Pregenerated sensors for TRIM16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047821Ensembl transcript IDs: ENSMUST00000055006.12, ENSMUST00000072639.10, ENSMUST00000108703.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATCCTGCCGCTGCTGCTGCTGCTGCTGTGTCAGGGATGAGGGCATaGTCAGATGGTGCAAGGCTGGATGACCAAGTTGAGCCTGGCACA | + |
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Preference number: 1 (lower is better) Translates to: DPAAAAAAAVSGMRA*SDGARLDDQVEPGT Trigger: TGTGCCAGGCTCAACTTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGCAGCAGCAGCAGCGGCAGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR TCA 90 bp | TTGAAGATCCCTAGTTGGAAATTCTGGATGACGGTGACAGTCACCTaGGCAGACAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LKIPSWKFWMTVTVT*ADRRPSLEDVRRGF Trigger: AAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTGTCTGCTCAGGTGACTGTCACCGTCATCCAGAATTTCCAACTAGGGATCTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR TCA 90 bp | GTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTaGCTCTGCAGGGAAACTATTTCTGCTGGAAGGAGAGGCAATGCA | + |
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Preference number: 1 (lower is better) Translates to: VSVTLDQDLDLREGR*LCRETISAGRRGNA Trigger: TGCATTGCCTCTCCTTCCAGCAGAAATAGTTTCCCTGCAGAGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR CCA 90 bp | AGGAACTATCCCTTTGGGCAAGAAAATAGACAAGTCCATGAAGTCTaGGTGACCTTAGCAGAGAGGATGACTACTCCTCTCAAAAGGACC | + |
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Preference number: 1 (lower is better) Translates to: RNYPFGQENRQVHEV*VTLAERMTTPLKRT Trigger: GGTCCTTTTGAGAGGAGTAGTCATCCTCTCTGCTAAGGTCACCCAGACTTCATGGACTTGTCTATTTTCTTGCCCAAAGGGATAGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR TCA 90 bp | AAGAAAAGAAGAAAGGGCAGGCCAGGGAAACACGCCTTTCTCTTTTaGAGAGTATTCTTTACCTGCTGGATCCAAGAAATTCACATTGAT | + |
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Preference number: 1 (lower is better) Translates to: KKRRKGRPGKHAFLF*RVFFTCWIQEIHID Trigger: ATCAATGTGAATTTCTTGGATCCAGCAGGTAAAGAATACTCTTCAAAAGAGAAAGGCGTGTTTCCCTGGCCTGCCCTTTCTTCTTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAAACGGTGACAGTCACCTaGGCAGACAGGAGACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: AAVSGMRACSDGARLDDQTVTVT*ADRRPS Trigger: TGAGGGTCTCCTGTCTGCTCAGGTGACTGTCACCGT...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTGACCTTAGCAGAGAGGATGACTACTCCTCTCAAAAGGACCTCGCTAAACGCTGCTGCTGCTGCTaGTGTGTCAGGGATGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LGDLSREDDYSSQKDLAKRCCCC*CVRDEG Trigger: GCCCTCATCCCTGACACAGCAGCAGCAGCAGCAGCG...TTTAGCGAGGTCCTTTTGAGAGGAGTAGTCATCCTCTCTGCTAAGGTCACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAACCCCCATTTATTGGGTaGCCAGACAAGTTAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: AAVSGMRACSDGARLDDQPPFIG*PDKLAD Trigger: GTCAGCTAACTTGTCTGGTCACCCAATAAATGGGGG...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAACGCTGCTGCTGCTGCTaGTGTGTCAGGGATGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PGQLGPRCEALSQIKRKERCCCC*CVRDEG Trigger: GCCCTCATCCCTGACACAGCAGCAGCAGCAGCAGCG...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAAATGCAAGAACTGTCTTaGGAAGCAGGCGGGAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: AAVSGMRACSDGARLDDQMQELS*EAGGKV Trigger: AACTTTCCCGCCTGCTTCTCAAGACAGTTCTTGCAT...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTGACCTTAGCAGAGAGGATGACTACTCCTCTCAAAAGGACCTCGCTAAAACGGTGACAGTCACCTaGGCAGACAGGAGACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LGDLSREDDYSSQKDLAKTVTVT*ADRRPS Trigger: TGAGGGTCTCCTGTCTGCTCAGGTGACTGTCACCGT...TTTAGCGAGGTCCTTTTGAGAGGAGTAGTCATCCTCTCTGCTAAGGTCACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTGACCTTAGCAGAGAGGATGACTACTCCTCTCAAAAGGACCTCGCTAAACCCCCATTTATTGGGTaGCCAGACAAGTTAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LGDLSREDDYSSQKDLAKPPFIG*PDKLAD Trigger: GTCAGCTAACTTGTCTGGTCACCCAATAAATGGGGG...TTTAGCGAGGTCCTTTTGAGAGGAGTAGTCATCCTCTCTGCTAAGGTCACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR CAA 90 bp | AGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTaGACTCTGCAGGGAAACTATTTCTGCTGGAAGGAGAGGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: SLSNSGPGFRLERRP*TLQGNYFCWKERQC Trigger: GCATTGCCTCTCCTTCCAGCAGAAATAGTTTCCCTGCAGAGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAAAGTCTTGTTATGGTTTaGAGATCCCTAGTTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: AAVSGMRACSDGARLDDQSLVMV*RSLVGN Trigger: ATTTCCAACTAGGGATCTTCAAACCATAACAAGACT...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTCTGTCCCCAAATACCTaGGGAACTATCCCTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: HSLSNSGPGFRLERRPLTLSPNT*GTIPLG Trigger: GCCCAAAGGGATAGTTCCTCAGGTATTTGGGGACAG...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTACTATCATGTGCTGCTaGTTAATGGTGATCCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: HSLSNSGPGFRLERRPLTTIMCC*LMVILP Trigger: CGGCAGGATCACCATTAATCAGCAGCACATGATAGT...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAACTGTCTAAAGGAGAATaGAGTCATCAACAGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PGQLGPRCEALSQIKRKELSKGE*SHQQGV Trigger: GACACCCTGTTGATGACTTCATTCTCCTTTAGACAG...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTGTGTGCATAAAGGCTTaGTGGATGTTCATCGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: HSLSNSGPGFRLERRPLTVCIKA*WMFIVC Trigger: ACAGACGATGAACATCCATCAAGCCTTTATGCACAC...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTCAATGCACTAGATCATaGAAGTATCTCAGTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HSLSNSGPGFRLERRPLTQCTRS*KYLSAG Trigger: CCCTGCACTGAGATACTTTCATGATCTAGTGCATTG...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTGAGGAGAGGCTTTTGTaGCTTAGAGTTTCTGCATTC | + |
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Preference number: 2 (lower is better) Translates to: HSLSNSGPGFRLERRPLTEERLL*LRVSAF Trigger: GAATGCAGAAACTCTAAGGCACAAAAGCCTCTCCTC...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR CAA 90 bp | GTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTaGGACATTGGGAATGACACAGGTTTGGGTCTAGCTGCCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VSLSTFSVPSLLPKC*DIGNDTGLGLAAQE Trigger: CTCTTGGGCAGCTAGACCCAAACCTGTGTCATTCCCAATGTCCAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
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| 3UTR CAA 90 bp | ATGTGTTTGCGATTTATTATGATCCCTGTGCAGTCTTGTTATGGTTaGAAGATCCCTAGTTGGAAATTCTGGATGACGGTGACAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: MCLRFIMIPVQSCYG*KIPSWKFWMTVTVT Trigger: GGTGACTGTCACCGTCATCCAGAATTTCCAACTAGGGATCTTCAAACCATAACAAGACTGCACAGGGATCATAATAAATCGCAAACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAAACATTTACCCCATAAAGATGAACTAACAAAGAGAAAGCACTCCAAACGCATGCAAGAACTGTCTTaGGAAGCAGGCGGGAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: CKHLPHKDELTKRKHSKRMQELS*EAGGKV Trigger: AACTTTCCCGCCTGCTTCTCAAGACAGTTCTTGCAT...GCGTTTGGAGTGCTTTCTCTTTGTTAGTTCATCTTTATGGGGTAAATGTTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGGTGTGCATAAAGGCTTaGTGGATGTTCATCGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LESSQISLKQHTVETGSRVCIKA*WMFIVC Trigger: ACAGACGATGAACATCCATCAAGCCTTTATGCACAC...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGTTGAACAAGAAGATTTaGCTTGACACAGGTCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LESSQISLKQHTVETGSRLNKKI*LDTGRG Trigger: CCCACGACCTGTGTCAAGGCAAATCTTCTTGTTCAA...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGGAGTTTCTGCATTCATaGAAGAACTGTCTTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LESSQISLKQHTVETGSREFLHS*KNCLEK Trigger: CTTCTCAAGACAGTTCTTGCATGAATGCAGAAACTC...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAAACATTTACCCCATAAAGATGAACTAACAAAGAGAAAGCACTCCAAACGCGAGTTTCTGCATTCATaGAAGAACTGTCTTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CKHLPHKDELTKRKHSKREFLHS*KNCLEK Trigger: CTTCTCAAGACAGTTCTTGCATGAATGCAGAAACTC...GCGTTTGGAGTGCTTTCTCTTTGTTAGTTCATCTTTATGGGGTAAATGTTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR GCA 72 bp | GCTGCTGCTGCTGCTGCTGTGTCAGGGATGAGGGCATaGTCAGATGGTGCAAGGCTGGATGACCAAGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: AAAAAAVSGMRA*SDGARLDDQVE Trigger: CTCAACTTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGCAGCAGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAACATGCAAGAACTGTCTaGAGAAGCAGGCGGGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: AAVSGMRACSDGARLDDQHARTV*RSRRES Trigger: ACTTTCCCGCCTGCTTCTCAAGACAGTTCTTGCATG...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR CAA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTGGCTGGATGACCAAGTaGAGCCTGGCACATGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: HSLSNSGPGFRLERRPLTGWMTK*SLAHAE Trigger: TTCTGCATGTGCCAGGCTCAACTTGGTCATCCAGCC...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR CCA 72 bp | CCCTTTGGGCAAGAAAATAGACAAGTCCATGAAGTCTaGGTGACCTTAGCAGAGAGGATGACTACTCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PFGQENRQVHEV*VTLAERMTTPL Trigger: GAGAGGAGTAGTCATCCTCTCTGCTAAGGTCACCCAGACTTCATGGACTTGTCTATTTTCTTGCCCAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAATGTGAGGAGAGGCTTTaGTGCCTTAGAGTTTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: PGQLGPRCEALSQIKRKECEERL*CLRVSA Trigger: TGCAGAAACTCTAAGGCACAAAAGCCTCTCCTCACA...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR CAA 90 bp | AACCAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTCATGCAAGAACTGTCTaGAGAAGCAGGCGGGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: NQTLKRNAQDCGLCGLVCHARTV*RSRRES Trigger: ACTTTCCCGCCTGCTTCTCAAGACAGTTCTTGCATG...ACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAAAAAAGCTCTTTGATCTaGTTCAGTGGGAAAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PGQLGPRCEALSQIKRKEKSSLI*FSGKGR Trigger: CCTCCCTTTCCCACTGAACAAGATCAAAGAGCTTTT...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR TCA 72 bp | TGCCTTAGAGTTTCTGCATTCATGCAAGAACTGTCTTaGGAAGCAGGCGGGAAAGTTCATTCAGGACCCACA | + |
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Preference number: 3 (lower is better) Translates to: CLRVSAFMQELS*EAGGKVHSGPT Trigger: TGTGGGTCCTGAATGAACTTTCCCGCCTGCTTCTCAAGACAGTTCTTGCATGAATGCAGAAACTCTAAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR GCA 72 bp | AGGAGAGGCTTTTGTGCCTTAGAGTTTCTGCATTCATaGAAGAACTGTCTTGAGAAGCAGGCGGGAAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: RRGFCALEFLHS*KNCLEKQAGKF Trigger: GAACTTTCCCGCCTGCTTCTCAAGACAGTTCTTGCATGAATGCAGAAACTCTAAGGCACAAAAGCCTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR GCA 72 bp | CAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATaGGGTTTAGTGTGTGGTTTACCCCTCAGGCATAAC | + |
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Preference number: 3 (lower is better) Translates to: QTLKRNAQDCGL*GLVCGLPLRHN Trigger: GTTATGCCTGAGGGGTAAACCACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR GCA 72 bp | GAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTTGTaGCTTAGAGTTTCTGCATTCATGCAAGAACTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ETLTRRCEERLL*LRVSAFMQELS Trigger: AGACAGTTCTTGCATGAATGCAGAAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR GCA 72 bp | AAATTCACATTGATTTCTGCCATTGAAGAGGTCCTTTaGGGAGCTGAGCTGAGCATAGGTAGCTCATGCTTG | + |
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Preference number: 3 (lower is better) Translates to: KFTLISAIEEVL*GAELSIGSSCL Trigger: CAAGCATGAGCTACCTATGCTCAGCTCAGCTCCGCAAAGGACCTCTTCAATGGCAGAAATCAATGTGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR CAA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTCACACAGCGATGTGTTaGCGATTTATTATGATCCCT | + |
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Preference number: 3 (lower is better) Translates to: HSLSNSGPGFRLERRPLTHTAMC*RFIMIP Trigger: AGGGATCATAATAAATCGCAAACACATCGCTGTGTG...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGACAGGGAATGACACAGGTTaGGGTCTAGCTGCCCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LFLCPHFQSRVYYLNVWTGNDTG*GLAAQE Trigger: CTCTTGGGCAGCTAGACCCAAACCTGTGTCATTCCC...TGTCCAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
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| 3UTR TCA 72 bp | AGAAAGGGCAGGCCAGGGAAACACGCCTTTCTCTTTTaGAGAGTATTCTTTACCTGCTGGATCCAAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: RKGRPGKHAFLF*RVFFTCWIQEI Trigger: AATTTCTTGGATCCAGCAGGTAAAGAATACTCTTCAAAAGAGAAAGGCGTGTTTCCCTGGCCTGCCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGAGTTCAACAACAGACTaGAATCCCAGATCTGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: LESSQISLKQHTVETGSRSSTTD*NPRSAP Trigger: GGGGGCAGATCTGGGATTCAAGTCTGTTGTTGAACT...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR TCA 72 bp | AGTATTCTTTACCTGCTGGATCCAAGAAATTCACATTaGTTTCTGCCATTGAAGAGGTCCTTTGCGGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: SILYLLDPRNSH*FLPLKRSFAEL Trigger: CAGCTCCGCAAAGGACCTCTTCAATGGCAGAAATCAATGTGAATTTCTTGGATCCAGCAGGTAAAGAATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| 3UTR TCA 72 bp | ATAGAAATCCATTTTAAGATGGTGTGCATAAAGGCTTaGTGGATGTTCATCGTCTGTCTAAAGGAGAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: IEIHFKMVCIKA*WMFIVCLKENE Trigger: TTCATTCTCCTTTAGACAGACGATGAACATCCATCAAGCCTTTATGCACACCATCTTAAAATGGATTTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAAACCATCACATCTGCCTaGGCCTTCCGTACAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: AAVSGMRACSDGARLDDQTITSA*AFRTAA Trigger: CGCAGCTGTACGGAAGGCCCAGGCAGATGTGATGGT...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAATCAGGCCAACATAGGTaGCACCTCCAGAGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVSGMRACSDGARLDDQSGQHR*HLQRAP Trigger: TGGAGCTCTCTGGAGGTGGCACCTATGTTGGCCTGA...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGTGACCTTAGCAGAGAGGATGACTACTCCTCTCAAAAGGACCTCGCTAAAACCTCTGCGGGGTCATaGCCCTGCTCCTGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGDLSREDDYSSQKDLAKTSAGS*PCSWVS Trigger: GGAAACCCAGGAGCAGGGTCATGACCCCGCAGAGGT...TTTAGCGAGGTCCTTTTGAGAGGAGTAGTCATCCTCTCTGCTAAGGTCACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055006.12 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAATTTGTTCCTGCGGGCTaGATCCAGGGAGACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AAVSGMRACSDGARLDDQFVPAG*IQGDST Trigger: AGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAA...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAAACAGCACAGTGTTGCTaGTGGCGGCCAGCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKETAQCC*WRPASP Trigger: TGGAGAGGCTGGCCGCCATCAGCAACACTGTGCTGT...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAAGGTGGGCAGGGCAGGTaGGTAGATCCTGGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKEGGQGR*VDPGPL Trigger: CAAAGGACCAGGATCTACGCACCTGCCCTGCCCACC...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTTGTGCCTTAGAGTTTACCAAAGGGCTGTGGTaGGCAGGGCAGGTGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRRPSLEDVRRGFCALEFTKGLW*AGQVRR Trigger: TCTACGCACCTGCCCTGCCCACCACAGCCCTTTGGT...AAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR TCA 90 bp | AACCAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTAGAGGGGCCAAAGGGTaGGCAGTGACCCCGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQTLKRNAQDCGLCGLVCRGAKG*AVTPVR Trigger: TCTGACCGGGGTCACTGCTCACCCTTTGGCCCCTCT...ACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055006.12 |
||
| CDS-3UTR TCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTACAGCACAGTGTTGCTaGTGGCGGCCAGCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSLSNSGPGFRLERRPLTTAQCC*WRPASP Trigger: TGGAGAGGCTGGCCGCCATCAGCAACACTGTGCTGT...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAACCACCTCTTTGTTCCTaGGGGCTGCATCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKEPPLCS*GLHPGR Trigger: TCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGG...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTTGTGCCTTAGAGTTTCCACCTCTTTGTTCCTaGGGGCTGCATCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRRPSLEDVRRGFCALEFPPLCS*GLHPGR Trigger: TCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGG...AAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGACCTTAGCAGAGAGGATGACTACTCCTCTCAAAAGGACCTCGCTAAAGAAGACCATCACATCTaGCTGGGCCTTCCGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGDLSREDDYSSQKDLAKEDHHI*LGLPYS Trigger: GCTGTACGGAAGGCCCAGGCAGATGTGATGGTCTTC...TTTAGCGAGGTCCTTTTGAGAGGAGTAGTCATCCTCTCTGCTAAGGTCACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAAGTTGACTTGATTCAGTaGAGCCTGTTCTTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAVSGMRACSDGARLDDQVDLIQ*SLFFLL Trigger: GAGGAGAAAGAACAGGCTGCACTGAATCAAGTCAAC...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTGGTGAAACCAAAGGGCTGTaGTGGGCAGGGCAGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTLKRNAQDCGLCGLVCGETKGL*WAGQVR Trigger: ACGCACCTGCCCTGCCCACCACAGCCCTTTGGTTTC...ACCACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAGATGTCTTCATAGAGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTACCTCTGCGGGGTCATaGCCCTGCTCCTGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MSDVFIEPDLPVVSLSTFTSAGS*PCSWVS Trigger: GGAAACCCAGGAGCAGGGTCATGACCCCGCAGAGGT...AAATGTGGACAGAGAAACAACCGGTAAGTCAGGCTCTATGAAGACATCTGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTTGTGCCTTAGAGTTTCACTGCTGGTGCGTGTaGCAGAAGGAAACCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRRPSLEDVRRGFCALEFHCWCV*QKETKG Trigger: CCCTTTGGTTTCCTTCTGCCACACGCACCAGCAGTG...AAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTACCATCACATCTGCCTaGGCCTTCCGTACAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSLSNSGPGFRLERRPLTTITSA*AFRTAA Trigger: CGCAGCTGTACGGAAGGCCCAGGCAGATGTGATGGT...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTTGTGCCTTAGAGTTTGTTAGCTGGTGGCTGTaGAGTTTGCTGTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DRRPSLEDVRRGFCALEFVSWWL*SLLFSW Trigger: CCAGGAGAACAGCAAACTGCACAGCCACCAGCTAAC...AAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAACAGATACACTGCTGGTaGGTGTGGCAGAAGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKEQIHCW*VWQKET Trigger: GGTTTCCTTCTGCCACACGCACCAGCAGTGTATCTG...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACACCATCACATCTGCCTaGGCCTTCCGTACAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLTYRLFLCPHFQSRVYYTITSA*AFRTAA Trigger: CGCAGCTGTACGGAAGGCCCAGGCAGATGTGATGGT...GTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAAGTCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR TCA 90 bp | CATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGACATTGGGAATGACACAGAGAGGGGCCAAAGGGTaGGCAGTGACCCCGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFQSRVYYLNVWTLGMTQRGAKG*AVTPVR Trigger: TCTGACCGGGGTCACTGCTCACCCTTTGGCCCCTCT...CTGTGTCATTCCCAATGTCCAAACATTTAGGTAATAAACTCGGGACTGAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAAAAGTCACACAAGATCTaGTCCTCTTCACCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKEKSHKI*SSSPGA Trigger: GGCTCCTGGTGAAGAGGATCAGATCTTGTGTGACTT...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055006.12 |
||
| CDS-3UTR GCA 90 bp | CTGACTTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTACCACCTCTTTGTTCCTaGGGGCTGCATCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTYRLFLCPHFQSRVYYLPPLCS*GLHPGR Trigger: TCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGG...TAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAAGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | ATAGAGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTAGAAGACCATCACATCTaGCTGGGCCTTCCGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IEPDLPVVSLSTFSVPSLEDHHI*LGLPYS Trigger: GCTGTACGGAAGGCCCAGGCAGATGTGATGGTCTTC...TAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAAGTCAGGCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTGCGAAGGTACCTGTGTaGTGTGTCTGGGTCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: HSLSNSGPGFRLERRPLTAKVPV*CVWVKR Trigger: ACGTTTGACCCAGACACAGCACACAGGTACCTTCGC...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | CCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGACCAAAGGGCTGTGGTaGGCAGGGCAGGTGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVVSLSTFSVPSLLPKCLTKGLW*AGQVRR Trigger: TCTACGCACCTGCCCTGCCCACCACAGCCCTTTGGT...CAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR CCA 90 bp | CCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGAAACCAAAGGGCTGTaGTGGGCAGGGCAGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVVSLSTFSVPSLLPKCLETKGL*WAGQVR Trigger: ACGCACCTGCCCTGCCCACCACAGCCCTTTGGTTTC...CAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR CCA 90 bp | TTACCTAAATGTTTGGACATTGGGAATGACACAGGTTTGGGTCTAGCTGCCCAACACTGCTGGTGCGTGTaGCAGAAGGAAACCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPKCLDIGNDTGLGLAAQHCWCV*QKETKG Trigger: CCCTTTGGTTTCCTTCTGCCACACGCACCAGCAGTG...TTGGGCAGCTAGACCCAAACCTGTGTCATTCCCAATGTCCAAACATTTAGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR TCA 90 bp | CTGGGTGACCTTAGCAGAGAGGATGACTACTCCTCTCAAAAGGACCTCGCTAAATTGATGCTGTTGACTTaGTTCAGTGCAGCCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGDLSREDDYSSQKDLAKLMLLT*FSAACS Trigger: AGAACAGGCTGCACTGAATCAAGTCAACAGCATCAA...TTTAGCGAGGTCCTTTTGAGAGGAGTAGTCATCCTCTCTGCTAAGGTCACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGGGTGGGCAGGGCAGGTaGGTAGATCCTGGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LESSQISLKQHTVETGSRGGQGR*VDPGPL Trigger: CAAAGGACCAGGATCTACGCACCTGCCCTGCCCACC...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGACGGTGGGCAGGGCAGGTaGGTAGATCCTGGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVSLSTFSVPSLLPKCLDGGQGR*VDPGPL Trigger: CAAAGGACCAGGATCTACGCACCTGCCCTGCCCACC...GTCCAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | TTACCTAAATGTTTGGACATTGGGAATGACACAGGTTTGGGTCTAGCTGCCCAACAGATACACTGCTGGTaGGTGTGGCAGAAGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LPKCLDIGNDTGLGLAAQQIHCW*VWQKET Trigger: GGTTTCCTTCTGCCACACGCACCAGCAGTGTATCTG...TTGGGCAGCTAGACCCAAACCTGTGTCATTCCCAATGTCCAAACATTTAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | CAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTGGTATCTCGAGGCTCCTGTaGTCCAGATGGGTTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QTLKRNAQDCGLCGLVCGISRLL*SRWVLM Trigger: CATCAAAACCCATCTGGAGCACAGGAGCCTCGAGAT...ACCACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGACCAAAGGGCTGTGGTaGGCAGGGCAGGTGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LESSQISLKQHTVETGSRTKGLW*AGQVRR Trigger: TCTACGCACCTGCCCTGCCCACCACAGCCCTTTGGT...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGTGCAGTCTTGTTATGGTTTGAAGATCCCTAGTTGGAAATTCTGGATGCACTGCTGGTGCGTGTaGCAGAAGGAAACCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPVQSCYGLKIPSWKFWMHCWCV*QKETKG Trigger: CCCTTTGGTTTCCTTCTGCCACACGCACCAGCAGTG...CATCCAGAATTTCCAACTAGGGATCTTCAAACCATAACAAGACTGCACAGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAACTCCTGTGCTCCAGATaGGTTTTGATGCTGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKELLCSR*VLMLLT Trigger: AGTCAACAGCATCAAAACCCATCTGGAGCACAGGAG...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGACAACAGCACAGTGTTGCTaGTGGCGGCCAGCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLCPHFQSRVYYLNVWTTAQCC*WRPASP Trigger: TGGAGAGGCTGGCCGCCATCAGCAACACTGTGCTGT...TGTCCAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAAATGTCACAGGCATATTaGAGAAACTCATCCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKEMSQAY*RNSSRV Trigger: AACCCGGGATGAGTTTCTTCAATATGCCTGTGACAT...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGTGCAGTCTTGTTATGGTTTGAAGATCCCTAGTTGGAAATTCTGGATGTCACTGCCCTTACTCTaGTGGCCCCAAGACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPVQSCYGLKIPSWKFWMSLPLL*WPQDRS Trigger: ACTTCTGTCTTGGGGCCAGCAGAGTAAGGGCAGTGA...CATCCAGAATTTCCAACTAGGGATCTTCAAACCATAACAAGACTGCACAGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055006.12 |
||
| CDS-3UTR GCA 90 bp | CTGACTTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTATTTGTTCCTGCGGGCTaGATCCAGGGAGACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LTYRLFLCPHFQSRVYYLFVPAG*IQGDST Trigger: AGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAA...TAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACTCGAGGTCCTATACTTaGGCTGGACAATGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLTYRLFLCPHFQSRVYYSRSYT*AGQWQT Trigger: TGTCTGCCATTGTCCAGCGCAAGTATAGGACCTCGA...GTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAAGTCAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | AACCAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTTCGAGGTCCTATACTTaGGCTGGACAATGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NQTLKRNAQDCGLCGLVCSRSYT*AGQWQT Trigger: TGTCTGCCATTGTCCAGCGCAAGTATAGGACCTCGA...ACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTTGTGCCTTAGAGTTTAGCTATTTCCAGAAATaGAGCTGTTCCGTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRRPSLEDVRRGFCALEFSYFQK*SCSVLP Trigger: GGGAAGAACGGAACAGCTGCATTTCTGGAAATAGCT...AAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAACCGGCTCTGAGAACTTaGAGTCAAACTTGTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKEPALRT*SQTCES Trigger: TGATTCACAAGTTTGACTGCAAGTTCTCAGAGCCGG...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAAGACTTATGGTTAGCTTaGAGCCTGGCAATGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PGQLGPRCEALSQIKRKEDLWLA*SLAMAF Trigger: AAATGCCATTGCCAGGCTCCAAGCTAACCATAAGTC...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTCTCCTGTGCTCCAGATaGGTTTTGATGCTGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: HSLSNSGPGFRLERRPLTLLCSR*VLMLLT Trigger: AGTCAACAGCATCAAAACCCATCTGGAGCACAGGAG...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| 3UTR CAA 72 bp | CAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTaGTGCCTTAGAGTTTCTGCATTCATGCAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QETLTRRCEERL*CLRVSAFMQEL Trigger: CAGTTCTTGCATGAATGCAGAAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR TCA 90 bp | CAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTGGTTTGATGCTGTTGACTTaGTTCAGTGCAGCCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLKRNAQDCGLCGLVCGLMLLT*FSAACS Trigger: AGAACAGGCTGCACTGAATCAAGTCAACAGCATCAA...ACCACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTCACAGTAGTTCACCATaGAGGTCAGACAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSLSNSGPGFRLERRPLTHSSSP*RSDRIS Trigger: TGAAATCCTGTCTGACCTGCATGGTGAACTACTGTG...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055006.12 |
||
| CDS-3UTR GCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTGTTGACTTGATTCAGTaGAGCCTGTTCTTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLSNSGPGFRLERRPLTVDLIQ*SLFFLL Trigger: GAGGAGAAAGAACAGGCTGCACTGAATCAAGTCAAC...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGTGCAGTCTTGTTATGGTTTGAAGATCCCTAGTTGGAAATTCTGGATGATCTCGAGGCTCCTGTaGTCCAGATGGGTTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IPVQSCYGLKIPSWKFWMISRLL*SRWVLM Trigger: CATCAAAACCCATCTGGAGCACAGGAGCCTCGAGAT...CATCCAGAATTTCCAACTAGGGATCTTCAAACCATAACAAGACTGCACAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGTGCAGTCTTGTTATGGTTTGAAGATCCCTAGTTGGAAATTCTGGATGTCGAGGTCCTATACTTaGGCTGGACAATGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: IPVQSCYGLKIPSWKFWMSRSYT*AGQWQT Trigger: TGTCTGCCATTGTCCAGCGCAAGTATAGGACCTCGA...CATCCAGAATTTCCAACTAGGGATCTTCAAACCATAACAAGACTGCACAGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | TTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTCAGGCCAACATAGGTaGCACCTCCAGAGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVVSLSTFSVPSLLPKCSGQHR*HLQRAP Trigger: TGGAGCTCTCTGGAGGTGGCACCTATGTTGGCCTGA...ACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGACTCACTGCCCTTACTCTaGTGGCCCCAAGACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLSTFSVPSLLPKCLDSLPLL*WPQDRS Trigger: ACTTCTGTCTTGGGGCCAGCAGAGTAAGGGCAGTGA...GTCCAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGTTTGTTCCTGCGGGCTaGATCCAGGGAGACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LESSQISLKQHTVETGSRFVPAG*IQGDST Trigger: AGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAA...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAACATTTACCCCATAAAGATGAACTAACAAAGAGAAAGCACTCCAAACGCGAAGACCATCACATCTaGCTGGGCCTTCCGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKHLPHKDELTKRKHSKREDHHI*LGLPYS Trigger: GCTGTACGGAAGGCCCAGGCAGATGTGATGGTCTTC...GCGTTTGGAGTGCTTTCTCTTTGTTAGTTCATCTTTATGGGGTAAATGTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | TTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTGCGAAGGTACCTGTGTaGTGTGTCTGGGTCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: LPVVSLSTFSVPSLLPKCAKVPV*CVWVKR Trigger: ACGTTTGACCCAGACACAGCACACAGGTACCTTCGC...ACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGGCGAAGGTACCTGTGTaGTGTGTCTGGGTCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: LESSQISLKQHTVETGSRAKVPV*CVWVKR Trigger: ACGTTTGACCCAGACACAGCACACAGGTACCTTCGC...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | AACCAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTCCGGCTCTGAGAACTTaGAGTCAAACTTGTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: NQTLKRNAQDCGLCGLVCPALRT*SQTCES Trigger: TGATTCACAAGTTTGACTGCAAGTTCTCAGAGCCGG...ACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | AACCAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTGACTTATGGTTAGCTTaGAGCCTGGCAATGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NQTLKRNAQDCGLCGLVCDLWLA*SLAMAF Trigger: AAATGCCATTGCCAGGCTCCAAGCTAACCATAAGTC...ACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTTGTGCCTTAGAGTTTCATATTCCTCTTCCCTaGAAAATTCCTGGAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DRRPSLEDVRRGFCALEFHIPLP*KIPGAF Trigger: AAAAGCTCCAGGAATTTTCCAGGGAAGAGGAATATG...AAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTGGTGGAAAGGATTCCTCCTaGGAAGTTTACATAGATACC | + |
|
Preference number: 4 (lower is better) Translates to: QTLKRNAQDCGLCGLVCGGKDSS*EVYIDT Trigger: GGTATCTATGTAAACTTCCCAGGAGGAATCCTTTCC...ACCACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| 3UTR CAA 72 bp | AAGAAAGGGCAGGCCAGGGAAACACGCCTTTCTCTTTaGAAGAGTATTCTTTACCTGCTGGATCCAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKGQARETRLSL*KSILYLLDPRN Trigger: ATTTCTTGGATCCAGCAGGTAAAGAATACTCTTCAAAAGAGAAAGGCGTGTTTCCCTGGCCTGCCCTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAGATGTCTTCATAGAGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTATGTCACAGGCATATTaGAGAAACTCATCCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSDVFIEPDLPVVSLSTFMSQAY*RNSSRV Trigger: AACCCGGGATGAGTTTCTTCAATATGCCTGTGACAT...AAATGTGGACAGAGAAACAACCGGTAAGTCAGGCTCTATGAAGACATCTGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR TCA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTTTGCAGTCAAACTTGTaGATCAGAGTCATAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HSLSNSGPGFRLERRPLTLQSNL*IRVIAS Trigger: TGATGCTATGACTCTGATTCACAAGTTTGACTGCAA...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCAGATGTCTTCATAGAGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTCACAGTAGTTCACCATaGAGGTCAGACAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSDVFIEPDLPVVSLSTFHSSSP*RSDRIS Trigger: TGAAATCCTGTCTGACCTGCATGGTGAACTACTGTG...AAATGTGGACAGAGAAACAACCGGTAAGTCAGGCTCTATGAAGACATCTGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGTGCAGTCTTGTTATGGTTTGAAGATCCCTAGTTGGAAATTCTGGATGAGCTATTTCCAGAAATaGAGCTGTTCCGTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPVQSCYGLKIPSWKFWMSYFQK*SCSVLP Trigger: GGGAAGAACGGAACAGCTGCATTTCTGGAAATAGCT...CATCCAGAATTTCCAACTAGGGATCTTCAAACCATAACAAGACTGCACAGGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTGGTCATATTCCTCTTCCCTaGAAAATTCCTGGAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLKRNAQDCGLCGLVCGHIPLP*KIPGAF Trigger: AAAAGCTCCAGGAATTTTCCAGGGAAGAGGAATATG...ACCACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| 3UTR CAA 72 bp | GAGTATTCTTTACCTGCTGGATCCAAGAAATTCACATaGATTTCTGCCATTGAAGAGGTCCTTTGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EYSLPAGSKKFT*ISAIEEVLCGA Trigger: AGCTCCGCAAAGGACCTCTTCAATGGCAGAAATCAATGTGAATTTCTTGGATCCAGCAGGTAAAGAATACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR TCA 90 bp | AACCAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTTTGCAGTCAAACTTGTaGATCAGAGTCATAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NQTLKRNAQDCGLCGLVCLQSNL*IRVIAS Trigger: TGATGCTATGACTCTGATTCACAAGTTTGACTGCAA...ACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR GCA 90 bp | CCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGTTGACTTGATTCAGTaGAGCCTGTTCTTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVVSLSTFSVPSLLPKCLVDLIQ*SLFFLL Trigger: GAGGAGAAAGAACAGGCTGCACTGAATCAAGTCAAC...CAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGACAATCTCGAGGCTCCTGTaGTCCAGATGGGTTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFLCPHFQSRVYYLNVWTISRLL*SRWVLM Trigger: CATCAAAACCCATCTGGAGCACAGGAGCCTCGAGAT...TGTCCAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR CCA 90 bp | TTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTCTCCTGTGCTCCAGATaGGTTTTGATGCTGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LPVVSLSTFSVPSLLPKCLLCSR*VLMLLT Trigger: AGTCAACAGCATCAAAACCCATCTGGAGCACAGGAG...ACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR TCA 90 bp | GTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTTTGGACTTGATGCTGTTGACTTaGTTCAGTGCAGCCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLSTFSVPSLLPKCLDLMLLT*FSAACS Trigger: AGAACAGGCTGCACTGAATCAAGTCAACAGCATCAA...GTCCAAACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR GCA 90 bp | TTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTAGCTATTTCCAGAAATaGAGCTGTTCCGTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPVVSLSTFSVPSLLPKCSYFQK*SCSVLP Trigger: GGGAAGAACGGAACAGCTGCATTTCTGGAAATAGCT...ACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR CCA 90 bp | TTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTGACTTATGGTTAGCTTaGAGCCTGGCAATGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPVVSLSTFSVPSLLPKCDLWLA*SLAMAF Trigger: AAATGCCATTGCCAGGCTCCAAGCTAACCATAAGTC...ACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| CDS-3UTR CCA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGGGAAAGGATTCCTCCTaGGAAGTTTACATAGATACC | + |
|
Preference number: 4 (lower is better) Translates to: LESSQISLKQHTVETGSRGKDSS*EVYIDT Trigger: GGTATCTATGTAAACTTCCCAGGAGGAATCCTTTCC...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS-3UTR CCA 90 bp | TTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTACCTAAATGTCATATTCCTCTTCCCTaGAAAATTCCTGGAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPVVSLSTFSVPSLLPKCHIPLP*KIPGAF Trigger: AAAAGCTCCAGGAATTTTCCAGGGAAGAGGAATATG...ACATTTAGGTAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
||
| 3UTR CAA 72 bp | ATAGTCTTTGGTATAGGGATAAGTATATGTTCTTACTaGGTTATTACGACACTGAAAAGCCACACTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: IVFGIGISICSY*VITTLKSHTEF Trigger: GAATTCAGTGTGGCTTTTCAGTGTCGTAATAACCAAGTAAGAACATATACTTATCCCTATACCAAAGACTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS CCA 90 bp | GGGCAGGTGCGTAGATCCTGGTCCTTTGCGGGTTCGGTTAGCTGGTaGCTGTGCAGTTTGCTGTTCTCCTGGTGTGGCCGCAGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQVRRSWSFAGSVSW*LCSLLFSWCGRRCS Trigger: GGAGCACCTGCGGCCACACCAGGAGAACAGCAAACTGCACAGCCACCAGCTAACCGAACCCGCAAAGGACCAGGATCTACGCACCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
||
| CDS CCA 90 bp | GCAGGGCAGGTGCGTAGATCCTGGTCCTTTGCGGGTTCGGTTAGCTaGTGGCTGTGCAGTTTGCTGTTCTCCTGGTGTGGCCGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGQVRRSWSFAGSVS*WLCSLLFSWCGRRC Trigger: GCACCTGCGGCCACACCAGGAGAACAGCAAACTGCACAGCCACCAGCTAACCGAACCCGCAAAGGACCAGGATCTACGCACCTGCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
||
| CDS GCA 90 bp | GTGCGTAGATCCTGGTCCTTTGCGGGTTCGGTTAGCTGGTGGCTGTaGAGTTTGCTGTTCTCCTGGTGTGGCCGCAGGTGCTCCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VRRSWSFAGSVSWWL*SLLFSWCGRRCSSQ Trigger: CTGTGAGGAGCACCTGCGGCCACACCAGGAGAACAGCAAACTGCACAGCCACCAGCTAACCGAACCCGCAAAGGACCAGGATCTACGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
||
| CDS GCA 90 bp | GTCCAACTGCATACACCGAAGGTCCACCTCTTTGTTCCTGCGGGCTaGATCCAGGGAGACAGTACTGTCGCCTCTGTGTTCACCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQLHTPKVHLFVPAG*IQGDSTVASVFTLP Trigger: GGGGAGGGTGAACACAGAGGCGACAGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCGGTGTATGCAGTTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
||
| CDS CCA 90 bp | AAGGAAACCAAAGGGCTGTGGTGGGCAGGGCAGGTGCGTAGATCCTaGTCCTTTGCGGGTTCGGTTAGCTGGTGGCTGTGCAGTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KETKGLWWAGQVRRS*SFAGSVSWWLCSLL Trigger: CAGCAAACTGCACAGCCACCAGCTAACCGAACCCGCAAAGGACCAGGATCTACGCACCTGCCCTGCCCACCACAGCCCTTTGGTTTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
||
| CDS CCA 90 bp | ATACACTGCTGGTGCGTGTGGCAGAAGGAAACCAAAGGGCTGTGGTaGGCAGGGCAGGTGCGTAGATCCTGGTCCTTTGCGGGTTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IHCWCVWQKETKGLW*AGQVRRSWSFAGSV Trigger: AACCGAACCCGCAAAGGACCAGGATCTACGCACCTGCCCTGCCCACCACAGCCCTTTGGTTTCCTTCTGCCACACGCACCAGCAGTGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAACGAAGGTCCACCTCTTaGTTCCTGCGGGCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AAVSGMRACSDGARLDDQRRSTS*FLRAAS Trigger: GGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCG...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
||
| CDS GCA 90 bp | GCTCCAGGTCCAACTGCATACACCGAAGGTCCACCTCTTTGTTCCTaGGGGCTGCATCCAGGGAGACAGTACTGTCGCCTCTGTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: APGPTAYTEGPPLCS*GLHPGRQYCRLCVH Trigger: GTGAACACAGAGGCGACAGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCGGTGTATGCAGTTGGACCTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
||
| CDS CCA 90 bp | AGGGAGACAGTACTGTCGCCTCTGTGTTCACCCTCCCCGCATTCCTaGCAGATACACTGCTGGTGCGTGTGGCAGAAGGAAACCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RETVLSPLCSPSPHS*QIHCWCVWQKETKG Trigger: CCCTTTGGTTTCCTTCTGCCACACGCACCAGCAGTGTATCTGCCAGGAATGCGGGGAGGGTGAACACAGAGGCGACAGTACTGTCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS-3UTR CAA 90 bp | GCTGCTGTGTCAGGGATGAGGGCATGCTCAGATGGTGCAAGGCTGGATGACCAAGTGTCCTCTGTCTTCTaGAGCTTGCAGTACTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAVSGMRACSDGARLDDQVSSVF*SLQYSS Trigger: GGAGGAGTACTGCAAGCTCAAGAAGACAGAGGACAC...TTGGTCATCCAGCCTTGCACCATCTGAGCATGCCCTCATCCCTGACACAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS GCA 90 bp | GTGCTCCTCACAGTAGTTCACCATGCAGGTCAGACAGGATTTCACTaGCCTTACTCTGCTGGCCCCAAGACAGAAGTCACACAAGATCTG | + |
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Preference number: 5 (lower is better) Translates to: VLLTVVHHAGQTGFH*PYSAGPKTEVTQDL Trigger: CAGATCTTGTGTGACTTCTGTCTTGGGGCCAGCAGAGTAAGGGCAGTGAAATCCTGTCTGACCTGCATGGTGAACTACTGTGAGGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 |
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| CDS-3UTR CAA 90 bp | CATAGTCTCAGTAACTCTGGACCAGGATTTAGACTTGAGAGAAGGCCGTTGACTCTGAAGGGGCTGACCTaGAGCGGGGTCTCTGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: HSLSNSGPGFRLERRPLTLKGLT*SGVSVS Trigger: TGACACAGAGACCCCGCTCAAGGTCAGCCCCTTCAG...AGTCAACGGCCTTCTCTCAAGTCTAAATCCTGGTCCAGAGTTACTGAGACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS CCA 90 bp | AGTTCACCATGCAGGTCAGACAGGATTTCACTGCCCTTACTCTGCTaGCCCCAAGACAGAAGTCACACAAGATCTGATCCTCTTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: SSPCRSDRISLPLLC*PQDRSHTRSDPLHQ Trigger: CTGGTGAAGAGGATCAGATCTTGTGTGACTTCTGTCTTGGGGCCAGCAGAGTAAGGGCAGTGAAATCCTGTCTGACCTGCATGGTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 |
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| CDS-3UTR CAA 90 bp | TTACCTAAATGTTTGGACATTGGGAATGACACAGGTTTGGGTCTAGCTGCCCAACGAAGGTCCACCTCTTaGTTCCTGCGGGCTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: LPKCLDIGNDTGLGLAAQRRSTS*FLRAAS Trigger: GGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCG...TTGGGCAGCTAGACCCAAACCTGTGTCATTCCCAATGTCCAAACATTTAGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
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| CDS TCA 90 bp | ATCTCGAGGCTCCTGTGCTCCAGATGGGTTTTGATGCTGTTGACTTaGTTCAGTGCAGCCTGTTCTTTCTCCTCTAGGAAGACCATCACA | + |
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Preference number: 5 (lower is better) Translates to: ISRLLCSRWVLMLLT*FSAACSFSSRKTIT Trigger: TGTGATGGTCTTCCTAGAGGAGAAAGAACAGGCTGCACTGAATCAAGTCAACAGCATCAAAACCCATCTGGAGCACAGGAGCCTCGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS-3UTR CAA 90 bp | CAAACTCTTAAGAGGAATGCTCAAGACTGTGGGCTATGCGGTTTAGTGTGTGGTGTGTCCTCTGTCTTCTaGAGCTTGCAGTACTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: QTLKRNAQDCGLCGLVCGVSSVF*SLQYSS Trigger: GGAGGAGTACTGCAAGCTCAAGAAGACAGAGGACAC...ACCACACACTAAACCGCATAGCCCACAGTCTTGAGCATTCCTCTTAAGAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS-3UTR CAA 90 bp | GACAGGAGACCCTCACTAGAAGATGTGAGGAGAGGCTTTTGTGCCTTAGAGTTTGAATCTGTGATGACCTaGCGGATGCCTGAGAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: DRRPSLEDVRRGFCALEFESVMT*RMPESL Trigger: CAAACTCTCAGGCATCCGCAAGGTCATCACAGATTC...AAACTCTAAGGCACAAAAGCCTCTCCTCACATCTTCTAGTGAGGGTCTCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS-3UTR CAA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGCGAAGGTCCACCTCTTaGTTCCTGCGGGCTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: LESSQISLKQHTVETGSRRRSTS*FLRAAS Trigger: GGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCG...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCCAGCTTGGGCCACGTTGTGAAGCCCTATCCCAAATAAAAAGAAAAGAAAGACTTATGGTTAGCTaGGAGCCTGGCAATGGCATT | + |
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Preference number: 5 (lower is better) Translates to: PGQLGPRCEALSQIKRKERLMVS*EPGNGI Trigger: AATGCCATTGCCAGGCTCCAAGCTAACCATAAGTCT...TTCTTTTCTTTTTATTTGGGATAGGGCTTCACAACGTGGCCCAAGCTGGCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTAGTGTCCTCTGTCTTCTaGAGCTTGCAGTACTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: IEPDLPVVSLSTFSVPSLVSSVF*SLQYSS Trigger: GGAGGAGTACTGCAAGCTCAAGAAGACAGAGGACAC...TAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAAGTCAGGCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
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| CDS-3UTR CAA 90 bp | ATAGAGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTCGAGGTCCTATACTaGCGCTGGACAATGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: IEPDLPVVSLSTFSVPSLFEVLY*RWTMAD Trigger: GTCTGCCATTGTCCAGCGCAAGTATAGGACCTCGAA...TAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAAGTCAGGCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
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| CDS-3UTR CAA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGCTGAAGGGGCTGACCTaGAGCGGGGTCTCTGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LESSQISLKQHTVETGSRLKGLT*SGVSVS Trigger: TGACACAGAGACCCCGCTCAAGGTCAGCCCCTTCAG...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS-3UTR CAA 90 bp | ATCCCTGTGCAGTCTTGTTATGGTTTGAAGATCCCTAGTTGGAAATTCTGGATGTTCGAGGTCCTATACTaGCGCTGGACAATGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: IPVQSCYGLKIPSWKFWMFEVLY*RWTMAD Trigger: GTCTGCCATTGTCCAGCGCAAGTATAGGACCTCGAA...CATCCAGAATTTCCAACTAGGGATCTTCAAACCATAACAAGACTGCACAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS-3UTR CAA 90 bp | GAGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTTCAGTCCCGAGTTTATTAAGACTTATGGTTAGCTaGGAGCCTGGCAATGGCATT | + |
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Preference number: 5 (lower is better) Translates to: EPDLPVVSLSTFSVPSLLRLMVS*EPGNGI Trigger: AATGCCATTGCCAGGCTCCAAGCTAACCATAAGTCT...TAATAAACTCGGGACTGAAAATGTGGACAGAGAAACAACCGGTAAGTCAGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
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| CDS-3UTR CAA 90 bp | ATGTCAGATGTCTTCATAGAGCCTGACTTACCGGTTGTTTCTCTGTCCACATTTGAATCTGTGATGACCTaGCGGATGCCTGAGAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: MSDVFIEPDLPVVSLSTFESVMT*RMPESL Trigger: CAAACTCTCAGGCATCCGCAAGGTCATCACAGATTC...AAATGTGGACAGAGAAACAACCGGTAAGTCAGGCTCTATGAAGACATCTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072639.10 |
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| CDS-3UTR CAA 90 bp | TTAGAATCAAGTCAAATAAGTCTAAAGCAACACACAGTTGAGACAGGATCACGGGAATCTGTGATGACCTaGCGGATGCCTGAGAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: LESSQISLKQHTVETGSRESVMT*RMPESL Trigger: CAAACTCTCAGGCATCCGCAAGGTCATCACAGATTC...CCGTGATCCTGTCTCAACTGTGTGTTGCTTTAGACTTATTTGACTTGATTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000108703.2 |
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| CDS TCA 72 bp | TCCTCTTCACCAGGAGCCCCGACCTCTGCGGGGTCATaGCCCTGCTCCTGGGTTTCCTCACCTGACTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSPGAPTSAGS*PCSWVSSPDLL Trigger: CAGCAAGTCAGGTGAGGAAACCCAGGAGCAGGGTCATGACCCCGCAGAGGTCGGGGCTCCTGGTGAAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 |
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| CDS GCA 72 bp | TCCTGGTCCTTTGCGGGTTCGGTTAGCTGGTGGCTGTaGAGTTTGCTGTTCTCCTGGTGTGGCCGCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SWSFAGSVSWWL*SLLFSWCGRRC Trigger: GCACCTGCGGCCACACCAGGAGAACAGCAAACTGCACAGCCACCAGCTAACCGAACCCGCAAAGGACCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS TCA 72 bp | GAGAGGGTCCGCATCTTCTTTTTCTGCTGGGATAGCTaGCACAGGGTCTGGGCCGAGAGGGGCCAAAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: ERVRIFFFCWDS*HRVWAERGQRV Trigger: CACCCTTTGGCCCCTCTCGGCCCAGACCCTGTGTCAGCTATCCCAGCAGAAAAAGAAGATGCGGACCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 |
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| CDS TCA 72 bp | ACTCTGCTGGCCCCAAGACAGAAGTCACACAAGATCTaGTCCTCTTCACCAGGAGCCCCGACCTCTGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: TLLAPRQKSHKI*SSSPGAPTSAG Trigger: CCCCGCAGAGGTCGGGGCTCCTGGTGAAGAGGATCAGATCTTGTGTGACTTCTGTCTTGGGGCCAGCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 |
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| CDS CAA 72 bp | TCCTTTGCGGGTTCGGTTAGCTGGTGGCTGTGCAGTTaGCTGTTCTCCTGGTGTGGCCGCAGGTGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SFAGSVSWWLCS*LFSWCGRRCSS Trigger: TGAGGAGCACCTGCGGCCACACCAGGAGAACAGCAAACTGCACAGCCACCAGCTAACCGAACCCGCAAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS CAA 90 bp | AGCTTCTGCTCCAGGTCCAACTGCATACACCGAAGGTCCACCTCTTaGTTCCTGCGGGCTGCATCCAGGGAGACAGTACTGTCGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SFCSRSNCIHRRSTS*FLRAASRETVLSPL Trigger: CAGAGGCGACAGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCGGTGTATGCAGTTGGACCTGGAGCAGAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS GCA 72 bp | AGAAGGAAACCAAAGGGCTGTGGTGGGCAGGGCAGGTaGGTAGATCCTGGTCCTTTGCGGGTTCGGTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RRKPKGCGGQGR*VDPGPLRVRLA Trigger: AGCTAACCGAACCCGCAAAGGACCAGGATCTACGCACCTGCCCTGCCCACCACAGCCCTTTGGTTTCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS GCA 72 bp | CTGTGTTCACCCTCCCCGCATTCCTGGCAGATACACTaGTGGTGCGTGTGGCAGAAGGAAACCAAAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LCSPSPHSWQIH*WCVWQKETKGL Trigger: CAGCCCTTTGGTTTCCTTCTGCCACACGCACCAGCAGTGTATCTGCCAGGAATGCGGGGAGGGTGAACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS GCA 72 bp | CCAACTGCATACACCGAAGGTCCACCTCTTTGTTCCTaGGGGCTGCATCCAGGGAGACAGTACTGTCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PTAYTEGPPLCS*GLHPGRQYCRL Trigger: GAGGCGACAGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCGGTGTATGCAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS CCA 72 bp | TGTTCACCCTCCCCGCATTCCTGGCAGATACACTGCTaGTGCGTGTGGCAGAAGGAAACCAAAGGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: CSPSPHSWQIHC*CVWQKETKGLW Trigger: CCACAGCCCTTTGGTTTCCTTCTGCCACACGCACCAGCAGTGTATCTGCCAGGAATGCGGGGAGGGTGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS CCA 72 bp | GTACTGTCGCCTCTGTGTTCACCCTCCCCGCATTCCTaGCAGATACACTGCTGGTGCGTGTGGCAGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VLSPLCSPSPHS*QIHCWCVWQKE Trigger: TTCCTTCTGCCACACGCACCAGCAGTGTATCTGCCAGGAATGCGGGGAGGGTGAACACAGAGGCGACAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS TCA 72 bp | TGCGGGGTCATGACCCTGCTCCTGGGTTTCCTCACCTaGCTTGCTGAGAGGGTCCGCATCTTCTTTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CGVMTLLLGFLT*LAERVRIFFFC Trigger: GCAGAAAAAGAAGATGCGGACCCTCTCAGCAAGTCAGGTGAGGAAACCCAGGAGCAGGGTCATGACCCCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 |
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| CDS GCA 72 bp | CATACACCGAAGGTCCACCTCTTTGTTCCTGCGGGCTaGATCCAGGGAGACAGTACTGTCGCCTCTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: HTPKVHLFVPAG*IQGDSTVASVF Trigger: GAACACAGAGGCGACAGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCGGTGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS CAA 72 bp | TCCAGGTCCAACTGCATACACCGAAGGTCCACCTCTTaGTTCCTGCGGGCTGCATCCAGGGAGACAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: SRSNCIHRRSTS*FLRAASRETVL Trigger: CAGTACTGTCTCCCTGGATGCAGCCCGCAGGAACAAAGAGGTGGACCTTCGGTGTATGCAGTTGGACCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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| CDS GCA 72 bp | ACAGTAGTTCACCATGCAGGTCAGACAGGATTTCACTaGCCTTACTCTGCTGGCCCCAAGACAGAAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: TVVHHAGQTGFH*PYSAGPKTEVT Trigger: TGTGACTTCTGTCTTGGGGCCAGCAGAGTAAGGGCAGTGAAATCCTGTCTGACCTGCATGGTGAACTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 |
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| CDS TCA 72 bp | CTCCTGTGCTCCAGATGGGTTTTGATGCTGTTGACTTaGTTCAGTGCAGCCTGTTCTTTCTCCTCTAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLCSRWVLMLLT*FSAACSFSSRK Trigger: CTTCCTAGAGGAGAAAGAACAGGCTGCACTGAATCAAGTCAACAGCATCAAAACCCATCTGGAGCACAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055006.12 ENSMUST00000072639.10 ENSMUST00000108703.2 |
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