Pregenerated sensors for TRIM12C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057143Ensembl transcript IDs: ENSMUST00000059037.15, ENSMUST00000130139.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCACCTCCTCACCATGCACAAGGCCTTGGCTTCCACCTCTGGCATaGAGAATAAGAGAACTTTGCAGCAGTGTTATCTTACACAATGAG | + |
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Preference number: 1 (lower is better) Translates to: STSSPCTRPWLPPLA*RIRELCSSVILHNE Trigger: CTCATTGTGTAAGATAACACTGCTGCAAAGTTCTCTTATTCTTCATGCCAGAGGTGGAAGCCAAGGCCTTGTGCATGGTGAGGAGGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR GCA 90 bp | CTACAACATATGTGTGGAAGTCAGGTGCAGGGAATTGAACTCAAGTaGTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCT | + |
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Preference number: 1 (lower is better) Translates to: LQHMCGSQVQGIELK*SGLLTRTISHWPIS Trigger: AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTCAATTCCCTGCACCTGACTTCCACACATATGTTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR CCA 90 bp | AGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCATACTaGCTTGAGGCAGAGTACGAAAATAAGCATAGTCACACTGCCACT | + |
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Preference number: 1 (lower is better) Translates to: RLVDKDYFPLAHFSY*LEAEYENKHSHTAT Trigger: AGTGGCAGTGTGACTATGCTTATTTTCGTACTCTGCCTCAAGCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR TCA 90 bp | CCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTCCTCTCTAACATaGTTTAGACTATCAATGCTCTTCAAAAATATGGAATGCTTCATA | + |
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Preference number: 1 (lower is better) Translates to: PFPSLPFPSLPSSLT*FRLSMLFKNMECFI Trigger: TATGAAGCATTCCATATTTTTGAAGAGCATTGATAGTCTAAATCATGTTAGAGAGGAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR TCA 90 bp | GCTCTTCAAAAATATGGAATGCTTCATAAACTCGCATGTCATCTATaGGCAGGGGCCATATTAACATTCCCTGATCATTCTACTTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: ALQKYGMLHKLACHL*AGAILTFPDHSTLG Trigger: TCCCAAAGTAGAATGATCAGGGAATGTTAATATGGCCCCTGCTCATAGATGACATGCGAGTTTATGAAGCATTCCATATTTTTGAAGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR CCA 90 bp | ATATTCTTTATTATGTTAAACAGGGTCTTACTCTGTATACAAGGTTaGCTTCAAATACAGAGCAATCTTCCTGCCACAACTTCCCAGATG | + |
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Preference number: 1 (lower is better) Translates to: IFFIMLNRVLLCIQG*LQIQSNLPATTSQM Trigger: CATCTGGGAAGTTGTGGCAGGAAGATTGCTCTGTATTTGAAGCCAACCTTGTATACAGAGTAAGACCCTGTTTAACATAATAAAGAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR TCA 90 bp | ATATATATACACACATGGTACCTTATTCATTTGGGGTCTTTATTGTaGCTAAAGAAAGTGATCACTAAGAATACACACACACCCCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: IYIHTWYLIHLGSLL*LKKVITKNTHTPLH Trigger: ATGGAGGGGTGTGTGTGTATTCTTAGTGATCACTTTCTTTAGTCACAATAAAGACCCCAAATGAATAAGGTACCATGTGTGTATATATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCTTGGCATGAGCTCAGGCAAATaGACATACATATCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VEHLLRGGAPPHHAQGLGMSSGK*TYISEP Trigger: TGGCTCTGATATGTATGTCCATTTGCCTGAGCTCAT...GCCAAGGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR-3UTR TCA 90 bp | GAACTCAAGTGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTGGAACACATGACGCCTaGGCAAGAACACAGTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: ELKCSGLLTRTISHWPISGTHDA*ARTQCA Trigger: GGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCC...AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR TCA 90 bp | GCTTCAAATACAGAGCAATCTTCCTGCCACAACTTCCCAGATGCAGCACGGCAGTCAGGTGCAGGGAATTaGACTCAAGTGCTCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ASNTEQSSCHNFPDAARQSGAGN*TQVLRL Trigger: AAGCCTGAGCACTTGAGTTCAATTCCCTGCACCTGA...CTGCCGTGCTGCATCTGGGAAGTTGTGGCAGGAAGATTGCTCTGTATTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR CAA 90 bp | TGTGGAAGTCAGGTGCAGGGAATTGAACTCAAGTGCTCAGGCTTGTaGACAAGGACTATTTCCCACTGGCCCATTTCTCATACTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: CGSQVQGIELKCSGL*TRTISHWPISHTGL Trigger: CAAGCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTCAATTCCCTGCACCTGACTTCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR CAA 90 bp | ATGTGTGGAAGTCAGGTGCAGGGAATTGAACTCAAGTGCTCAGGCTaGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCATACTGGC | + |
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Preference number: 2 (lower is better) Translates to: MCGSQVQGIELKCSG*LTRTISHWPISHTG Trigger: GCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTCAATTCCCTGCACCTGACTTCCACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGAGGCAGAGTACGAAAATAAGCATAGTCACACTGCCACTGCTGACACGTGAGAAAATGGTACGATaGGCTCAGGCAAATGGACAT | + |
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Preference number: 2 (lower is better) Translates to: GLRQSTKISIVTLPLLTREKMVR*AQANGH Trigger: ATGTCCATTTGCCTGAGCTCATCGTACCATTTTCTC...ACGTGTCAGCAGTGGCAGTGTGACTATGCTTATTTTCGTACTCTGCCTCAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR CAA 90 bp | TTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCATACTGGCTaGAGGCAGAGTACGAAAATAAGCATAGTCACACTGCCACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLTRTISHWPISHTG*RQSTKISIVTLPLL Trigger: CAGCAGTGGCAGTGTGACTATGCTTATTTTCGTACTCTGCCTCAAGCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR CCA 90 bp | GAACTCAAGTGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCTGATCATTCTACTTTaGGAACACATGACGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ELKCSGLLTRTISHWPISLIILL*EHMTPE Trigger: CTCAGGCGTCATGTGTTCCCAAAGTAGAATGATCAG...AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTAAAACTGGCCTACAGCTAAGGGTGCATTTCTTAACCACAGATTCCTACCTTCCACCTCTGGCATaGAGAATAAGAGAACTTTGC | + |
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Preference number: 2 (lower is better) Translates to: PGKTGLQLRVHFLTTDSYLPPLA*RIRELC Trigger: GCAAAGTTCTCTTATTCTTCATGCCAGAGGTGGAAG...GTAGGAATCTGTGGTTAAGAAATGCACCCTTAGCTGTAGGCCAGTTTTACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR-3UTR TCA 90 bp | ATACAAGGTTGGCTTCAAATACAGAGCAATCTTCCTGCCACAACTTCCCAGATGCTTCCACCTCTGGCATaGAGAATAAGAGAACTTTGC | + |
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Preference number: 2 (lower is better) Translates to: IQGWLQIQSNLPATTSQMLPPLA*RIRELC Trigger: GCAAAGTTCTCTTATTCTTCATGCCAGAGGTGGAAG...CATCTGGGAAGTTGTGGCAGGAAGATTGCTCTGTATTTGAAGCCAACCTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTAAAACTGGCCTACAGCTAAGGGTGCATTTCTTAACCACAGATTCCTACATGAGCTCAGGCAAATaGACATACATATCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PGKTGLQLRVHFLTTDSYMSSGK*TYISEP Trigger: TGGCTCTGATATGTATGTCCATTTGCCTGAGCTCAT...GTAGGAATCTGTGGTTAAGAAATGCACCCTTAGCTGTAGGCCAGTTTTACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCTCTACATGCTACAACATATGTGTGGAAGTCAGGTGCAGGGAATTGAACCATATTAACATTCCCTaGTCATTCTACTTTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: WASTCYNICVEVRCRELNHINIP*SFYFGN Trigger: GTTCCCAAAGTAGAATGATCAGGGAATGTTAATATG...GTTCAATTCCCTGCACCTGACTTCCACACATATGTTGTAGCATGTAGAGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR TCA 90 bp | ATACAAGGTTGGCTTCAAATACAGAGCAATCTTCCTGCCACAACTTCCCAGATGTGCCAGTCACATGCCTaGAACAATGTAAATCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: IQGWLQIQSNLPATTSQMCQSHA*NNVNLS Trigger: ACTAAGATTTACATTGTTTCAGGCATGTGACTGGCA...CATCTGGGAAGTTGTGGCAGGAAGATTGCTCTGTATTTGAAGCCAACCTTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR GCA 90 bp | TCAGGAAAGCTAACCCTTGTTTATTTTCCCATGGTTTCATGGGACACTATAACAAGCAAGAACACAGTGTaGCTCATTGTGATGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SGKLTLVYFPMVSWDTITSKNTV*LIVMLL Trigger: GAGAAGCATCACAATGAGGCACACTGTGTTCTTGCT...TGTTATAGTGTCCCATGAAACCATGGGAAAATAAACAAGGGTTAGCTTTCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGGGTGCATTTCTTAACCACAGATTCCTACCTATAATTTTCAGAATGAATGAGAAAATGGTACGATaGGCTCAGGCAAATGGACAT | + |
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Preference number: 2 (lower is better) Translates to: AKGAFLNHRFLPIIFRMNEKMVR*AQANGH Trigger: ATGTCCATTTGCCTGAGCTCATCGTACCATTTTCTC...ATTCATTCTGAAAATTATAGGTAGGAATCTGTGGTTAAGAAATGCACCCTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR-3UTR GCA 90 bp | AACTGGCCTACAGCTAAGGGTGCATTTCTTAACCACAGATTCCTACCTATAATTAGAATAAGAGAACTTTaGAGCAGTGTTATCTTACAC | + |
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Preference number: 2 (lower is better) Translates to: NWPTAKGAFLNHRFLPIIRIREL*SSVILH Trigger: GTGTAAGATAACACTGCTGCAAAGTTCTCTTATTCT...AATTATAGGTAGGAATCTGTGGTTAAGAAATGCACCCTTAGCTGTAGGCCAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR CAA 90 bp | TATATTCTTTATTATGTTAAACAGGGTCTTACTCTGTATACAAGGTaGGCTTCAAATACAGAGCAATCTTCCTGCCACAACTTCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: YILYYVKQGLTLYTR*ASNTEQSSCHNFPD Trigger: ATCTGGGAAGTTGTGGCAGGAAGATTGCTCTGTATTTGAAGCCAACCTTGTATACAGAGTAAGACCCTGTTTAACATAATAAAGAATATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR GCA 90 bp | GCTAAGGGTGCATTTCTTAACCACAGATTCCTACCTATAATTTTCAGAATGAATAGAATAAGAGAACTTTaGAGCAGTGTTATCTTACAC | + |
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Preference number: 2 (lower is better) Translates to: AKGAFLNHRFLPIIFRMNRIREL*SSVILH Trigger: GTGTAAGATAACACTGCTGCAAAGTTCTCTTATTCT...ATTCATTCTGAAAATTATAGGTAGGAATCTGTGGTTAAGAAATGCACCCTTAGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR-3UTR CAA 90 bp | ATCATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATACCATGCACAAGGCCTaGGCTTCCACCTCTGGCATG | + |
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Preference number: 3 (lower is better) Translates to: IILLWEHMTPEQEHSVPHTMHKA*ASTSGM Trigger: CATGCCAGAGGTGGAAGCCAAGGCCTTGTGCATGGT...ATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR CCA 72 bp | AAGTGCTCAGGCTTGTTGACAAGGACTATTTCCCACTaGCCCATTTCTCATACTGGCTTGAGGCAGAGTACG | + |
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Preference number: 3 (lower is better) Translates to: KCSGLLTRTISH*PISHTGLRQST Trigger: CGTACTCTGCCTCAAGCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR GCA 72 bp | ATGTGTGGAAGTCAGGTGCAGGGAATTGAACTCAAGTaGTCAGGCTTGTTGACAAGGACTATTTCCCACTGG | + |
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Preference number: 3 (lower is better) Translates to: MCGSQVQGIELK*SGLLTRTISHW Trigger: CCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTCAATTCCCTGCACCTGACTTCCACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR CAA 90 bp | GAACTCAAGTGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCTCAGGCACTTTTCCTaGACCAAATGGGAAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: ELKCSGLLTRTISHWPISLRHFS*TKWEVI Trigger: AATCACTTCCCATTTGGTCAAGGAAAAGTGCCTGAG...AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR TCA 72 bp | AGGTGCAGGGAATTGAACTCAAGTGCTCAGGCTTGTTaGCAAGGACTATTTCCCACTGGCCCATTTCTCATA | + |
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Preference number: 3 (lower is better) Translates to: RCRELNSSAQAC*QGLFPTGPFLI Trigger: TATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTCAATTCCCTGCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR TCA 72 bp | TCACCATGCACAAGGCCTTGGCTTCCACCTCTGGCATaGAGAATAAGAGAACTTTGCAGCAGTGTTATCTTA | + |
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Preference number: 3 (lower is better) Translates to: SPCTRPWLPPLA*RIRELCSSVIL Trigger: TAAGATAACACTGCTGCAAAGTTCTCTTATTCTTCATGCCAGAGGTGGAAGCCAAGGCCTTGTGCATGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR CCA 72 bp | GACAAGGACTATTTCCCACTGGCCCATTTCTCATACTaGCTTGAGGCAGAGTACGAAAATAAGCATAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: DKDYFPLAHFSY*LEAEYENKHSH Trigger: GTGACTATGCTTATTTTCGTACTCTGCCTCAAGCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR-3UTR CAA 90 bp | GCTAAGGGTGCATTTCTTAACCACAGATTCCTACCTATAATTTTCAGAATGAATACCATGCACAAGGCCTaGGCTTCCACCTCTGGCATG | + |
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Preference number: 3 (lower is better) Translates to: AKGAFLNHRFLPIIFRMNTMHKA*ASTSGM Trigger: CATGCCAGAGGTGGAAGCCAAGGCCTTGTGCATGGT...ATTCATTCTGAAAATTATAGGTAGGAATCTGTGGTTAAGAAATGCACCCTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR-3UTR CAA 90 bp | AACTGGCCTACAGCTAAGGGTGCATTTCTTAACCACAGATTCCTACCTATAATTCTCAGGCACTTTTCCTaGACCAAATGGGAAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: NWPTAKGAFLNHRFLPIILRHFS*TKWEVI Trigger: AATCACTTCCCATTTGGTCAAGGAAAAGTGCCTGAG...AATTATAGGTAGGAATCTGTGGTTAAGAAATGCACCCTTAGCTGTAGGCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR TCA 72 bp | TCCCTTCCCTTCCCTTCCCTTCCCTCCTCTCTAACATaGTTTAGACTATCAATGCTCTTCAAAAATATGGAA | + |
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Preference number: 3 (lower is better) Translates to: SLPFPSLPSSLT*FRLSMLFKNME Trigger: TTCCATATTTTTGAAGAGCATTGATAGTCTAAATCATGTTAGAGAGGAGGGAAGGGAAGGGAAGGGAAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGGAAAGCTAACCCTTGTTTATTTTCCCATGGTTTCATGGGACACTATAACACTTCTCCTTCATTCTTaGATGAAGATGCATCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SGKLTLVYFPMVSWDTITLLLHS*MKMHPG Trigger: ACCAGGATGCATCTTCATCAAAGAATGAAGGAGAAG...TGTTATAGTGTCCCATGAAACCATGGGAAAATAAACAAGGGTTAGCTTTCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR TCA 72 bp | AAATATGGAATGCTTCATAAACTCGCATGTCATCTATaGGCAGGGGCCATATTAACATTCCCTGATCATTCT | + |
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Preference number: 3 (lower is better) Translates to: KYGMLHKLACHL*AGAILTFPDHS Trigger: AGAATGATCAGGGAATGTTAATATGGCCCCTGCTCATAGATGACATGCGAGTTTATGAAGCATTCCATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| 3UTR CCA 72 bp | ATTATGTTAAACAGGGTCTTACTCTGTATACAAGGTTaGCTTCAAATACAGAGCAATCTTCCTGCCACAACT | + |
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Preference number: 3 (lower is better) Translates to: IMLNRVLLCIQG*LQIQSNLPATT Trigger: AGTTGTGGCAGGAAGATTGCTCTGTATTTGAAGCCAACCTTGTATACAGAGTAAGACCCTGTTTAACATAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| 3UTR TCA 72 bp | CACACATGGTACCTTATTCATTTGGGGTCTTTATTGTaGCTAAAGAAAGTGATCACTAAGAATACACACACA | + |
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Preference number: 3 (lower is better) Translates to: HTWYLIHLGSLL*LKKVITKNTHT Trigger: TGTGTGTGTATTCTTAGTGATCACTTTCTTTAGTCACAATAAAGACCCCAAATGAATAAGGTACCATGTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
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| CDS-3UTR TCA 90 bp | GTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCTTGGCCCTTGGCAGAAGCTGTaGCCACAATCTGCACTCACA | + |
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Preference number: 4 (lower is better) Translates to: VEHLLRGGAPPHHAQGLGPWQKL*PQSALT Trigger: TGTGAGTGCAGATTGTGGTCACAGCTTCTGCCAAGG...GCCAAGGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR TCA 90 bp | GTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCTTGGCCCCAGGACACCTTCATaGGAGTTTTCACAGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: VEHLLRGGAPPHHAQGLGPRTPS*EFSQPC Trigger: ACATGGCTGTGAAAACTCTCATGAAGGTGTCCTGGG...GCCAAGGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR TCA 90 bp | CTCAGTGGTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCACTGGGCTTGCCTGTaGAAGGACACTCCTCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSGGAPPQGWSTSSPCTRHWACL*KDTPQK Trigger: CTTTTGAGGAGTGTCCTTTCACAGGCAAGCCCAGTG...CCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCACCACTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR CCA 90 bp | CAGTGGTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCGCCAGCAAATTGTCATaGGCTCTGAACTTCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: QWWSTSSGVEHLLTMHKAASKLS*ALNFPW Trigger: CCATGGGAAGTTCAGAGCCCATGACAATTTGCTGGC...GGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCACCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR GCA 90 bp | CAGTGGTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCGCTGTGACCACAATCTaGACTCACAGGTTTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: QWWSTSSGVEHLLTMHKAAVTTI*THRFHH Trigger: ATGGTGAAACCTGTGAGTGCAGATTGTGGTCACAGC...GGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCACCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR GCA 90 bp | GTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCTTGGCGCTGTGACCACAATCTaGACTCACAGGTTTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: VEHLLRGGAPPHHAQGLGAVTTI*THRFHH Trigger: ATGGTGAAACCTGTGAGTGCAGATTGTGGTCACAGC...GCCAAGGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR GCA 90 bp | CTCAGTGGTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCAGTTAAACACTTTCTaGTCCTCTTCTGGGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGGAPPQGWSTSSPCTRQLNTF*SSSGLG Trigger: GCCTAGCCCAGAAGAGGAGCAGAAAGTGTTTAACTG...CCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCACCACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGGTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGTTTCTGCTCCTCTTCTaGGCTAGGCTTGAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSGGAPPQGWSTSSPCTRFLLLF*ARLELF Trigger: AAAGAGTTCAAGCCTAGCCCAGAAGAGGAGCAGAAA...CCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCACCACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR TCA 90 bp | GTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCTTGGCCGTTTAAACTCTGACTaGACATTCTCCACATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VEHLLRGGAPPHHAQGLGRLNSD*TFSTSF Trigger: GAAAGATGTGGAGAATGTTCAGTCAGAGTTTAAACG...GCCAAGGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| 3UTR CAA 72 bp | TCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCTaGGCTTCCACCTCTGGCATGAAGAATAAGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SGVEHLLTMHKA*ASTSGMKNKRT Trigger: AGTTCTCTTATTCTTCATGCCAGAGGTGGAAGCCAAGGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCTTGGCAGTAATGGCAATGTTTaGATTGTTGTTTTGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEHLLRGGAPPHHAQGLGSNGNV*IVVLNQ Trigger: CTGGTTCAAAACAACAATCCAAACATTGCCATTACT...GCCAAGGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCATACTGGCCACTGGGCTTGCCTGTaGAAGGACACTCCTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSGLLTRTISHWPISHTGHWACL*KDTPQK Trigger: CTTTTGAGGAGTGTCCTTTCACAGGCAAGCCCAGTG...GCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR TCA 90 bp | CCTGGTAAAACTGGCCTACAGCTAAGGGTGCATTTCTTAACCACAGATTCCTACCCTTGGCAGAAGCTGTaGCCACAATCTGCACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGKTGLQLRVHFLTTDSYPWQKL*PQSALT Trigger: TGTGAGTGCAGATTGTGGTCACAGCTTCTGCCAAGG...GTAGGAATCTGTGGTTAAGAAATGCACCCTTAGCTGTAGGCCAGTTTTACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCATACTGGCAGCAACTTGCTCTGCTaGGCATGCTCATTTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSGLLTRTISHWPISHTGSNLLC*ACSFSD Trigger: GTCTGAAAATGAGCATGCTCAGCAGAGCAAGTTGCT...GCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR TCA 90 bp | GAACTCAAGTGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCCCAGGACACCTTCATaGGAGTTTTCACAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ELKCSGLLTRTISHWPISPRTPS*EFSQPC Trigger: ACATGGCTGTGAAAACTCTCATGAAGGTGTCCTGGG...AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAATACAGAGCAATCTTCCTGCCACAACTTCCCAGATGCAGCACGGCAGCCAGTAATGTTTTCCTaGTTGGATAACTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASNTEQSSCHNFPDAARQPVMFS*LDNWVS Trigger: GGACACCCAGTTATCCAATCAGGAAAACATTACTGG...CTGCCGTGCTGCATCTGGGAAGTTGTGGCAGGAAGATTGCTCTGTATTTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| 3UTR CAA 72 bp | CAGGTGCAGGGAATTGAACTCAAGTGCTCAGGCTTGTaGACAAGGACTATTTCCCACTGGCCCATTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVQGIELKCSGL*TRTISHWPISH Trigger: ATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTCAATTCCCTGCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| 3UTR CAA 72 bp | AGTCAGGTGCAGGGAATTGAACTCAAGTGCTCAGGCTaGTTGACAAGGACTATTTCCCACTGGCCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQVQGIELKCSG*LTRTISHWPIS Trigger: AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTCAATTCCCTGCACCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAATACAGAGCAATCTTCCTGCCACAACTTCCCAGATGCAGCACGGCAGAATTGTCATGGGCTCTaGACTTCCCATGGGATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASNTEQSSCHNFPDAARQNCHGL*TSHGIK Trigger: TTTAATCCCATGGGAAGTTCAGAGCCCATGACAATT...CTGCCGTGCTGCATCTGGGAAGTTGTGGCAGGAAGATTGCTCTGTATTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR TCA 90 bp | ATCATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATAGCAACTTGCTCTGCTaGGCATGCTCATTTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IILLWEHMTPEQEHSVPHSNLLC*ACSFSD Trigger: GTCTGAAAATGAGCATGCTCAGCAGAGCAAGTTGCT...ATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR GCA 90 bp | ATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATTGTCAGTTAAACACTTTCTaGTCCTCTTCTGGGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLWEHMTPEQEHSVPHCQLNTF*SSSGLG Trigger: GCCTAGCCCAGAAGAGGAGCAGAAAGTGTTTAACTG...ACAATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR TCA 90 bp | GAACTCAAGTGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTTCTGAGCACTGTAACTaGTGTTCCACATCTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ELKCSGLLTRTISHWPISSEHCN*CSTSEM Trigger: CATTTCAGATGTGGAACATCAGTTACAGTGCTCAGA...AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR CCA 90 bp | ATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATTGTTTTCTGCTCCTCTTCTaGGCTAGGCTTGAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILLWEHMTPEQEHSVPHCFLLLF*ARLELF Trigger: AAAGAGTTCAAGCCTAGCCCAGAAGAGGAGCAGAAA...ACAATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| 3UTR CAA 72 bp | AGGACTATTTCCCACTGGCCCATTTCTCATACTGGCTaGAGGCAGAGTACGAAAATAAGCATAGTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RTISHWPISHTG*RQSTKISIVTL Trigger: CAGTGTGACTATGCTTATTTTCGTACTCTGCCTCAAGCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR TCA 90 bp | ATCATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATAATTGTCATGGGCTCTaGACTTCCCATGGGATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: IILLWEHMTPEQEHSVPHNCHGL*TSHGIK Trigger: TTTAATCCCATGGGAAGTTCAGAGCCCATGACAATT...ATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR GCA 90 bp | TGGGCCTCTACATGCTACAACATATGTGTGGAAGTCAGGTGCAGGGAATTGAACATGTTCAAGATTCCTTaGTTGGAGGTCTTCATATCG | + |
|
Preference number: 4 (lower is better) Translates to: WASTCYNICVEVRCRELNMFKIP*LEVFIS Trigger: CGATATGAAGACCTCCAAGCAAGGAATCTTGAACAT...GTTCAATTCCCTGCACCTGACTTCCACACATATGTTGTAGCATGTAGAGGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| 3UTR CAA 72 bp | ACAGTGTGCCTCATTGTGATGCTTCTCCTTCATTCTTaGATGAAGATGCATCCTGGTAAAACTGGCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TVCLIVMLLLHS*MKMHPGKTGLQ Trigger: CTGTAGGCCAGTTTTACCAGGATGCATCTTCATCAAAGAATGAAGGAGAAGCATCACAATGAGGCACACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR TCA 90 bp | ATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATTGTGGAAATATTGTAAAATaGGAGAGTCCCAGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: ILLWEHMTPEQEHSVPHCGNIVK*ESPSCI Trigger: TATGCAGCTGGGACTCTCTCATTTTACAATATTTCC...ACAATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR GCA 90 bp | GAACTCAAGTGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTTTTCTCTCCATGTCTTaGACAGTTAAACACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELKCSGLLTRTISHWPISFLSMS*TVKHFL Trigger: CAGAAAGTGTTTAACTGTGCAAGACATGGAGAGAAA...AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR GCA 90 bp | CCTGGTAAAACTGGCCTACAGCTAAGGGTGCATTTCTTAACCACAGATTCCTACATGTTCAAGATTCCTTaGTTGGAGGTCTTCATATCG | + |
|
Preference number: 4 (lower is better) Translates to: PGKTGLQLRVHFLTTDSYMFKIP*LEVFIS Trigger: CGATATGAAGACCTCCAAGCAAGGAATCTTGAACAT...GTAGGAATCTGTGGTTAAGAAATGCACCCTTAGCTGTAGGCCAGTTTTACCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR CCA 90 bp | GAACTCAAGTGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTAGTAATGGCAATGTTTaGATTGTTGTTTTGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELKCSGLLTRTISHWPISSNGNV*IVVLNQ Trigger: CTGGTTCAAAACAACAATCCAAACATTGCCATTACT...AGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCACTTGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR TCA 90 bp | CAGGCACTTTTCCTTGACCAAATGGGAAGTGATTTACTATTCTCATCTAAAACACCAGTAATGTTTTCCTaGTTGGATAACTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QALFLDQMGSDLLFSSKTPVMFS*LDNWVS Trigger: GGACACCCAGTTATCCAATCAGGAAAACATTACTGG...TGTTTTAGATGAGAATAGTAAATCACTTCCCATTTGGTCAAGGAAAAGTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR TCA 90 bp | CAGGCACTTTTCCTTGACCAAATGGGAAGTGATTTACTATTCTCATCTAAAACATCTGAGCACTGTAACTaGTGTTCCACATCTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QALFLDQMGSDLLFSSKTSEHCN*CSTSEM Trigger: CATTTCAGATGTGGAACATCAGTTACAGTGCTCAGA...TGTTTTAGATGAGAATAGTAAATCACTTCCCATTTGGTCAAGGAAAAGTGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| 3UTR CAA 72 bp | TATTATGTTAAACAGGGTCTTACTCTGTATACAAGGTaGGCTTCAAATACAGAGCAATCTTCCTGCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: YYVKQGLTLYTR*ASNTEQSSCHN Trigger: GTTGTGGCAGGAAGATTGCTCTGTATTTGAAGCCAACCTTGTATACAGAGTAAGACCCTGTTTAACATAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR TCA 90 bp | CAGGCACTTTTCCTTGACCAAATGGGAAGTGATTTACTATTCTCATCTAAAACAGGAAATATTGTAAAATaGGAGAGTCCCAGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QALFLDQMGSDLLFSSKTGNIVK*ESPSCI Trigger: TATGCAGCTGGGACTCTCTCATTTTACAATATTTCC...TGTTTTAGATGAGAATAGTAAATCACTTCCCATTTGGTCAAGGAAAAGTGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CCA 90 bp | GCCATCAGCCTTTGCAGAACTACCTGCAGCTGCTCCTTGTACTCCTaGGCCACCTCTTCAATGAGAGCTGTTTTGTGGCCCCGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AISLCRTTCSCSLYS*ATSSMRAVLWPRCS Trigger: GGAGCACCGGGGCCACAAAACAGCTCTCATTGAAGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR CAA 90 bp | GTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGCCTTGGCGACTCTGCCAGTTTGTaGATAATGTTTTCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VEHLLRGGAPPHHAQGLGDSASL*IMFSFS Trigger: AGAGAAGGAAAACATTATCAACAAACTGGCAGAGTC...GCCAAGGCCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CAA 90 bp | CTCAGTGGTGGAGCACCTCCTCAGGGGTGGAGCACCTCCTCACCATGCACAAGGATTTCCTTATCGCATTaGGTGGATTCAAAGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: LSGGAPPQGWSTSSPCTRISLSH*VDSKYT Trigger: GGTGTACTTTGAATCCACCAAATGCGATAAGGAAAT...CCTTGTGCATGGTGAGGAGGTGCTCCACCCCTGAGGAGGTGCTCCACCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS GCA 90 bp | AATTCTTTCTTGTCTGCCATCAGCCTTTGCAGAACTACCTGCAGCTaGTCCTTGTACTCCTGGGCCACCTCTTCAATGAGAGCTGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSFLSAISLCRTTCS*SLYSWATSSMRAVL Trigger: CAAAACAGCTCTCATTGAAGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGACAAGAAAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS GCA 90 bp | TCATCTTTCCAGTTTTCAAATTCTTTCTTGTCTGCCATCAGCCTTTaGAGAACTACCTGCAGCTGCTCCTTGTACTCCTGGGCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSFQFSNSFLSAISL*RTTCSCSLYSWATS Trigger: AGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGACAAGAAAGAATTTGAAAACTGGAAAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CAA 90 bp | ATCATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATGTTTGGATTGTTGTTTaGAACCAGCGTCACCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IILLWEHMTPEQEHSVPHVWIVV*NQRHLN Trigger: GTTCAGGTGACGCTGGTTCAAAACAACAATCCAAAC...ATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CAA 90 bp | TGCTCAGGCTTGTTGACAAGGACTATTTCCCACTGGCCCATTTCTCATACTGGCTATCGTATTTGCCTTTaGTCATCAGTAATGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: CSGLLTRTISHWPISHTGYRICL*SSVMAM Trigger: CATTGCCATTACTGATGACAAAAGGCAAATACGATA...GCCAGTATGAGAAATGGGCCAGTGGGAAATAGTCCTTGTCAACAAGCCTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR CAA 90 bp | ATCATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATCATGTTCAAGATTCCTaGCTTGGAGGTCTTCATATC | + |
|
Preference number: 5 (lower is better) Translates to: IILLWEHMTPEQEHSVPHHVQDS*LGGLHI Trigger: GATATGAAGACCTCCAAGCAAGGAATCTTGAACATG...ATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CAA 90 bp | ATTCTACTTTGGGAACACATGACGCCTGAGCAAGAACACAGTGTGCCTCATTGTCATGTTCAAGATTCCTaGCTTGGAGGTCTTCATATC | + |
|
Preference number: 5 (lower is better) Translates to: ILLWEHMTPEQEHSVPHCHVQDS*LGGLHI Trigger: GATATGAAGACCTCCAAGCAAGGAATCTTGAACATG...ACAATGAGGCACACTGTGTTCTTGCTCAGGCGTCATGTGTTCCCAAAGTAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS TCA 90 bp | CGATGGCTTTGGGCTTCTTCATCGAAAAAGTATGACTCCGTTTTATaGTGTTCTCCACACCCTGCAGTATTTCTATGTCTGAGCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RWLWASSSKKYDSVL*CSPHPAVFLCLSTV Trigger: TACAGTGCTCAGACATAGAAATACTGCAGGGTGTGGAGAACATCATAAAACGGAGTCATACTTTTTCGATGAAGAAGCCCAAAGCCATCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CAA 90 bp | CCTGGTAAAACTGGCCTACAGCTAAGGGTGCATTTCTTAACCACAGATTCCTACATTTCCTTATCGCATTaGGTGGATTCAAAGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: PGKTGLQLRVHFLTTDSYISLSH*VDSKYT Trigger: GGTGTACTTTGAATCCACCAAATGCGATAAGGAAAT...GTAGGAATCTGTGGTTAAGAAATGCACCCTTAGCTGTAGGCCAGTTTTACCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS CCA 90 bp | GTCTTCATATCGTATTTGCCTTTTGTCATCAGTAATGGCAATGTTTaGATTGTTGTTTTGAACCAGCGTCACCTGAACCCAGTAGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VFISYLPFVISNGNV*IVVLNQRHLNPVAL Trigger: CAACGCTACTGGGTTCAGGTGACGCTGGTTCAAAACAACAATCCAAACATTGCCATTACTGATGACAAAAGGCAAATACGATATGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS GCA 90 bp | CAGGACACCTTCATGAGAGTTTTCACAGCCATGTTCAAGATTCCTTaGTTGGAGGTCTTCATATCGTATTTGCCTTTTGTCATCAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QDTFMRVFTAMFKIP*LEVFISYLPFVISN Trigger: ATTACTGATGACAAAAGGCAAATACGATATGAAGACCTCCAAGCAAGGAATCTTGAACATGGCTGTGAAAACTCTCATGAAGGTGTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGAAAGCTAACCCTTGTTTATTTTCCCATGGTTTCATGGGACACTATAACAGACTCTGCCAGTTTGTaGATAATGTTTTCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGKLTLVYFPMVSWDTITDSASL*IMFSFS Trigger: AGAGAAGGAAAACATTATCAACAAACTGGCAGAGTC...TGTTATAGTGTCCCATGAAACCATGGGAAAATAAACAAGGGTTAGCTTTCCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059037.15 |
||
| CDS-3UTR CAA 90 bp | GCTAAGGGTGCATTTCTTAACCACAGATTCCTACCTATAATTTTCAGAATGAATGTTTGGATTGTTGTTTaGAACCAGCGTCACCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AKGAFLNHRFLPIIFRMNVWIVV*NQRHLN Trigger: GTTCAGGTGACGCTGGTTCAAAACAACAATCCAAAC...ATTCATTCTGAAAATTATAGGTAGGAATCTGTGGTTAAGAAATGCACCCTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
||
| CDS-3UTR CAA 90 bp | CAGGCACTTTTCCTTGACCAAATGGGAAGTGATTTACTATTCTCATCTAAAACATCAGACTCTGCCAGTTaGTTGATAATGTTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QALFLDQMGSDLLFSSKTSDSAS*LIMFSF Trigger: GAAGGAAAACATTATCAACAAACTGGCAGAGTCTGA...TGTTTTAGATGAGAATAGTAAATCACTTCCCATTTGGTCAAGGAAAAGTGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS-3UTR CAA 90 bp | CAGGCACTTTTCCTTGACCAAATGGGAAGTGATTTACTATTCTCATCTAAAACATATCGTATTTGCCTTTaGTCATCAGTAATGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: QALFLDQMGSDLLFSSKTYRICL*SSVMAM Trigger: CATTGCCATTACTGATGACAAAAGGCAAATACGATA...TGTTTTAGATGAGAATAGTAAATCACTTCCCATTTGGTCAAGGAAAAGTGCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 72 bp | CACCTGAACCCAGTAGCGTTGAGCCTCTGTGACCTCTaGCAGCACTTGCAGCATGCCTTGCAGGTCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: HLNPVALSLCDL*QHLQHALQVRG Trigger: GCCCCTGACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCTCAACGCTACTGGGTTCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 90 bp | AACCAGCGTCACCTGAACCCAGTAGCGTTGAGCCTCTGTGACCTCTaGCAGCACTTGCAGCATGCCTTGCAGGTCAGGGGCTCGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: NQRHLNPVALSLCDL*QHLQHALQVRGSEL Trigger: AAGTTCCGAGCCCCTGACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCTCAACGCTACTGGGTTCAGGTGACGCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS TCA 72 bp | CCAGCGTCACCTGAACCCAGTAGCGTTGAGCCTCTGTaGCCTCTTGCAGCACTTGCAGCATGCCTTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PASPEPSSVEPL*PLAALAACLAG Trigger: ACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCTCAACGCTACTGGGTTCAGGTGACGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 72 bp | CCAGTAGCGTTGAGCCTCTGTGACCTCTTGCAGCACTaGCAGCATGCCTTGCAGGTCAGGGGCTCGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: PVALSLCDLLQH*QHALQVRGSEL Trigger: AAGTTCCGAGCCCCTGACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCTCAACGCTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 90 bp | CACCTGAACCCAGTAGCGTTGAGCCTCTGTGACCTCTTGCAGCACTaGCAGCATGCCTTGCAGGTCAGGGGCTCGGAACTTTCTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: HLNPVALSLCDLLQH*QHALQVRGSELSLF Trigger: GAACAAAGAAAGTTCCGAGCCCCTGACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCTCAACGCTACTGGGTTCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 90 bp | TTCTTGTCTGCCATCAGCCTTTGCAGAACTACCTGCAGCTGCTCCTaGTACTCCTGGGCCACCTCTTCAATGAGAGCTGTTTTGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: FLSAISLCRTTCSCS*YSWATSSMRAVLWP Trigger: GGGCCACAAAACAGCTCTCATTGAAGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGACAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS GCA 72 bp | TCTTTCTTGTCTGCCATCAGCCTTTGCAGAACTACCTaGAGCTGCTCCTTGTACTCCTGGGCCACCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SFLSAISLCRTT*SCSLYSWATSS Trigger: TGAAGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGACAAGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 72 bp | GTTGTTTTGAACCAGCGTCACCTGAACCCAGTAGCGTaGAGCCTCTGTGACCTCTTGCAGCACTTGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: VVLNQRHLNPVA*SLCDLLQHLQH Trigger: ATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCTCAACGCTACTGGGTTCAGGTGACGCTGGTTCAAAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 90 bp | CAGCACTTGCAGCATGCCTTGCAGGTCAGGGGCTCGGAACTTTCTTaGTTCCCTGGCGATGGCTTTGGGCTTCTTCATCGAAAAAGTATG | + |
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Preference number: 6 (lower is better) Translates to: QHLQHALQVRGSELS*FPGDGFGLLHRKSM Trigger: CATACTTTTTCGATGAAGAAGCCCAAAGCCATCGCCAGGGAACAAAGAAAGTTCCGAGCCCCTGACCTGCAAGGCATGCTGCAAGTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 90 bp | GTCATCTTTCCAGTTTTCAAATTCTTTCTTGTCTGCCATCAGCCTTaGCAGAACTACCTGCAGCTGCTCCTTGTACTCCTGGGCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: VIFPVFKFFLVCHQP*QNYLQLLLVLLGHL Trigger: GAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGACAAGAAAGAATTTGAAAACTGGAAAGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 72 bp | GGGCTAGGCTTGAACTCTTTGAGCCTCTCTACTATGTaGGCCACATGTAGATTAGGCCTCAGATTGCTAGAC | + |
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Preference number: 6 (lower is better) Translates to: GLGLNSLSLSTM*ATCRLGLRLLD Trigger: GTCTAGCAATCTGAGGCCTAATCTACATGTGGCCAACATAGTAGAGAGGCTCAAAGAGTTCAAGCCTAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS TCA 72 bp | CTGGCGATGGCTTTGGGCTTCTTCATCGAAAAAGTATaGCTCCGTTTTATGATGTTCTCCACACCCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LAMALGFFIEKV*LRFMMFSTPCS Trigger: ACTGCAGGGTGTGGAGAACATCATAAAACGGAGTCATACTTTTTCGATGAAGAAGCCCAAAGCCATCGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS TCA 72 bp | CCTGATTGGATAACTGGGTGTCCCAGGACACCTTCATaGGAGTTTTCACAGCCATGTTCAAGATTCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: PDWITGCPRTPS*EFSQPCSRFLA Trigger: AGCAAGGAATCTTGAACATGGCTGTGAAAACTCTCATGAAGGTGTCCTGGGACACCCAGTTATCCAATCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 72 bp | CCAGTTTTCAAATTCTTTCTTGTCTGCCATCAGCCTTaGCAGAACTACCTGCAGCTGCTCCTTGTACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PVFKFFLVCHQP*QNYLQLLLVLL Trigger: CAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGACAAGAAAGAATTTGAAAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS GCA 72 bp | AGTTTCTCTCCATGTCTTGCACAGTTAAACACTTTCTaGTCCTCTTCTGGGCTAGGCTTGAACTCTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SFSPCLAQLNTF*SSSGLGLNSLS Trigger: GCTCAAAGAGTTCAAGCCTAGCCCAGAAGAGGAGCAGAAAGTGTTTAACTGTGCAAGACATGGAGAGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 90 bp | TATTTGCCTTTTGTCATCAGTAATGGCAATGTTTGGATTGTTGTTTaGAACCAGCGTCACCTGAACCCAGTAGCGTTGAGCCTCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: YLPFVISNGNVWIVV*NQRHLNPVALSLCD Trigger: GTCACAGAGGCTCAACGCTACTGGGTTCAGGTGACGCTGGTTCAAAACAACAATCCAAACATTGCCATTACTGATGACAAAAGGCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS TCA 72 bp | TGTCTGAGCACTGTAACTGATGTTCCACATCTGAAATaGAGTCTTCTAGCAACTTGCTCTGCTGAGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: CLSTVTDVPHLK*SLLATCSAEHA Trigger: AGCATGCTCAGCAGAGCAAGTTGCTAGAAGACTTCATTTCAGATGTGGAACATCAGTTACAGTGCTCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 72 bp | TTTGTCATCAGTAATGGCAATGTTTGGATTGTTGTTTaGAACCAGCGTCACCTGAACCCAGTAGCGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FVISNGNVWIVV*NQRHLNPVALS Trigger: GCTCAACGCTACTGGGTTCAGGTGACGCTGGTTCAAAACAACAATCCAAACATTGCCATTACTGATGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS TCA 72 bp | ACATCTGAAATGAAGTCTTCTAGCAACTTGCTCTGCTaGGCATGCTCATTTTCAGACTCTGCCAGTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: TSEMKSSSNLLC*ACSFSDSASLL Trigger: CAACAAACTGGCAGAGTCTGAAAATGAGCATGCTCAGCAGAGCAAGTTGCTAGAAGACTTCATTTCAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS TCA 72 bp | ACACCCTGCAGTATTTCTATGTCTGAGCACTGTAACTaGTGTTCCACATCTGAAATGAAGTCTTCTAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: TPCSISMSEHCN*CSTSEMKSSSN Trigger: GTTGCTAGAAGACTTCATTTCAGATGTGGAACATCAGTTACAGTGCTCAGACATAGAAATACTGCAGGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS GCA 72 bp | CAACTTGCTCTGCTGAGCATGCTCATTTTCAGACTCTaGCAGTTTGTTGATAATGTTTTCCTTCTCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QLALLSMLIFRL*QFVDNVFLLLL Trigger: AAGCAAGAGAAGGAAAACATTATCAACAAACTGGCAGAGTCTGAAAATGAGCATGCTCAGCAGAGCAAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CCA 72 bp | TCGTATTTGCCTTTTGTCATCAGTAATGGCAATGTTTaGATTGTTGTTTTGAACCAGCGTCACCTGAACCCA | + |
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Preference number: 6 (lower is better) Translates to: SYLPFVISNGNV*IVVLNQRHLNP Trigger: TGGGTTCAGGTGACGCTGGTTCAAAACAACAATCCAAACATTGCCATTACTGATGACAAAAGGCAAATACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS GCA 72 bp | TTCATGAGAGTTTTCACAGCCATGTTCAAGATTCCTTaGTTGGAGGTCTTCATATCGTATTTGCCTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FMRVFTAMFKIP*LEVFISYLPFV Trigger: GACAAAAGGCAAATACGATATGAAGACCTCCAAGCAAGGAATCTTGAACATGGCTGTGAAAACTCTCATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 72 bp | CTTCATGAGAGTTTTCACAGCCATGTTCAAGATTCCTaGCTTGGAGGTCTTCATATCGTATTTGCCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LHESFHSHVQDS*LGGLHIVFAFC Trigger: ACAAAAGGCAAATACGATATGAAGACCTCCAAGCAAGGAATCTTGAACATGGCTGTGAAAACTCTCATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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| CDS CAA 72 bp | TTCCTTGCTTGGAGGTCTTCATATCGTATTTGCCTTTaGTCATCAGTAATGGCAATGTTTGGATTGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: FLAWRSSYRICL*SSVMAMFGLLF Trigger: AAACAACAATCCAAACATTGCCATTACTGATGACAAAAGGCAAATACGATATGAAGACCTCCAAGCAAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059037.15 ENSMUST00000130139.3 |
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