Pregenerated sensors for TRIM14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039853Ensembl transcript IDs: ENSMUST00000046897.13, ENSMUST00000102924.3, ENSMUST00000184112.8
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTGGGTTCTGTCTGTCCTTCCGTGTCCACCACCTCCGTTTCAGTaGCAGGTGGTTCCCGCACTCACCTTCCTGACTTCCTTCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: GWVLSVLPCPPPPFQ*QVVPALTFLTSFCQ Trigger: CTGGCAGAAGGAAGTCAGGAAGGTGAGTGCGGGAACCACCTGCCACTGAAACGGAGGTGGTGGACACGGAAGGACAGACAGAACCCAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR TCA 90 bp | CCCCCAAGTCCAGTGGTCAGAGTTCAGTTCCCAGGTCCTTCCTGGTaGAAGGAGAAAGCAAGCCCTGGGGGCTGTCCTTGGATTTCCACG | + |
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Preference number: 1 (lower is better) Translates to: PPSPVVRVQFPGPSW*KEKASPGGCPWIST Trigger: CGTGGAAATCCAAGGACAGCCCCCAGGGCTTGCTTTCTCCTTTCACCAGGAAGGACCTGGGAACTGAACTCTGACCACTGGACTTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 90 bp | CTTTGCCAAGCCAGCATTTCCTGCCAGGCCTCCTTAGAGCTGGCTTaGTTGGGTTCTGTCTGTCCTTCCGTGTCCACCACCTCCGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: LCQASISCQASLELA*LGSVCPSVSTTSVS Trigger: TGAAACGGAGGTGGTGGACACGGAAGGACAGACAGAACCCAACCAAGCCAGCTCTAAGGAGGCCTGGCAGGAAATGCTGGCTTGGCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR GCA 90 bp | CCTTCTGCCAGCCATCATTTTAACGAGTTCTGTCTTCCTCTGCTGTaGAGGATGTTCCGGGCGGCTCTGTGTGCTCAGGAGAGGTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: PSASHHFNEFCLPLL*RMFRAALCAQERLR Trigger: CCTTAACCTCTCCTGAGCACACAGAGCCGCCCGGAACATCCTGCACAGCAGAGGAAGACAGAACTCGTTAAAATGATGGCTGGCAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 90 bp | GGTGTGGCAGGAGTTTATGGAGTATTTCAAGAAGAGAGCTCTCTCTaGCGAGGGGCTGGTTTTCAACAAGGCGCCTGGCTTGGTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: GVAGVYGVFQEESSL*RGAGFQQGAWLGAG Trigger: TCCAGCACCAAGCCAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTCTTGAAATACTCCATAAACTCCTGCCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 90 bp | CAGGATGTTCCGGGCGGCTCTGTGTGCTCAGGAGAGGTTAAGGTGTaGCAGGAGTTTATGGAGTATTTCAAGAAGAGAGCTCTCTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: QDVPGGSVCSGEVKV*QEFMEYFKKRALSG Trigger: GCCAGAGAGAGCTCTCTTCTTGAAATACTCCATAAACTCCTGCCACACCTTAACCTCTCCTGAGCACACAGAGCCGCCCGGAACATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR TCA 90 bp | GAGGGGAGGCCGAGAGCTCAGGTTTCAGCTACATCACCCTTTTCCTaGCACCGAGGTTCATCCATAGAACTTGAAGGAGCTGCTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: EGRPRAQVSATSPFS*HRGSSIELEGAASL Trigger: AAGAGAAGCAGCTCCTTCAAGTTCTATGGATGAACCTCGGTGTCAGGAAAAGGGTGATGTAGCTGAAACCTGAGCTCTCGGCCTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 90 bp | GAGGGACCCTGTCTCAAAAAGCAAACCAATAGACGGATGGATGGATaGATGACAGACGGACGGATGGATGGACAGACGGACAGAAGGATG | + |
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Preference number: 1 (lower is better) Translates to: EGPCLKKQTNRRMDG*MTDGRMDGQTDRRM Trigger: CATCCTTCTGTCCGTCTGTCCATCCATCCGTCCGTCTGTCATCCATCCATCCATCCGTCTATTGGTTTGCTTTTTGAGACAGGGTCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 90 bp | ACATTGGCCCTTGTAAAAAGGTGGGAAGCCGCATACGGTAGCTTGTaGTTGTCATCCAGCATTGGTAAGTTTAGGCAGGGGGATTGCCGT | + |
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Preference number: 1 (lower is better) Translates to: TLALVKRWEAAYGSL*LSSSIGKFRQGDCR Trigger: ACGGCAATCCCCCTGCCTAAACTTACCAATGCTGGATGACAACCACAAGCTACCGTATGCGGCTTCCCACCTTTTTACAAGGGCCAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 90 bp | AGTTTATGGAGTATTTCAAGAAGAGAGCTCTCTCTGGCGAGGGGCTaGTTTTCAACAAGGCGCCTGGCTTGGTGCTGGAGGAGTTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SLWSISRRELSLARG*FSTRRLAWCWRSLK Trigger: TTTCAAACTCCTCCAGCACCAAGCCAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTCTTGAAATACTCCATAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR TCA 90 bp | AGCTACATCACCCTTTTCCTGACACCGAGGTTCATCCATAGAACTTaGAGGAGCTGCTTCTCTTCCGTCATGGTAGGAGAGGGGGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: SYITLFLTPRFIHRT*RSCFSSVMVGEGVK Trigger: TTTTACCCCCTCTCCTACCATGACGGAAGAGAAGCAGCTCCTTCAAGTTCTATGGATGAACCTCGGTGTCAGGAAAAGGGTGATGTAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR GCA 90 bp | AGCTTGTGGTTGTCATCCAGCATTGGTAAGTTTAGGCAGGGGGATTaGCGTGAGTCCAAAACCAGCCTAGACTGTATAATGAGTTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SLWLSSSIGKFRQGD*RESKTSLDCIMSFR Trigger: TCTGAAACTCATTATACAGTCTAGGCTGGTTTTGGACTCACGGCAATCCCCCTGCCTAAACTTACCAATGCTGGATGACAACCACAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR GCA 90 bp | GTATGTAATAATAAGGTGGTCATAGTTGAACTCACCAGCAGTCCCTaGACTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: VCNNKVVIVELTSSP*TRERERERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGTGCAGGGACTGCTGGTGAGTTCAACTATGACCACCTTATTATTACATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGGAGGCAGGAGAATGAGTTCAGGCCGGCCTCAGCTACACAGTAAGCTTGAGCCGGGCGGCTCTGTGTaGTCAGGAGAGGTTAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GGGRRMSSGRPQLHSKLEPGGSV*SGEVKV Trigger: CACCTTAACCTCTCCTGAGCACACAGAGCCGCCCGG...CTCAAGCTTACTGTGTAGCTGAGGCCGGCCTGAACTCATTCTCCTGCCTCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCCCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGGCCCAGCCTGCAAGCTaGAAGCAATGCTGCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: PAPAFRSAGIKGVPYHSWAQPAS*KQCCFA Trigger: AGCAAAGCAGCATTGCTTCCAGCTTGCAGGCTGGGC...CCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGGGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCCCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGGTCCCCCAAGTCCAGTaGTCAGAGTTCAGTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PAPAFRSAGIKGVPYHSWVPQVQ*SEFSSQ Trigger: CTGGGAACTGAACTCTGACCACTGGACTTGGGGGAC...CCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGGGGCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CAA 90 bp | TGCCAAGCCAGCATTTCCTGCCAGGCCTCCTTAGAGCTGGCTTGGTaGGGTTCTGTCTGTCCTTCCGTGTCCACCACCTCCGTTTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: CQASISCQASLELAW*GSVCPSVSTTSVSV Trigger: CACTGAAACGGAGGTGGTGGACACGGAAGGACAGACAGAACCCAACCAAGCCAGCTCTAAGGAGGCCTGGCAGGAAATGCTGGCTTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CAA 90 bp | GCTTTGCCAAGCCAGCATTTCCTGCCAGGCCTCCTTAGAGCTGGCTaGGTTGGGTTCTGTCTGTCCTTCCGTGTCCACCACCTCCGTTTC | + |
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Preference number: 2 (lower is better) Translates to: ALPSQHFLPGLLRAG*VGFCLSFRVHHLRF Trigger: GAAACGGAGGTGGTGGACACGGAAGGACAGACAGAACCCAACCAAGCCAGCTCTAAGGAGGCCTGGCAGGAAATGCTGGCTTGGCAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTTGTCCCCCAAGTCCAGTGGTCAGAGTTCAGTTCCCAGGTCCTTCCTGGTAGACGGACAGAAGGATaGGGGGAGGCCGAGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SVVPQVQWSEFSSQVLPGRRTEG*GEAESS Trigger: TGAGCTCTCGGCCTCCCCTCATCCTTCTGTCCGTCT...ACCAGGAAGGACCTGGGAACTGAACTCTGACCACTGGACTTGGGGGACAACTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCACCACCTCCGTTTCAGTGGCAGGTGGTTCCCGCACTCACCTTCCTGACTTTCAACAAGGCGCCTaGCTTGGTGCTGGAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: VSTTSVSVAGGSRTHLPDFQQGA*LGAGGV Trigger: AACTCCTCCAGCACCAAGCCAGGCGCCTTGTTGAAA...GTCAGGAAGGTGAGTGCGGGAACCACCTGCCACTGAAACGGAGGTGGTGGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGAGGCAGGAGAATGAGTTCAGGCCGGCCTCAGCTACACAGTAAGCTTGAGTCTCTGGCGAGGGGCTaGTTTTCAACAAGGCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GGGRRMSSGRPQLHSKLESLARG*FSTRRL Trigger: CAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGA...CTCAAGCTTACTGTGTAGCTGAGGCCGGCCTGAACTCATTCTCCTGCCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCCCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGAGCTGGAAGCAATGCTaGTTTGCTGTGCTGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: PAPAFRSAGIKGVPYHSWSWKQC*FAVLET Trigger: GGTTTCCAGCACAGCAAAGCAGCATTGCTTCCAGCT...CCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGGGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGTACATACTGGGCAGCCCAGCCTaGAAGCTGGAAGCAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: PAFRSAGIKGVPYHSWYILGSPA*KLEAML Trigger: CAGCATTGCTTCCAGCTTGCAGGCTGGGCTGCCCAG...TATGTACCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCCCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGTCCTTAGAGCTGGCTTaGTTGGGTTCTGTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PAPAFRSAGIKGVPYHSWSLELA*LGSVCP Trigger: AGGACAGACAGAACCCAACCAAGCCAGCTCTAAGGA...CCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGGGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGAGGCAGGAGAATGAGTTCAGGCCGGCCTCAGCTACACAGTAAGCTTGAGGAAGCAATGCTGCTTTaGTGTGCTGGAAACCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: GGGRRMSSGRPQLHSKLEEAMLL*CAGNPA Trigger: AGCGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTC...CTCAAGCTTACTGTGTAGCTGAGGCCGGCCTGAACTCATTCTCCTGCCTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGTCCAGTGGTCAGAGTTCAGTTCCCAGGTCCTTCCTGGTGAAAGGAGAACGCCTGGCTTGGTGCTaGAGGAGTTTGAAAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PKSSGQSSVPRSFLVKGERLAWC*RSLKAG Trigger: GCCAGCTTTCAAACTCCTCCAGCACCAAGCCAGGCG...TTCTCCTTTCACCAGGAAGGACCTGGGAACTGAACTCTGACCACTGGACTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGTACATACAAGCCAGCATTTCCTaGCAGGCCTCCTTAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PAFRSAGIKGVPYHSWYIQASIS*QASLEL Trigger: CAGCTCTAAGGAGGCCTGGCAGGAAATGCTGGCTTG...TATGTACCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCCCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGCATAAAACACACCTCTaGCTTTGTGTTAGTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PAPAFRSAGIKGVPYHSWHKTHL*LCVSLP Trigger: TGGGAGACTAACACAAAGGCAGAGGTGTGTTTTATG...CCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGGGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGAGGCAGGAGAATGAGTTCAGGCCGGCCTCAGCTACACAGTAAGCTTGAGCCCTGTGTCCTCAGATaGTTCCTCAGAGATGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GGGRRMSSGRPQLHSKLEPCVLR*FLRDVS Trigger: AGAAACATCTCTGAGGAAGCATCTGAGGACACAGGG...CTCAAGCTTACTGTGTAGCTGAGGCCGGCCTGAACTCATTCTCCTGCCTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCCCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGTGTGGCAGGAGTTTATaGAGTATTTCAAGAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PAPAFRSAGIKGVPYHSWCGRSL*SISRRE Trigger: CTCTCTTCTTGAAATACTCCATAAACTCCTGCCACA...CCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGGGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCAAAACCAGCCTAGACTGTATAATGAGTTTCAGACCACTTAGAGCTACAAGGTGGCGTCTAGCCTaGGCAGCCCAGCCTGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: ESKTSLDCIMSFRPLRATRWRLA*AAQPAS Trigger: GCTTGCAGGCTGGGCTGCCCAGGCTAGACGCCACCT...TGTAGCTCTAAGTGGTCTGAAACTCATTATACAGTCTAGGCTGGTTTTGGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGAGGCAGGAGAATGAGTTCAGGCCGGCCTCAGCTACACAGTAAGCTTGAGAAGTTGATTTTGCTTTaGCAAGCCAGCATTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: GGGRRMSSGRPQLHSKLEKLILL*QASISC Trigger: GCAGGAAATGCTGGCTTGGCAAAGCAAAATCAACTT...CTCAAGCTTACTGTGTAGCTGAGGCCGGCCTGAACTCATTCTCCTGCCTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | TCACAGAGCCTCCTGCCCCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTGCAGGGCCTGTGAGATaGTTATCAATAATATCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SQSLLPLPFGVLGLKVCPAGPVR*LSIISV Trigger: AACTGATATTATTGATAAGCATCTCACAGGCCCTGC...AGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGGGGCAGGAGGCTCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGTACATAGCTGAGGGAAATGACTaGATAGAGAGCATTACTCTA | + |
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Preference number: 2 (lower is better) Translates to: PAFRSAGIKGVPYHSWYIAEGND*IESITL Trigger: TAGAGTAATGCTCTCTATTCAGTCATTTCCCTCAGC...TATGTACCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCCAAAACCAGCCTAGACTGTATAATGAGTTTCAGACCACTTAGAGCTACAAGGCGCCTGGCTTGGTaGTGGAGGAGTTTGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ESKTSLDCIMSFRPLRATRRLAW*WRSLKA Trigger: AGCTTTCAAACTCCTCCAGCACCAAGCCAGGCGCCT...TGTAGCTCTAAGTGGTCTGAAACTCATTATACAGTCTAGGCTGGTTTTGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTTTCGGAGTGCTGGGATTAAAGGTGTGCCCTACCACAGCTGGTACATAACAAAAGACTTAAGTTaGTTTTGCTTTGCCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PAFRSAGIKGVPYHSWYITKDLS*FCFAKP Trigger: TGGCTTGGCAAAGCAAAATCAACTTAAGTCTTTTGT...TATGTACCAGCTGTGGTAGGGCACACCTTTAATCCCAGCACTCCGAAAGGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCTTCCTCAGAGATGTTTCTAGAAATGGCTCTTAGGGTGGACTGTAGGGATGCGAACCAGAAAAAGTaGAAAGACCTCCCAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: DASSEMFLEMALRVDCRDANQKK*KDLPKC Trigger: ACACTTTGGGAGGTCTTTTCACTTTTTCTGGTTCGC...ATCCCTACAGTCCACCCTAAGAGCCATTTCTAGAAACATCTCTGAGGAAGCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCCAAAACCAGCCTAGACTGTATAATGAGTTTCAGACCACTTAGAGCTACATTCATCCATAGAACTTaGAGGAGCTGCTTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ESKTSLDCIMSFRPLRATFIHRT*RSCFSS Trigger: GGAAGAGAAGCAGCTCCTTCAAGTTCTATGGATGAA...TGTAGCTCTAAGTGGTCTGAAACTCATTATACAGTCTAGGCTGGTTTTGGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCAAAACCAGCCTAGACTGTATAATGAGTTTCAGACCACTTAGAGCTACAGGAGAGGTTAAGGTGTaGCAGGAGTTTATGGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: ESKTSLDCIMSFRPLRATGEVKV*QEFMEY Trigger: ATACTCCATAAACTCCTGCCACACCTTAACCTCTCC...TGTAGCTCTAAGTGGTCTGAAACTCATTATACAGTCTAGGCTGGTTTTGGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTTGGCTATATAGTAAGTTTAAGACTATCATGGGCTACAGGAGGCTCTGTCCACACCCAGCAAAAATaGTTAACCTTACTTGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: SLGYIVSLRLSWATGGSVHTQQK*LTLLGN Trigger: GTTTCCAAGTAAGGTTAAGCATTTTTGCTGGGTGTG...GACAGAGCCTCCTGTAGCCCATGATAGTCTTAAACTTACTATATAGCCAAGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| 3UTR GCA 72 bp | GCCTGGGCAGCCCAGCCTGCAAGCTGGAAGCAATGCTaGTTTGCTGTGCTGGAAACCCCGCTCGGAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: AWAAQPASWKQC*FAVLETPLGGS Trigger: GGAGCCTCCGAGCGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTCCAGCTTGCAGGCTGGGCTGCCCAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR GCA 72 bp | CTAGCCTGGGCAGCCCAGCCTGCAAGCTGGAAGCAATaGTGCTTTGCTGTGCTGGAAACCCCGCTCGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LAWAAQPASWKQ*CFAVLETPLGG Trigger: GCCTCCGAGCGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTCCAGCTTGCAGGCTGGGCTGCCCAGGCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR GCA 72 bp | GGCAGCCCAGCCTGCAAGCTGGAAGCAATGCTGCTTTaGTGTGCTGGAAACCCCGCTCGGAGGCTCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: GSPACKLEAMLL*CAGNPARRLLF Trigger: GAAGAGGAGCCTCCGAGCGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTCCAGCTTGCAGGCTGGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 72 bp | AGGTGGCGTCTAGCCTGGGCAGCCCAGCCTGCAAGCTaGAAGCAATGCTGCTTTGCTGTGCTGGAAACCCCG | + |
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Preference number: 3 (lower is better) Translates to: RWRLAWAAQPAS*KQCCFAVLETP Trigger: CGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTCCAGCTTGCAGGCTGGGCTGCCCAGGCTAGACGCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR GCA 72 bp | AGTTGGGAGGTGGCGTCTAGCCTGGGCAGCCCAGCCTaGAAGCTGGAAGCAATGCTGCTTTGCTGTGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SWEVASSLGSPA*KLEAMLLCCAG Trigger: TCCAGCACAGCAAAGCAGCATTGCTTCCAGCTTGCAGGCTGGGCTGCCCAGGCTAGACGCCACCTCCCAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 72 bp | CTAATAGTCCCAGCAGTTGGGAGGTGGCGTCTAGCCTaGGCAGCCCAGCCTGCAAGCTGGAAGCAATGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LIVPAVGRWRLA*AAQPASWKQCC Trigger: GCAGCATTGCTTCCAGCTTGCAGGCTGGGCTGCCCAGGCTAGACGCCACCTCCCAACTGCTGGGACTATTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| 3UTR CCA 72 bp | CTGTCTGTCCTTCCGTGTCCACCACCTCCGTTTCAGTaGCAGGTGGTTCCCGCACTCACCTTCCTGACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSVLPCPPPPFQ*QVVPALTFLTS Trigger: GGAAGTCAGGAAGGTGAGTGCGGGAACCACCTGCCACTGAAACGGAGGTGGTGGACACGGAAGGACAGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | GCCAGCATTTCCTGCCAGGCCTCCTTAGAGCTGGCTTaGTTGGGTTCTGTCTGTCCTTCCGTGTCCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: ASISCQASLELA*LGSVCPSVSTT Trigger: GGTGGTGGACACGGAAGGACAGACAGAACCCAACCAAGCCAGCTCTAAGGAGGCCTGGCAGGAAATGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR TCA 72 bp | CCAGTGGTCAGAGTTCAGTTCCCAGGTCCTTCCTGGTaGAAGGAGAAAGCAAGCCCTGGGGGCTGTCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PVVRVQFPGPSW*KEKASPGGCPW Trigger: CCAAGGACAGCCCCCAGGGCTTGCTTTCTCCTTTCACCAGGAAGGACCTGGGAACTGAACTCTGACCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR GCA 72 bp | CCCAGCCTGCAAGCTGGAAGCAATGCTGCTTTGCTGTaGTGGAAACCCCGCTCGGAGGCTCCTCTTCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: PSLQAGSNAALL*WKPRSEAPLHL Trigger: CAAATGAAGAGGAGCCTCCGAGCGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTCCAGCTTGCAGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | AGAGTGAAAAGACTAATAGTCCCAGCAGTTGGGAGGTaGCGTCTAGCCTGGGCAGCCCAGCCTGCAAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVKRLIVPAVGR*RLAWAAQPASW Trigger: CCAGCTTGCAGGCTGGGCTGCCCAGGCTAGACGCCACCTCCCAACTGCTGGGACTATTAGTCTTTTCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | GTAGTGGCCCCGCTTGGAACTCTAGCATTTGGAAGGTaGAGGCAGGAGAATGAGTTCAGGCCGGCCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VVAPLGTLAFGR*RQENEFRPASA Trigger: AGCTGAGGCCGGCCTGAACTCATTCTCCTGCCTCCACCTTCCAAATGCTAGAGTTCCAAGCGGGGCCACTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCAGTTGGGAGGTGGCGTCTAGCCTGGGCAGCCCAGCCTGCAAGCTGGAAGAGACTTAAGTTGATTTaGCTTTGCCAAGCCAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: PAVGRWRLAWAAQPASWKRLKLI*LCQASI Trigger: AATGCTGGCTTGGCAAAGCAAAATCAACTTAAGTCT...CTTCCAGCTTGCAGGCTGGGCTGCCCAGGCTAGACGCCACCTCCCAACTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR GCA 72 bp | CTGCCAGCCATCATTTTAACGAGTTCTGTCTTCCTCTaGTGTGCAGGATGTTCCGGGCGGCTCTGTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPAIILTSSVFL*CAGCSGRLCVL Trigger: GAGCACACAGAGCCGCCCGGAACATCCTGCACAGCAGAGGAAGACAGAACTCGTTAAAATGATGGCTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR GCA 72 bp | GCACGTCCACCTGGTTTATTTCAGTTTCATATACCGTaGTGCCAAGCCAGGGTTGGTAGTGGCCCCGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ARPPGLFQFHIP*CQARVGSGPAW Trigger: CCAAGCGGGGCCACTACCAACCCTGGCTTGGCAGCACGGTATATGAAACTGAAATAAACCAGGTGGACGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | AGTATTTCAAGAAGAGAGCTCTCTCTGGCGAGGGGCTaGTTTTCAACAAGGCGCCTGGCTTGGTGCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SISRRELSLARG*FSTRRLAWCWR Trigger: CCTCCAGCACCAAGCCAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTCTTGAAATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | AGCCTGCAAGCTGGAAGCAATGCTGCTTTGCTGTGCTaGAAACCCCGCTCGGAGGCTCCTCTTCATTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLQAGSNAALLC*KPRSEAPLHLF Trigger: AAACAAATGAAGAGGAGCCTCCGAGCGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTCCAGCTTGCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | CCGGGCGGCTCTGTGTGCTCAGGAGAGGTTAAGGTGTaGCAGGAGTTTATGGAGTATTTCAAGAAGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGGSVCSGEVKV*QEFMEYFKKRA Trigger: AGCTCTCTTCTTGAAATACTCCATAAACTCCTGCCACACCTTAACCTCTCCTGAGCACACAGAGCCGCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTTCCTCAGAGATGTTTCTAGAAATGGCTCTTAGGGTGGACTGTAGGGATGGAAGCAATGCTGCTTaGCTGTGCTGGAAACCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: DASSEMFLEMALRVDCRDGSNAA*LCWKPR Trigger: GCGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTCC...ATCCCTACAGTCCACCCTAAGAGCCATTTCTAGAAACATCTCTGAGGAAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTTCCTCAGAGATGTTTCTAGAAATGGCTCTTAGGGTGGACTGTAGGGATCCCTGGGGGCTGTCCTaGGATTTCCACGTAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: DASSEMFLEMALRVDCRDPWGLS*DFHVAT Trigger: TGTAGCTACGTGGAAATCCAAGGACAGCCCCCAGGG...ATCCCTACAGTCCACCCTAAGAGCCATTTCTAGAAACATCTCTGAGGAAGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | CTCTTCATTTGTTTGAGGCTAGTTTTCCGGCTAGCCTaGGGCAGTGAGACAGAGACGGGTAGGAGTACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFICLRLVFRLA*GSETETGRSTF Trigger: AAAGGTACTCCTACCCGTCTCTGTCTCACTGCCCCAGGCTAGCCGGAAAACTAGCCTCAAACAAATGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | CTGTCCTTGGATTTCCACGTAGCTACACGTGCGCCGTaGCCCTCATGCCATGCTGCTTTAAGTAAACACATA | + |
|
Preference number: 3 (lower is better) Translates to: LSLDFHVATRAP*PSCHAALSKHI Trigger: TATGTGTTTACTTAAAGCAGCATGGCATGAGGGCCACGGCGCACGTGTAGCTACGTGGAAATCCAAGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR TCA 72 bp | ACCCTTTTCCTGACACCGAGGTTCATCCATAGAACTTaGAGGAGCTGCTTCTCTTCCGTCATGGTAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TLFLTPRFIHRT*RSCFSSVMVGE Trigger: CTCTCCTACCATGACGGAAGAGAAGCAGCTCCTTCAAGTTCTATGGATGAACCTCGGTGTCAGGAAAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR TCA 72 bp | CCGAGAGCTCAGGTTTCAGCTACATCACCCTTTTCCTaGCACCGAGGTTCATCCATAGAACTTGAAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRAQVSATSPFS*HRGSSIELEGA Trigger: AGCTCCTTCAAGTTCTATGGATGAACCTCGGTGTCAGGAAAAGGGTGATGTAGCTGAAACCTGAGCTCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR GCA 72 bp | CTTAAGTTGATTTTGCTTTGCCAAGCCAGCATTTCCTaGCAGGCCTCCTTAGAGCTGGCTTGGTTGGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LKLILLCQASIS*QASLELAWLGS Trigger: AGAACCCAACCAAGCCAGCTCTAAGGAGGCCTGGCAGGAAATGCTGGCTTGGCAAAGCAAAATCAACTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | CTTGTAAAAAGGTGGGAAGCCGCATACGGTAGCTTGTaGTTGTCATCCAGCATTGGTAAGTTTAGGCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LVKRWEAAYGSL*LSSSIGKFRQG Trigger: CCCCTGCCTAAACTTACCAATGCTGGATGACAACCACAAGCTACCGTATGCGGCTTCCCACCTTTTTACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCCAAAACCAGCCTAGACTGTATAATGAGTTTCAGACCACTTAGAGCTACAAACAAGGCGCCTGGCTaGGTGCTGGAGGAGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ESKTSLDCIMSFRPLRATNKAPG*VLEEFE Trigger: TTCAAACTCCTCCAGCACCAAGCCAGGCGCCTTGTT...TGTAGCTCTAAGTGGTCTGAAACTCATTATACAGTCTAGGCTGGTTTTGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR GCA 72 bp | TTGTCATCCAGCATTGGTAAGTTTAGGCAGGGGGATTaGCGTGAGTCCAAAACCAGCCTAGACTGTATAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSSSIGKFRQGD*RESKTSLDCIM Trigger: CATTATACAGTCTAGGCTGGTTTTGGACTCACGGCAATCCCCCTGCCTAAACTTACCAATGCTGGATGACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | TGCTTATCAATAATATCAGTTGTCCCCCAAGTCCAGTaGTCAGAGTTCAGTTCCCAGGTCCTTCCTGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CLSIISVVPQVQ*SEFSSQVLPGE Trigger: TTCACCAGGAAGGACCTGGGAACTGAACTCTGACCACTGGACTTGGGGGACAACTGATATTATTGATAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR TCA 72 bp | GAGACGGGTAGGAGTACCTTTACAAAAGACTTAAGTTaGTTTTGCTTTGCCAAGCCAGCATTTCCTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETGRSTFTKDLS*FCFAKPAFPAR Trigger: CCTGGCAGGAAATGCTGGCTTGGCAAAGCAAAATCAACTTAAGTCTTTTGTAAAGGTACTCCTACCCGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR TCA 72 bp | AAATACACGAGACTGACTCAAAACAAGACACCAAGATaGGTCTTGCCCTGTGTCCTCAGATGCTTCCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KYTRLTQNKTPR*VLPCVLRCFLR Trigger: TCTGAGGAAGCATCTGAGGACACAGGGCAAGACTCATCTTGGTGTCTTGTTTTGAGTCAGTCTCGTGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR GCA 72 bp | TGTGCCCTACCACAGCTGGTACATAAAACACACCTCTaGCTTTGTGTTAGTCTCCCAGACTTCCGAATATAT | + |
|
Preference number: 3 (lower is better) Translates to: CALPQLVHKTHL*LCVSLPDFRIY Trigger: ATATATTCGGAAGTCTGGGAGACTAACACAAAGGCAGAGGTGTGTTTTATGTACCAGCTGTGGTAGGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | TTAGGGTGGACTGTAGGGATGTGCTTTTACTGTCTTTaGATGAGTTTCTCACACGCGTGCACATGTATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LGWTVGMCFYCL*MSFSHACTCMY Trigger: ATACATACATGTGCACGCGTGTGAGAAACTCATCCAAAGACAGTAAAAGCACATCCCTACAGTCCACCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CCA 72 bp | TCTAGCCTTGGCTATATAGTAAGTTTAAGACTATCATaGGCTACAGGAGGCTCTGTCTCAAAAACAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLGYIVSLRLS*ATGGSVSKTKA Trigger: TGCCTTTGTTTTTGAGACAGAGCCTCCTGTAGCCCATGATAGTCTTAAACTTACTATATAGCCAAGGCTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| 3UTR CAA 72 bp | GGGCAGCCCAGCCTGCAAGCTGGAAGCAATGCTGCTTaGCTGTGCTGGAAACCCCGCTCGGAGGCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQPSLQAGSNAA*LCWKPRSEAPL Trigger: AAGAGGAGCCTCCGAGCGGGGTTTCCAGCACAGCAAAGCAGCATTGCTTCCAGCTTGCAGGCTGGGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| CDS-3UTR TCA 90 bp | AATAGTCCCAGCAGTTGGGAGGTGGCGTCTAGCCTGGGCAGCCCAGCCTGCAAGTATGTCTGCAGCAGCTaGACAGGGTTGGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSPSSWEVASSLGSPACKYVCSS*TGLGSW Trigger: CCAGGAGCCCAACCCTGTTCAGCTGCTGCAGACATA...CTTGCAGGCTGGGCTGCCCAGGCTAGACGCCACCTCCCAACTGCTGGGACTATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| CDS-3UTR CCA 90 bp | GAGATCTCCCTGCCTGAGCCTCTAAGCACTGGGTCTAAAGCCTGTGTGGGATCAACAGGGTTGGGCTCCTaGCCAATGCCCCACACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EISLPEPLSTGSKACVGSTGLGS*PMPHTL Trigger: CAGGGTGTGGGGCATTGGCCAGGAGCCCAACCCTGT...TGATCCCACACAGGCTTTAGACCCAGTGCTTAGAGGCTCAGGCAGGGAGATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTTGTCCCCCAAGTCCAGTGGTCAGAGTTCAGTTCCCAGGTCCTTCCTGGTACAGGGTTGGGCTCCTaGCCAATGCCCCACACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVVPQVQWSEFSSQVLPGTGLGS*PMPHTL Trigger: CAGGGTGTGGGGCATTGGCCAGGAGCCCAACCCTGT...ACCAGGAAGGACCTGGGAACTGAACTCTGACCACTGGACTTGGGGGACAACTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| 3UTR CAA 72 bp | AGCCAGCATTTCCTGCCAGGCCTCCTTAGAGCTGGCTaGGTTGGGTTCTGTCTGTCCTTCCGTGTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQHFLPGLLRAG*VGFCLSFRVHH Trigger: GTGGTGGACACGGAAGGACAGACAGAACCCAACCAAGCCAGCTCTAAGGAGGCCTGGCAGGAAATGCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| CDS-3UTR TCA 90 bp | GAGATCTCCCTGCCTGAGCCTCTAAGCACTGGGTCTAAAGCCTGTGTGGGATCAGGTACACCTGGAGGGTaGGCTGTGTGCTTTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EISLPEPLSTGSKACVGSGTPGG*AVCFCQ Trigger: TTGACAAAAGCACACAGCTCACCCTCCAGGTGTACC...TGATCCCACACAGGCTTTAGACCCAGTGCTTAGAGGCTCAGGCAGGGAGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR TCA 90 bp | ATAGTTGAACTCACCAGCAGTCCCTGCACTAGAGAGAGAGAGAGAGAGAGAGAGTATGCCTGCAGCAGCTaGACAGGGTTGGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVELTSSPCTREREREREYACSS*TGLGSW Trigger: CCAGGAGCCCAACCCTGTTCAGCTGCTGCAGGCATA...CTCTCTCTCTCTCTCTCTCTCTCTAGTGCAGGGACTGCTGGTGAGTTCAACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| 3UTR CAA 72 bp | AAGCCGCATACGGTAGCTTGTGGTTGTCATCCAGCATaGGTAAGTTTAGGCAGGGGGATTGCCGTGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPHTVACGCHPA*VSLGRGIAVSP Trigger: TGGACTCACGGCAATCCCCCTGCCTAAACTTACCAATGCTGGATGACAACCACAAGCTACCGTATGCGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTTGAACTCACCAGCAGTCCCTGCACTAGAGAGAGAGAGAGAGAGAGAGAGTTTCAACAAGGCGCCTaGCTTGGTGCTGGAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IVELTSSPCTREREREREFQQGA*LGAGGV Trigger: AACTCCTCCAGCACCAAGCCAGGCGCCTTGTTGAAA...CTCTCTCTCTCTCTCTCTCTCTCTAGTGCAGGGACTGCTGGTGAGTTCAACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCGCTTATGACTCTAGGAATTAAACCCAGACATGCCTCACACACACCATCTCTGGCGAGGGGCTaGTTTTCAACAAGGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLMTLGIKPRHASHTPSLARG*FSTRRL Trigger: CAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGA...TGGTGTGTGTGAGGCATGTCTGGGTTTAATTCCTAGAGTCATAAGCGAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR GCA 90 bp | ACTCACCTTCCTGACTTCCTTCTGCCAGCCATCATTTTAACGAGTTCTGTCTTCTCCTGGATTAGCTTCTaGACACGCACAGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THLPDFLLPAIILTSSVFSWISF*TRTASS Trigger: GGAGGAGGCTGTGCGTGTGCAGAAGCTAATCCAGGA...GAAGACAGAACTCGTTAAAATGATGGCTGGCAGAAGGAAGTCAGGAAGGTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| CDS-3UTR GCA 90 bp | TACCATGTTGTATGTAATAATAAGGTGGTCATAGTTGAACTCACCAGCAGTCCCGCCCCCATCCACCTTTaGTCCCACCCTACCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YHVVCNNKVVIVELTSSPAPIHL*SHPTSL Trigger: GAGGGAGGTAGGGTGGGAGCAAAGGTGGATGGGGGC...GGGACTGCTGGTGAGTTCAACTATGACCACCTTATTATTACATACAACATGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR TCA 90 bp | ACTCACCTTCCTGACTTCCTTCTGCCAGCCATCATTTTAACGAGTTCTGTCTTCGGTACACCTGGAGGGTaGGCTGTGTGCTTTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: THLPDFLLPAIILTSSVFGTPGG*AVCFCQ Trigger: TTGACAAAAGCACACAGCTCACCCTCCAGGTGTACC...GAAGACAGAACTCGTTAAAATGATGGCTGGCAGAAGGAAGTCAGGAAGGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCAAGAAGAGAGCTCTCTCTGGCGAGGGGCTGGTTTTCAACAAGGCGCCTATGTTGTCCGCATGTTaGCTCTTCTTGGTTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFKKRALSGEGLVFNKAPMLSAC*LFLVAK Trigger: TTTGGCAACCAAGAAGAGGCAACATGCGGACAACAT...AGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTCTTGAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| CDS-3UTR CCA 90 bp | GGATCACACACCCAGCAAAAATGCTTAACCTTACTTGGAAACAGTCTCTTAACACGCCTGGCTTGGTGCTaGAGGAGTTTGAAAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSHTQQKCLTLLGNSLLTRLAWC*RSLKAG Trigger: GCCAGCTTTCAAACTCCTCCAGCACCAAGCCAGGCG...TGTTAAGAGACTGTTTCCAAGTAAGGTTAAGCATTTTTGCTGGGTGTGTGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGGATCACACACCCAGCAAAAATGCTTAACCTTACTTGGAAACAGTCTCGAAGAGAGCTCTCTCTaGCGAGGGGCTGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CVGSHTQQKCLTLLGNSLEESSL*RGAGFQ Trigger: TTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTC...GAGACTGTTTCCAAGTAAGGTTAAGCATTTTTGCTGGGTGTGTGATCCCACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR GCA 90 bp | TACCATGTTGTATGTAATAATAAGGTGGTCATAGTTGAACTCACCAGCAGTCCCTCCTGGATTAGCTTCTaGACACGCACAGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YHVVCNNKVVIVELTSSPSWISF*TRTASS Trigger: GGAGGAGGCTGTGCGTGTGCAGAAGCTAATCCAGGA...GGGACTGCTGGTGAGTTCAACTATGACCACCTTATTATTACATACAACATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR GCA 90 bp | TACCATGTTGTATGTAATAATAAGGTGGTCATAGTTGAACTCACCAGCAGTCCCAGGCGCCTGGCTTGGTaGTGGAGGAGTTTGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YHVVCNNKVVIVELTSSPRRLAW*WRSLKA Trigger: AGCTTTCAAACTCCTCCAGCACCAAGCCAGGCGCCT...GGGACTGCTGGTGAGTTCAACTATGACCACCTTATTATTACATACAACATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR CCA 90 bp | ATAGTTGAACTCACCAGCAGTCCCTGCACTAGAGAGAGAGAGAGAGAGAGAGAGGAGGAGTTTGAAAGCTaGCAGTTTATGTTTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVELTSSPCTREREREREEEFES*QFMFSF Trigger: GAAGGAAAACATAAACTGCCAGCTTTCAAACTCCTC...CTCTCTCTCTCTCTCTCTCTCTCTAGTGCAGGGACTGCTGGTGAGTTCAACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| 3UTR CAA 72 bp | CTTAGGGTGGACTGTAGGGATGTGCTTTTACTGTCTTaGGATGAGTTTCTCACACGCGTGCACATGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRVDCRDVLLLS*DEFLTRVHMYV Trigger: TACATACATGTGCACGCGTGTGAGAAACTCATCCAAAGACAGTAAAAGCACATCCCTACAGTCCACCCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTATGTAATAATAAGGTGGTCATAGTTGAACTCACCAGCAGTCCCTGCACTGGTGCTGGAGGAGTTTaGAAGCTGGCAGTTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVCNNKVVIVELTSSPCTGAGGV*KLAVYV Trigger: AACATAAACTGCCAGCTTTCAAACTCCTCCAGCACC...AGTGCAGGGACTGCTGGTGAGTTCAACTATGACCACCTTATTATTACATACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTTGGCTATATAGTAAGTTTAAGACTATCATGGGCTACAGGAGGCTCTGTCATGTTGTCCGCATGTTaGCTCTTCTTGGTTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLGYIVSLRLSWATGGSVMLSAC*LFLVAK Trigger: TTTGGCAACCAAGAAGAGGCAACATGCGGACAACAT...GACAGAGCCTCCTGTAGCCCATGATAGTCTTAAACTTACTATATAGCCAAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS-3UTR GCA 90 bp | GGATCACACACCCAGCAAAAATGCTTAACCTTACTTGGAAACAGTCTCTTAACACTTGGTGGCTATATATaGCTGCAGCAGCTGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHTQQKCLTLLGNSLLTLGGYI*LQQLNR Trigger: CCTGTTCAGCTGCTGCAGGCATATATAGCCACCAAG...TGTTAAGAGACTGTTTCCAAGTAAGGTTAAGCATTTTTGCTGGGTGTGTGATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS-3UTR CCA 90 bp | GTTGTATGTAATAATAAGGTGGTCATAGTTGAACTCACCAGCAGTCCCTGCACTGTCCCATCTCTGTCTTaGTGGCTATATATGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVCNNKVVIVELTSSPCTVPSLS*WLYMPA Trigger: TGCAGGCATATATAGCCACCAAGACAGAGATGGGAC...AGTGCAGGGACTGCTGGTGAGTTCAACTATGACCACCTTATTATTACATACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS CCA 90 bp | AGCTTCTGCACACGCACAGCCTCCTCCTCGGCCAGGCCCACCGGGTaGCCGCGGTGCGCACCCAGAACCGGGCAGAGCGCGCACACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SFCTRTASSSARPTG*PRCAPRTGQSAHTQ Trigger: CTGTGTGTGCGCGCTCTGCCCGGTTCTGGGTGCGCACCGCGGCCACCCGGTGGGCCTGGCCGAGGAGGAGGCTGTGCGTGTGCAGAAGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS GCA 90 bp | GAGCAGCGGACTGTCAGACCGTCCGGCGACAGGCGCAGGCGCGCGTaGATCGTGTCCGGGTCCAGCGTTGGCGTACGGGCGTATTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQRTVRPSGDRRRRA*IVSGSSVGVRAYFK Trigger: CTTGAAATACGCCCGTACGCCAACGCTGGACCCGGACACGATGCACGCGCGCCTGCGCCTGTCGCCGGACGGTCTGACAGTCCGCTGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS CCA 90 bp | CGGCGACAGGCGCAGGCGCGCGTGCATCGTGTCCGGGTCCAGCGTTaGCGTACGGGCGTATTTCAAGAAGAGAGCTCTCTCTGGCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRQAQARVHRVRVQR*RTGVFQEESSLWRG Trigger: CCCTCGCCAGAGAGAGCTCTCTTCTTGAAATACGCCCGTACGCCAACGCTGGACCCGGACACGATGCACGCGCGCCTGCGCCTGTCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS CCA 90 bp | GGGCAACCTAGGGATGCTGATGGGCCCCTCCCAGAGGCGCAGGGCTaGATAGAGCGGCTCCTGGAAGGCGGCGTGGAAGGTGTGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQPRDADGPLPEAQG*IERLLEGGVEGVQV Trigger: CACTTGCACACCTTCCACGCCGCCTTCCAGGAGCCGCTCTATCCAGCCCTGCGCCTCTGGGAGGGGCCCATCAGCATCCCTAGGTTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS GCA 90 bp | TCGAAGGACAGGGGCACAGGGTGGCTCAGCTCCGAGGGGCTCATCTaGTGTCCCATCTCTGTCTTGGTGGCTATATATGCCTGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKDRGTGWLSSEGLI*CPISVLVAIYACSS Trigger: GCTGCTGCAGGCATATATAGCCACCAAGACAGAGATGGGACAGCAGATGAGCCCCTCGGAGCTGAGCCACCCTGTGCCCCTGTCCTTCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CCA 90 bp | GGCTCAGCTCCGAGGGGCTCATCTGCTGTCCCATCTCTGTCTTGGTaGCTATATATGCCTGCAGCAGCTGAACAGGGTTGGGCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSAPRGSSAVPSLSW*LYMPAAAEQGWAPG Trigger: GCCAGGAGCCCAACCCTGTTCAGCTGCTGCAGGCATATATAGCCACCAAGACAGAGATGGGACAGCAGATGAGCCCCTCGGAGCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS GCA 90 bp | CGAGGGGCTCATCTGCTGTCCCATCTCTGTCTTGGTGGCTATATATaGCTGCAGCAGCTGAACAGGGTTGGGCTCCTGGCCAATGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGAHLLSHLCLGGYI*LQQLNRVGLLANAP Trigger: TGGGGCATTGGCCAGGAGCCCAACCCTGTTCAGCTGCTGCAGGCATATATAGCCACCAAGACAGAGATGGGACAGCAGATGAGCCCCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CCA 90 bp | GGTGGCTCAGCTCCGAGGGGCTCATCTGCTGTCCCATCTCTGTCTTaGTGGCTATATATGCCTGCAGCAGCTGAACAGGGTTGGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGSAPRGSSAVPSLS*WLYMPAAAEQGWAP Trigger: AGGAGCCCAACCCTGTTCAGCTGCTGCAGGCATATATAGCCACCAAGACAGAGATGGGACAGCAGATGAGCCCCTCGGAGCTGAGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CCA 90 bp | GTCCAGCGTTGGCGTACGGGCGTATTTCAAGAAGAGAGCTCTCTCTaGCGAGGGGCTGGTTTTCAACAAGGCGCCTGGCTTGGTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VQRWRTGVFQEESSL*RGAGFQQGAWLGAG Trigger: TCCAGCACCAAGCCAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTCTTGAAATACGCCCGTACGCCAACGCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS-3UTR CAA 90 bp | CCAGCAGTTGGGAGGTGGCGTCTAGCCTGGGCAGCCCAGCCTGCAAGCTGGAAGTATGTTGTCCGCATGTaGCCTCTTCTTGGTTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PAVGRWRLAWAAQPASWKYVVRM*PLLGCQ Trigger: TTGGCAACCAAGAAGAGGCAACATGCGGACAACATA...CTTCCAGCTTGCAGGCTGGGCTGCCCAGGCTAGACGCCACCTCCCAACTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| CDS TCA 90 bp | TGCTGTCCCATCTCTGTCTTGGTGGCTATATATGCCTGCAGCAGCTaGACAGGGTTGGGCTCCTGGCCAATGCCCCACACCCTGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CCPISVLVAIYACSS*TGLGSWPMPHTLVE Trigger: CTCTACCAGGGTGTGGGGCATTGGCCAGGAGCCCAACCCTGTTCAGCTGCTGCAGGCATATATAGCCACCAAGACAGAGATGGGACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS GCA 90 bp | CCAATGCCCCACACCCTGGTAGAGAAGTCATCCATGACCTCAATCTaGTTCCCACAAGTCTCGGCTTGCTCCCGGTACACCTGGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PMPHTLVEKSSMTSI*FPQVSACSRYTWRV Trigger: CACCCTCCAGGTGTACCGGGAGCAAGCCGAGACTTGTGGGAAGCAGATTGAGGTCATGGATGACTTCTCTACCAGGGTGTGGGGCATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS CCA 90 bp | GCGTACGGGCGTATTTCAAGAAGAGAGCTCTCTCTGGCGAGGGGCTaGTTTTCAACAAGGCGCCTGGCTTGGTGCTGGAGGAGTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AYGRISRRELSLARG*FSTRRLAWCWRSLK Trigger: TTTCAAACTCCTCCAGCACCAAGCCAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTCTTGAAATACGCCCGTACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS GCA 90 bp | GAGAAGTCATCCATGACCTCAATCTGCTTCCCACAAGTCTCGGCTTaGTCCCGGTACACCTGGAGGGTGAGCTGTGTGCTTTTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EKSSMTSICFPQVSA*SRYTWRVSCVLLSM Trigger: CATTGACAAAAGCACACAGCTCACCCTCCAGGTGTACCGGGAGCAAGCCGAGACTTGTGGGAAGCAGATTGAGGTCATGGATGACTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS-3UTR CAA 90 bp | ATAGTTGAACTCACCAGCAGTCCCTGCACTAGAGAGAGAGAGAGAGAGAGAGAGAACAAGGCGCCTGGCTaGGTGCTGGAGGAGTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IVELTSSPCTRERERERENKAPG*VLEEFE Trigger: TTCAAACTCCTCCAGCACCAAGCCAGGCGCCTTGTT...CTCTCTCTCTCTCTCTCTCTCTCTAGTGCAGGGACTGCTGGTGAGTTCAACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS CCA 90 bp | GTTTTCAACAAGGCGCCTGGCTTGGTGCTGGAGGAGTTTGAAAGCTaGCAGTTTATGTTTTCCTTCAGGCGAGTGTCCATTGGTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VFNKAPGLVLEEFES*QFMFSFRRVSIGVC Trigger: GCAGACACCAATGGACACTCGCCTGAAGGAAAACATAAACTGCCAGCTTTCAAACTCCTCCAGCACCAAGCCAGGCGCCTTGTTGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS-3UTR CAA 90 bp | TCAGTTGTCCCCCAAGTCCAGTGGTCAGAGTTCAGTTCCCAGGTCCTTCCTGGTGCATGTTGCCTCTTCTaGGTTGCCAAACACTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVVPQVQWSEFSSQVLPGACCLF*VAKHSK Trigger: TTTAGAGTGTTTGGCAACCAAGAAGAGGCAACATGC...ACCAGGAAGGACCTGGGAACTGAACTCTGACCACTGGACTTGGGGGACAACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184112.8 |
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| CDS-3UTR CAA 90 bp | TATATAGTAAGTTTAAGACTATCATGGGCTACAGGAGGCTCTGTCTCAAAAACAGGCCCCCATCCACCTTaGCTCCCACCCTACCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YIVSLRLSWATGGSVSKTGPHPP*LPPYLP Trigger: AGGGAGGTAGGGTGGGAGCAAAGGTGGATGGGGGCC...TGTTTTTGAGACAGAGCCTCCTGTAGCCCATGATAGTCTTAAACTTACTATATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS GCA 90 bp | AGCTGGCAGTTTATGTTTTCCTTCAGGCGAGTGTCCATTGGTGTCTaGAACGTGTTCCCGATGGCTTCCACAAACTCCTTAAAGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWQFMFSFRRVSIGV*NVFPMASTNSLKKF Trigger: GAACTTCTTTAAGGAGTTTGTGGAAGCCATCGGGAACACGTTGCAGACACCAATGGACACTCGCCTGAAGGAAAACATAAACTGCCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS-3UTR CAA 90 bp | AGCCTTGGCTATATAGTAAGTTTAAGACTATCATGGGCTACAGGAGGCTCTGTCTCCTTAAAGAAGTTCTaGACAGGCTCGAAGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGYIVSLRLSWATGGSVSLKKF*TGSKDR Trigger: CCTGTCCTTCGAGCCTGTCAAGAACTTCTTTAAGGA...GACAGAGCCTCCTGTAGCCCATGATAGTCTTAAACTTACTATATAGCCAAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS-3UTR CAA 90 bp | GTTGTATGTAATAATAAGGTGGTCATAGTTGAACTCACCAGCAGTCCCTGCACTTATGTTGTCCGCATGTaGCCTCTTCTTGGTTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VVCNNKVVIVELTSSPCTYVVRM*PLLGCQ Trigger: TTGGCAACCAAGAAGAGGCAACATGCGGACAACATA...AGTGCAGGGACTGCTGGTGAGTTCAACTATGACCACCTTATTATTACATACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGGAGGATCAGGAGTTCAAGTCTAGCCTTGGCTATATAGTAAGTTTAAGATGGTGCTGGAGGAGTTaGAAAGCTGGCAGTTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: KQEDQEFKSSLGYIVSLRWCWRS*KAGSLC Trigger: ACATAAACTGCCAGCTTTCAAACTCCTCCAGCACCA...TCTTAAACTTACTATATAGCCAAGGCTAGACTTGAACTCCTGATCCTCCTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS-3UTR CAA 90 bp | TACCATGTTGTATGTAATAATAAGGTGGTCATAGTTGAACTCACCAGCAGTCCCGCATGTTGCCTCTTCTaGGTTGCCAAACACTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YHVVCNNKVVIVELTSSPACCLF*VAKHSK Trigger: TTTAGAGTGTTTGGCAACCAAGAAGAGGCAACATGC...GGGACTGCTGGTGAGTTCAACTATGACCACCTTATTATTACATACAACATGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS-3UTR CAA 90 bp | AGCCTTGGCTATATAGTAAGTTTAAGACTATCATGGGCTACAGGAGGCTCTGTCTTGTCAATGAATTTTTaGGCCAGTACTTCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGYIVSLRLSWATGGSVLSMNF*ASTSSS Trigger: TGAAGAGGAAGTACTGGCCAAAAAATTCATTGACAA...GACAGAGCCTCCTGTAGCCCATGATAGTCTTAAACTTACTATATAGCCAAGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS CCA 72 bp | ACACGCACAGCCTCCTCCTCGGCCAGGCCCACCGGGTaGCCGCGGTGCGCACCCAGAACCGGGCAGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TRTASSSARPTG*PRCAPRTGQSA Trigger: CGCGCTCTGCCCGGTTCTGGGTGCGCACCGCGGCCACCCGGTGGGCCTGGCCGAGGAGGAGGCTGTGCGTGT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS GCA 72 bp | CAGCGGCGACAGAAGAGCTCAGCCGGGCGTTCGCTGTaGTCCGGACAGCGCCAGCCATACGCCCCGTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRRQKSSAGRSL*SGQRQPYAPSG Trigger: GCCCGACGGGGCGTATGGCTGGCGCTGTCCGGAGCACAGCGAACGCCCGGCTGAGCTCTTCTGTCGCCGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS GCA 72 bp | ACTGTCAGACCGTCCGGCGACAGGCGCAGGCGCGCGTaGATCGTGTCCGGGTCCAGCGTTGGCGTACGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TVRPSGDRRRRA*IVSGSSVGVRA Trigger: CGCCCGTACGCCAACGCTGGACCCGGACACGATGCACGCGCGCCTGCGCCTGTCGCCGGACGGTCTGACAGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS CAA 90 bp | CCGGCGACAGGCGCAGGCGCGCGTGCATCGTGTCCGGGTCCAGCGTaGGCGTACGGGCGTATTTCAAGAAGAGAGCTCTCTCTGGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PATGAGARASCPGPA*AYGRISRRELSLAR Trigger: CCTCGCCAGAGAGAGCTCTCTTCTTGAAATACGCCCGTACGCCAACGCTGGACCCGGACACGATGCACGCGCGCCTGCGCCTGTCGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS GCA 72 bp | CCTGGAAGGCGGCGTGGAAGGTGTGCAAGTGGCTCATaGCACCCGCCACGTCGTAGAAGGCCAGAATGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGRRRGRCASGS*HPPRRRRPECR Trigger: CCGGCATTCTGGCCTTCTACGACGTGGCGGGTGGCATGAGCCACTTGCACACCTTCCACGCCGCCTTCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS CCA 72 bp | GCGCAGGCGCGCGTGCATCGTGTCCGGGTCCAGCGTTaGCGTACGGGCGTATTTCAAGAAGAGAGCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AQARVHRVRVQR*RTGVFQEESSL Trigger: GAGAGAGCTCTCTTCTTGAAATACGCCCGTACGCCAACGCTGGACCCGGACACGATGCACGCGCGCCTGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS CAA 72 bp | GGCGCAGGCGCGCGTGCATCGTGTCCGGGTCCAGCGTaGGCGTACGGGCGTATTTCAAGAAGAGAGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GAGARASCPGPA*AYGRISRRELS Trigger: AGAGAGCTCTCTTCTTGAAATACGCCCGTACGCCAACGCTGGACCCGGACACGATGCACGCGCGCCTGCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS GCA 72 bp | AGGGGCACAGGGTGGCTCAGCTCCGAGGGGCTCATCTaGTGTCCCATCTCTGTCTTGGTGGCTATATATGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGTGWLSSEGLI*CPISVLVAIYA Trigger: GGCATATATAGCCACCAAGACAGAGATGGGACAGCAGATGAGCCCCTCGGAGCTGAGCCACCCTGTGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS GCA 72 bp | GTTGCCAAACACTCTAAACAGTCCTGGATTAGCTTCTaGACACGCACAGCCTCCTCCTCGGCCAGGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VAKHSKQSWISF*TRTASSSARPT Trigger: GGTGGGCCTGGCCGAGGAGGAGGCTGTGCGTGTGCAGAAGCTAATCCAGGACTGTTTAGAGTGTTTGGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS GCA 72 bp | TCCATGACCTCAATCTGCTTCCCACAAGTCTCGGCTTaGTCCCGGTACACCTGGAGGGTGAGCTGTGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SMTSICFPQVSA*SRYTWRVSCVL Trigger: AAGCACACAGCTCACCCTCCAGGTGTACCGGGAGCAAGCCGAGACTTGTGGGAAGCAGATTGAGGTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS GCA 72 bp | CATCTGCTGTCCCATCTCTGTCTTGGTGGCTATATATaGCTGCAGCAGCTGAACAGGGTTGGGCTCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLLSHLCLGGYI*LQQLNRVGLLA Trigger: GGCCAGGAGCCCAACCCTGTTCAGCTGCTGCAGGCATATATAGCCACCAAGACAGAGATGGGACAGCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CCA 72 bp | CCGAGGGGCTCATCTGCTGTCCCATCTCTGTCTTGGTaGCTATATATGCCTGCAGCAGCTGAACAGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRGSSAVPSLSW*LYMPAAAEQGW Trigger: CCAACCCTGTTCAGCTGCTGCAGGCATATATAGCCACCAAGACAGAGATGGGACAGCAGATGAGCCCCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
||
| CDS CCA 72 bp | CGTATTTCAAGAAGAGAGCTCTCTCTGGCGAGGGGCTaGTTTTCAACAAGGCGCCTGGCTTGGTGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RISRRELSLARG*FSTRRLAWCWR Trigger: CCTCCAGCACCAAGCCAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTCTTGAAATACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046897.13 |
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| CDS CCA 72 bp | CACATTTCAAGAAGAGAGCTCTCTCTGGCGAGGGGCTaGTTTTCAACAAGGCGCCTGGCTTGGTGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HISRRELSLARG*FSTRRLAWCWR Trigger: CCTCCAGCACCAAGCCAGGCGCCTTGTTGAAAACCAGCCCCTCGCCAGAGAGAGCTCTCTTCTTGAAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102924.3 |
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| CDS CAA 72 bp | ATCCATGACCTCAATCTGCTTCCCACAAGTCTCGGCTaGCTCCCGGTACACCTGGAGGGTGAGCTGTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IHDLNLLPTSLG*LPVHLEGELCA Trigger: AGCACACAGCTCACCCTCCAGGTGTACCGGGAGCAAGCCGAGACTTGTGGGAAGCAGATTGAGGTCATGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
||
| CDS CAA 72 bp | TTCCCGATGGCTTCCACAAACTCCTTAAAGAAGTTCTaGACAGGCTCGAAGGACAGGGGCACAGGGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FPMASTNSLKKF*TGSKDRGTGWL Trigger: GAGCCACCCTGTGCCCCTGTCCTTCGAGCCTGTCAAGAACTTCTTTAAGGAGTTTGTGGAAGCCATCGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CAA 90 bp | AGAGAAGTCATCCATGACCTCAATCTGCTTCCCACAAGTCTCGGCTaGCTCCCGGTACACCTGGAGGGTGAGCTGTGTGCTTTTGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: REVIHDLNLLPTSLG*LPVHLEGELCAFVN Trigger: ATTGACAAAAGCACACAGCTCACCCTCCAGGTGTACCGGGAGCAAGCCGAGACTTGTGGGAAGCAGATTGAGGTCATGGATGACTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
||
| CDS TCA 72 bp | GAGTTCTGTGAATTTCTGTGTCAGCCAGGCTTTACTTaGGTCTGCGTAAACCTTGAGCCTTTCCCCGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: EFCEFLCQPGFT*VCVNLEPFPGV Trigger: GACGCCGGGGAAAGGCTCAAGGTTTACGCAGACTCAAGTAAAGCCTGGCTGACACAGAAATTCACAGAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
||
| CDS CCA 72 bp | TGCTTCCCACAAGTCTCGGCTTGCTCCCGGTACACCTaGAGGGTGAGCTGTGTGCTTTTGTCAATGAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: CFPQVSACSRYT*RVSCVLLSMNF Trigger: AAAATTCATTGACAAAAGCACACAGCTCACCCTCCAGGTGTACCGGGAGCAAGCCGAGACTTGTGGGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS CAA 72 bp | GCTGGCAGTTTATGTTTTCCTTCAGGCGAGTGTCCATaGGTGTCTGCAACGTGTTCCCGATGGCTTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: AGSLCFPSGECP*VSATCSRWLPQ Trigger: TTGTGGAAGCCATCGGGAACACGTTGCAGACACCAATGGACACTCGCCTGAAGGAAAACATAAACTGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS TCA 72 bp | TTTCAACAAGGCGCCTGGCTTGGTGCTGGAGGAGTTTaGAAGCTGGCAGTTTATGTTTTCCTTCAGGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: FQQGAWLGAGGV*KLAVYVFLQAS Trigger: ACTCGCCTGAAGGAAAACATAAACTGCCAGCTTTCAAACTCCTCCAGCACCAAGCCAGGCGCCTTGTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CCA 72 bp | CTGGCAGTTTATGTTTTCCTTCAGGCGAGTGTCCATTaGTGTCTGCAACGTGTTCCCGATGGCTTCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LAVYVFLQASVH*CLQRVPDGFHK Trigger: TTTGTGGAAGCCATCGGGAACACGTTGCAGACACCAATGGACACTCGCCTGAAGGAAAACATAAACTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CAA 72 bp | TTTTCAACAAGGCGCCTGGCTTGGTGCTGGAGGAGTTaGAAAGCTGGCAGTTTATGTTTTCCTTCAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: FSTRRLAWCWRS*KAGSLCFPSGE Trigger: CTCGCCTGAAGGAAAACATAAACTGCCAGCTTTCAAACTCCTCCAGCACCAAGCCAGGCGCCTTGTTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CAA 90 bp | CGGTACACCTGGAGGGTGAGCTGTGTGCTTTTGTCAATGAATTTTTaGGCCAGTACTTCCTCTTCATCCAGGAGTAATCTGAGTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RYTWRVSCVLLSMNF*ASTSSSSRSNLSSV Trigger: CACAGAACTCAGATTACTCCTGGATGAAGAGGAAGTACTGGCCAAAAAATTCATTGACAAAAGCACACAGCTCACCCTCCAGGTGTACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS GCA 72 bp | TTTATGTTTTCCTTCAGGCGAGTGTCCATTGGTGTCTaGAACGTGTTCCCGATGGCTTCCACAAACTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: FMFSFRRVSIGV*NVFPMASTNSL Trigger: TAAGGAGTTTGTGGAAGCCATCGGGAACACGTTGCAGACACCAATGGACACTCGCCTGAAGGAAAACATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 |
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| CDS CAA 72 bp | TCCAAATGGGCTATGTTGTCCGCATGTTGCCTCTTCTaGGTTGCCAAACACTCTAAACAGTCCTGGATTAGC | + |
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Preference number: 6 (lower is better) Translates to: SKWAMLSACCLF*VAKHSKQSWIS Trigger: GCTAATCCAGGACTGTTTAGAGTGTTTGGCAACCAAGAAGAGGCAACATGCGGACAACATAGCCCATTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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| CDS CAA 72 bp | TGGAGGGTGAGCTGTGTGCTTTTGTCAATGAATTTTTaGGCCAGTACTTCCTCTTCATCCAGGAGTAATCTG | + |
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Preference number: 6 (lower is better) Translates to: WRVSCVLLSMNF*ASTSSSSRSNL Trigger: CAGATTACTCCTGGATGAAGAGGAAGTACTGGCCAAAAAATTCATTGACAAAAGCACACAGCTCACCCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046897.13 ENSMUST00000102924.3 ENSMUST00000184112.8 |
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