RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIB3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032715

Ensembl transcript IDs: ENSMUST00000040312.7

Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAAGGCAGGGGCTGGCCGGAGAGCATGCGGCACTGTGGCAACTTaGCCAGCAAGGTATATTTCTCCCTCTTTTTCCTTTGCTGTTCAC +
Preference number: 1 (lower is better)
Translates to: PKAGAGRRACGTVAT*PARYISPSFSFAVH
Trigger: GTGAACAGCAAAGGAAAAAGAGGGAGAAATATACCTTGCTGGCCAAGTTGCCACAGTGCCGCATGCTCTCCGGCCAGCCCCTGCCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR TCA 90 bp TTCAAACAGGTTCTCCTGCCTGGAGGCCACAATCCCAGCCCGGCCTaGTTTGTGGTCCTGAGGCACATGGTGAGTGAGGACTTTGGTCTT +
Preference number: 1 (lower is better)
Translates to: FKQVLLPGGHNPSPA*FVVLRHMVSEDFGL
Trigger: AAGACCAAAGTCCTCACTCACCATGTGCCTCAGGACCACAAATCAGGCCGGGCTGGGATTGTGGCCTCCAGGCAGGAGAACCTGTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR TCA 90 bp TCCTTGAGTCAGATGCCTCTTTATTGGAGTCTCATCCTTTTGGCTTaGATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: SLSQMPLYWSLILLA*IPQPSLLQTGSPAW
Trigger: CCAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAAAGAGGCATCTGACTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 90 bp GCCCAAGGCAGGGGCTGGCCGGAGAGCATGCGGCACTGTGGCAACTaGGCCAGCAAGGTATATTTCTCCCTCTTTTTCCTTTGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: AQGRGWPESMRHCGN*ASKVYFSLFFLCCS
Trigger: TGAACAGCAAAGGAAAAAGAGGGAGAAATATACCTTGCTGGCCAAGTTGCCACAGTGCCGCATGCTCTCCGGCCAGCCCCTGCCTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 90 bp CTGTGGCAACTTGGCCAGCAAGGTATATTTCTCCCTCTTTTTCCTTaGCTGTTCACAGCACCTAGAGCAGGGCGTGGCACTCAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: LWQLGQQGIFLPLFP*LFTAPRAGRGTQGA
Trigger: TGCTCCCTGAGTGCCACGCCCTGCTCTAGGTGCTGTGAACAGCAAAGGAAAAAGAGGGAGAAATATACCTTGCTGGCCAAGTTGCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR-3UTR CCA 90 bp GGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGGAGGCCGGCACTGTGGCAACTTaGCCAGCAAGGTATATTTCT +
Preference number: 2 (lower is better)
Translates to: GLNPTAKSSSNRFSCLEAGTVAT*PARYIS
Trigger: AGAAATATACCTTGCTGGCCAAGTTGCCACAGTGCC...GGCCTCCAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 90 bp GCACGCCGGCTGTTTCTTCCTCCAGAAAGGCACTTAAGGTTTAGCTaGGCCCAAAAAGTCAGGAGAAAGCTGAGACTCAGGTACTCAACT +
Preference number: 2 (lower is better)
Translates to: ARRLFLPPERHLRFS*AQKVRRKLRLRYST
Trigger: AGTTGAGTACCTGAGTCTCAGCTTTCTCCTGACTTTTTGGGCCAAGCTAAACCTTAAGTGCCTTTCTGGAGGAAGAAACAGCCGGCGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR-3UTR TCA 90 bp AACCACACAGCTCTCTTTTATTGGGCACATGATGAAAATACACACTTAACCAGAAATCCCAGCCCGGCCTaGTTTGTGGTCCTGAGGCAC +
Preference number: 2 (lower is better)
Translates to: NHTALFYWAHDENTHLTRNPSPA*FVVLRH
Trigger: GTGCCTCAGGACCACAAATCAGGCCGGGCTGGGATT...TCTGGTTAAGTGTGTATTTTCATCATGTGCCCAATAAAAGAGAGCTGTGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 90 bp TTCCTTGAGTCAGATGCCTCTTTATTGGAGTCTCATCCTTTTGGCTaGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: FLESDASLLESHPFG*NPTAKSSSNRFSCL
Trigger: CAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAAAGAGGCATCTGACTCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR-3UTR TCA 90 bp ATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGAAGTCAGGAGAAAGCTaGGACTCAGGTACTCAACTC +
Preference number: 2 (lower is better)
Translates to: IGVSSFWLESHSQVFFKQKSGES*DSGTQL
Trigger: GAGTTGAGTACCTGAGTCTCAGCTTTCTCCTGACTT...CTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR-3UTR CCA 90 bp ATTCCAGACTATTCCTTGAGTCAGATGCCTCTTTATTGGAGTCTCATCCTTTTGAAGACAGAAGGCAGCTaGGGCACTGATAAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: IPDYSLSQMPLYWSLILLKTEGS*GTDKRD
Trigger: GTCCCTTTTATCAGTGCCCCAGCTGCCTTCTGTCTT...CAAAAGGATGAGACTCCAATAAAGAGGCATCTGACTCAAGGAATAGTCTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR-3UTR GCA 90 bp ATTCCAGACTATTCCTTGAGTCAGATGCCTCTTTATTGGAGTCTCATCCTTTTGTCCCTCTTTTTCCTTTaGTGTTCACAGCACCTAGAG +
Preference number: 2 (lower is better)
Translates to: IPDYSLSQMPLYWSLILLSLFFL*CSQHLE
Trigger: CTCTAGGTGCTGTGAACAGCAAAGGAAAAAGAGGGA...CAAAAGGATGAGACTCCAATAAAGAGGCATCTGACTCAAGGAATAGTCTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CCA 72 bp CCAAGGCAGGGGCTGGCCGGAGAGCATGCGGCACTGTaGCAACTTGGCCAGCAAGGTATATTTCTCCCTCTT +
Preference number: 3 (lower is better)
Translates to: PRQGLAGEHAAL*QLGQQGIFLPL
Trigger: AAGAGGGAGAAATATACCTTGCTGGCCAAGTTGCCACAGTGCCGCATGCTCTCCGGCCAGCCCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CCA 72 bp CCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTaGAGGCCACAATCCCAGCCCGGCCTGATTTGTGGT +
Preference number: 3 (lower is better)
Translates to: PQPSLLQTGSPA*RPQSQPGLICG
Trigger: ACCACAAATCAGGCCGGGCTGGGATTGTGGCCTCCAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR-3UTR CAA 90 bp TTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGGACGGCACTGTGGCAACTaGGCCAGCAAGGTATATTTC +
Preference number: 3 (lower is better)
Translates to: FWLESHSQVFFKQVLLPGRHCGN*ASKVYF
Trigger: GAAATATACCTTGCTGGCCAAGTTGCCACAGTGCCG...TCCAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR-3UTR CAA 90 bp CCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGCTCCCTCTTTTTCCTTaGCTGTTCACAGCACCTAGA +
Preference number: 3 (lower is better)
Translates to: PFGLNPTAKSSSNRFSCLLPLFP*LFTAPR
Trigger: TCTAGGTGCTGTGAACAGCAAAGGAAAAAGAGGGAG...CAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR TCA 72 bp CAGATGCCTCTTTATTGGAGTCTCATCCTTTTGGCTTaGATCCCACAGCCAAGTCTTCTTCAAACAGGTTCT +
Preference number: 3 (lower is better)
Translates to: QMPLYWSLILLA*IPQPSLLQTGS
Trigger: AGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAAAGAGGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR-3UTR CAA 90 bp TTATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACACAGAGATGTTTCCTTaGTTTAAAGGCACAAGACAG +
Preference number: 3 (lower is better)
Translates to: LLESHPFGLNPTAKSSSNTEMFP*FKGTRQ
Trigger: CTGTCTTGTGCCTTTAAACAAAGGAAACATCTCTGT...GTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR GCA 90 bp GGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGGAGGCCGTGGGACGGGCCACATaGTGGTGGGTAGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLNPTAKSSSNRFSCLEAVGRAT*WWVGSR
Trigger: CCGGCTGCCTACCCACCAGCATGTGGCCCGTCCCAC...GGCCTCCAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 72 bp GTAGGACAGACCCTGCCTGGTCCTCCCCCTCCAACTTaGGTGCTTCAGCCGGAGGCTACCAGGGTAAACAGA +
Preference number: 4 (lower is better)
Translates to: VGQTLPGPPPPT*VLQPEATRVNR
Trigger: TCTGTTTACCCTGGTAGCCTCCGGCTGAAGCACCAAAGTTGGAGGGGGAGGACCAGGCAGGGTCTGTCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CCA 90 bp GGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGGAGGCCAGCCTCCTCCAGCTGTaGCCCATCTGGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: GLNPTAKSSSNRFSCLEASLLQL*PIWDHL
Trigger: CAGGTGGTCCCAGATGGGCCACAGCTGGAGGAGGCT...GGCCTCCAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CCA 90 bp CCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGGGACGGGCCACATGCTaGTGGGTAGGCAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PFGLNPTAKSSSNRFSCLGRATC*WVGSRA
Trigger: TGCCCGGCTGCCTACCCACCAGCATGTGGCCCGTCC...CAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR GCA 90 bp CCTCCAGAAAGGCACTTAAGGTTTAGCTTGGCCCAAAAAGTCAGGAGAAAGCTGCAGCCGGGCATAAGGTaGCAGCACCGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPERHLRFSLAQKVRRKLQPGIR*QHRLGL
Trigger: GAGGCCCAGGCGGTGCTGGCACCTTATGCCCGGCTG...CAGCTTTCTCCTGACTTTTTGGGCCAAGCTAAACCTTAAGTGCCTTTCTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 72 bp AGGGGCTGGCCGGAGAGCATGCGGCACTGTGGCAACTaGGCCAGCAAGGTATATTTCTCCCTCTTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGWPESMRHCGN*ASKVYFSLFFL
Trigger: AAGGAAAAAGAGGGAGAAATATACCTTGCTGGCCAAGTTGCCACAGTGCCGCATGCTCTCCGGCCAGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR TCA 90 bp AGGTTTAGCTTGGCCCAAAAAGTCAGGAGAAAGCTGAGACTCAGGTACTCAACTTGCCAGCCAGCATGGTaGAGAGCGCCACACCCAGGC +
Preference number: 4 (lower is better)
Translates to: RFSLAQKVRRKLRLRYSTCQPAW*RAPHPG
Trigger: GCCTGGGTGTGGCGCTCTTCACCATGCTGGCTGGCA...AGTTGAGTACCTGAGTCTCAGCTTTCTCCTGACTTTTTGGGCCAAGCTAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR GCA 90 bp ATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGGATACCGCGGCGGCTaGGCACCAGGCTGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: IGVSSFWLESHSQVFFKQGYRGG*APGCAS
Trigger: ACTTGCACAGCCTGGTGCGCAGCCGCCGCGGTATCC...CTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CCA 90 bp ATTCCAGACTATTCCTTGAGTCAGATGCCTCTTTATTGGAGTCTCATCCTTTTGGGTGCCAGCACCGCCTaGGCCTCGCTGGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: IPDYSLSQMPLYWSLILLGASTA*ASLAGY
Trigger: GTACCCTGCCAGCGAGGCCCAGGCGGTGCTGGCACC...CAAAAGGATGAGACTCCAATAAAGAGGCATCTGACTCAAGGAATAGTCTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR GCA 90 bp TTATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACTGCAGGTGTACTCTGTaGCTGTGGGGCAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLESHPFGLNPTAKSSSNCRCTL*LWGSAG
Trigger: CCCTGCACTGCCCCACAGGCACAGAGTACACCTGCA...GTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CCA 90 bp ATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGCCATCTGGGACCACCTaGTCCATCTCCCTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: IGVSSFWLESHSQVFFKQPSGTT*SISLRS
Trigger: TGACCGAAGGGAGATGGACCAGGTGGTCCCAGATGG...CTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR GCA 90 bp CCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGCCAACGGTTTCTTCCTaGAGGAAACATCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PFGLNPTAKSSSNRFSCLPTVSS*RKHQQK
Trigger: CTTCTGCTGATGTTTCCTGCAGGAAGAAACCGTTGG...CAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR GCA 90 bp TTATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACGTGCTTGTGGCAGTGTaGCACGGCACTAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LLESHPFGLNPTAKSSSNVLVAV*HGTSHL
Trigger: CAGATGGCTAGTGCCGTGGCACACTGCCACAAGCAC...GTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR GCA 90 bp ATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGTCTCTCAACCAGGGATaGAAGAGGATTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IGVSSFWLESHSQVFFKQSLNQG*KRIPRA
Trigger: GGCCCTGGGAATCCTCTTGCATCCCTGGTTGAGAGA...CTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CCA 90 bp TTATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACGGAGCTGAGTATCTCTaGTCCCACGTAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLESHPFGLNPTAKSSSNGAEYL*SHVGRA
Trigger: TGCCCTGCCTACGTGGGACCAGAGATACTCAGCTCC...GTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 72 bp GTGAGGACTTTGGTCTTTGGCACAGAGATGTTTCCTTaGTTTAAAGGCACAAGACAGAAGGCAGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VRTLVFGTEMFP*FKGTRQKAAGA
Trigger: TGCCCCAGCTGCCTTCTGTCTTGTGCCTTTAAACAAAGGAAACATCTCTGTGCCAAAGACCAAAGTCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 72 bp CTGTTTCTTCCTCCAGAAAGGCACTTAAGGTTTAGCTaGGCCCAAAAAGTCAGGAGAAAGCTGAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: LFLPPERHLRFS*AQKVRRKLRLR
Trigger: CCTGAGTCTCAGCTTTCTCCTGACTTTTTGGGCCAAGCTAAACCTTAAGTGCCTTTCTGGAGGAAGAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR TCA 90 bp AACCACACAGCTCTCTTTTATTGGGCACATGATGAAAATACACACTTAACCAGACCACAGAGAGTCATCTaGTCCAGTCATCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: NHTALFYWAHDENTHLTRPQRVI*SSHHAG
Trigger: GCCTGCGTGATGACTGGATCAGATGACTCTCTGTGG...TCTGGTTAAGTGTGTATTTTCATCATGTGCCCAATAAAAGAGAGCTGTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR TCA 90 bp AACCACACAGCTCTCTTTTATTGGGCACATGATGAAAATACACACTTAACCAGATCCTCTCACAGTTGCTaGAGACAAAGCGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: NHTALFYWAHDENTHLTRSSHSC*RQSDAA
Trigger: AGCTGCGTCGCTTTGTCTTCAGCAACTGTGAGAGGA...TCTGGTTAAGTGTGTATTTTCATCATGTGCCCAATAAAAGAGAGCTGTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CCA 90 bp AACCACACAGCTCTCTTTTATTGGGCACATGATGAAAATACACACTTAACCAGATTTGCCAGAGTAGGATaGCCGGGAGCTGAGTATCTC +
Preference number: 4 (lower is better)
Translates to: NHTALFYWAHDENTHLTRFARVG*PGAEYL
Trigger: GAGATACTCAGCTCCCGGCCATCCTACTCTGGCAAA...TCTGGTTAAGTGTGTATTTTCATCATGTGCCCAATAAAAGAGAGCTGTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 72 bp TCAGATGCCTCTTTATTGGAGTCTCATCCTTTTGGCTaGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: SDASLLESHPFG*NPTAKSSSNRF
Trigger: GAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAAAGAGGCATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
3UTR CAA 72 bp TATTCCAGACTATTCCTTGAGTCAGATGCCTCTTTATaGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: YSRLFLESDASL*ESHPFGLNPTA
Trigger: GGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAAAGAGGCATCTGACTCAAGGAATAGTCTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CCA 90 bp CACGGCACTAGCCATCTGCCGGAAGAGCCCGGCAGCCTCGGACTCTaGGATACCGCGGCGGCTGCGCACCAGGCTGTGCAAGTCCCCATG +
Preference number: 5 (lower is better)
Translates to: HGTSHLPEEPGSLGL*DTAAAAHQAVQVPM
Trigger: CATGGGGACTTGCACAGCCTGGTGCGCAGCCGCCGCGGTATCCCAGAGTCCGAGGCTGCCGGGCTCTTCCGGCAGATGGCTAGTGCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 90 bp TGTGGGACGGGCCACATGCTGGTGGGTAGGCAGCCGGGCATAAGGTaGCAGCACCGCCTGGGCCTCGCTGGCAGGGTACACCTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: CGTGHMLVGRQPGIR*QHRLGLAGRVHLAG
Trigger: ACCTGCAAGGTGTACCCTGCCAGCGAGGCCCAGGCGGTGCTGGCACCTTATGCCCGGCTGCCTACCCACCAGCATGTGGCCCGTCCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 90 bp AAGACAAGCCCGTGCTTGTGGCAGTGTGCCACGGCACTAGCCATCTaGCGGAAGAGCCCGGCAGCCTCGGACTCTGGGATACCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: KTSPCLWQCATALAI*RKSPAASDSGIPRR
Trigger: CCGCCGCGGTATCCCAGAGTCCGAGGCTGCCGGGCTCTTCCGGCAGATGGCTAGTGCCGTGGCACACTGCCACAAGCACGGGCTTGTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 90 bp CCGCCTGGGCCTCGCTGGCAGGGTACACCTTGCAGGTGTACTCTGTaGCTGTGGGGCAGTGCAGGGCTCGATAGCTGCAGCTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: PPGPRWQGTPCRCTL*LWGSAGLDSCSCLA
Trigger: AGCAAGGCAGCTGCAGCTATCGAGCCCTGCACTGCCCCACAGGCACAGAGTACACCTGCAAGGTGTACCCTGCCAGCGAGGCCCAGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CCA 90 bp ACAAAGCGACGCAGCTTGAGGTCGCGCAAGACAAGCCCGTGCTTGTaGCAGTGTGCCACGGCACTAGCCATCTGCCGGAAGAGCCCGGCA +
Preference number: 5 (lower is better)
Translates to: TKRRSLRSRKTSPCL*QCATALAICRKSPA
Trigger: TGCCGGGCTCTTCCGGCAGATGGCTAGTGCCGTGGCACACTGCCACAAGCACGGGCTTGTCTTGCGCGACCTCAAGCTGCGTCGCTTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS TCA 90 bp CGCGGCGGCTGCGCACCAGGCTGTGCAAGTCCCCATGGGTCTTCGTaGAAAAGATGTAAAGGAGCCGAGAGCCCAGCAGGACCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: RGGCAPGCASPHGSS*KRCKGAESPAGPLW
Trigger: CCACAGAGGTCCTGCTGGGCTCTCGGCTCCTTTACATCTTTTTCACGAAGACCCATGGGGACTTGCACAGCCTGGTGCGCAGCCGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS TCA 90 bp GGCTCCAGACATCAGCCGCTTTGCCAGAGTAGGATGGCCGGGAGCTaGGTATCTCTGGTCCCACGTAGGCAGGGCACGCATGCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: GSRHQPLCQSRMAGS*VSLVPRRQGTHACP
Trigger: GGGACAAGCATGCGTGCCCTGCCTACGTGGGACCAGAGATACTCAGCTCCCGGCCATCCTACTCTGGCAAAGCGGCTGATGTCTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 90 bp GATGCAAGAGGATTCCCAGGGCCACAAGTCGCTCTGAAGGTTCCTTaGGGAGGAGACAGCGGATCAGACAGCGGGCTGGGGCTGATAGGC +
Preference number: 5 (lower is better)
Translates to: DARGFPGPQVALKVP*GGDSGSDSGLGLIG
Trigger: GCCTATCAGCCCCAGCCCGCTGTCTGATCCGCTGTCTCCTCCGCAAGGAACCTTCAGAGCGACTTGTGGCCCTGGGAATCCTCTTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CCA 90 bp ATCAGCCGCTTTGCCAGAGTAGGATGGCCGGGAGCTGAGTATCTCTaGTCCCACGTAGGCAGGGCACGCATGCTTGTCCCACAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: ISRFARVGWPGAEYL*SHVGRARMLVPQRV
Trigger: GACTCTCTGTGGGACAAGCATGCGTGCCCTGCCTACGTGGGACCAGAGATACTCAGCTCCCGGCCATCCTACTCTGGCAAAGCGGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS TCA 90 bp TGGTCCATCTCCCTTCGGTCAGACTGTGGAGGAGAGACTCGGCCGTaGTCCTCTCTCAACCAGGGATGCAAGAGGATTCCCAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: WSISLRSDCGGETRP*SSLNQGCKRIPRAT
Trigger: TGTGGCCCTGGGAATCCTCTTGCATCCCTGGTTGAGAGAGGATCACGGCCGAGTCTCTCCTCCACAGTCTGACCGAAGGGAGATGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 90 bp GGGCTGATAGGCCCTCAGGCAGGGCAAAGGTCCCTCTACGGATCTTaGCAAAGAGCAGGACTGGCTCAGAGTCGTGGAATGGGTATCTGC +
Preference number: 5 (lower is better)
Translates to: GLIGPQAGQRSLYGS*QRAGLAQSRGMGIC
Trigger: GCAGATACCCATTCCACGACTCTGAGCCAGTCCTGCTCTTTGGCAAGATCCGTAGAGGGACCTTTGCCCTGCCTGAGGGCCTATCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS TCA 90 bp TCCCACGTAGGCAGGGCACGCATGCTTGTCCCACAGAGAGTCATCTaGTCCAGTCATCACGCAGGCATCTTCCAGGTTCTCCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: SHVGRARMLVPQRVI*SSHHAGIFQVLQHQ
Trigger: CTGGTGCTGGAGAACCTGGAAGATGCCTGCGTGATGACTGGATCAGATGACTCTCTGTGGGACAAGCATGCGTGCCCTGCCTACGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CAA 90 bp TTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACAGGTTCTCCTGCCTGGAGAAGGCCCCAGTCGAGTaGCAGGGGCCACAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: FGLNPTAKSSSNRFSCLEKAPVE*QGPQQV
Trigger: CACCTGCTGTGGCCCCTGCAACTCGACTGGGGCCTT...CTCCAGGCAGGAGAACCTGTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CAA 90 bp CCAAAAAGTCAGGAGAAAGCTGAGACTCAGGTACTCAACTCACACCTTGGAGCTCGCTCTGAAGGTTCCTaGCGGAGGAGACAGCGGATC +
Preference number: 5 (lower is better)
Translates to: PKSQEKAETQVLNSHLGARSEGS*RRRQRI
Trigger: GATCCGCTGTCTCCTCCGCAAGGAACCTTCAGAGCG...AGCTCCAAGGTGTGAGTTGAGTACCTGAGTCTCAGCTTTCTCCTGACTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CAA 90 bp AGGTTTAGCTTGGCCCAAAAAGTCAGGAGAAAGCTGAGACTCAGGTACTCAACTGTCCCTCTACGGATCTaGCCAAAGAGCAGGACTGGC +
Preference number: 5 (lower is better)
Translates to: RFSLAQKVRRKLRLRYSTVPLRI*PKSRTG
Trigger: GCCAGTCCTGCTCTTTGGCAAGATCCGTAGAGGGAC...AGTTGAGTACCTGAGTCTCAGCTTTCTCCTGACTTTTTGGGCCAAGCTAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS-3UTR CAA 90 bp TTATTGGAGTCTCATCCTTTTGGCTTGAATCCCACAGCCAAGTCTTCTTCAAACCACTTGGCATCAATATaGTCATCAAACTCCAACGGT +
Preference number: 5 (lower is better)
Translates to: LLESHPFGLNPTAKSSSNHLASI*SSNSNG
Trigger: ACCGTTGGAGTTTGATGACAATATTGATGCCAAGTG...GTTTGAAGAAGACTTGGCTGTGGGATTCAAGCCAAAAGGATGAGACTCCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 72 bp GCCCGGCAGCCTCGGACTCTGGGATACCGCGGCGGCTaGGCACCAGGCTGTGCAAGTCCCCATGGGTCTTCG +
Preference number: 6 (lower is better)
Translates to: ARQPRTLGYRGG*APGCASPHGSS
Trigger: CGAAGACCCATGGGGACTTGCACAGCCTGGTGCGCAGCCGCCGCGGTATCCCAGAGTCCGAGGCTGCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 72 bp GAGGTCGCGCAAGACAAGCCCGTGCTTGTGGCAGTGTaGCACGGCACTAGCCATCTGCCGGAAGAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: EVAQDKPVLVAV*HGTSHLPEEPG
Trigger: GCCGGGCTCTTCCGGCAGATGGCTAGTGCCGTGGCACACTGCCACAAGCACGGGCTTGTCTTGCGCGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CCA 72 bp GCCGGGCATAAGGTGCCAGCACCGCCTGGGCCTCGCTaGCAGGGTACACCTTGCAGGTGTACTCTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: AGHKVPAPPGPR*QGTPCRCTLCL
Trigger: CAGGCACAGAGTACACCTGCAAGGTGTACCCTGCCAGCGAGGCCCAGGCGGTGCTGGCACCTTATGCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 72 bp CCGTGCTTGTGGCAGTGTGCCACGGCACTAGCCATCTaGCGGAAGAGCCCGGCAGCCTCGGACTCTGGGATA +
Preference number: 6 (lower is better)
Translates to: PCLWQCATALAI*RKSPAASDSGI
Trigger: TATCCCAGAGTCCGAGGCTGCCGGGCTCTTCCGGCAGATGGCTAGTGCCGTGGCACACTGCCACAAGCACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 72 bp CCTCGCTGGCAGGGTACACCTTGCAGGTGTACTCTGTaGCTGTGGGGCAGTGCAGGGCTCGATAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PRWQGTPCRCTL*LWGSAGLDSCS
Trigger: GCTGCAGCTATCGAGCCCTGCACTGCCCCACAGGCACAGAGTACACCTGCAAGGTGTACCCTGCCAGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 72 bp GGATTCCCAGGGCCACAAGTCGCTCTGAAGGTTCCTTaGGGAGGAGACAGCGGATCAGACAGCGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GFPGPQVALKVP*GGDSGSDSGLG
Trigger: CCCCAGCCCGCTGTCTGATCCGCTGTCTCCTCCGCAAGGAACCTTCAGAGCGACTTGTGGCCCTGGGAATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CCA 72 bp TCAGCCTCCTCCAGCTGTGGCCCATCTGGGACCACCTaGTCCATCTCCCTTCGGTCAGACTGTGGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: SASSSCGPSGTT*SISLRSDCGGE
Trigger: CTCTCCTCCACAGTCTGACCGAAGGGAGATGGACCAGGTGGTCCCAGATGGGCCACAGCTGGAGGAGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CAA 90 bp GGATGCAAGAGGATTCCCAGGGCCACAAGTCGCTCTGAAGGTTCCTaGCGGAGGAGACAGCGGATCAGACAGCGGGCTGGGGCTGATAGG +
Preference number: 6 (lower is better)
Translates to: GCKRIPRATSRSEGS*RRRQRIRQRAGADR
Trigger: CCTATCAGCCCCAGCCCGCTGTCTGATCCGCTGTCTCCTCCGCAAGGAACCTTCAGAGCGACTTGTGGCCCTGGGAATCCTCTTGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS TCA 72 bp CATCAGCCGCTTTGCCAGAGTAGGATGGCCGGGAGCTaGGTATCTCTGGTCCCACGTAGGCAGGGCACGCAT +
Preference number: 6 (lower is better)
Translates to: HQPLCQSRMAGS*VSLVPRRQGTH
Trigger: ATGCGTGCCCTGCCTACGTGGGACCAGAGATACTCAGCTCCCGGCCATCCTACTCTGGCAAAGCGGCTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS GCA 72 bp GGCCCTCAGGCAGGGCAAAGGTCCCTCTACGGATCTTaGCAAAGAGCAGGACTGGCTCAGAGTCGTGGAATG +
Preference number: 6 (lower is better)
Translates to: GPQAGQRSLYGS*QRAGLAQSRGM
Trigger: CATTCCACGACTCTGAGCCAGTCCTGCTCTTTGGCAAGATCCGTAGAGGGACCTTTGCCCTGCCTGAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CAA 90 bp ACCAGCTTCGTCCTCTCACAGTTGCTGAAGACAAAGCGACGCAGCTaGAGGTCGCGCAAGACAAGCCCGTGCTTGTGGCAGTGTGCCACG +
Preference number: 6 (lower is better)
Translates to: TSFVLSQLLKTKRRS*RSRKTSPCLWQCAT
Trigger: CGTGGCACACTGCCACAAGCACGGGCTTGTCTTGCGCGACCTCAAGCTGCGTCGCTTTGTCTTCAGCAACTGTGAGAGGACGAAGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CAA 90 bp GGGGCTGATAGGCCCTCAGGCAGGGCAAAGGTCCCTCTACGGATCTaGCCAAAGAGCAGGACTGGCTCAGAGTCGTGGAATGGGTATCTG +
Preference number: 6 (lower is better)
Translates to: GADRPSGRAKVPLRI*PKSRTGSESWNGYL
Trigger: CAGATACCCATTCCACGACTCTGAGCCAGTCCTGCTCTTTGGCAAGATCCGTAGAGGGACCTTTGCCCTGCCTGAGGGCCTATCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CAA 72 bp GTCCTCTCACAGTTGCTGAAGACAAAGCGACGCAGCTaGAGGTCGCGCAAGACAAGCCCGTGCTTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: VLSQLLKTKRRS*RSRKTSPCLWQ
Trigger: CTGCCACAAGCACGGGCTTGTCTTGCGCGACCTCAAGCTGCGTCGCTTTGTCTTCAGCAACTGTGAGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS CAA 72 bp AGGCCCTCAGGCAGGGCAAAGGTCCCTCTACGGATCTaGCCAAAGAGCAGGACTGGCTCAGAGTCGTGGAAT +
Preference number: 6 (lower is better)
Translates to: RPSGRAKVPLRI*PKSRTGSESWN
Trigger: ATTCCACGACTCTGAGCCAGTCCTGCTCTTTGGCAAGATCCGTAGAGGGACCTTTGCCCTGCCTGAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS TCA 72 bp TGCGCACCAGGCTGTGCAAGTCCCCATGGGTCTTCGTaGAAAAGATGTAAAGGAGCCGAGAGCCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: CAPGCASPHGSS*KRCKGAESPAG
Trigger: TCCTGCTGGGCTCTCGGCTCCTTTACATCTTTTTCACGAAGACCCATGGGGACTTGCACAGCCTGGTGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7
CDS TCA 72 bp GGCAGGGCACGCATGCTTGTCCCACAGAGAGTCATCTaGTCCAGTCATCACGCAGGCATCTTCCAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: GRARMLVPQRVI*SSHHAGIFQVL
Trigger: GAGAACCTGGAAGATGCCTGCGTGATGACTGGATCAGATGACTCTCTGTGGGACAAGCATGCGTGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040312.7