Pregenerated sensors for TRIM15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050747Ensembl transcript IDs: ENSMUST00000025329.13, ENSMUST00000173639.2, ENSMUST00000174195.8
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAAGTGGCAATCACAGAGAGGACTGGACTTGGCTTTGTGGTCTGTaGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCA | + |
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Preference number: 1 (lower is better) Translates to: SSGNHREDWTWLCGL*VQSDTSSPLQDGAA Trigger: TGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCAGTCCTCTCTGTGATTGCCACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
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| 3UTR CCA 90 bp | GGACAGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTTaGAGCAAAAGTATTATGGCCCAGACAATGTCCTTGGTGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: GQLCLLLHGRWALAS*SKSIMAQTMSLVLR Trigger: CCTGAGCACCAAGGACATTGTCTGGGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR GCA 90 bp | ACACCTGGTCACATCTACACTGCGCAGGACAGCTGTGTCTCCTTTTaGATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAAAGTATTATGG | + |
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Preference number: 1 (lower is better) Translates to: TPGHIYTAQDSCVSF*MAGGRWPVGAKVLW Trigger: CCATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCCTGCGCAGTGTAGATGTGACCAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR TCA 90 bp | GGAGCGGCATCCATCCAGGCTGCCTGCTTCCTAGGCTTCTGTTTCTaGAGGACAGGAGTGACAGCTGTGTCTGAGGATTTGTTTCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: GAASIQAACFLGFCF*RTGVTAVSEDLFLK Trigger: TTTAAGAAACAAATCCTCAGACACAGCTGTCACTCCTGTCCTTCAGAAACAGAAGCCTAGGAAGCAGGCAGCCTGGATGGATGCCGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
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| 3UTR TCA 90 bp | GGAACTTACTTTCCAGGTGGGATAGGGTTAGAAAAAGATGGTGACTaGAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCCCACACCTGG | + |
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Preference number: 1 (lower is better) Translates to: GTYFPGGIGLEKDGD*SLGVGHLQGLSHTW Trigger: CCAGGTGTGGGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCACCATCTTTTTCTAACCCTATCCCACCTGGAAAGTAAGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR TCA 90 bp | CAGAGGAACTTACTTTCCAGGTGGGATAGGGTTAGAAAAAGATGGTaGCTGAAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCCCACAC | + |
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Preference number: 1 (lower is better) Translates to: QRNLLSRWDRVRKRW*LKPWCGTFARSLPH Trigger: GTGTGGGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCACCATCTTTTTCTAACCCTATCCCACCTGGAAAGTAAGTTCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR TCA 90 bp | TTGAAGCTTTTACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTaGCTCATAGCTTTGCTGGTGTCTAGGACAATGCCTTCCTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LKLLQLFVCFPSKSH*LIALLVSRTMPSCL Trigger: CAGACAGGAAGGCATTGTCCTAGACACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGTAAAAGCTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGGGCATCCATCCAGGCTaGCTGCTTCCTAGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SRVTPLPRFRMERHPSRLGIHPG*LLPRLL Trigger: CAGAAGCCTAGGAAGCAGGCAGCCTGGATGGATGCC...CAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCAGCTCGTACCTGCTCTaGTTGAGTCTGGCATCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GLWVQSDTSSPLQDGAASSSYLL*LSLASF Trigger: GAAGGATGCCAGACTCAATCAGAGCAGGTACGAGCT...GGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGAGACAATGTCCTTGGTaGTCAGGTCCTGCCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: LCGLWVQSDTSSPLQDGARQCPW*SGPAIP Trigger: GGGGATGGCAGGACCTGAGCACCAAGGACATTGTCT...CGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR GCA 90 bp | TATTATGGCCCAGACAATGTCCTTGGTGCTCAGGTCCTGCCATCCCCTCACCCTGGCATCCATCCAGGCTaGCTGCTTCCTAGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YYGPDNVLGAQVLPSPHPGIHPG*LLPRLL Trigger: CAGAAGCCTAGGAAGCAGGCAGCCTGGATGGATGCC...AGGGTGAGGGGATGGCAGGACCTGAGCACCAAGGACATTGTCTGGGCCATAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025329.13 |
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| 3UTR-3UTR CCA 90 bp | GGACAGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAATGGCTTTGTGGTCTGTaGGTCCAGAGTGACACCTCT | + |
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Preference number: 2 (lower is better) Translates to: GQLCLLLHGRWALASWSKWLCGL*VQSDTS Trigger: AGAGGTGTCACTCTGGACCCACAGACCACAAAGCCA...TTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | AATGCTAGGGACAGAGCTGGGTTCCAAGGGTGCTGGTGTGTCTGCCGCATTTCCCAGCCGCCACTCAAGTaGCAATCACAGAGAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: NARDRAGFQGCWCVCRISQPPLK*QSQRGL Trigger: CAGTCCTCTCTGTGATTGCCACTTGAGTGGCGGCTG...GGAAATGCGGCAGACACACCAGCACCCTTGGAACCCAGCTCTGTCCCTAGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTTGCAAGGTCTCTCCCACACCTGGTCACATCTACACTGCGCAGGACAGCTCTTTTGCATGGCAGGTaGGCGCTGGCCAGTTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TFARSLPHLVTSTLRRTALLHGR*ALASWS Trigger: GCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAG...AGCTGTCCTGCGCAGTGTAGATGTGACCAGGTGTGGGAGAGACCTTGCAAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGCCTGCTTCCTGGTTTCGGATCTTCTTaGCAAGATCAGAGGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: HLFPASGWSGIHPGCLLPGFGSS*QDQRKW Trigger: CCATTTCCTCTGATCTTGTCAAGAAGATCCGAAACC...AGGAAGCAGGCAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| 3UTR-3UTR TCA 90 bp | TGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGCAGTACCTAGGAGCCTaGATCTGTCTCCAGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: WTWLCGLWVQSDTSSPLQQYLGA*ICLQML Trigger: CAGCATCTGGAGACAGATTCAGGCTCCTAGGTACTG...CTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCTTTCTTAAAGTGAAGTaGCCAGAACAGCAGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GLWVQSDTSSPLQDGAASFLKVK*PEQQQH Trigger: GTGCTGCTGCTGTTCTGGCCACTTCACTTTAAGAAA...GGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
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| 3UTR CAA 90 bp | CACACCTGGTCACATCTACACTGCGCAGGACAGCTGTGTCTCCTTTaGCATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAAAGTATTATG | + |
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Preference number: 2 (lower is better) Translates to: HTWSHLHCAGQLCLL*HGRWALASWSKSIM Trigger: CATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCCTGCGCAGTGTAGATGTGACCAGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR TCA 90 bp | TGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGCTAGGCTTCTGTTTCTaGAGGACAGGAGTGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: WTWLCGLWVQSDTSSPLQLGFCF*RTGVTA Trigger: AGCTGTCACTCCTGTCCTTCAGAAACAGAAGCCTAG...CTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACATTGGTGCTCAGGTCCTaGCATCCCCTCACCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LHSERSPCPGTGVKGLATLVLRS*HPLTLD Trigger: GTCCAGGGTGAGGGGATGGCAGGACCTGAGCACCAA...TGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCTTTAGGGTCCACCCAGAGTTGTTGATGAAGCCCTGTAGCATCTCCAGCTGGGCGCTGGCCAGTTaGAGCAAAAGTATTATGGCC | + |
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Preference number: 2 (lower is better) Translates to: RGFRVHPELLMKPCSISSWALAS*SKSIMA Trigger: GGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCA...GCTGGAGATGCTACAGGGCTTCATCAACAACTCTGGGTGGACCCTAAAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGGTGTGTCTGCCGCATTTCCCTGGCTCCACCTTAGTCTTTCAAAGGCAGTGGGCGCTGGCCAGTTaGAGCAAAAGTATTATGGCC | + |
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Preference number: 2 (lower is better) Translates to: VLVCLPHFPGSTLVFQRQWALAS*SKSIMA Trigger: GGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCA...CTGCCTTTGAAAGACTAAGGTGGAGCCAGGGAAATGCGGCAGACACACCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACACACTTTTGCATGGCAGGTaGGCGCTGGCCAGTTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PFREITVSRNRSERTCYTLLHGR*ALASWS Trigger: GCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAG...TGTGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGCCTGCTTCCTGAATCTGTCTCCAGATaGTGCATCAAGTTTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HLFPASGWSGIHPGCLLPESVSR*CIKFSE Trigger: TTCAGAAAACTTGATGCAGCATCTGGAGACAGATTC...AGGAAGCAGGCAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTCTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTCCCAGACAATGTCCTTaGTGCTCAGGTCCTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: LALHSERSPCPGTGVKGLPRQCP*CSGPAI Trigger: GATGGCAGGACCTGAGCACCAAGGACATTGTCTGGG...AAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAGAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGCAAGATCAGAGGAAATaGCCTCTGGGCTCACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: WTWLCGLWVQSDTSSPLQQDQRK*PLGSQK Trigger: CTTTTGTGAGCCCAGAGGCCATTTCCTCTGATCTTG...CTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCCTAAGTATTTTCCTGTaGAGGTTTCGGATCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GLWVQSDTSSPLQDGAASLSIFL*RFRIFL Trigger: CAAGAAGATCCGAAACCTCCACAGGAAAATACTTAG...GGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGACTGAAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCCCACACCTGGTTCTGAAGGACAGGAGTaGCAGCTGTGTCTGAGGATT | + |
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Preference number: 2 (lower is better) Translates to: MVTEALVWDICKVSPTPGSEGQE*QLCLRI Trigger: AATCCTCAGACACAGCTGTCACTCCTGTCCTTCAGA...ACCAGGTGTGGGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025329.13 |
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| 3UTR-3UTR GCA 90 bp | CTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACAAGACAATGTCCTTGGTaGTCAGGTCCTGCCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: LHSERSPCPGTGVKGLATRQCPW*SGPAIP Trigger: GGGGATGGCAGGACCTGAGCACCAAGGACATTGTCT...TGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGAACTTACTTTCCAGGTGGGATAGCCATCCCCTCACCCTaGACACTTAGGGGACCATTC | + |
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Preference number: 2 (lower is better) Translates to: LHLSLSKAGRGTYFPGGIAIPSP*TLRGPF Trigger: GAATGGTCCCCTAAGTGTCCAGGGTGAGGGGATGGC...TATCCCACCTGGAAAGTAAGTTCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGTGTCCTCATCATCTTTaGGAGGCTAAGTATTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SRVTPLPRFRMERHPSRLCPHHL*EAKYFP Trigger: AGGAAAATACTTAGCCTCCCAAAGATGATGAGGACA...CAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| 3UTR CAA 90 bp | TGTCCAGGAACAGGAGTGAAAGGACTTGCTACACAAGATTCCCATTaGAATGCTAGGGACAGAGCTGGGTTCCAAGGGTGCTGGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: CPGTGVKGLATQDSH*NARDRAGFQGCWCV Trigger: GACACACCAGCACCCTTGGAACCCAGCTCTGTCCCTAGCATTCAAATGGGAATCTTGTGTAGCAAGTCCTTTCACTCCTGTTCCTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGCCGCATTTCCCTGGCTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGAAGAAAAAGATGGTGACTaGAGCCTTGGTGTGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: CLPHFPGSTLVFQRQAEEEKDGD*SLGVGH Trigger: ATGTCCCACACCAAGGCTTCAGTCACCATCTTTTTC...TTCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAGCCAGGGAAATGCGGCAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACATGGCTTTGTGGTCTGTaGGTCCAGAGTGACACCTCT | + |
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Preference number: 2 (lower is better) Translates to: LHSERSPCPGTGVKGLATWLCGL*VQSDTS Trigger: AGAGGTGTCACTCTGGACCCACAGACCACAAAGCCA...TGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGACTGAAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCCCACACCTGGTTTTCTTAAAGTGAAGTaGCCAGAACAGCAGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: MVTEALVWDICKVSPTPGFLKVK*PEQQQH Trigger: GTGCTGCTGCTGTTCTGGCCACTTCACTTTAAGAAA...ACCAGGTGTGGGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025329.13 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAGAACAGCAGCCGCCACTCAAGTaGCAATCACAGAGAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: GVTAVSEDLFLKVKWPEQQPPLK*QSQRGL Trigger: CAGTCCTCTCTGTGATTGCCACTTGAGTGGCGGCTG...CTGTTCTGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCCTGCATCAAGTTTTCTaGAAATGTCCTCATCATCTT | + |
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Preference number: 2 (lower is better) Translates to: TGLGFVVCGSRVTPLPRFLHQVF*KCPHHL Trigger: AAGATGATGAGGACATTTTCAGAAAACTTGATGCAG...GAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAGAACAGTCCATCCAGGCTGCCTaGTTCCTAGGCTTCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: GVTAVSEDLFLKVKWPEQSIQAA*FLGFCF Trigger: GAAACAGAAGCCTAGGAAGCAGGCAGCCTGGATGGA...CTGTTCTGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAGAACAGTCTGAAGGACAGGAGTaGCAGCTGTGTCTGAGGATT | + |
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Preference number: 2 (lower is better) Translates to: GVTAVSEDLFLKVKWPEQSEGQE*QLCLRI Trigger: AATCCTCAGACACAGCTGTCACTCCTGTCCTTCAGA...CTGTTCTGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTTTGGTGCTCAGGTCCTaGCATCCCCTCACCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: AFTAFCLLPFQIPLTHSFLVLRS*HPLTLD Trigger: GTCCAGGGTGAGGGGATGGCAGGACCTGAGCACCAA...AAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGTAAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTTTTACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCATGGCAGGTGGGCGCTaGCCAGTTGGAGCAAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: EAFTAFCLLPFQIPLTHSMAGGR*PVGAKV Trigger: TACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCAT...GCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGTAAAAGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTTCCTGTCTGCTGGCTCTCCATTCAGAGAGATCACCGTGTCCAGGAACAAACTTACTTTCCAGGTaGGATAGGGTTAGAAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: MPSCLLALHSERSPCPGTNLLSR*DRVRKR Trigger: TCTTTTTCTAACCCTATCCCACCTGGAAAGTAAGTT...TGTTCCTGGACACGGTGATCTCTCTGAATGGAGAGCCAGCAGACAGGAAGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTCAGCCGCCACTCAAGTaGCAATCACAGAGAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: AFTAFCLLPFQIPLTHSFQPPLK*QSQRGL Trigger: CAGTCCTCTCTGTGATTGCCACTTGAGTGGCGGCTG...AAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGTAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTGCTGGTAATCACAGAGAGGACTaGACTTGGCTTTGTGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TAFCLLPFQIPLTHSFAGNHRED*TWLCGL Trigger: CAGACCACAAAGCCAAGTCCAGTCCTCTCTGTGATT...ACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTTACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTGAAAAAGATGGTGACTaGAGCCTTGGTGTGGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: AFTAFCLLPFQIPLTHSFEKDGD*SLGVGH Trigger: ATGTCCCACACCAAGGCTTCAGTCACCATCTTTTTC...AAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGTAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR TCA 72 bp | GGACTGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTaGCACCTCTTCCCCGCTTCAGGATGGAGCGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: GLDLALWSVGPE*HLFPASGWSGI Trigger: GATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | GCAGGTGGGCGCTGGCCAGTTGGAGCAAAAGTATTATaGCCCAGACAATGTCCTTGGTGCTCAGGTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGGRWPVGAKVL*PRQCPWCSGPA Trigger: GGCAGGACCTGAGCACCAAGGACATTGTCTGGGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR GCA 72 bp | CACATCTACACTGCGCAGGACAGCTGTGTCTCCTTTTaGATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HIYTAQDSCVSF*MAGGRWPVGAK Trigger: TTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCCTGCGCAGTGTAGATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR GCA 72 bp | CATTTGAATGCTAGGGACAGAGCTGGGTTCCAAGGGTaGTGGTGTGTCTGCCGCATTTCCCTGGCTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: HLNARDRAGFQG*WCVCRISLAPP Trigger: AGGTGGAGCCAGGGAAATGCGGCAGACACACCAGCACCCTTGGAACCCAGCTCTGTCCCTAGCATTCAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | TGCAGCCGCCACTCAAGTGGCAATCACAGAGAGGACTaGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CSRHSSGNHRED*TWLCGLWVQSD Trigger: GTCACTCTGGACCCACAGACCACAAAGCCAAGTCCAGTCCTCTCTGTGATTGCCACTTGAGTGGCGGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | TGCGCAGGACAGCTGTGTCTCCTTTTGCATGGCAGGTaGGCGCTGGCCAGTTGGAGCAAAAGTATTATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CAGQLCLLLHGR*ALASWSKSIMA Trigger: GGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCCTGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | GGTTCCAAGGGTGCTGGTGTGTCTGCCGCATTTCCCTaGCTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GSKGAGVSAAFP*LHLSLSKAGRG Trigger: TCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAGCCAGGGAAATGCGGCAGACACACCAGCACCCTTGGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR-3UTR CAA 90 bp | GACATTTGCAAGGTCTCTCCCACACCTGGTCACATCTACACTGCGCAGGACAGCCAGAGAGGACTGGACTaGGCTTTGTGGTCTGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: DICKVSPTPGHIYTAQDSQRGLD*ALWSVG Trigger: ACCCACAGACCACAAAGCCAAGTCCAGTCCTCTCTG...GCTGTCCTGCGCAGTGTAGATGTGACCAGGTGTGGGAGAGACCTTGCAAATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR TCA 72 bp | ATCCCCTCACCCTGGACACTTAGGGGACCATTCTCATaGTGCAGCCGCCACTCAAGTGGCAATCACAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IPSPWTLRGPFS*CSRHSSGNHRE Trigger: CTCTCTGTGATTGCCACTTGAGTGGCGGCTGCATCATGAGAATGGTCCCCTAAGTGTCCAGGGTGAGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTAGGGTCCACCCAGAGTTGTTGATGAAGCCCTGTAGCATCTCCAGCTTCCTTGGTGTGGGACATTaGCAAGGTCTCTCCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: GFRVHPELLMKPCSISSFLGVGH*QGLSHT Trigger: GGTGTGGGAGAGACCTTGCAAATGTCCCACACCAAG...GAAGCTGGAGATGCTACAGGGCTTCATCAACAACTCTGGGTGGACCCTAAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | AATCACAGAGAGGACTGGACTTGGCTTTGTGGTCTGTaGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: NHREDWTWLCGL*VQSDTSSPLQD Trigger: ATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCAGTCCTCTCTGTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | GTTGGAGCAAAAGTATTATGGCCCAGACAATGTCCTTaGTGCTCAGGTCCTGCCATCCCCTCACCCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: VGAKVLWPRQCP*CSGPAIPSPWT Trigger: TGTCCAGGGTGAGGGGATGGCAGGACCTGAGCACCAAGGACATTGTCTGGGCCATAATACTTTTGCTCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | GACAGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTaGCCAGTTGGAGCAAAAGTATTATGGCCCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: DSCVSFCMAGGR*PVGAKVLWPRQ Trigger: TTGTCTGGGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | TGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTTaGAGCAAAAGTATTATGGCCCAGACAATGTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLLLHGRWALAS*SKSIMAQTMSL Trigger: CAAGGACATTGTCTGGGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR CCA 72 bp | CTTTGCTGGTGTCTAGGACAATGCCTTCCTGTCTGCTaGCTCTCCATTCAGAGAGATCACCGTGTCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCWCLGQCLPVC*LSIQRDHRVQE Trigger: TTCCTGGACACGGTGATCTCTCTGAATGGAGAGCCAGCAGACAGGAAGGCATTGTCCTAGACACCAGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR TCA 72 bp | TTTCCAGGTGGGATAGGGTTAGAAAAAGATGGTGACTaGAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FPGGIGLEKDGD*SLGVGHLQGLS Trigger: GGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCACCATCTTTTTCTAACCCTATCCCACCTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR TCA 72 bp | TCTGGGCTCACAAAAGTCTTCAGCTCGTACCTGCTCTaGTTGAGTCTGGCATCCTTCTCAATCGAGGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: SGLTKVFSSYLL*LSLASFSIEVI Trigger: GATTACCTCGATTGAGAAGGATGCCAGACTCAATCAGAGCAGGTACGAGCTGAAGACTTTTGTGAGCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACAGCTGTGTCTGAGGATTaGTTTCTTAAAGTGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LHSERSPCPGTGVKGLATAVSED*FLKVKW Trigger: CCACTTCACTTTAAGAAACAAATCCTCAGACACAGC...TGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025329.13 |
||
| 3UTR-3UTR CAA 90 bp | GTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAGAACAGCAGGCTGTGTCTGAGGATTaGTTTCTTAAAGTGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VTAVSEDLFLKVKWPEQQAVSED*FLKVKW Trigger: CCACTTCACTTTAAGAAACAAATCCTCAGACACAGC...CTGCTGTTCTGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAGAACAGAGGTTTCGGATCTTCTaGACAAGATCAGAGGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: GVTAVSEDLFLKVKWPEQRFRIF*TRSEEM Trigger: CATTTCCTCTGATCTTGTCAAGAAGATCCGAAACCT...CTGTTCTGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
||
| 3UTR TCA 72 bp | TTACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTaGCTCATAGCTTTGCTGGTGTCTAGGACAATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LQLFVCFPSKSH*LIALLVSRTMP Trigger: AGGCATTGTCCTAGACACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGCCTGCTTCCAGAGGGCACAGCAGCTaGGCTCCCATTGGGGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPLPRFRMERHPSRLPASRGHSS*APIGVR Trigger: GCGCACCCCAATGGGAGCCCAGCTGCTGTGCCCTCT...GGAAGCAGGCAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025329.13 |
||
| CDS-3UTR CCA 90 bp | CTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGCCCACAGTGTGTGCCTaGTGGGCGGGGCCCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCGLWVQSDTSSPLQDGAPTVCA*WAGPSL Trigger: CAGGGAGGGCCCCGCCCACCAGGCACACACTGTGGG...CGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | AGTATTATGGCCCAGACAATGTCCTTGGTGCTCAGGTCCTGCCATCCCCTCACCGGGCTCCCATTGGGGTaGGCGGGAGGCAGAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIMAQTMSLVLRSCHPLTGLPLG*AGGRVG Trigger: GCCTACTCTGCCTCCCGCGCACCCCAATGGGAGCCC...GGTGAGGGGATGGCAGGACCTGAGCACCAAGGACATTGTCTGGGCCATAATACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | AGTATTATGGCCCAGACAATGTCCTTGGTGCTCAGGTCCTGCCATCCCCTCACCGAACCCCACAGTGTGTaGCTGGTGGGCGGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIMAQTMSLVLRSCHPLTEPHSV*LVGGAL Trigger: GAGGGCCCCGCCCACCAGGCACACACTGTGGGGTTC...GGTGAGGGGATGGCAGGACCTGAGCACCAAGGACATTGTCTGGGCCATAATACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATGGGGCCACTGCGGCCTaGATTTTCTCCTCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVCGSRVTPLPRFRMERHGATAA*IFSSSA Trigger: GGCAGAAGAGGAGAAAATCCAGGCCGCAGTGGCCCC...ATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | GGACATTTGCAAGGTCTCTCCCACACCTGGTCACATCTACACTGCGCAGGACAGACAGTGTGTGCCTGGTaGGCGGGGCCCTCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHLQGLSHTWSHLHCAGQTVCAW*AGPSLQ Trigger: CTGCAGGGAGGGCCCCGCCCACCAGGCACACACTGT...CTGTCCTGCGCAGTGTAGATGTGACCAGGTGTGGGAGAGACCTTGCAAATGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGCATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAAAGTATTATGGCCCAGAGGGCTCCCATTGGGGTaGGCGGGAGGCAGAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCMAGGRWPVGAKVLWPRGLPLG*AGGRVG Trigger: GCCTACTCTGCCTCCCGCGCACCCCAATGGGAGCCC...TCTGGGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAAAGTAAGAGGGCACAGCAGCTaGGCTCCCATTGGGGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCVSFCMAGGRWPVGAKVRGHSS*APIGVR Trigger: GCGCACCCCAATGGGAGCCCAGCTGCTGTGCCCTCT...TACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCGCAGGACAGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTCCCTGTAGGGTTGGATaGCTTCATCCAGGAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCAGQLCLLLHGRWALASPCRVG*LHPGTP Trigger: TGGGGTTCCTGGATGAAGCCATCCAACCCTACAGGG...ACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCCTGCGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATAGCAGGAGGCATCTCTaGTCCACAAGCTCCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVCGSRVTPLPRFRMERHSRRHL*STSSRF Trigger: GAAGCGGGAGCTTGTGGACCAGAGATGCCTCCTGCT...ATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGCCTGCTTCCTAGCCGGTCGACCTCCTaGGAGACTTTGCTGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLFPASGWSGIHPGCLLPSRSTS*ETLLMY Trigger: GTACATCAGCAAAGTCTCCCAGGAGGTCGACCGGCT...AGGAAGCAGGCAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
||
| CDS-3UTR TCA 90 bp | GACATTTGCAAGGTCTCTCCCACACCTGGTCACATCTACACTGCGCAGGACAGCTCCTCTTCTGCCCCCTaGCAGAGAGGGCACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DICKVSPTPGHIYTAQDSSSSAP*QRGHSS Trigger: GCTGCTGTGCCCTCTCTGTCAGGGGGCAGAAGAGGA...GCTGTCCTGCGCAGTGTAGATGTGACCAGGTGTGGGAGAGACCTTGCAAATGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTTAGGGTCCACCCAGAGTTGTTGATGAAGCCCTGTAGCATCTCCAGCTTCTCCTCTTCTGCCCCCTaGCAGAGAGGGCACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFRVHPELLMKPCSISSFSSSAP*QRGHSS Trigger: GCTGCTGTGCCCTCTCTGTCAGGGGGCAGAAGAGGA...GAAGCTGGAGATGCTACAGGGCTTCATCAACAACTCTGGGTGGACCCTAAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATTCACTTGCTGGTTGCTaGCACTTCTCCTCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVCGSRVTPLPRFRMERHSLAGC*HFSSSS Trigger: GGAGCTAGAGGAGAAGTGTCAGCAACCAGCAAGTGA...ATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCAGATTTTCTCCTCTTCTaGCCCCTGACAGAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLWVQSDTSSPLQDGAADFLLF*PLTERA Trigger: TGCCCTCTCTGTCAGGGGGCAGAAGAGGAGAAAATC...TGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | CCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACACAGAACCCCACAGTGTGTaGCTGGTGGGCGGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFREITVSRNRSERTCYTEPHSV*LVGGAL Trigger: GAGGGCCCCGCCCACCAGGCACACACTGTGGGGTTC...TGTGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCAGAAGCTCACTTGCTaGTTGCTGACACTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRVTPLPRFRMERHPSRQKLTC*LLTLLL Trigger: GAGGAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTG...CCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | GTGACTGAAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCCCACACCTGGTCACCCTGCAAGGGTCGGGTaGAGACAGGACAGGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VTEALVWDICKVSPTPGHPARVG*RQDRLL Trigger: AAGTAGCCTGTCCTGTCTGCACCCGACCCTTGCAGG...GTGACCAGGTGTGGGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCACTCTTCCCTCTCCTTaGAGATCTGCCGTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLWVQSDTSSPLQDGAASTLPSP*RSAVLV Trigger: AACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGT...GGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | ACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGCCTGCTTCCTTGCAGAAGCTCACTTaGTGGTTGCTGACACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPLPRFRMERHPSRLPASLQKLT*WLLTLL Trigger: GAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAA...GGAAGCAGGCAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
||
| CDS-3UTR GCA 90 bp | CACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGCCTGCTTCCTTTGAGTCTGGCATCTTaGAGAAGCTCACTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLFPASGWSGIHPGCLLPLSLAS*RSSLAG Trigger: ACCAGCAAGTGAGCTTCTGCAAGATGCCAGACTCAA...AGGAAGCAGGCAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025329.13 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCCGCATTTCCCTGGCTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGAAGGGGCCACTGCGGCCTaGATTTTCTCCTCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLPHFPGSTLVFQRQAEEGATAA*IFSSSA Trigger: GGCAGAAGAGGAGAAAATCCAGGCCGCAGTGGCCCC...TTCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAGCCAGGGAAATGCGGCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | AGTATTATGGCCCAGACAATGTCCTTGGTGCTCAGGTCCTGCCATCCCCTCACCAGCAGGAGGCATCTCTaGTCCACAAGCTCCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIMAQTMSLVLRSCHPLTSRRHL*STSSRF Trigger: GAAGCGGGAGCTTGTGGACCAGAGATGCCTCCTGCT...GGTGAGGGGATGGCAGGACCTGAGCACCAAGGACATTGTCTGGGCCATAATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGCCGGTCGACCTCCTaGGAGACTTTGCTGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TGLGFVVCGSRVTPLPRFSRSTS*ETLLMY Trigger: GTACATCAGCAAAGTCTCCCAGGAGGTCGACCGGCT...GAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGCAGAAGCTCACTTGCTaGTTGCTGACACTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRVTPLPRFRMERHPSRLQKLTC*LLTLLL Trigger: GAGGAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTG...CAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCACAGAAGCTCACTTGCTaGTTGCTGACACTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGLWVQSDTSSPLQDGAAQKLTC*LLTLLL Trigger: GAGGAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTG...TGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| 3UTR CAA 72 bp | TCACATCTACACTGCGCAGGACAGCTGTGTCTCCTTTaGCATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHLHCAGQLCLL*HGRWALASWSK Trigger: TTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCCTGCGCAGTGTAGATGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCCCTGCAAGGGTCGGGTaGAGACAGGACAGGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GSPFREITVSRNRSERTCPARVG*RQDRLL Trigger: AAGTAGCCTGTCCTGTCTGCACCCGACCCTTGCAGG...GCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCACTCTTCCCTCTCCTTaGAGATCTGCCGTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CGSRVTPLPRFRMERHPSTLPSP*RSAVLV Trigger: AACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGT...GGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCGTGGAGTCTCTTACTTaGAGAAGCTCACTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGSRVTPLPRFRMERHPSVESLT*RSSLAG Trigger: ACCAGCAAGTGAGCTTCTGCAAGTAAGAGACTCCAC...GGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCACACCTGGTCACATCTACACTGCGCAGGACAGCTGTGTCTCCTTTTGAGCCGGTCGACCTCCTaGGAGACTTTGCTGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHTWSHLHCAGQLCLLLSRSTS*ETLLMY Trigger: GTACATCAGCAAAGTCTCCCAGGAGGTCGACCGGCT...CAAAAGGAGACACAGCTGTCCTGCGCAGTGTAGATGTGACCAGGTGTGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCAGGTTTCGGATCTTCTTaGCAAGATCAGAGGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CGLWVQSDTSSPLQDGAAGFGSS*QDQRKW Trigger: CCATTTCCTCTGATCTTGTCAAGAAGATCCGAAACC...TGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGTTGCAGAAGCTCACTTaGTGGTTGCTGACACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCGLWVQSDTSSPLQDGALQKLT*WLLTLL Trigger: GAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAA...CGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTGCTGGTCCCACAGTGTGTGCCTaGTGGGCGGGGCCCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAFCLLPFQIPLTHSFAGPTVCA*WAGPSL Trigger: CAGGGAGGGCCCCGCCCACCAGGCACACACTGTGGG...ACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGAACTTACTTTCCAGGTGGGAAGCAGGAGGCATCTCTaGTCCACAAGCTCCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSTLVFQRQAEELTFQVGSRRHL*STSSRF Trigger: GAAGCGGGAGCTTGTGGACCAGAGATGCCTCCTGCT...TCCCACCTGGAAAGTAAGTTCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTGAAAGCAGCTTCTACCTaGTGCTTTTTGCTTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SRVTPLPRFRMERHPSRLKAAST*CFLLST Trigger: GGTTGAAAGCAAAAAGCATCAGGTAGAAGCTGCTTT...CAGCCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | CACTGCGCAGGACAGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTGAATCTGTCTCCAGATaGTGCATCAAGTTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCAGQLCLLLHGRWALASESVSR*CIKFSE Trigger: TTCAGAAAACTTGATGCAGCATCTGGAGACAGATTC...ACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCCTGCGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| 3UTR CAA 72 bp | GTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTaGGAGCAAAAGTATTATGGCCCAGACAATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSPFAWQVGAGQ*EQKYYGPDNVL Trigger: AAGGACATTGTCTGGGCCATAATACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | GGACATTTGCAAGGTCTCTCCCACACCTGGTCACATCTACACTGCGCAGGACAGTTGCAGAAGCTCACTTaGTGGTTGCTGACACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHLQGLSHTWSHLHCAGQLQKLT*WLLTLL Trigger: GAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAA...CTGTCCTGCGCAGTGTAGATGTGACCAGGTGTGGGAGAGACCTTGCAAATGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAAAGTAAGAGGAAATGGCCTCTaGGCTCACAAAAGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCVSFCMAGGRWPVGAKVRGNGL*AHKSLQ Trigger: CTGAAGACTTTTGTGAGCCCAGAGGCCATTTCCTCT...TACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGTGTGTCTGCCGCATTTCCCTGGCTCCACCTTAGTCTTTCAAAGGCAGAGAGGAAATGGCCTCTaGGCTCACAAAAGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLVCLPHFPGSTLVFQRQRGNGL*AHKSLQ Trigger: CTGAAGACTTTTGTGAGCCCAGAGGCCATTTCCTCT...CTGCCTTTGAAAGACTAAGGTGGAGCCAGGGAAATGCGGCAGACACACCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCCTAAGTATTTTCCTGTaGAGGTTTCGGATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGSRVTPLPRFRMERHPSLSIFL*RFRIFL Trigger: CAAGAAGATCCGAAACCTCCACAGGAAAATACTTAG...GGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGCCTGCTTCCTAGGCTTCTGTTTCTGAAGGACAGGAGTGACAGCTGTTTTTTGCTTTCAACCTaGATCAGAACCTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGCLLPRLLFLKDRSDSCFLLST*IRTSWS Trigger: GCTCCAGGAGGTTCTGATGCAGGTTGAAAGCAAAAA...ACAGCTGTCACTCCTGTCCTTCAGAAACAGAAGCCTAGGAAGCAGGCAGCCTGG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
||
| CDS-3UTR TCA 90 bp | TGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGAGCTTCTGGTCTTCTTaGCATTTCCTATCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: WTWLCGLWVQSDTSSPLQSFWSS*HFLSSI Trigger: GATAGAAGATAGGAAATGTCAAGAAGACCAGAAGCT...CTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | GGACAGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAACTGCATCAAGTTTTCTaGAAATGTCCTCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQLCLLLHGRWALASWSKLHQVF*KCPHHL Trigger: AAGATGATGAGGACATTTTCAGAAAACTTGATGCAG...TTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCCGCATTTCCCTGGCTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGAATTTTTGCTTTCAACCTaGATCAGAACCTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPHFPGSTLVFQRQAEEFLLST*IRTSWS Trigger: GCTCCAGGAGGTTCTGATGCAGGTTGAAAGCAAAAA...TTCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAGCCAGGGAAATGCGGCAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCCTAAGTATTTTCCTGTaGAGGTTTCGGATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGLGFVVCGSRVTPLPRFLSIFL*RFRIFL Trigger: CAAGAAGATCCGAAACCTCCACAGGAAAATACTTAG...GAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTGCCGCATTTCCCTGGCTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGAAAAAGCAGCTTCTACCTaGTGCTTTTTGCTTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: CLPHFPGSTLVFQRQAEEKAAST*CFLLST Trigger: GGTTGAAAGCAAAAAGCATCAGGTAGAAGCTGCTTT...TTCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAGCCAGGGAAATGCGGCAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAGAACAGTCACTTGCTGGTTGCTaGCACTTCTCCTCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTAVSEDLFLKVKWPEQSLAGC*HFSSSS Trigger: GGAGCTAGAGGAGAAGTGTCAGCAACCAGCAAGTGA...CTGTTCTGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACACACTAGGCTTCTGTTTCTaGATCTGTCTCCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFREITVSRNRSERTCYTLGFCF*ICLQML Trigger: CAGCATCTGGAGACAGATTCAGAAACAGAAGCCTAG...TGTGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACATTGAGTCTGGCATCTTaGAGAAGCTCACTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHSERSPCPGTGVKGLATLSLAS*RSSLAG Trigger: ACCAGCAAGTGAGCTTCTGCAAGATGCCAGACTCAA...TGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGTGTGTCTGCCGCATTTCCCTGGCTCCACCTTAGTCTTTCAAAGGCAGGAATCTGTCTCCAGATaGTGCATCAAGTTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLVCLPHFPGSTLVFQRQESVSR*CIKFSE Trigger: TTCAGAAAACTTGATGCAGCATCTGGAGACAGATTC...CTGCCTTTGAAAGACTAAGGTGGAGCCAGGGAAATGCGGCAGACACACCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACACAAGATTCCCAAGATCAGAGGAAATaGCCTCTGGGCTCACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERSPCPGTGVKGLATQDSQDQRK*PLGSQK Trigger: CTTTTGTGAGCCCAGAGGCCATTTCCTCTGATCTTG...GGAATCTTGTGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | CCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACACACAAGATCAGAGGAAATaGCCTCTGGGCTCACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFREITVSRNRSERTCYTQDQRK*PLGSQK Trigger: CTTTTGTGAGCCCAGAGGCCATTTCCTCTGATCTTG...TGTGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | GTGACTGAAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCCCACACCTGGTCACTGTCCTCATCATCTTTaGGAGGCTAAGTATTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTEALVWDICKVSPTPGHCPHHL*EAKYFP Trigger: AGGAAAATACTTAGCCTCCCAAAGATGATGAGGACA...GTGACCAGGTGTGGGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGTTGGAGCAAAAGTATTATGGCCCAGACAATGTCCTTGGTGCTCAGGTCCAAAGCAGCTTCTACCTaGTGCTTTTTGCTTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: ASWSKSIMAQTMSLVLRSKAAST*CFLLST Trigger: GGTTGAAAGCAAAAAGCATCAGGTAGAAGCTGCTTT...GGACCTGAGCACCAAGGACATTGTCTGGGCCATAATACTTTTGCTCCAACTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTGCTGGTCCCTGTAGGGTTGGATaGCTTCATCCAGGAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAFCLLPFQIPLTHSFAGPCRVG*LHPGTP Trigger: TGGGGTTCCTGGATGAAGCCATCCAACCCTACAGGG...ACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTAGCTTCTGGTCTTCTTaGCATTTCCTATCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: ALHSERSPCPGTGVKGLASFWSS*HFLSSI Trigger: GATAGAAGATAGGAAATGTCAAGAAGACCAGAAGCT...AGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR GCA 90 bp | GTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAGAACAGCAGACTCTTCCCTCTCCTTaGAGATCTGCCGTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTAVSEDLFLKVKWPEQQTLPSP*RSAVLV Trigger: AACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGT...CTGCTGTTCTGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
||
| 3UTR CAA 72 bp | AGGCTAAGTATTTTCCTGTGGAGGTTTCGGATCTTCTaGACAAGATCAGAGGAAATGGCCTCTGGGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RLSIFLWRFRIF*TRSEEMASGLT Trigger: TGTGAGCCCAGAGGCCATTTCCTCTGATCTTGTCAAGAAGATCCGAAACCTCCACAGGAAAATACTTAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTACACAAGATTCCAGCTTCTGGTCTTCTTaGCATTTCCTATCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: ERSPCPGTGVKGLATQDSSFWSS*HFLSSI Trigger: GATAGAAGATAGGAAATGTCAAGAAGACCAGAAGCT...GGAATCTTGTGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | AGGACAGGAGTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAGGTTTCGGATCTTCTTaGCAAGATCAGAGGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGVTAVSEDLFLKVKWPGFGSS*QDQRKW Trigger: CCATTTCCTCTGATCTTGTCAAGAAGATCCGAAACC...TGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCACTCCTGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025329.13 |
||
| CDS-3UTR GCA 90 bp | CTTAGTCTTTCAAAGGCAGGCAGAGGAACTTACTTTCCAGGTGGGATAGGGTTATTTTTGCTTTCAACCTaGATCAGAACCTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSKAGRGTYFPGGIGLFLLST*IRTSWS Trigger: GCTCCAGGAGGTTCTGATGCAGGTTGAAAGCAAAAA...TAACCCTATCCCACCTGGAAAGTAAGTTCCTCTGCCTGCCTTTGAAAGACTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTTACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTTCACTTGCTGGTTGCTaGCACTTCTCCTCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFTAFCLLPFQIPLTHSFSLAGC*HFSSSS Trigger: GGAGCTAGAGGAGAAGTGTCAGCAACCAGCAAGTGA...AAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGTAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR TCA 90 bp | CTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGAACTTACTTTCCAGGTGGGATACTGCATCAAGTTTTCTaGAAATGTCCTCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLSLSKAGRGTYFPGGILHQVF*KCPHHL Trigger: AAGATGATGAGGACATTTTCAGAAAACTTGATGCAG...TATCCCACCTGGAAAGTAAGTTCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTGCTGGTTGTCCTCATCATCTTTaGGAGGCTAAGTATTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAFCLLPFQIPLTHSFAGCPHHL*EAKYFP Trigger: AGGAAAATACTTAGCCTCCCAAAGATGATGAGGACA...ACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS GCA 90 bp | ATCCCTGTAGGGTTGGATGGCTTCATCCAGGAACCCCACAGTGTGTaGCTGGTGGGCGGGGCCCTCCCTGCAGAACACGCAGAGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPVGLDGFIQEPHSV*LVGGALPAEHAEQL Trigger: GAGCTGCTCTGCGTGTTCTGCAGGGAGGGCCCCGCCCACCAGGCACACACTGTGGGGTTCCTGGATGAAGCCATCCAACCCTACAGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | TGGACTTGGCTTTGTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGACAGGACAGGCTACTaGGTGAAGTCCCCGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WTWLCGLWVQSDTSSPLQDRTGY*VKSPQG Trigger: TCCCTGCGGGGACTTCACCAAGTAGCCTGTCCTGTC...CTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCACAAAGCCAAGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | GGACATTTGCAAGGTCTCTCCCACACCTGGTCACATCTACACTGCGCAGGACAGGACAGGACAGGCTACTaGGTGAAGTCCCCGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GHLQGLSHTWSHLHCAGQDRTGY*VKSPQG Trigger: TCCCTGCGGGGACTTCACCAAGTAGCCTGTCCTGTC...CTGTCCTGCGCAGTGTAGATGTGACCAGGTGTGGGAGAGACCTTGCAAATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATCCATCCAGGCTTGCAGAAGCTCACTaGCTGGTTGCTGACACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSRVTPLPRFRMERHPSRLAEAH*LVADTS Trigger: AGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAAG...CCTGGATGGATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTCTGTGGGTCCAGAGTGACACCTCTTCCCCGCTTCAGGATGGAGCGGCATTACTCTTCCCTCTCCTaGCAGATCTGCCGTTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: VVCGSRVTPLPRFRMERHYSSLS*QICRSS Trigger: ACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGTA...ATGCCGCTCCATCCTGAAGCGGGGAAGAGGTGTCACTCTGGACCCACAGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS TCA 90 bp | AGGGTTGTGGAGTCTCTTACTTGCAGAAGCTCACTTGCTGGTTGCTaGCACTTCTCCTCTAGCTCCTCCACCTGGGTACTCAGCCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RVVESLTCRSSLAGC*HFSSSSSTWVLSRS Trigger: CGACCGGCTGAGTACCCAGGTGGAGGAGCTAGAGGAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAAGTAAGAGACTCCACAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
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| CDS GCA 90 bp | TCCTGGGAGACTTTGCTGATGTACTCTTCCCTCTCCTTGCAGATCTaGCGTTCTAGTTCCTCCAGCCTGTTCAGCAGGAGGCATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWETLLMYSSLSLQI*RSSSSSLFSRRHLW Trigger: CCAGAGATGCCTCCTGCTGAACAGGCTGGAGGAACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGTACATCAGCAAAGTCTCCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTGACTGAAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCCCACACCTGGTTACTCTTCCCTCTCCTaGCAGATCTGCCGTTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: MVTEALVWDICKVSPTPGYSSLS*QICRSS Trigger: ACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGTA...ACCAGGTGTGGGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTGACTGAAGCCTTGGTGTGGGACATTTGCAAGGTCTCTCCCACACCTGGTCTTGCAGAAGCTCACTaGCTGGTTGCTGACACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MVTEALVWDICKVSPTPGLAEAH*LVADTS Trigger: AGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAAG...ACCAGGTGTGGGAGAGACCTTGCAAATGTCCCACACCAAGGCTTCAGTCACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS TCA 90 bp | CTTCTATCTTGTCCCTCTCCATTCTTAGAGCTTCTAACCGACTCCTaGGACGATCCCTGTAGGGTTGGATGGCTTCATCCAGGAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSCPSPFLELLTDS*DDPCRVGWLHPGTP Trigger: TGGGGTTCCTGGATGAAGCCATCCAACCCTACAGGGATCGTCTCAGGAGTCGGTTAGAAGCTCTAAGAATGGAGAGGGACAAGATAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCATTCAGAGAGATCACCGTGTCCAGGAACAGGAGTGAAAGGACTTGCTTACTCTTCCCTCTCCTaGCAGATCTGCCGTTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALHSERSPCPGTGVKGLAYSSLS*QICRSS Trigger: ACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGTA...AGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTGATCTCTCTGAATGGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS TCA 90 bp | TGGTCCACAAGCTCCCGCTTCAGCCTTTCAAAAGCAGCTTCTACCTaGTGCTTTTTGCTTTCAACCTGCATCAGAACCTCCTGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSTSSRFSLSKAAST*CFLLSTCIRTSWSF Trigger: GAAGCTCCAGGAGGTTCTGATGCAGGTTGAAAGCAAAAAGCATCAGGTAGAAGCTGCTTTTGAAAGGCTGAAGCGGGAGCTTGTGGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTCCTTTTGCATGGCAGGTGGGCGCTGGCCAGTTGGAGCAAAAGTAAGGTTTCGGATCTTCTaGACAAGATCAGAGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: SCVSFCMAGGRWPVGAKVRFRIF*TRSEEM Trigger: CATTTCCTCTGATCTTGTCAAGAAGATCCGAAACCT...TACTTTTGCTCCAACTGGCCAGCGCCCACCTGCCATGCAAAAGGAGACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS GCA 90 bp | GCTCCCGCTTCAGCCTTTCAAAAGCAGCTTCTACCTGATGCTTTTTaGTTTCAACCTGCATCAGAACCTCCTGGAGCTTCTGGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: APASAFQKQLLPDAF*FQPASEPPGASGLL Trigger: AAGAAGACCAGAAGCTCCAGGAGGTTCTGATGCAGGTTGAAAGCAAAAAGCATCAGGTAGAAGCTGCTTTTGAAAGGCTGAAGCGGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGTCTTTCAAAGGCAGGCAGAGGAACTTACTTTCCAGGTGGGATAGGGTTAACGATCCCTGTAGGGTaGGATGGCTTCATCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSKAGRGTYFPGGIGLTIPVG*DGFIQE Trigger: TTCCTGGATGAAGCCATCCAACCCTACAGGGATCGT...TAACCCTATCCCACCTGGAAAGTAAGTTCCTCTGCCTGCCTTTGAAAGACTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGAGTGACAGCTGTGTCTGAGGATTTGTTTCTTAAAGTGAAGTGGCCAACCTCCTGGGAGACTTaGCTGATGTACTCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTGVTAVSEDLFLKVKWPTSWET*LMYSSL Trigger: GAGGGAAGAGTACATCAGCAAAGTCTCCCAGGAGGT...TGGCCACTTCACTTTAAGAAACAAATCCTCAGACACAGCTGTCACTCCTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTGCTGGTACGATCCCTGTAGGGTaGGATGGCTTCATCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TAFCLLPFQIPLTHSFAGTIPVG*DGFIQE Trigger: TTCCTGGATGAAGCCATCCAACCCTACAGGGATCGT...ACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCCACCTTAGTCTTTCAAAGGCAGGCAGAGGAACTTACTTTCCAGGTGGGATTCCTATCTTCTATCTaGTCCCTCTCCATTCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSTLVFQRQAEELTFQVGFLSSI*SLSILR Trigger: TCTAAGAATGGAGAGGGACAAGATAGAAGATAGGAA...TCCCACCTGGAAAGTAAGTTCCTCTGCCTGCCTTTGAAAGACTAAGGTGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGGAGGCTAAGTATTTTCCTGTGGAGGTTTCGGATCTTCTTGACAAGATCAACCTCCTGGGAGACTTaGCTGATGTACTCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FGRLSIFLWRFRIFLTRSTSWET*LMYSSL Trigger: GAGGGAAGAGTACATCAGCAAAGTCTCCCAGGAGGT...TGATCTTGTCAAGAAGATCCGAAACCTCCACAGGAAAATACTTAGCCTCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTGCTGGTACCTCCTGGGAGACTTaGCTGATGTACTCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TAFCLLPFQIPLTHSFAGTSWET*LMYSSL Trigger: GAGGGAAGAGTACATCAGCAAAGTCTCCCAGGAGGT...ACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTGCTGGTCTTGCAGAAGCTCACTaGCTGGTTGCTGACACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAFCLLPFQIPLTHSFAGLAEAH*LVADTS Trigger: AGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAAG...ACCAGCAAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGGAGGCTAAGTATTTTCCTGTGGAGGTTTCGGATCTTCTTGACAAGATCATGTGGAGTCTCTTACTaGCAGAAGCTCACTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FGRLSIFLWRFRIFLTRSCGVSY*QKLTCW Trigger: CCAGCAAGTGAGCTTCTGCAAGTAAGAGACTCCACA...TGATCTTGTCAAGAAGATCCGAAACCTCCACAGGAAAATACTTAGCCTCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
||
| CDS TCA 90 bp | TTGCTTTCAACCTGCATCAGAACCTCCTGGAGCTTCTGGTCTTCTTaGCATTTCCTATCTTCTATCTTGTCCCTCTCCATTCTTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSTCIRTSWSFWSS*HFLSSILSLSILRA Trigger: AGCTCTAAGAATGGAGAGGGACAAGATAGAAGATAGGAAATGTCAAGAAGACCAGAAGCTCCAGGAGGTTCTGATGCAGGTTGAAAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
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| CDS-3UTR CAA 90 bp | GCTTTTACAGCTTTTTGTTTGCTTCCCTTCCAAATCCCATTGACTCATAGCTTTAGGTTTCGGATCTTCTaGACAAGATCAGAGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: AFTAFCLLPFQIPLTHSFRFRIF*TRSEEM Trigger: CATTTCCTCTGATCTTGTCAAGAAGATCCGAAACCT...AAAGCTATGAGTCAATGGGATTTGGAAGGGAAGCAAACAAAAAGCTGTAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS GCA 72 bp | ACCCCACAGTGTGTGCCTGGTGGGCGGGGCCCTCCCTaGAGAACACGCAGAGCAGCTCCGCGTCTGTCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: TPQCVPGGRGPP*RTRRAAPRLSY Trigger: GTAAGACAGACGCGGAGCTGCTCTGCGTGTTCTGCAGGGAGGGCCCCGCCCACCAGGCACACACTGTGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
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| CDS GCA 72 bp | GGGTTGGATGGCTTCATCCAGGAACCCCACAGTGTGTaGCTGGTGGGCGGGGCCCTCCCTGCAGAACACGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLDGFIQEPHSV*LVGGALPAEHA Trigger: TGCGTGTTCTGCAGGGAGGGCCCCGCCCACCAGGCACACACTGTGGGGTTCCTGGATGAAGCCATCCAACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS CCA 72 bp | ATGGCTTCATCCAGGAACCCCACAGTGTGTGCCTGGTaGGCGGGGCCCTCCCTGCAGAACACGCAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MASSRNPTVCAW*AGPSLQNTQSS Trigger: GCTGCTCTGCGTGTTCTGCAGGGAGGGCCCCGCCCACCAGGCACACACTGTGGGGTTCCTGGATGAAGCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS CCA 72 bp | TGGATGGCTTCATCCAGGAACCCCACAGTGTGTGCCTaGTGGGCGGGGCCCTCCCTGCAGAACACGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WMASSRNPTVCA*WAGPSLQNTQS Trigger: GCTCTGCGTGTTCTGCAGGGAGGGCCCCGCCCACCAGGCACACACTGTGGGGTTCCTGGATGAAGCCATCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS CCA 72 bp | GGAGGCAGAGTAGGCAGACAGTGTGTCCGCAGGCTGTaGTCACCGCATCCTGCAAGGGTCGGGTGCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: GGRVGRQCVRRL*SPHPARVGCRQ Trigger: CTGTCTGCACCCGACCCTTGCAGGATGCGGTGACCACAGCCTGCGGACACACTGTCTGCCTACTCTGCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS GCA 72 bp | CAGACAGTGTGTCCGCAGGCTGTGGTCACCGCATCCTaGAAGGGTCGGGTGCAGACAGGACAGGCTACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QTVCPQAVVTAS*KGRVQTGQATW Trigger: CCAAGTAGCCTGTCCTGTCTGCACCCGACCCTTGCAGGATGCGGTGACCACAGCCTGCGGACACACTGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS TCA 72 bp | AGTCTGGCATCTTGCAGAAGCTCACTTGCTGGTTGCTaGCACTTCTCCTCTAGCTCCTCCACCTGGGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: SLASCRSSLAGC*HFSSSSSTWVL Trigger: GAGTACCCAGGTGGAGGAGCTAGAGGAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAAGATGCCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS CCA 72 bp | TCTAGTTCCTCCAGCCTGTTCAGCAGGAGGCATCTCTaGTCCACAAGCTCCCGCTTCAGCCTTTCAAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSLFSRRHL*STSSRFSLSKA Trigger: TGCTTTTGAAAGGCTGAAGCGGGAGCTTGTGGACCAGAGATGCCTCCTGCTGAACAGGCTGGAGGAACTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS TCA 72 bp | GAGTCTCTTACTTGCAGAAGCTCACTTGCTGGTTGCTaGCACTTCTCCTCTAGCTCCTCCACCTGGGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: ESLTCRSSLAGC*HFSSSSSTWVL Trigger: GAGTACCCAGGTGGAGGAGCTAGAGGAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAAGTAAGAGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
||
| CDS CAA 72 bp | TCCTGGGAGACTTTGCTGATGTACTCTTCCCTCTCCTaGCAGATCTGCCGTTCTAGTTCCTCCAGCCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWETLLMYSSLS*QICRSSSSSLF Trigger: GAACAGGCTGGAGGAACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGTACATCAGCAAAGTCTCCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS CAA 72 bp | GTAGGGTTGTGGAGTCTCTTACTTGCAGAAGCTCACTaGCTGGTTGCTGACACTTCTCCTCTAGCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VGLWSLLLAEAH*LVADTSPLAPP Trigger: TGGAGGAGCTAGAGGAGAAGTGTCAGCAACCAGCAAGTGAGCTTCTGCAAGTAAGAGACTCCACAACCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173639.2 |
||
| CDS TCA 72 bp | GGCTCACAAAAGTCTTCAGCTCGTACCTGCTCTGATTaGGTCTGGCATCTTGCAGAAGCTCACTTGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GSQKSSARTCSD*VWHLAEAHLLV Trigger: AACCAGCAAGTGAGCTTCTGCAAGATGCCAGACTCAATCAGAGCAGGTACGAGCTGAAGACTTTTGTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS TCA 72 bp | TCTGGGCTCACAAAAGTCTTCAGCTCGTACCTGCTCTaGTTGAGTCTGGCATCTTGCAGAAGCTCACTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGLTKVFSSYLL*LSLASCRSSLA Trigger: AGCAAGTGAGCTTCTGCAAGATGCCAGACTCAATCAGAGCAGGTACGAGCTGAAGACTTTTGTGAGCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025329.13 ENSMUST00000174195.8 |
||
| CDS TCA 72 bp | AGCTCCCGCTTCAGCCTTTCAAAAGCAGCTTCTACCTaGTGCTTTTTGCTTTCAACCTGCATCAGAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRFSLSKAAST*CFLLSTCIRTS Trigger: GGAGGTTCTGATGCAGGTTGAAAGCAAAAAGCATCAGGTAGAAGCTGCTTTTGAAAGGCTGAAGCGGGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS TCA 72 bp | ACCTGCATCAGAACCTCCTGGAGCTTCTGGTCTTCTTaGCATTTCCTATCTTCTATCTTGTCCCTCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: TCIRTSWSFWSS*HFLSSILSLSI Trigger: AATGGAGAGGGACAAGATAGAAGATAGGAAATGTCAAGAAGACCAGAAGCTCCAGGAGGTTCTGATGCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
||
| CDS GCA 72 bp | TCAGCCTTTCAAAAGCAGCTTCTACCTGATGCTTTTTaGTTTCAACCTGCATCAGAACCTCCTGGAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SAFQKQLLPDAF*FQPASEPPGAS Trigger: AGAAGCTCCAGGAGGTTCTGATGCAGGTTGAAAGCAAAAAGCATCAGGTAGAAGCTGCTTTTGAAAGGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025329.13 ENSMUST00000173639.2 ENSMUST00000174195.8 |
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