Pregenerated sensors for TRIM12A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066258Ensembl transcript IDs: ENSMUST00000070943.7, ENSMUST00000106837.8, ENSMUST00000106839.9
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGACCAGAGTCCCTGCATTGCCATCTATTGGTGGCCTAGAGTTTTaGCAGTACTTAGGACTCAAAAGTTTCCTCCTCTTTCCTGTATCT | + |
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Preference number: 1 (lower is better) Translates to: MTRVPALPSIGGLEF*QYLGLKSFLLFPVS Trigger: AGATACAGGAAAGAGGAGGAAACTTTTGAGTCCTAAGTACTGGCAAAACTCTAGGCCACCAATAGATGGCAATGCAGGGACTCTGGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR TCA 90 bp | AACAGAAAGGGAGGGGCTGCTGGTTGGTTTGGCTGGTTAAAACCAGTCCCTGGCCCACTTCTGCCTGGATaGAAGATCTCCCCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NRKGGAAGWFGWLKPVPGPLLPG*KISPSW Trigger: CCAGGAAGGGGAGATCTTTCATCCAGGCAGAAGTGG...GCCAGGGACTGGTTTTAACCAGCCAAACCAACCAGCAGCCCCTCCCTTTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCAAAGATCTCCCCTTCCTaGCCAGAGGTGAGGGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSCICWFGVSVSPPHPQPKISPS*PEVRVQ Trigger: TTGGACCCTCACCTCTGGCCAGGAAGGGGAGATCTT...TGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCAGGGAGGGGCTGCTGGTTaGTTTGGCTGGTTAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: FPVSAGLEFQFLPHTPSQGGAAG*FGWLKP Trigger: TGGTTTTAACCAGCCAAACCAACCAGCAGCCCCTCC...CTGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTGGCTGCCTTCTTGCTGAGTGGAATCTTCCCTTAACATGGTCTTTACCCCTTCCTGGCCAGAGGTaGGGGTCCAAAGATGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: VCGCLLAEWNLPLTWSLPLPGQR*GSKDVC Trigger: GCACACATCTTTGGACCCTCACCTCTGGCCAGGAAG...GGGTAAAGACCATGTTAAGGGAAGATTCCACTCAGCAAGAAGGCAGCCACAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR GCA 90 bp | AACAGAAAGGGAGGGGCTGCTGGTTGGTTTGGCTGGTTAAAACCAGTCCCTGGCGGGTCCAAAGATGTGTaGGAAAATTTGTCCATGGCG | + |
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Preference number: 2 (lower is better) Translates to: NRKGGAAGWFGWLKPVPGGSKDV*ENLSMA Trigger: CGCCATGGACAAATTTTCGCACACATCTTTGGACCC...GCCAGGGACTGGTTTTAACCAGCCAAACCAACCAGCAGCCCCTCCCTTTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR CCA 90 bp | AACAGAAAGGGAGGGGCTGCTGGTTGGTTTGGCTGGTTAAAACCAGTCCCTGGCTTCACCACTTCTGCCTaGATGAAAGATCTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: NRKGGAAGWFGWLKPVPGFTTSA*MKDLPF Trigger: GAAGGGGAGATCTTTCATCCAGGCAGAAGTGGTGAA...GCCAGGGACTGGTTTTAACCAGCCAAACCAACCAGCAGCCCCTCCCTTTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR GCA 90 bp | AACAGAAAGGGAGGGGCTGCTGGTTGGTTTGGCTGGTTAAAACCAGTCCCTGGCTTTCTTCACCACTTCTaGCTGGATGAAAGATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: NRKGGAAGWFGWLKPVPGFLHHF*LDERSP Trigger: GGGAGATCTTTCATCCAGGCAGAAGTGGTGAAGAAA...GCCAGGGACTGGTTTTAACCAGCCAAACCAACCAGCAGCCCCTCCCTTTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCTTCACCACTTCTGCCTaGATGAAAGATCTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLFPVSAGLEFQFLPHTPFTTSA*MKDLPF Trigger: GAAGGGGAGATCTTTCATCCAGGCAGAAGTGGTGAA...GGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAGAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR TCA 90 bp | AACCCAGGCTTGCTGGAAGAGCAGCCAATGCTCTTAATTACTGAGCTACTGCAGGATCATTCCAGCCTCTaGAACCGAGTCAGCAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: NPGLLEEQPMLLITELLQDHSSL*NRVSKE Trigger: CTCTTTGCTGACTCGGTTTCAGAGGCTGGAATGATC...CTGCAGTAGCTCAGTAATTAAGAGCATTGGCTGCTCTTCCAGCAAGCCTGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| 3UTR-3UTR TCA 90 bp | GGCCTAGAGTTTTGCCAGTACTTAGGACTCAAAAGTTTCCTCCTCTTTCCTGTACTTCCTGGCCAGAGGTaGGGGTCCAAAGATGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GLEFCQYLGLKSFLLFPVLPGQR*GSKDVC Trigger: GCACACATCTTTGGACCCTCACCTCTGGCCAGGAAG...TACAGGAAAGAGGAGGAAACTTTTGAGTCCTAAGTACTGGCAAAACTCTAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCTCTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCGGGTCCAAAGATGTGTaGGAAAATTTGTCCATGGCG | + |
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Preference number: 2 (lower is better) Translates to: FLLFPVSAGLEFQFLPHTGSKDV*ENLSMA Trigger: CGCCATGGACAAATTTTCGCACACATCTTTGGACCC...GGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAGAGGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCGTGTTTCTTTTGAGTTTGTGGCTGCCTTCTTGCTGAGTGGAATCTTCCCTGCTGGTTGGTTTGGCTaGTTAAAACCAGTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SRVSFEFVAAFLLSGIFPAGWFG*LKPVPG Trigger: GCCAGGGACTGGTTTTAACCAGCCAAACCAACCAGC...AGGGAAGATTCCACTCAGCAAGAAGGCAGCCACAAACTCAAAAGAAACACGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR CCA 90 bp | CTATGGCCACCAAAAAGCTCTTCCTGGCCGCTGAAAACTTCTCCTCTAGCCTTGCTTTCCTGTATCTGCTaGTTTGGAGTTTCAGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LWPPKSSSWPLKTSPLALLSCIC*FGVSVS Trigger: AGAAACTGAAACTCCAAACCAGCAGATACAGGAAAG...CAAGGCTAGAGGAGAAGTTTTCAGCGGCCAGGAAGAGCTTTTTGGTGGCCATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR GCA 90 bp | CCAATGCTCTTAATTACTGAGCTACTGCAGATGAATAAAGCCTTAGATTATCCTCTTCTTATTTGTGCATaGAGTGATCATTCCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PMLLITELLQMNKALDYPLLICA*SDHSSL Trigger: GAGGCTGGAATGATCACTGCATGCACAAATAAGAAG...AGGATAATCTAAGGCTTTATTCATCTGCAGTAGCTCAGTAATTAAGAGCATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTAGATTATCCTATGATGTACAACATCAACATCTCTTAGTAGTTCCTTTCTATTTGTGCATGCAGTaGTCATTCCAGCCTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLRLSYDVQHQHLLVVPFYLCMQ*SFQPLK Trigger: TTTCAGAGGCTGGAATGATCACTGCATGCACAAATA...GAAAGGAACTACTAAGAGATGTTGATGTTGTACATCATAGGATAATCTAAGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| 3UTR-3UTR CAA 90 bp | CTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCAGGGAGGGGCTGCTGGTaGGTTTGGCTGGTTAAAACC | + |
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Preference number: 3 (lower is better) Translates to: LSCICWFGVSVSPPHPQPGRGCW*VWLVKT Trigger: GGTTTTAACCAGCCAAACCAACCAGCAGCCCCTCCC...TGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR TCA 72 bp | TTCCTGGCCGCTGAAAACTTCTCCTCTAGCCTTGGATaGCCAGAGTCCCTGCATTGCCATCTATTGGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: FLAAENFSSSLG*PESLHCHLLVA Trigger: GGCCACCAATAGATGGCAATGCAGGGACTCTGGTCATCCAAGGCTAGAGGAGAAGTTTTCAGCGGCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR TCA 72 bp | GAGAGGGTGTTGGATTCCCTAGCACTGGAGTTACTTTaGGTTGCAATGTGGGTACTGGGAATGGAACCCAGG | + |
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Preference number: 3 (lower is better) Translates to: ERVLDSLALELL*VAMWVLGMEPR Trigger: CCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAAGTAACTCCAGTGCTAGGGAATCCAACACCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| 3UTR GCA 72 bp | GGTGTTGGATTCCCTAGCACTGGAGTTACTTTGAGTTaGAATGTGGGTACTGGGAATGGAACCCAGGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GVGFPSTGVTLS*NVGTGNGTQAC Trigger: GCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAAGTAACTCCAGTGCTAGGGAATCCAACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| 3UTR GCA 72 bp | CTTAGGACTCAAAAGTTTCCTCCTCTTTCCTGTATCTaGTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCC | + |
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Preference number: 3 (lower is better) Translates to: LRTQKFPPLSCI*WFGVSVSPPHP Trigger: GGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAGAGGAGGAAACTTTTGAGTCCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR GCA 72 bp | AAAACTTCTCCTCTAGCCTTGGATGACCAGAGTCCCTaGATTGCCATCTATTGGTGGCCTAGAGTTTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: KTSPLALDDQSP*IAIYWWPRVLP Trigger: TGGCAAAACTCTAGGCCACCAATAGATGGCAATGCAGGGACTCTGGTCATCCAAGGCTAGAGGAGAAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR-3UTR CAA 90 bp | ACTTTGAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGGAAGAGCATTAGTAAAAGGTACTaGAATCACACAGAGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TLSCNVGTGNGTQACWKSISKRY*NHTELC Trigger: ACAGAGCTCTGTGTGATTCAAGTACCTTTTACTAAT...GCTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| 3UTR TCA 72 bp | CTCGTGTTTCTTTTGAGTTTGTGGCTGCCTTCTTGCTaGGTGGAATCTTCCCTTAACATGGTCTTTACCCAC | + |
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Preference number: 3 (lower is better) Translates to: LVFLLSLWLPSC*VESSLNMVFTH Trigger: GTGGGTAAAGACCATGTTAAGGGAAGATTCCACTCAGCAAGAAGGCAGCCACAAACTCAAAAGAAACACGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR TCA 72 bp | ACATCAACATCTCTTAGTAGTTCCTTTCTTTGGCAGTaGCTAACTGGAATTAGTAAAAGGTACTTGAATCAC | + |
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Preference number: 3 (lower is better) Translates to: TSTSLSSSFLWQ*LTGISKRYLNH Trigger: GTGATTCAAGTACCTTTTACTAATTCCAGTTAGTCACTGCCAAAGAAAGGAACTACTAAGAGATGTTGATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR TCA 90 bp | TTTGAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGGAAGAGCAGGGCTTCCATGCCTTCTaGCTCTCAGACCCTGGGACG | + |
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Preference number: 4 (lower is better) Translates to: FELQCGYWEWNPGLLEEQGFHAF*LSDPGT Trigger: CGTCCCAGGGTCTGAGAGTCAGAAGGCATGGAAGCC...CTGCTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR GCA 90 bp | GCTTTTCTTCACCACTTCTGCCTGGATGAAAGATCTCCCCTTCCTGGCCAGAGGAGAACTACCTGCAGCTaGTCCTTGTACTCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AFLHHFCLDERSPLPGQRRTTCS*SLYSWA Trigger: GGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCT...CCTCTGGCCAGGAAGGGGAGATCTTTCATCCAGGCAGAAGTGGTGAAGAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | CTTTTCTTCACCACTTCTGCCTGGATGAAAGATCTCCCCTTCCTGGCCAGAGGTACTTGCAGCATGCCTTaGAGGTCAGGGGCTCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LFFTTSAWMKDLPFLARGTCSMP*RSGARN Trigger: GTTCCGAGCCCCTGACCTGCAAGGCATGCTGCAAGT...ACCTCTGGCCAGGAAGGGGAGATCTTTCATCCAGGCAGAAGTGGTGAAGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | GAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGGAAGAGCAGCCACAGTTAAACACTTTCTaGTCCTCTTCTGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ELQCGYWEWNPGLLEEQPQLNTF*SSSGLG Trigger: GCCCAGCCCAGAAGAGGAGCAGAAAGTGTTTAACTG...TGGCTGCTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR GCA 90 bp | TTTGAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGGAAGAGCAGAGAACTACCTGCAGCTaGTCCTTGTACTCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FELQCGYWEWNPGLLEEQRTTCS*SLYSWA Trigger: GGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCT...CTGCTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR GCA 90 bp | TTCTTCACCACTTCTGCCTGGATGAAAGATCTCCCCTTCCTGGCCAGAGGTGAGTCTGCCATCAGCCTTTaGAGAACTACCTGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FFTTSAWMKDLPFLARGESAISL*RTTCSC Trigger: GCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGA...CTCACCTCTGGCCAGGAAGGGGAGATCTTTCATCCAGGCAGAAGTGGTGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | TTCCTCCTCTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCACTTGCAGCATGCCTTaGAGGTCAGGGGCTCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: FLLFPVSAGLEFQFLPHTTCSMP*RSGARN Trigger: GTTCCGAGCCCCTGACCTGCAAGGCATGCTGCAAGT...GGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAGAGGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCAGACCTCTTGCAGCACTTaGAGCATGCCTTGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FPVSAGLEFQFLPHTPSQTSCST*SMPCRS Trigger: TGACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGT...CTGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | CTATGGCCACCAAAAAGCTCTTCCTGGCCGCTGAAAACTTCTCCTCTAGCCTTGGCCTCTGTGACCTCTTaGAGCACTTGCAGCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: LWPPKSSSWPLKTSPLALASVTS*STCSMP Trigger: AGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGC...CAAGGCTAGAGGAGAAGTTTTCAGCGGCCAGGAAGAGCTTTTTGGTGGCCATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR CAA 72 bp | AGCTCTTCCTGGCCGCTGAAAACTTCTCCTCTAGCCTaGGATGACCAGAGTCCCTGCATTGCCATCTATTGG | + |
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Preference number: 4 (lower is better) Translates to: SSSWPLKTSPLA*DDQSPCIAIYW Trigger: CCAATAGATGGCAATGCAGGGACTCTGGTCATCCAAGGCTAGAGGAGAAGTTTTCAGCGGCCAGGAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | CTCCCCTTCCTGGCCAGAGGTGAGGGTCCAAAGATGTGTGCGAAAATTTGTCCACAGTTAAACACTTTCTaGTCCTCTTCTGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LPFLARGEGPKMCAKICPQLNTF*SSSGLG Trigger: GCCCAGCCCAGAAGAGGAGCAGAAAGTGTTTAACTG...TGGACAAATTTTCGCACACATCTTTGGACCCTCACCTCTGGCCAGGAAGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | AACCCAGGCTTGCTGGAAGAGCAGCCAATGCTCTTAATTACTGAGCTACTGCAGGGGCAATGGCTTCCATaGCTTCTGACTCTCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: NPGLLEEQPMLLITELLQGQWLP*LLTLRP Trigger: GGGTCTGAGAGTCAGAAGGCATGGAAGCCATTGCCC...CTGCAGTAGCTCAGTAATTAAGAGCATTGGCTGCTCTTCCAGCAAGCCTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR GCA 90 bp | TTCCTCCTCTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCGCCTCTGTGACCTCTTaGAGCACTTGCAGCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: FLLFPVSAGLEFQFLPHTASVTS*STCSMP Trigger: AGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGC...GGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAGAGGAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | CTCCCCTTCCTGGCCAGAGGTGAGGGTCCAAAGATGTGTGCGAAAATTTGTCCAGGTGTGACCACAATCTaGACTCACAGGTTTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LPFLARGEGPKMCAKICPGVTTI*THRFHH Trigger: ATGGTGAAACCTGTGAGTGCAGATTGTGGTCACACC...TGGACAAATTTTCGCACACATCTTTGGACCCTCACCTCTGGCCAGGAAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | TACTTTGAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGGAAGAGTCTGCCATCAGCCTTTaGAGAACTACCTGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YFELQCGYWEWNPGLLEESAISL*RTTCSC Trigger: GCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGA...CTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR GCA 90 bp | TTCCTCCTCTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCACCTCTTGCAGCACTTaGAGCATGCCTTGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FLLFPVSAGLEFQFLPHTTSCST*SMPCRS Trigger: TGACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGT...GGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAGAGGAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCAGAACAGAAAGGGCACACAGGGCAAATaGACACTTTCTTATCGCATT | + |
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Preference number: 4 (lower is better) Translates to: SAGLEFQFLPHTPSQNRKGTQGK*TLSYRI Trigger: AATGCGATAAGAAAGTGTTCATTTGCCCTGTGTGCC...CTTTCTGTTCTGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | ACTTTGAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGGAAGAGCGGTGTGACCACAATCTaGACTCACAGGTTTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: TLSCNVGTGNGTQACWKSGVTTI*THRFHH Trigger: ATGGTGAAACCTGTGAGTGCAGATTGTGGTCACACC...GCTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCAGAACAGAAAGTCTTGCCTCAGCTTCTaGAATTCCTTCTTCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SAGLEFQFLPHTPSQNRKSCLSF*NSFFSS Trigger: TGAGGAGAAGAAGGAATTGCAGAAGCTGAGGCAAGA...CTTTCTGTTCTGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | GCTTTTCTTCACCACTTCTGCCTGGATGAAAGATCTCCCCTTCCTGGCCAGAGGTCTTGCCTCAGCTTCTaGAATTCCTTCTTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AFLHHFCLDERSPLPGQRSCLSF*NSFFSS Trigger: TGAGGAGAAGAAGGAATTGCAGAAGCTGAGGCAAGA...CCTCTGGCCAGGAAGGGGAGATCTTTCATCCAGGCAGAAGTGGTGAAGAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | CTCCTCTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCATGTCTTCCTTCTCTTaGCTCAGCTTCTGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFPVSAGLEFQFLPHTPMSSFS*LSFCNS Trigger: GGAATTGCAGAAGCTGAGGCAAGAGAAGGAAGACAT...GGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAGAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| 3UTR CAA 72 bp | GAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTaGCTGGAAGAGCAGCCAATGCTCTTAATTACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELQCGYWEWNPG*LEEQPMLLITE Trigger: CTCAGTAATTAAGAGCATTGGCTGCTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR CCA 90 bp | TACTTTGAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGGAAGAGTTTCTGCTCCTCTTCTaGGCTGGGCTTGAACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFELQCGYWEWNPGLLEEFLLLF*AGLEHF Trigger: AAAATGTTCAAGCCCAGCCCAGAAGAGGAGCAGAAA...CTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR CCA 90 bp | GCTGCTGGTTGGTTTGGCTGGTTAAAACCAGTCCCTGGCTTTTCTTCACCACTTTTTCTGCTCCTCTTCTaGGCTGGGCTTGAACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAGWFGWLKPVPGFSSPLFLLLF*AGLEHF Trigger: AAAATGTTCAAGCCCAGCCCAGAAGAGGAGCAGAAA...AAGTGGTGAAGAAAAGCCAGGGACTGGTTTTAACCAGCCAAACCAACCAGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR TCA 90 bp | CTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCACTTTCTTATCGCATTTaGTGGATTCAAAGTACAACG | + |
|
Preference number: 4 (lower is better) Translates to: LSCICWFGVSVSPPHPQPLSYRI*WIQSTT Trigger: CGTTGTACTTTGAATCCATCAAATGCGATAAGAAAG...TGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR TCA 90 bp | CTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCATTCATCGAAAAAGTATaGCTCCGTTCTATGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCICWFGVSVSPPHPQPFIEKV*LRSMMF Trigger: GAACATCATAGAACGGAGTCATACTTTTTCGATGAA...TGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | TCTCGTGTTTCTTTTGAGTTTGTGGCTGCCTTCTTGCTGAGTGGAATCTTCCCTGGTGTGACCACAATCTaGACTCACAGGTTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVSFEFVAAFLLSGIFPGVTTI*THRFHH Trigger: ATGGTGAAACCTGTGAGTGCAGATTGTGGTCACACC...AGGGAAGATTCCACTCAGCAAGAAGGCAGCCACAAACTCAAAAGAAACACGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | GCTTTTCTTCACCACTTCTGCCTGGATGAAAGATCTCCCCTTCCTGGCCAGAGGTTTCTTTCCATGTCTTaGACAGTTAAACACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLHHFCLDERSPLPGQRFLSMS*TVKHFL Trigger: CAGAAAGTGTTTAACTGTGCAAGACATGGAAAGAAA...CCTCTGGCCAGGAAGGGGAGATCTTTCATCCAGGCAGAAGTGGTGAAGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | CTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCATTTCTTTCCATGTCTTaGACAGTTAAACACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSCICWFGVSVSPPHPQPFLSMS*TVKHFL Trigger: CAGAAAGTGTTTAACTGTGCAAGACATGGAAAGAAA...TGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | TCTCGTGTTTCTTTTGAGTTTGTGGCTGCCTTCTTGCTGAGTGGAATCTTCCCTATGTCTTCCTTCTCTTaGCTCAGCTTCTGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRVSFEFVAAFLLSGIFPMSSFS*LSFCNS Trigger: GGAATTGCAGAAGCTGAGGCAAGAGAAGGAAGACAT...AGGGAAGATTCCACTCAGCAAGAAGGCAGCCACAAACTCAAAAGAAACACGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR TCA 90 bp | TACTTTGAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGGAAGAGCTTTCTTATCGCATTTaGTGGATTCAAAGTACAACG | + |
|
Preference number: 4 (lower is better) Translates to: YFELQCGYWEWNPGLLEELSYRI*WIQSTT Trigger: CGTTGTACTTTGAATCCATCAAATGCGATAAGAAAG...CTCTTCCAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR TCA 90 bp | GGCCTAGAGTTTTGCCAGTACTTAGGACTCAAAAGTTTCCTCCTCTTTCCTGTAGGCACACAGGGCAAATaGACACTTTCTTATCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLEFCQYLGLKSFLLFPVGTQGK*TLSYRI Trigger: AATGCGATAAGAAAGTGTTCATTTGCCCTGTGTGCC...TACAGGAAAGAGGAGGAAACTTTTGAGTCCTAAGTACTGGCAAAACTCTAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR CCA 90 bp | GGCCTAGAGTTTTGCCAGTACTTAGGACTCAAAAGTTTCCTCCTCTTTCCTGTATTTCTGCTCCTCTTCTaGGCTGGGCTTGAACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLEFCQYLGLKSFLLFPVFLLLF*AGLEHF Trigger: AAAATGTTCAAGCCCAGCCCAGAAGAGGAGCAGAAA...TACAGGAAAGAGGAGGAAACTTTTGAGTCCTAAGTACTGGCAAAACTCTAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR GCA 90 bp | CTAACTGGAATTAGTAAAAGGTACTTGAATCACACAGAGCTCTGTAGAGAGCTGTCTTGCCTCAGCTTCTaGAATTCCTTCTTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGISKRYLNHTELCRELSCLSF*NSFFSS Trigger: TGAGGAGAAGAAGGAATTGCAGAAGCTGAGGCAAGA...CAGCTCTCTACAGAGCTCTGTGTGATTCAAGTACCTTTTACTAATTCCAGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR TCA 90 bp | GGCCTAGAGTTTTGCCAGTACTTAGGACTCAAAAGTTTCCTCCTCTTTCCTGTATTCATCGAAAAAGTATaGCTCCGTTCTATGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLEFCQYLGLKSFLLFPVFIEKV*LRSMMF Trigger: GAACATCATAGAACGGAGTCATACTTTTTCGATGAA...TACAGGAAAGAGGAGGAAACTTTTGAGTCCTAAGTACTGGCAAAACTCTAGGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR TCA 90 bp | CCAATGCTCTTAATTACTGAGCTACTGCAGATGAATAAAGCCTTAGATTATCCTGGCACACAGGGCAAATaGACACTTTCTTATCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PMLLITELLQMNKALDYPGTQGK*TLSYRI Trigger: AATGCGATAAGAAAGTGTTCATTTGCCCTGTGTGCC...AGGATAATCTAAGGCTTTATTCATCTGCAGTAGCTCAGTAATTAAGAGCATTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR GCA 90 bp | TTATCCTATGATGTACAACATCAACATCTCTTAGTAGTTCCTTTCTTTGGCAGTATGTCTTCCTTCTCTTaGCTCAGCTTCTGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSYDVQHQHLLVVPFFGSMSSFS*LSFCNS Trigger: GGAATTGCAGAAGCTGAGGCAAGAGAAGGAAGACAT...ACTGCCAAAGAAAGGAACTACTAAGAGATGTTGATGTTGTACATCATAGGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR GCA 90 bp | CTAACTGGAATTAGTAAAAGGTACTTGAATCACACAGAGCTCTGTAGAGAGCTGTTTCTTTCCATGTCTTaGACAGTTAAACACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGISKRYLNHTELCRELFLSMS*TVKHFL Trigger: CAGAAAGTGTTTAACTGTGCAAGACATGGAAAGAAA...CAGCTCTCTACAGAGCTCTGTGTGATTCAAGTACCTTTTACTAATTCCAGTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS GCA 90 bp | CACCAGGAAGACCACAGCAGCAGAGAGGAAGGGCAATGGCTTCCATaGCTTCTGACTCTCAGACCCTGGGACGTCCTGCAGCCTTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: HQEDHSSREEGQWLP*LLTLRPWDVLQPYL Trigger: CAGGTAAGGCTGCAGGACGTCCCAGGGTCTGAGAGTCAGAAGGCATGGAAGCCATTGCCCTTCCTCTCTGCTGCTGTGGTCTTCCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS CCA 90 bp | CACTGTCATCACCAGGAAGACCACAGCAGCAGAGAGGAAGGGCAATaGCTTCCATGCCTTCTGACTCTCAGACCCTGGGACGTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HCHHQEDHSSREEGQ*LPCLLTLRPWDVLQ Trigger: CTGCAGGACGTCCCAGGGTCTGAGAGTCAGAAGGCATGGAAGCCATTGCCCTTCCTCTCTGCTGCTGTGGTCTTCCTGGTGATGACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR CAA 90 bp | CTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCAACCTGCAGCTGCTCCTaGTACTCCTGGGCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSCICWFGVSVSPPHPQPTCSCS*YSWATS Trigger: AGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGT...TGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106839.9 |
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| CDS-3UTR CAA 90 bp | TGGAGTTACTTTGAGTTGCAATGTGGGTACTGGGAATGGAACCCAGGCTTGCTGACCTGCAGCTGCTCCTaGTACTCCTGGGCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WSYFELQCGYWEWNPGLLTCSCS*YSWATS Trigger: AGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGT...CAGCAAGCCTGGGTTCCATTCCCAGTACCCACATTGCAACTCAAAGTAACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR CAA 90 bp | TGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCAGCCAGAACAGAAAGGGTCTTCTGGGCTGGGCTaGAACATTTTGAGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CWFGVSVSPPHPQPEQKGSSGLG*NILSLS Trigger: AGAGAGGCTCAAAATGTTCAAGCCCAGCCCAGAAGA...CCCTTTCTGTTCTGGCTGGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR CAA 90 bp | AACCCAGGCTTGCTGGAAGAGCAGCCAATGCTCTTAATTACTGAGCTACTGCAGTCTTCTGGGCTGGGCTaGAACATTTTGAGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NPGLLEEQPMLLITELLQSSGLG*NILSLS Trigger: AGAGAGGCTCAAAATGTTCAAGCCCAGCCCAGAAGA...CTGCAGTAGCTCAGTAATTAAGAGCATTGGCTGCTCTTCCAGCAAGCCTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS-3UTR CAA 90 bp | GTTTGTGGCTGCCTTCTTGCTGAGTGGAATCTTCCCTTAACATGGTCTTTACCCTCTTCTGGGCTGGGCTaGAACATTTTGAGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCGCLLAEWNLPLTWSLPSSGLG*NILSLS Trigger: AGAGAGGCTCAAAATGTTCAAGCCCAGCCCAGAAGA...GGGTAAAGACCATGTTAAGGGAAGATTCCACTCAGCAAGAAGGCAGCCACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS-3UTR CAA 90 bp | CTCCTCTTTCCTGTATCTGCTGGTTTGGAGTTTCAGTTTCTCCCCCACACCCCCCACATCTTTCTGTATTaGATTCTTGTACTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFPVSAGLEFQFLPHTPHIFLY*ILVLLG Trigger: GCCCAGGAGTACAAGAATCAAATACAGAAAGATGTG...GGGGGTGTGGGGGAGAAACTGAAACTCCAAACCAGCAGATACAGGAAAGAGGAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000106837.8 |
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| CDS GCA 90 bp | CATCATGTCCTTCCTACAGAAGAGCTGGAGTTTCTTTCCATGTCTTaGACAGTTAAACACTTTCTGCTCCTCTTCTGGGCTGGGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HHVLPTEELEFLSMS*TVKHFLLLFWAGLE Trigger: TTCAAGCCCAGCCCAGAAGAGGAGCAGAAAGTGTTTAACTGTGCAAGACATGGAAAGAAACTCCAGCTCTTCTGTAGGAAGGACATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070943.7 ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS TCA 90 bp | TCCTGCAGCCTTACCTGCAGTATTTCTATGTCTGAGCACTGTAACTaGTGTTCCACATCTGAGATGAAGTCTTCTAGCAACTTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSLTCSISMSEHCN*CSTSEMKSSSNLLC Trigger: GCAGAGCAAGTTGCTAGAAGACTTCATCTCAGATGTGGAACATCAGTTACAGTGCTCAGACATAGAAATACTGCAGGTAAGGCTGCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS TCA 90 bp | CGATGGCTTTGGGCTTCTTCATCGAAAAAGTATGACTCCGTTCTATaGTGTTCTCCACACCCTGCAGTATTTCTATGTCTGAGCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RWLWASSSKKYDSVL*CSPHPAVFLCLSTV Trigger: TACAGTGCTCAGACATAGAAATACTGCAGGGTGTGGAGAACATCATAGAACGGAGTCATACTTTTTCGATGAAGAAGCCCAAAGCCATCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS TCA 72 bp | GCAGCAGAGAGGAAGGGCAATGGCTTCCATGCCTTCTaGCTCTCAGACCCTGGGACGTCCTGCAGCCTTACC | + |
|
Preference number: 6 (lower is better) Translates to: AAERKGNGFHAF*LSDPGTSCSLT Trigger: GGTAAGGCTGCAGGACGTCCCAGGGTCTGAGAGTCAGAAGGCATGGAAGCCATTGCCCTTCCTCTCTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070943.7 |
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| CDS CAA 72 bp | CTAGTAGCGATGAGCCTCTGTGACCTCTTGCAGCACTaGCAGCATGCCTTGCAGGTCAGGGGCTCGGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: LVAMSLCDLLQH*QHALQVRGSEL Trigger: AAGTTCCGAGCCCCTGACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCTCATCGCTACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS CAA 72 bp | AGCCTCTGTGACCTCTTGCAGCACTTGCAGCATGCCTaGCAGGTCAGGGGCTCGGAACTTTCTTTGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLCDLLQHLQHA*QVRGSELSLFP Trigger: AGGGAACAAAGAAAGTTCCGAGCCCCTGACCTGCAAGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS CAA 72 bp | GCCATCAGCCTTTGCAGAACTACCTGCAGCTGCTCCTaGTACTCCTGGGCCACCTCTTCAATGAGAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AISLCRTTCSCS*YSWATSSMRAV Trigger: AACAGCTCTCATTGAAGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070943.7 ENSMUST00000106839.9 |
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| CDS CCA 72 bp | GGTCAGGGGCTCGGAACTTTCTTTGTTCCCTGGCGATaGCTTTGGGCTTCTTCATCGAAAAAGTATGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GQGLGTFFVPWR*LWASSSKKYDS Trigger: GGAGTCATACTTTTTCGATGAAGAAGCCCAAAGCCATCGCCAGGGAACAAAGAAAGTTCCGAGCCCCTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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| CDS GCA 72 bp | TTTTTCTTATCTGCCATCAGCCTTTGCAGAACTACCTaGAGCTGCTCCTTGTACTCCTGGGCCACCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FFLSAISLCRTT*SCSLYSWATSS Trigger: TGAAGAGGTGGCCCAGGAGTACAAGGAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGATAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070943.7 ENSMUST00000106839.9 |
||
| CDS CCA 72 bp | CTTGCAGGTCAGGGGCTCGGAACTTTCTTTGTTCCCTaGCGATGGCTTTGGGCTTCTTCATCGAAAAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LAGQGLGTFFVP*RWLWASSSKKY Trigger: ATACTTTTTCGATGAAGAAGCCCAAAGCCATCGCCAGGGAACAAAGAAAGTTCCGAGCCCCTGACCTGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
||
| CDS TCA 72 bp | CTGGCGATGGCTTTGGGCTTCTTCATCGAAAAAGTATaGCTCCGTTCTATGATGTTCTCCACACCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LAMALGFFIEKV*LRSMMFSTPCS Trigger: ACTGCAGGGTGTGGAGAACATCATAGAACGGAGTCATACTTTTTCGATGAAGAAGCCCAAAGCCATCGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
||
| CDS CAA 72 bp | GGGCTGGGCTTGAACATTTTGAGCCTCTCTACTATGTaGGCCACATTTCGATTAGGCCTCAGATTGCTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GLGLNILSLSTM*ATFRLGLRLLN Trigger: GTTTAGCAATCTGAGGCCTAATCGAAATGTGGCCAACATAGTAGAGAGGCTCAAAATGTTCAAGCCCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070943.7 ENSMUST00000106837.8 ENSMUST00000106839.9 |
||
| CDS TCA 72 bp | TGTCTGAGCACTGTAACTGATGTTCCACATCTGAGATaGAGTCTTCTAGCAACTTGCTCTGCTGAGCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLSTVTDVPHLR*SLLATCSAEHA Trigger: AGCATGCTCAGCAGAGCAAGTTGCTAGAAGACTTCATCTCAGATGTGGAACATCAGTTACAGTGCTCAGACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070943.7 ENSMUST00000106837.8 ENSMUST00000106839.9 |
||
| CDS CAA 72 bp | CGGCACACAGGGCAAATGAACACTTTCTTATCGCATTaGATGGATTCAAAGTACAACGTGATGCAGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RHTGQMNTFLSH*MDSKYNVMQPW Trigger: CCAAGGCTGCATCACGTTGTACTTTGAATCCATCAAATGCGATAAGAAAGTGTTCATTTGCCCTGTGTGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070943.7 ENSMUST00000106837.8 ENSMUST00000106839.9 |
||
| CDS GCA 72 bp | AGTTTCTTTCCATGTCTTGCACAGTTAAACACTTTCTaGTCCTCTTCTGGGCTGGGCTTGAACATTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SFFPCLAQLNTF*SSSGLGLNILS Trigger: GCTCAAAATGTTCAAGCCCAGCCCAGAAGAGGAGCAGAAAGTGTTTAACTGTGCAAGACATGGAAAGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070943.7 ENSMUST00000106837.8 ENSMUST00000106839.9 |
||
| CDS TCA 72 bp | ACACCCTGCAGTATTTCTATGTCTGAGCACTGTAACTaGTGTTCCACATCTGAGATGAAGTCTTCTAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TPCSISMSEHCN*CSTSEMKSSSN Trigger: GTTGCTAGAAGACTTCATCTCAGATGTGGAACATCAGTTACAGTGCTCAGACATAGAAATACTGCAGGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106837.8 ENSMUST00000106839.9 |
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