTGCTaGCTCCGCTCCTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DQVINHVADLRVTGRLAYWRGSC*LRSSSC Trigger: GCAGCTGGAGGAGCGGAGCCAGCAGGAGCCCCTCCA...ATAAGCTAATCTTCCCGTTACTCTAAGGTCTGCCACATGGTTGATAACCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | ACCCTGAGAGTGGTGACCAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTAGGAAGATCCCCATGTaGCTGGGAGGCTCTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLRVVTKGVGGFPLHFYSRKIPM*LGGSVR Trigger: TCTCACAGAGCCTCCCAGCCACATGGGGATCTTCCT...AGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTGGTCACCACTCTCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| 3UTR CAA 72 bp | TGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTGGTaGACTGACCCCAATGGGAGACAAGATACATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSEPPVPPSCLW*TDPNGRQDTCH Trigger: GTGACATGTATCTTGTCTCCCATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CAA 72 bp | CTTTTACTCTGTGTTCATAGCCCGCAGCACCTGTTGTaGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLCVHSPQHLL*LRASSATLMSV Trigger: CACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACAACAGGTGCTGCGGGCTATGAACACAGAGTAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR TCA 90 bp | CATCAGACAGAGCAGGAGGGGGATGCTGGGATAGAGACAGGTGGAAGATTGACCAACAAGACCACCTTCTaGAACTCCTCCAGGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HQTEQEGDAGIETGGRLTNKTTF*NSSRMR Trigger: ACGCATCCTGGAGGAGTTTCAGAAGGTGGTCTTGTT...GGTCAATCTTCCACCTGTCTCTATCCCAGCATCCCCCTCCTGCTCTGTCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | GACCAGGTTATCAACCATGTGGCAGACCTTAGAGTAACGGGAAGATTAGCTTATACCCTGTGCATCCGGTaGTCCTGGGCCTCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQVINHVADLRVTGRLAYTLCIR*SWASLQ Trigger: CTGCAGGGAGGCCCAGGAGCACCGGATGCACAGGGT...ATAAGCTAATCTTCCCGTTACTCTAAGGTCTGCCACATGGTTGATAACCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGGAGCTTATACTCCCTTaGAGCCTCATCCAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSRWFPSALLLCVHSPQELILP*SLIQRQ Trigger: CTGCCTCTGGATGAGGCTGCAAGGGAGTATAAGCTC...CTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | TGTTGCTCAGAGCCTCCAGTGCCACCCTCATGTCTGTGGTTGACTGACCCCAATTGTTCCTCCTTGGCTTaGAGTGTCTCCGTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CCSEPPVPPSCLWLTDPNCSSLA*SVSVFI Trigger: GATGAAGACGGAGACACTGCAAGCCAAGGAGGAACA...ATTGGGGTCAGTCAACCACAGACATGAGGGTGGCACTGGAGGCTCTGAGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | AATGCTGTCCGGAATGGACAAACTGGGATGCAGGGAACTCAACTGCCAAGCTTTGAGGCCTTGCTGTCCTaGAGCTTCCCTAAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NAVRNGQTGMQGTQLPSFEALLS*SFPKVS Trigger: GGACACCTTAGGGAAGCTGCAGGACAGCAAGGCCTC...AAAGCTTGGCAGTTGAGTTCCCTGCATCCCAGTTTGTCCATTCCGGACAGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | AGGATAGACACAAGCATGCACAAGTGCGTAACTCCAGGGCTCAGAAAAGGATGCGTGTCCTTCACATCCTaGAGCATCTGGAGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIDTSMHKCVTPGLRKGCVSFTS*SIWRGS Trigger: GGAGCCCCTCCAGATGCTGCAGGATGTGAAGGACAC...GCATCCTTTTCTGAGCCCTGGAGTTACGCACTTGTGCATGCTTGTGTCTATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGGGGAAGGAGCCCTTCTaGTTCTTCTTCCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSRWFPSALLLCVHSPQGKEPF*FFFPFL Trigger: CAAGAAAGGGAAGAAGAAGCAGAAGGGCTCCTTCCC...CTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | CAGGTTATCAACCATGTGGCAGACCTTAGAGTAACGGGAAGATTAGCTTATGAGGCTCCTGGGCCTCCCTaGAGACCACACAAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVINHVADLRVTGRLAYEAPGPP*RPHKWG Trigger: GCCCCATTTGTGTGGTCTGCAGGGAGGCCCAGGAGC...CTCATAAGCTAATCTTCCCGTTACTCTAAGGTCTGCCACATGGTTGATAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCTGCACAGAAAAGTCTGTCAGTTATACGGTGCCAGAGGGCTGAAGACTGGTTCTTGGTGTGCTTaGCACAGGTCTCGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLHRKVCQLYGARGLKTGSWCA*HRSRFC Trigger: GCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACC...AGTCTTCAGCCCTCTGGCACCGTATAACTGACAGACTTTTCTGTGCAGCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | GACAAGATACATGTCACACCATGGGCACAGAAGGGTCACAGTGGAAACATGTGCTGCAGACCACACAAATaGGGCTCTGGTCATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DKIHVTPWAQKGHSGNMCCRPHK*GSGHPG Trigger: GCCAGGATGACCAGAGCCCCATTTGTGTGGTCTGCA...GCACATGTTTCCACTGTGACCCTTCTGTGCCCATGGTGTGACATGTATCTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCTGCACAGAAAAGTCTGTCAGTTATACGGTGCCAGAGGGCTGAAGACTTGCAGACCACACAAATaGGGCTCTGGTCATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLHRKVCQLYGARGLKTCRPHK*GSGHPG Trigger: GCCAGGATGACCAGAGCCCCATTTGTGTGGTCTGCA...AGTCTTCAGCCCTCTGGCACCGTATAACTGACAGACTTTTCTGTGCAGCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | CTGATATGTACAGCAGCAAAACCTGAGGACCAGGTTATCAACCATGTGGCAGACCCATCTGGCCTGACTTaGGAGCCCCCAAGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LICTAAKPEDQVINHVADPSGLT*EPPSRR Trigger: TCTTCTGCTTGGGGGCTCCCAAGTCAGGCCAGATGG...GTCTGCCACATGGTTGATAACCTGGTCCTCAGGTTTTGCTGCTGTACATATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | AGACACAAGCATGCACAAGTGCGTAACTCCAGGGCTCAGAAAAGGATGCAGAGTAGGTCTGTTCCTCCTTaGCTTGCAGTGTCTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHKHAQVRNSRAQKRMQSRSVPP*LAVSPS Trigger: AGACGGAGACACTGCAAGCCAAGGAGGAACAGACCT...ACTCTGCATCCTTTTCTGAGCCCTGGAGTTACGCACTTGTGCATGCTTGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | GACCAGGTTATCAACCATGTGGCAGACCTTAGAGTAACGGGAAGATTAGCTTATACATCCTGCAGCATCTaGAGGGGCTCCTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DQVINHVADLRVTGRLAYTSCSI*RGSCWL Trigger: GAGCCAGCAGGAGCCCCTCCAGATGCTGCAGGATGT...ATAAGCTAATCTTCCCGTTACTCTAAGGTCTGCCACATGGTTGATAACCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGGGCATCACATCCTCTTaGAAGCTTTTGAGCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGSRWFPSALLLCVHSPQGITSS*KLLSTS Trigger: AGAGGTGCTCAAAAGCTTCCAAGAGGATGTGATGCC...CTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR TCA 90 bp | GTACAGCAGCAAAACCTGAGGACCAGGTTATCAACCATGTGGCAGACCTTAGAGAACAAGACCACCTTCTaGAACTCCTCCAGGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VQQQNLRTRLSTMWQTLENKTTF*NSSRMR Trigger: ACGCATCCTGGAGGAGTTTCAGAAGGTGGTCTTGTT...CTCTAAGGTCTGCCACATGGTTGATAACCTGGTCCTCAGGTTTTGCTGCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR TCA 90 bp | CTAAATATATCTGAGTCTCAGAGTTATCCTGGGAGCAGGGGCTGTGAGGATAGACTGGGTACTGCACGCTaGAGCTCTCCTGTTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNISESQSYPGSRGCEDRLGTAR*SSPVQG Trigger: ACCTTGAACAGGAGAGCTTCAGCGTGCAGTACCCAG...TCTATCCTCACAGCCCCTGCTCCCAGGATAACTCTGAGACTCAGATATATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047697.12 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCTGCACAGAAAAGTCTGTCAGTTATACGGTGCCAGAGGGCTGAAGACTCCTCTTGGAAGCTTTTaGGCACCTCTATCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLHRKVCQLYGARGLKTPLGSF*APLSVL Trigger: CAGGACAGATAGAGGTGCTCAAAAGCTTCCAAGAGG...AGTCTTCAGCCCTCTGGCACCGTATAACTGACAGACTTTTCTGTGCAGCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | ACACCATGGGCACAGAAGGGTCACAGTGGAAACATGTGCTATGCCAGTTCACCAAGTAGTCAAGGCAGATaGAACATGTGGCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPWAQKGHSGNMCYASSPSSQGR*NMWPPL Trigger: AAGAGGAGGCCACATGTTCCATCTGCCTTGACTACT...TGGTGAACTGGCATAGCACATGTTTCCACTGTGACCCTTCTGTGCCCATGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | GAGCATCAAAGAATCTCCCTATGGAGTTTGTTTCAAATGTGGCCACTGCCACTGGGGCTCTGGTCATCCTaGCAGAACAGCTTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EHQRISLWSLFQMWPLPLGLWSS*QNSLRG Trigger: ACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGCCC...CAGTGGCAGTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | AGGACCCGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGTGCATCCGGTGCTCCTaGGCCTCCCTGCAGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RTRFSTSKKVEHQRISLWCIRCS*ASLQTT Trigger: TGTGGTCTGCAGGGAGGCCCAGGAGCACCGGATGCA...CCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACGGGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | AGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTTGTTTCAAATGTGGCCACTGCATCCGGTGCTCCTaGGCCTCCCTGCAGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKLSIKESPYGVCFKCGHCIRCS*ASLQTT Trigger: TGTGGTCTGCAGGGAGGCCCAGGAGCACCGGATGCA...GTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | CTGATATGTACAGCAGCAAAACCTGAGGACCAGGTTATCAACCATGTGGCAGACCCCAGCTCATCTGGATaGACTCTCTGCAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LICTAAKPEDQVINHVADPSSSG*TLCRSC Trigger: ACAACTTCTGCAGAGAGTGCATCCAGATGAGCTGGG...GTCTGCCACATGGTTGATAACCTGGTCCTCAGGTTTTGCTGCTGTACATATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGTTCCACCATTATACAGGAATTCTGAGGGACTGTCAAAGCAGCTAACTGAGGCCTTGCTGTCCTaGAGCTTCCCTAAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TEVPPLYRNSEGLSKQLTEALLS*SFPKVS Trigger: GGACACCTTAGGGAAGCTGCAGGACAGCAAGGCCTC...AGTTAGCTGCTTTGACAGTCCCTCAGAATTCCTGTATAATGGTGGAACTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS-3UTR GCA 90 bp | TGCAAGAACAAGATAGCTAAGTCCTTCATCATTCCTGCTGCACAGAAAAGTCTGGTGTCCTTCACATCCTaGAGCATCTGGAGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKNKIAKSFIIPAAQKSLVSFTS*SIWRGS Trigger: GGAGCCCCTCCAGATGCTGCAGGATGTGAAGGACAC...CAGACTTTTCTGTGCAGCAGGAATGATGAAGGACTTAGCTATCTTGTTCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | AGGACCCGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGGACTCACGTTGTCCCTaGACACCCCCAAGGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTRFSTSKKVEHQRISLWDSRCP*TPPRPR Trigger: TCTGGGCCTTGGGGGTGTGCAGGGACAACGTGAGTC...CCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACGGGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
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| CDS-3UTR CCA 90 bp | GACCAGGTTATCAACCATGTGGCAGACCTTAGAGTAACGGGAAGATTAGCTTATGGGCTCTGGTCATCCTaGCAGAACAGCTTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DQVINHVADLRVTGRLAYGLWSS*QNSLRG Trigger: ACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGCCC...ATAAGCTAATCTTCCCGTTACTCTAAGGTCTGCCACATGGTTGATAACCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS-3UTR CCA 90 bp | CTAAATATATCTGAGTCTCAGAGTTATCCTGGGAGCAGGGGCTGTGAGGATAGAAGGTCTGTTCCTCCTTaGCTTGCAGTGTCTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNISESQSYPGSRGCEDRRSVPP*LAVSPS Trigger: AGACGGAGACACTGCAAGCCAAGGAGGAACAGACCT...TCTATCCTCACAGCCCCTGCTCCCAGGATAACTCTGAGACTCAGATATATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS-3UTR GCA 90 bp | AGGACCCGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGCCCCAAGGCCCAGAGTaGATCCCCGGTGAGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTRFSTSKKVEHQRISLWPQGPE*IPGEIH Trigger: ATGAATCTCACCGGGGATGCACTCTGGGCCTTGGGG...CCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACGGGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
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| CDS-3UTR CCA 90 bp | GACCAGGTTATCAACCATGTGGCAGACCTTAGAGTAACGGGAAGATTAGCTTATACACAAATGGGGCTCTaGTCATCCTGGCAGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DQVINHVADLRVTGRLAYTQMGL*SSWQNS Trigger: GCTGTTCTGCCAGGATGACCAGAGCCCCATTTGTGT...ATAAGCTAATCTTCCCGTTACTCTAAGGTCTGCCACATGGTTGATAACCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS-3UTR CCA 90 bp | ACTGAAGTTCCACCATTATACAGGAATTCTGAGGGACTGTCAAAGCAGCTAACTCCAGGGAAGGCAGCCTaGGAAAAGCTGTGTAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVPPLYRNSEGLSKQLTPGKAA*EKLCKW Trigger: CCACTTACACAGCTTTTCCCAGGCTGCCTTCCCTGG...AGTTAGCTGCTTTGACAGTCCCTCAGAATTCCTGTATAATGGTGGAACTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR TCA 90 bp | TCTTGTTCACTGTGTAAAAGCATTCACCTGTCAATAAAAGGCTTATTGGCCAATGATGACCATCTGGCCTaGCTTGGGAGCCCCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSLCKSIHLSIKGLLANDDHLA*LGSPQA Trigger: TGCTTGGGGGCTCCCAAGTCAGGCCAGATGGTCATC...ATTGGCCAATAAGCCTTTTATTGACAGGTGAATGCTTTTACACAGTGAACAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | GACCAGGTTATCAACCATGTGGCAGACCTTAGAGTAACGGGAAGATTAGCTTATGGGAAGGAGCCCTTCTaGTTCTTCTTCCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DQVINHVADLRVTGRLAYGKEPF*FFFPFL Trigger: CAAGAAAGGGAAGAAGAAGCAGAAGGGCTCCTTCCC...ATAAGCTAATCTTCCCGTTACTCTAAGGTCTGCCACATGGTTGATAACCTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | CGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTTGGTGGAGATGACCATCTaGCCTGACTTGGGAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RFSTSKKVEHQRISLWSLVEMTI*PDLGAP Trigger: GGGGGCTCCCAAGTCAGGCCAGATGGTCATCTCCAC...CAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGTTCCACCATTATACAGGAATTCTGAGGGACTGTCAAAGCAGCTAACTCCCAGCTCATCTGGATaGACTCTCTGCAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEVPPLYRNSEGLSKQLTPSSSG*TLCRSC Trigger: ACAACTTCTGCAGAGAGTGCATCCAGATGAGCTGGG...AGTTAGCTGCTTTGACAGTCCCTCAGAATTCCTGTATAATGGTGGAACTTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | AAGAACAAGATAGCTAAGTCCTTCATCATTCCTGCTGCACAGAAAAGTCTGTCAGGCAGATGGAACATGTaGCCTCCTCTTGTAACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNKIAKSFIIPAAQKSLSGRWNM*PPLVTV Trigger: GACGGTTACAAGAGGAGGCCACATGTTCCATCTGCC...TGACAGACTTTTCTGTGCAGCAGGAATGATGAAGGACTTAGCTATCTTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | TATGCCAGTTCACCATCTCACTTGAGTCCTGGCATGCTAGTAACTTTTAACAGGAGTAGTCAAGGCAGATaGAACATGTGGCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YASSPSHLSPGMLVTFNRSSQGR*NMWPPL Trigger: AAGAGGAGGCCACATGTTCCATCTGCCTTGACTACT...CCTGTTAAAAGTTACTAGCATGCCAGGACTCAAGTGAGATGGTGAACTGGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR TCA 90 bp | TCTTGTTCACTGTGTAAAAGCATTCACCTGTCAATAAAAGGCTTATTGGCCAATCTGGGTACTGCACGCTaGAGCTCTCCTTCCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSLCKSIHLSIKGLLANLGTAR*SSPSCS Trigger: TGAACAGGAAGGAGAGCTTCAGCGTGCAGTACCCAG...ATTGGCCAATAAGCCTTTTATTGACAGGTGAATGCTTTTACACAGTGAACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | CGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTTGGGCAGATGGAACATGTaGCCTCCTCTTGTAACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RFSTSKKVEHQRISLWSLGRWNM*PPLVTV Trigger: GACGGTTACAAGAGGAGGCCACATGTTCCATCTGCC...CAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | TCTTGTTCACTGTGTAAAAGCATTCACCTGTCAATAAAAGGCTTATTGGCCAATACACAAATGGGGCTCTaGTCATCCTGGCAGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLCKSIHLSIKGLLANTQMGL*SSWQNS Trigger: GCTGTTCTGCCAGGATGACCAGAGCCCCATTTGTGT...ATTGGCCAATAAGCCTTTTATTGACAGGTGAATGCTTTTACACAGTGAACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CAA 72 bp | AGTGGAAACATGTGCTATGCCAGTTCACCATCTCACTaGAGTCCTGGCATGCTAGTAACTTTTAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGNMCYASSPSH*SPGMLVTFNRN Trigger: ATTCCTGTTAAAAGTTACTAGCATGCCAGGACTCAAGTGAGATGGTGAACTGGCATAGCACATGTTTCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CAA 72 bp | CTGTGTAAAAGCATTCACCTGTCAATAAAAGGCTTATaGGCCAATGAGCTGAGGCAGGAAATTAGATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCKSIHLSIKGL*ANELRQEIRWD Trigger: GTCCCATCTAATTTCCTGCCTCAGCTCATTGGCCAATAAGCCTTTTATTGACAGGTGAATGCTTTTACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR GCA 90 bp | CGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTTGTGTTCCTCCTTGGCTTaGAGTGTCTCCGTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RFSTSKKVEHQRISLWSLCSSLA*SVSVFI Trigger: GATGAAGACGGAGACACTGCAAGCCAAGGAGGAACA...CAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGGCAACAGGACCCGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGACACCTCTATCTGTCCTaGAACTCTGCACAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFGNRTRFSTSKKVEHQRHLYLS*NSAQGL Trigger: AAGACCTTGTGCAGAGTTCCAGGACAGATAGAGGTG...TCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACGGGTCCTGTTGCCAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| 3UTR CAA 72 bp | AAGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTaGTTTCAAATGTGGCCACTGCCACTGTGCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKVEHQRISLWS*FQMWPLPLCKK Trigger: TTTCTTGCACAGTGGCAGTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| 3UTR CAA 72 bp | TTGGCAACAGGACCCGTTTTTCTACTTCAAAGAAAGTaGAGCATCAAAGAATCTCCCTATGGAGTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LATGPVFLLQRK*SIKESPYGVCF Trigger: GAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACGGGTCCTGTTGCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 90 bp | GGTTCTTGGTGTGCTTGGCACAGGTCTCGCTTCTGCAGCCCAGGGTaGTGGCGGGCCATCTCAGCCACTTTTGTCAGGAGGCGGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSWCAWHRSRFCSPG*WRAISATFVRRRLG Trigger: GCCCAACCGCCTCCTGACAAAAGTGGCTGAGATGGCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 90 bp | GGGGCTCTGGTCATCCTGGCAGAACAGCTTAAGGGGTTCTTGGTGTaGTTGGCACAGGTCTCGCTTCTGCAGCCCAGGGTGCTGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GALVILAEQLKGFLV*LAQVSLLQPRVLAG Trigger: GCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | TCTTGGTGTGCTTGGCACAGGTCTCGCTTCTGCAGCCCAGGGTGCTaGCGGGCCATCTCAGCCACTTTTGTCAGGAGGCGGTTGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SWCAWHRSRFCSPGC*RAISATFVRRRLGL Trigger: GAGGCCCAACCGCCTCCTGACAAAAGTGGCTGAGATGGCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | CTTGCAGCCTCATCCAGAGGCAGCACCCTGTGCATCCGGTGCTCCTaGGCCTCCCTGCAGACCACACAAATGGGGCTCTGGTCATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAASSRGSTLCIRCS*ASLQTTQMGLWSSW Trigger: CCAGGATGACCAGAGCCCCATTTGTGTGGTCTGCAGGGAGGCCCAGGAGCACCGGATGCACAGGGTGCTGCCTCTGGATGAGGCTGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | CTCCGCTCCTCCAGCTGCAACAGGATCAGGTCCAGGGAGCGGCTTTaGTGGTCCAGGGAGGCCTTGCTGTCCTGCAGCTTCCCTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRSSSCNRIRSRERL*WSREALLSCSFPKV Trigger: CACCTTAGGGAAGCTGCAGGACAGCAAGGCCTCCCTGGACCACCAAAGCCGCTCCCTGGACCTGATCCTGTTGCAGCTGGAGGAGCGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 90 bp | TACTCCCTTGCAGCCTCATCCAGAGGCAGCACCCTGTGCATCCGGTaGTCCTGGGCCTCCCTGCAGACCACACAAATGGGGCTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YSLAASSRGSTLCIR*SWASLQTTQMGLWS Trigger: TGACCAGAGCCCCATTTGTGTGGTCTGCAGGGAGGCCCAGGAGCACCGGATGCACAGGGTGCTGCCTCTGGATGAGGCTGCAAGGGAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | TTCAAGGTGTCCTTCACATCCTGCAGCATCTGGAGGGGCTCCTGCTaGCTCCGCTCCTCCAGCTGCAACAGGATCAGGTCCAGGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FKVSFTSCSIWRGSC*LRSSSCNRIRSRER Trigger: CCGCTCCCTGGACCTGATCCTGTTGCAGCTGGAGGAGCGGAGCCAGCAGGAGCCCCTCCAGATGCTGCAGGATGTGAAGGACACCTTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 90 bp | AGGTCCAGGGAGCGGCTTTGGTGGTCCAGGGAGGCCTTGCTGTCCTaGAGCTTCCCTAAGGTGTCCTCTTCCTCCTTCTTCAGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRERLWWSREALLS*SFPKVSSSSFFRTW Trigger: CCAGGTCCTGAAGAAGGAGGAAGAGGACACCTTAGGGAAGCTGCAGGACAGCAAGGCCTCCCTGGACCACCAAAGCCGCTCCCTGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 90 bp | CTGTTCAAGGTGTCCTTCACATCCTGCAGCATCTGGAGGGGCTCCTaGTGGCTCCGCTCCTCCAGCTGCAACAGGATCAGGTCCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKVSFTSCSIWRGS*WLRSSSCNRIRSRE Trigger: CTCCCTGGACCTGATCCTGTTGCAGCTGGAGGAGCGGAGCCAGCAGGAGCCCCTCCAGATGCTGCAGGATGTGAAGGACACCTTGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | CTCTGGTCATCCTGGCAGAACAGCTTAAGGGGTTCTTGGTGTGCTTaGCACAGGTCTCGCTTCTGCAGCCCAGGGTGCTGGCGGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LWSSWQNSLRGSWCA*HRSRFCSPGCWRAI Trigger: GATGGCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 90 bp | AACAGCTTAAGGGGTTCTTGGTGTGCTTGGCACAGGTCTCGCTTCTaGAGCCCAGGGTGCTGGCGGGCCATCTCAGCCACTTTTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLRGSWCAWHRSRF*SPGCWRAISATFVR Trigger: CCTGACAAAAGTGGCTGAGATGGCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | ATCCGGTGCTCCTGGGCCTCCCTGCAGACCACACAAATGGGGCTCTaGTCATCCTGGCAGAACAGCTTAAGGGGTTCTTGGTGTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IRCSWASLQTTQMGL*SSWQNSLRGSWCAW Trigger: CCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGCCCCATTTGTGTGGTCTGCAGGGAGGCCCAGGAGCACCGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | ACCCTGAGAGTGGTGACCAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTCCAGGGAGCGGCTTaGGTGGTCCAGGGAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLRVVTKGVGGFPLHFYSVQGAA*VVQGGL Trigger: AAGGCCTCCCTGGACCACCAAAGCCGCTCCCTGGAC...AGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTGGTCACCACTCTCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 90 bp | CTGCACAAGGTCTTGATAGCCGCGGGGAGGACCACCTCTGGGTACTaGACGCTGAAGCTCTCCTTCCTGTTCAAGGTGTCCTTCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: LHKVLIAAGRTTSGY*TLKLSFLFKVSFTS Trigger: GGATGTGAAGGACACCTTGAACAGGAAGGAGAGCTTCAGCGTGCAGTACCCAGAGGTGGTCCTCCCCGCGGCTATCAAGACCTTGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | TCCTGGGCCTCCCTGCAGACCACACAAATGGGGCTCTGGTCATCCTaGCAGAACAGCTTAAGGGGTTCTTGGTGTGCTTGGCACAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWASLQTTQMGLWSS*QNSLRGSWCAWHRS Trigger: AGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGCCCCATTTGTGTGGTCTGCAGGGAGGCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCCCGCAGCTGGTCCAGGGAGGCCTaGCTGTCCTGCAGCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGVGGFPLHFYSVFIARSWSREA*LSCSFP Trigger: AGGGAAGCTGCAGGACAGCAAGGCCTCCCTGGACCA...GCTGCGGGCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | CGGCATCACATCCTCTTGGAAGCTTTTGAGCACCTCTATCTGTCCTaGAACTCTGCACAAGGTCTTGATAGCCGCGGGGAGGACCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: RHHILLEAFEHLYLS*NSAQGLDSRGEDHL Trigger: GAGGTGGTCCTCCCCGCGGCTATCAAGACCTTGTGCAGAGTTCCAGGACAGATAGAGGTGCTCAAAAGCTTCCAAGAGGATGTGATGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | GTGAGGATAGACACAAGCATGCACAAGTGCGTAACTCCAGGGCTCAGAAAAGGATGGTCCAGGGAGGCCTaGCTGTCCTGCAGCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRIDTSMHKCVTPGLRKGWSREA*LSCSFP Trigger: AGGGAAGCTGCAGGACAGCAAGGCCTCCCTGGACCA...TCCTTTTCTGAGCCCTGGAGTTACGCACTTGTGCATGCTTGTGTCTATCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | GGTGACCAAGGGAGTCGGTGGTTTCCCTCTGCACTTTTACTCTGTGTTCATAGCAAGGTCTGTTCCTCCTaGGCTTGCAGTGTCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GDQGSRWFPSALLLCVHSKVCSS*ACSVSV Trigger: GACGGAGACACTGCAAGCCAAGGAGGAACAGACCTT...GCTATGAACACAGAGTAAAAGTGCAGAGGGAAACCACCGACTCCCTTGGTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 90 bp | GCTCTTTCACTCTCTCCTGCCACTCAGTTAAGGTCTGTTCCTCCTTaGCTTGCAGTGTCTCCGTCTTCATCATCTCCTCCCGTAGATATT | + |
|
Preference number: 5 (lower is better) Translates to: ALSLSPATQLRSVPP*LAVSPSSSSPPVDI Trigger: AATATCTACGGGAGGAGATGATGAAGACGGAGACACTGCAAGCCAAGGAGGAACAGACCTTAACTGAGTGGCAGGAGAGAGTGAAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | AATGCTGTCCGGAATGGACAAACTGGGATGCAGGGAACTCAACTGCCAAGCTTTTTCTTCTTCCCTTTCTaGACCTTCCCCTTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NAVRNGQTGMQGTQLPSFFFFPF*TFPFSQ Trigger: CTGGGAGAAGGGGAAGGTCAAGAAAGGGAAGAAGAA...AAAGCTTGGCAGTTGAGTTCCCTGCATCCCAGTTTGTCCATTCCGGACAGCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | AATGGGAGACAAGATACATGTCACACCATGGGCACAGAAGGGTCACAGTGGAAACTGTTCCTCCTTGGCTaGCAGTGTCTCCGTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NGRQDTCHTMGTEGSQWKLFLLG*QCLRLH Trigger: ATGAAGACGGAGACACTGCAAGCCAAGGAGGAACAG...TTTCCACTGTGACCCTTCTGTGCCCATGGTGTGACATGTATCTTGTCTCCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | TCTTGTTCACTGTGTAAAAGCATTCACCTGTCAATAAAAGGCTTATTGGCCAATGTCCAGGGAGCGGCTTaGGTGGTCCAGGGAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSLCKSIHLSIKGLLANVQGAA*VVQGGL Trigger: AAGGCCTCCCTGGACCACCAAAGCCGCTCCCTGGAC...ATTGGCCAATAAGCCTTTTATTGACAGGTGAATGCTTTTACACAGTGAACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 90 bp | TTCACTCTCTCCTGCCACTCAGTTAAGGTCTGTTCCTCCTTGGCTTaGAGTGTCTCCGTCTTCATCATCTCCTCCCGTAGATATTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: FTLSCHSVKVCSSLA*SVSVFIISSRRYFM Trigger: CATAAAATATCTACGGGAGGAGATGATGAAGACGGAGACACTGCAAGCCAAGGAGGAACAGACCTTAACTGAGTGGCAGGAGAGAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | AAGAACAAGATAGCTAAGTCCTTCATCATTCCTGCTGCACAGAAAAGTCTGTCAAAGGTCTGTTCCTCCTaGGCTTGCAGTGTCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KNKIAKSFIIPAAQKSLSKVCSS*ACSVSV Trigger: GACGGAGACACTGCAAGCCAAGGAGGAACAGACCTT...TGACAGACTTTTCTGTGCAGCAGGAATGATGAAGGACTTAGCTATCTTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | AGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTTTGTTTCAAATGTGGCCACCGGCATCACATCCTCTaGGAAGCTTTTGAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: RKLSIKESPYGVCFKCGHRHHIL*EAFEHL Trigger: GAGGTGCTCAAAAGCTTCCAAGAGGATGTGATGCCG...GTGGCCACATTTGAAACAAACTCCATAGGGAGATTCTTTGATGCTCAACTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS-3UTR CAA 90 bp | ACCCGTTTTTCTACTTCAAAGAAAGTTGAGCATCAAAGAATCTCCCTATGGAGTCTGTTCCTCCTTGGCTaGCAGTGTCTCCGTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRFSTSKKVEHQRISLWSLFLLG*QCLRLH Trigger: ATGAAGACGGAGACACTGCAAGCCAAGGAGGAACAG...ACTCCATAGGGAGATTCTTTGATGCTCAACTTTCTTTGAAGTAGAAAAACGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 72 bp | GCTTGGCACAGGTCTCGCTTCTGCAGCCCAGGGTGCTaGCGGGCCATCTCAGCCACTTTTGTCAGGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AWHRSRFCSPGC*RAISATFVRRR Trigger: CCGCCTCCTGACAAAAGTGGCTGAGATGGCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 72 bp | AGGGGTTCTTGGTGTGCTTGGCACAGGTCTCGCTTCTaGAGCCCAGGGTGCTGGCGGGCCATCTCAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RGSWCAWHRSRF*SPGCWRAISAT Trigger: AGTGGCTGAGATGGCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 72 bp | TCATCCAGAGGCAGCACCCTGTGCATCCGGTGCTCCTaGGCCTCCCTGCAGACCACACAAATGGGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRGSTLCIRCS*ASLQTTQMGLW Trigger: CCAGAGCCCCATTTGTGTGGTCTGCAGGGAGGCCCAGGAGCACCGGATGCACAGGGTGCTGCCTCTGGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 72 bp | TGTGCTTGGCACAGGTCTCGCTTCTGCAGCCCAGGGTaGTGGCGGGCCATCTCAGCCACTTTTGTCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CAWHRSRFCSPG*WRAISATFVRR Trigger: CCTCCTGACAAAAGTGGCTGAGATGGCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 72 bp | GGTCCAGGGAGCGGCTTTGGTGGTCCAGGGAGGCCTTaGTGTCCTGCAGCTTCCCTAAGGTGTCCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPGSGFGGPGRP*CPAASLRCPLP Trigger: AGGAAGAGGACACCTTAGGGAAGCTGCAGGACAGCAAGGCCTCCCTGGACCACCAAAGCCGCTCCCTGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 72 bp | TCCAGCTGCAACAGGATCAGGTCCAGGGAGCGGCTTTaGTGGTCCAGGGAGGCCTTGCTGTCCTGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSCNRIRSRERL*WSREALLSCSF Trigger: GAAGCTGCAGGACAGCAAGGCCTCCCTGGACCACCAAAGCCGCTCCCTGGACCTGATCCTGTTGCAGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 72 bp | TCCTTCACATCCTGCAGCATCTGGAGGGGCTCCTGCTaGCTCCGCTCCTCCAGCTGCAACAGGATCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFTSCSIWRGSC*LRSSSCNRIRS Trigger: GGACCTGATCCTGTTGCAGCTGGAGGAGCGGAGCCAGCAGGAGCCCCTCCAGATGCTGCAGGATGTGAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CAA 72 bp | CTCCAGCTGCAACAGGATCAGGTCCAGGGAGCGGCTTaGGTGGTCCAGGGAGGCCTTGCTGTCCTGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQLQQDQVQGAA*VVQGGLAVLQL Trigger: AAGCTGCAGGACAGCAAGGCCTCCCTGGACCACCAAAGCCGCTCCCTGGACCTGATCCTGTTGCAGCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CAA 90 bp | GCTCTGGTCATCCTGGCAGAACAGCTTAAGGGGTTCTTGGTGTGCTaGGCACAGGTCTCGCTTCTGCAGCCCAGGGTGCTGGCGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ALVILAEQLKGFLVC*AQVSLLQPRVLAGH Trigger: ATGGCCCGCCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 72 bp | GTCTTGATAGCCGCGGGGAGGACCACCTCTGGGTACTaGACGCTGAAGCTCTCCTTCCTGTTCAAGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLIAAGRTTSGY*TLKLSFLFKVS Trigger: GGACACCTTGAACAGGAAGGAGAGCTTCAGCGTGCAGTACCCAGAGGTGGTCCTCCCCGCGGCTATCAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS CCA 72 bp | TCCTGGCAGAACAGCTTAAGGGGTTCTTGGTGTGCTTaGCACAGGTCTCGCTTCTGCAGCCCAGGGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWQNSLRGSWCA*HRSRFCSPGCW Trigger: CCAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CAA 90 bp | ACAAATGGGGCTCTGGTCATCCTGGCAGAACAGCTTAAGGGGTTCTaGGTGTGCTTGGCACAGGTCTCGCTTCTGCAGCCCAGGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TNGALVILAEQLKGF*VCLAQVSLLQPRVL Trigger: CAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGCCCCATTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS GCA 72 bp | GTCATCCTGGCAGAACAGCTTAAGGGGTTCTTGGTGTaGTTGGCACAGGTCTCGCTTCTGCAGCCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VILAEQLKGFLV*LAQVSLLQPRV Trigger: CACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CCA 72 bp | TCCTGGGCCTCCCTGCAGACCACACAAATGGGGCTCTaGTCATCCTGGCAGAACAGCTTAAGGGGTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWASLQTTQMGL*SSWQNSLRGSW Trigger: CCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGCCCCATTTGTGTGGTCTGCAGGGAGGCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CAA 72 bp | ATCCTGGCAGAACAGCTTAAGGGGTTCTTGGTGTGCTaGGCACAGGTCTCGCTTCTGCAGCCCAGGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ILAEQLKGFLVC*AQVSLLQPRVL Trigger: CAGCACCCTGGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CAA 72 bp | GCTCTGGTCATCCTGGCAGAACAGCTTAAGGGGTTCTaGGTGTGCTTGGCACAGGTCTCGCTTCTGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALVILAEQLKGF*VCLAQVSLLQP Trigger: GGGCTGCAGAAGCGAGACCTGTGCCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
||
| CDS CAA 72 bp | AGCACCTCTATCTGTCCTGGAACTCTGCACAAGGTCTaGATAGCCGCGGGGAGGACCACCTCTGGGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: STSICPGTLHKV*IAAGRTTSGYC Trigger: GCAGTACCCAGAGGTGGTCCTCCCCGCGGCTATCAAGACCTTGTGCAGAGTTCCAGGACAGATAGAGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS CAA 90 bp | AAGCTTTTGAGCACCTCTATCTGTCCTGGAACTCTGCACAAGGTCTaGATAGCCGCGGGGAGGACCACCTCTGGGTACTGCACGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KLLSTSICPGTLHKV*IAAGRTTSGYCTLK Trigger: CTTCAGCGTGCAGTACCCAGAGGTGGTCCTCCCCGCGGCTATCAAGACCTTGTGCAGAGTTCCAGGACAGATAGAGGTGCTCAAAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
||
| CDS CCA 72 bp | TCCCTGCAGACCACACAAATGGGGCTCTGGTCATCCTaGCAGAACAGCTTAAGGGGTTCTTGGTGTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLQTTQMGLWSS*QNSLRGSWCAW Trigger: CCAAGCACACCAAGAACCCCTTAAGCTGTTCTGCCAGGATGACCAGAGCCCCATTTGTGTGGTCTGCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS TCA 72 bp | AGCTGGGGTCCGGCATCACATCCTCTTGGAAGCTTTTaGGCACCTCTATCTGTCCTGGAACTCTGCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: SWGPASHPLGSF*APLSVLELCTR Trigger: CCTTGTGCAGAGTTCCAGGACAGATAGAGGTGCTCAAAAGCTTCCAAGAGGATGTGATGCCGGACCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
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| CDS GCA 72 bp | TCCAGGATGCGTTCTCTCCGCTCTTTCACTCTCTCCTaGCACTCAGTTAAGGTCTGTTCCTCCTTGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SRMRSLRSFTLS*HSVKVCSSLAC Trigger: GCAAGCCAAGGAGGAACAGACCTTAACTGAGTGGCAGGAGAGAGTGAAAGAGCGGAGAGAACGCATCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS CCA 72 bp | CTCTCTCCTGCCACTCAGTTAAGGTCTGTTCCTCCTTaGCTTGCAGTGTCTCCGTCTTCATCATCTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LSPATQLRSVPP*LAVSPSSSSPP Trigger: GGGAGGAGATGATGAAGACGGAGACACTGCAAGCCAAGGAGGAACAGACCTTAACTGAGTGGCAGGAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS CAA 72 bp | GAGCTGGGGTCCGGCATCACATCCTCTTGGAAGCTTTaGAGCACCTCTATCTGTCCTGGAACTCTGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: ELGSGITSSWKL*STSICPGTLHK Trigger: CTTGTGCAGAGTTCCAGGACAGATAGAGGTGCTCAAAAGCTTCCAAGAGGATGTGATGCCGGACCCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
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| CDS GCA 72 bp | TTTTATGTCCTCCTCCAACTTGAGCTTATACTCCCTTaGAGCCTCATCCAGAGGCAGCACCCTGTGCATCCG | + |
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Preference number: 6 (lower is better) Translates to: FYVLLQLELILP*SLIQRQHPVHP Trigger: CGGATGCACAGGGTGCTGCCTCTGGATGAGGCTGCAAGGGAGTATAAGCTCAAGTTGGAGGAGGACATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS GCA 72 bp | TCCTGCCACTCAGTTAAGGTCTGTTCCTCCTTGGCTTaGAGTGTCTCCGTCTTCATCATCTCCTCCCGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SCHSVKVCSSLA*SVSVFIISSRR Trigger: TCTACGGGAGGAGATGATGAAGACGGAGACACTGCAAGCCAAGGAGGAACAGACCTTAACTGAGTGGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS CAA 72 bp | ACTCTCTCCTGCCACTCAGTTAAGGTCTGTTCCTCCTaGGCTTGCAGTGTCTCCGTCTTCATCATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TLSCHSVKVCSS*ACSVSVFIISS Trigger: GGAGGAGATGATGAAGACGGAGACACTGCAAGCCAAGGAGGAACAGACCTTAACTGAGTGGCAGGAGAGAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS CAA 90 bp | GGGTATGCTGAGCTGGGGTCCGGCATCACATCCTCTTGGAAGCTTTaGAGCACCTCTATCTGTCCTGGAACTCTGCACAAGGTCTTGATA | + |
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Preference number: 6 (lower is better) Translates to: GYAELGSGITSSWKL*STSICPGTLHKVLI Trigger: TATCAAGACCTTGTGCAGAGTTCCAGGACAGATAGAGGTGCTCAAAAGCTTCCAAGAGGATGTGATGCCGGACCCCAGCTCAGCATACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075141.7 |
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| CDS CAA 90 bp | CGCTCTTTCACTCTCTCCTGCCACTCAGTTAAGGTCTGTTCCTCCTaGGCTTGCAGTGTCTCCGTCTTCATCATCTCCTCCCGTAGATAT | + |
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Preference number: 6 (lower is better) Translates to: RSFTLSCHSVKVCSS*ACSVSVFIISSRRY Trigger: ATATCTACGGGAGGAGATGATGAAGACGGAGACACTGCAAGCCAAGGAGGAACAGACCTTAACTGAGTGGCAGGAGAGAGTGAAAGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS CCA 72 bp | TTCCCTAAGGTGTCCTCTTCCTCCTTCTTCAGGACCTaGAGGATCCTCCGTTCTTCTTCCACCAGAAACAAG | + |
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Preference number: 6 (lower is better) Translates to: FPKVSSSSFFRT*RILRSSSTRNK Trigger: CTTGTTTCTGGTGGAAGAAGAACGGAGGATCCTCCAGGTCCTGAAGAAGGAGGAAGAGGACACCTTAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS TCA 72 bp | TCTCCTCCCGTAGATATTTTATGTCCTCCTCCAACTTaGGCTTATACTCCCTTGCAGCCTCATCCAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SPPVDILCPPPT*AYTPLQPHPEA Trigger: TGCCTCTGGATGAGGCTGCAAGGGAGTATAAGCTCAAGTTGGAGGAGGACATAAAATATCTACGGGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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| CDS CAA 72 bp | ATCTCCTCCCGTAGATATTTTATGTCCTCCTCCAACTaGAGCTTATACTCCCTTGCAGCCTCATCCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ISSRRYFMSSSN*SLYSLAASSRG Trigger: GCCTCTGGATGAGGCTGCAAGGGAGTATAAGCTCAAGTTGGAGGAGGACATAAAATATCTACGGGAGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047697.12 ENSMUST00000075141.7 |
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