Pregenerated sensors for TRIB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020601Ensembl transcript IDs: ENSMUST00000020922.8, ENSMUST00000221215.2, ENSMUST00000221518.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAATCAAGGGTAAATCCATGGCAGCTTGGTCTCCTGATTATCAGTaGGGAAGCTGTCCTCCTGGGGACAGGGGCTCCAGTGGAGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: RIKGKSMAAWSPDYQ*GSCPPGDRGSSGVG Trigger: GCCTACTCCACTGGAGCCCCTGTCCCCAGGAGGACAGCTTCCCCACTGATAATCAGGAGACCAAGCTGCCATGGATTTACCCTTGATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR TCA 90 bp | AAAGATCTGACTCCAGGAGGCGCCTGCCCTCTGGGAGCCCCTCACTaGATTTGGAGCAGAGAGCAATGTCTACAATGTGAACCCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: KDLTPGGACPLGAPH*IWSREQCLQCEPSS Trigger: GGAAGAGGGTTCACATTGTAGACATTGCTCTCTGCTCCAAATTCAGTGAGGGGCTCCCAGAGGGCAGGCGCCTCCTGGAGTCAGATCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR GCA 90 bp | GACAGAGAGCTGTTTGTATGTATATCATCCTGGCTTTTGGCTTATTaGCCGTTTACTCTTTCTGTTCAAACCAGAGGGCCTTTCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: DRELFVCISSWLLAY*PFTLSVQTRGPFQA Trigger: GGCTTGGAAAGGCCCTCTGGTTTGAACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR CCA 90 bp | CGTATTGGGACAGAGAGCTGTTTGTATGTATATCATCCTGGCTTTTaGCTTATTGCCCGTTTACTCTTTCTGTTCAAACCAGAGGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: RIGTESCLYVYHPGF*LIARLLFLFKPEGL Trigger: AAGGCCCTCTGGTTTGAACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTCCCAATACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR CCA 90 bp | CTCTCTGTATCTTCCATTATCAAAATAGAATCAAGGGTAAATCCATaGCAGCTTGGTCTCCTGATTATCAGTGGGGAAGCTGTCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LSVSSIIKIESRVNP*QLGLLIISGEAVLL Trigger: CAGGAGGACAGCTTCCCCACTGATAATCAGGAGACCAAGCTGCCATGGATTTACCCTTGATTCTATTTTGATAATGGAAGATACAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR CCA 90 bp | CAAGGTGCGTATTGGGACAGAGAGCTGTTTGTATGTATATCATCCTaGCTTTTGGCTTATTGCCCGTTTACTCTTTCTGTTCAAACCAGA | + |
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Preference number: 1 (lower is better) Translates to: QGAYWDRELFVCISS*LLAYCPFTLSVQTR Trigger: TCTGGTTTGAACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTCCCAATACGCACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTCCCAGAACTCCTTTCTaGGGCTCTCTCTTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HLNPTPIPHVLFPCYVFRPRTPF*GSLLLL Trigger: CAGGAGCAAGAGAGAGCCCCAGAAAGGAGTTCTGGG...ACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGCAGGCAGGAAAACCCAAACGACTGAGGTACTGGGAACACAAATATTTGAGGCGCCTGCCCTCTaGGAGCCCCTCACTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: TDAGRKTQTTEVLGTQIFEAPAL*EPLTEF Trigger: AAATTCAGTGAGGGGCTCCCAGAGGGCAGGCGCCTC...AAATATTTGTGTTCCCAGTACCTCAGTCGTTTGGGTTTTCCTGCCTGCATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAAAACAGATGCTGGGAGCCCCTCACTaGATTTGGAGCAGAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: TRVHVSPTQKQDHFTKQMLGAPH*IWSREQ Trigger: TTGCTCTCTGCTCCAAATTCAGTGAGGGGCTCCCAG...CATCTGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAAACAGATGCAGGCAGGAAAACCCAAACGACTGAGGTACTGGGAACACAAAAACAGAAATGTCTGTaGAGGAACAGACTCCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HKTDAGRKTQTTEVLGTQKQKCL*RNRLPL Trigger: GAGGGGGAGTCTGTTCCTCCACAGACATTTCTGTTT...TTGTGTTCCCAGTACCTCAGTCGTTTGGGTTTTCCTGCCTGCATCTGTTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGGCGTGAAGCATCCAAGAGTCCGCACACACATGCCACATACTAGAGTGAAGGTATGTATATCATCCTaGCTTTTGGCTTATTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: VGVKHPRVRTHMPHTRVKVCISS*LLAYCP Trigger: CGGGCAATAAGCCAAAAGCCAGGATGATATACATAC...CTTCACTCTAGTATGTGGCATGTGTGTGCGGACTCTTGGATGCTTCACGCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR CAA 90 bp | GGACAGAGAGCTGTTTGTATGTATATCATCCTGGCTTTTGGCTTATaGCCCGTTTACTCTTTCTGTTCAAACCAGAGGGCCTTTCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GQRAVCMYIILAFGL*PVYSFCSNQRAFPS Trigger: GCTTGGAAAGGCCCTCTGGTTTGAACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR CAA 90 bp | GCGTATTGGGACAGAGAGCTGTTTGTATGTATATCATCCTGGCTTTaGGCTTATTGCCCGTTTACTCTTTCTGTTCAAACCAGAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: AYWDRELFVCISSWL*AYCPFTLSVQTRGP Trigger: AGGCCCTCTGGTTTGAACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTCCCAATACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAAAACAGATGAACATGTCATCCCGTTaGCCCGTAATTGAAGTACTG | + |
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Preference number: 2 (lower is better) Translates to: TRVHVSPTQKQDHFTKQMNMSSR*PVIEVL Trigger: CAGTACTTCAATTACGGGTCAACGGGATGACATGTT...CATCTGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACCCAGGTTTCAGGTCAGTCTGTGTGCACCGAATTATTATTATTTTTAGGTGCCAAGGTAGGTGTTTaGGGCAGAAGAGTTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: STQVSGQSVCTELLLFLGAKVGV*GRRVWI Trigger: AATCCAAACTCTTCTGCCTCAAACACCTACCTTGGC...ACCTAAAAATAATAATAATTCGGTGCACACAGACTGACCTGAAACCTGGGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAACATTTACACACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTATACATCTGGAAGTTTaGCTTCTGATAGTTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SNIYTLESTCHLPKNRTIIHLEV*LLIVSC Trigger: GCAGGAAACTATCAGAAGTCAAACTTCCAGATGTAT...AATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTGTGTAAATGTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR CAA 90 bp | ATTTTCCTTAATAAATACAAGGTGCGTATTGGGACAGAGAGCTGTTaGTATGTATATCATCCTGGCTTTTGGCTTATTGCCCGTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: IFLNKYKVRIGTESC*YVYHPGFWLIARLL Trigger: GAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTCCCAATACGCACCTTGTATTTATTAAGGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR CCA 90 bp | GAGATTAGGACAAAAACATTAAACCAAATACAGGACAAAGCACCAGAGGCCATTGAACAAAATGAAAAGTaGGGTAGAATAGCCCTACTG | + |
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Preference number: 2 (lower is better) Translates to: EIRTKTLNQIQDKAPEAIEQNEK*GRIALL Trigger: CAGTAGGGCTATTCTACCCCACTTTTCATTTTGTTC...AATGGCCTCTGGTGCTTTGTCCTGTATTTGGTTTAATGTTTTTGTCCTAATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR CAA 90 bp | ACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAAAACAGATGTTGAGGCAGAAGAGTTaGGATTCTATCGAGATCTGC | + |
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Preference number: 3 (lower is better) Translates to: TRVHVSPTQKQDHFTKQMLRQKS*DSIEIC Trigger: GCAGATCTCGATAGAATCCAAACTCTTCTGCCTCAA...CATCTGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR-3UTR CAA 90 bp | AGCACCCAGGTTTCAGGTCAGTCTGTGTGCACCGAATTATTATTATTTTTAGGTTGCCAAGGTAGGTGTTaGAGGCAGAAGAGTTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: STQVSGQSVCTELLLFLGCQGRC*RQKSLD Trigger: ATCCAAACTCTTCTGCCTCAAACACCTACCTTGGCA...ACCTAAAAATAATAATAATTCGGTGCACACAGACTGACCTGAAACCTGGGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR CCA 72 bp | ACAGAGAGCTGTTTGTATGTATATCATCCTGGCTTTTaGCTTATTGCCCGTTTACTCTTTCTGTTCAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: TESCLYVYHPGF*LIARLLFLFKP Trigger: TGGTTTGAACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| 3UTR CCA 72 bp | TATTGGGACAGAGAGCTGTTTGTATGTATATCATCCTaGCTTTTGGCTTATTGCCCGTTTACTCTTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: YWDRELFVCISS*LLAYCPFTLSV Trigger: AACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTCCCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR TCA 90 bp | GCTCCCGTCCATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACCGAGGTCAGCCGCTCTaGCGGCTCCCGTCGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: APVHLNPTPIPHVLFPCYRGQPL*RLPSQD Trigger: ATCCTGCGACGGGAGCCGTCAGAGCGGCTGACCTCG...GTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATGGACGGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGGAAGAGAAGCTTAGGGGAGGGGCTCCCGTCCATCTGAACCCAACCCCCGCTCCACACGTCCGCTaGCTTGCCCGAATAACTGCC | + |
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Preference number: 4 (lower is better) Translates to: PREEKLRGGAPVHLNPTPAPHVR*LARITA Trigger: GGCAGTTATTCGGGCAAGGCAGCGGACGTGTGGAGC...GGGGGTTGGGTTCAGATGGACGGGAGCCCCTCCCCTAAGCTTCTCTTCCCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAAGAGAAGCTTAGGGGAGGGGCTCCCGTCCATCTGAACCCAACCCCCTGGGCTGACATACGCTaGGCAGCCATGCTTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PREEKLRGGAPVHLNPTPWADIR*AAMLVR Trigger: TCTGACAAGCATGGCTGCCCAGCGTATGTCAGCCCA...GGGGGTTGGGTTCAGATGGACGGGAGCCCCTCCCCTAAGCTTCTCTTCCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGGGGCTCTCTCTTGCTCCTGGTACCTGCTATGTGTCCCTGGGCCTTGAGGCAGGATGCTTCGGATaGGGCACTTGGCCTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLGLSLAPGTCYVSLGLEAGCFG*GTWPWE Trigger: CTCCCAAGGCCAAGTGCCTCATCCGAAGCATCCTGC...CTCAAGGCCCAGGGACACATAGCAGGTACCAGGAGCAAGAGAGAGCCCCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR GCA 90 bp | GCTCCCGTCCATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACTCTCCGCTGTGCAGATaGACAGCGCGGAAAACGTGG | + |
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Preference number: 4 (lower is better) Translates to: APVHLNPTPIPHVLFPCYSPLCR*TARKTW Trigger: CCACGTTTTCCGCGCTGTGCATCTGCACAGCGGAGA...GTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATGGACGGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGGGGCTCTCTCTTGCTCCTGGTACCTGCTATGTGTCCCTGGGCCTTGAGACAGCGCGGAAAACGTaGTCTCCCTCCAGAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FLGLSLAPGTCYVSLGLETARKT*SPSRGS Trigger: GGAGCCTCTGGAGGGAGACCACGTTTTCCGCGCTGT...CTCAAGGCCCAGGGACACATAGCAGGTACCAGGAGCAAGAGAGAGCCCCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR CCA 90 bp | GCTCCCGTCCATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACCTCCATGTTGACGTCTaGCACCAGCTGGTCACACGC | + |
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Preference number: 4 (lower is better) Translates to: APVHLNPTPIPHVLFPCYLHVDV*HQLVTR Trigger: GCGTGTGACCAGCTGGTGCCAGACGTCAACATGGAG...GTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATGGACGGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR TCA 90 bp | CATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTGCAGGATGCTTCGGATaGGGCACTTGGCCTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HLNPTPIPHVLFPCYVFRAGCFG*GTWPWE Trigger: CTCCCAAGGCCAAGTGCCTCATCCGAAGCATCCTGC...ACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR GCA 90 bp | AGATCAGCATCATCAAAAAGATCTGACTCCAGGAGGCGCCTGCCCTCTGGGAGCGCTCCACACGTCCGCTaGCTTGCCCGAATAACTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSASSKRSDSRRRLPSGSAPHVR*LARITA Trigger: GGCAGTTATTCGGGCAAGGCAGCGGACGTGTGGAGC...GCTCCCAGAGGGCAGGCGCCTCCTGGAGTCAGATCTTTTTGATGATGCTGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR TCA 90 bp | TTTCTGGGGCTCTCTCTTGCTCCTGGTACCTGCTATGTGTCCCTGGGCCTTGAGAGTTCTCCTCCATGTTaGCGTCTGGCACCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FLGLSLAPGTCYVSLGLESSPPC*RLAPAG Trigger: ACCAGCTGGTGCCAGACGTCAACATGGAGGAGAACT...CTCAAGGCCCAGGGACACATAGCAGGTACCAGGAGCAAGAGAGAGCCCCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR CCA 90 bp | TCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTCACTCCATGTTGACGTCTaGCACCAGCTGGTCACACGC | + |
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Preference number: 4 (lower is better) Translates to: SEPNPHPTRLVPMLRVPSLHVDV*HQLVTR Trigger: GCGTGTGACCAGCTGGTGCCAGACGTCAACATGGAG...TGACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| 3UTR CAA 72 bp | CCCGTCCATCTGAACCCAACCCCCATCCCACACGTCTaGTTCCCATGCTACGTGTTCCGTCAGCTCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: PVHLNPTPIPHV*FPCYVFRQLLE Trigger: TTCTAGGAGCTGACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATGGACGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGGGGCTCTCTCTTGCTCCTGGTACCTGCTATGTGTCCCTGGGCCTTGAGGAGTTTCTGGAATGTTaGACTGGCCCCTGCGGATCT | + |
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Preference number: 4 (lower is better) Translates to: FLGLSLAPGTCYVSLGLEEFLEC*TGPCGS Trigger: AGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTC...CTCAAGGCCCAGGGACACATAGCAGGTACCAGGAGCAAGAGAGAGCCCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR GCA 90 bp | GCTCCCGTCCATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACCCTTGCCCGAATAACTaGCGCTGGTGTTCAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: APVHLNPTPIPHVLFPCYPCPNN*RWCSRS Trigger: AGATCTTGAACACCAGCGGCAGTTATTCGGGCAAGG...GTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATGGACGGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGGGGCTCTCTCTTGCTCCTGGTACCTGCTATGTGTCCCTGGGCCTTGAGAACGCCCCACCAACATaGTGTACAGCATTACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: FLGLSLAPGTCYVSLGLENAPPT*CTALPP Trigger: TGGGGGTAATGCTGTACACCATGTTGGTGGGGCGTT...CTCAAGGCCCAGGGACACATAGCAGGTACCAGGAGCAAGAGAGAGCCCCAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR CCA 90 bp | GCTCCCGTCCATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACTCTGGAATGTTGAACTaGCCCCTGCGGATCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: APVHLNPTPIPHVLFPCYSGMLN*PLRILL Trigger: CAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGA...GTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATGGACGGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR TCA 90 bp | ACAGATGCAGGCAGGAAAACCCAAACGACTGAGGTACTGGGAACACAAATATTTCGAGGTCAGCCGCTCTaGCGGCTCCCGTCGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TDAGRKTQTTEVLGTQIFRGQPL*RLPSQD Trigger: ATCCTGCGACGGGAGCCGTCAGAGCGGCTGACCTCG...AAATATTTGTGTTCCCAGTACCTCAGTCGTTTGGGTTTTCCTGCCTGCATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR CCA 90 bp | TCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTCACCGAATAACTGCCGCTaGTGTTCAAGATCTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SEPNPHPTRLVPMLRVPSPNNCR*CSRSLG Trigger: GCCCAGAGATCTTGAACACCAGCGGCAGTTATTCGG...TGACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR TCA 90 bp | AGATCAGCATCATCAAAAAGATCTGACTCCAGGAGGCGCCTGCCCTCTGGGAGCCCAAACTCTCCAGCTTaGCACGAGTCCTCTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RSASSKRSDSRRRLPSGSPNSPA*HESSLH Trigger: ATGAAGAGAGGACTCGTGTCAAGCTGGAGAGTTTGG...GCTCCCAGAGGGCAGGCGCCTCCTGGAGTCAGATCTTTTTGATGATGCTGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR GCA 90 bp | CATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTCCTTGCCCGAATAACTaGCGCTGGTGTTCAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: HLNPTPIPHVLFPCYVFRPCPNN*RWCSRS Trigger: AGATCTTGAACACCAGCGGCAGTTATTCGGGCAAGG...ACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR CCA 90 bp | CATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTGGGAGACAGAGTTTCTaGAATGTTGAACTGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: HLNPTPIPHVLFPCYVFRGRQSF*NVELAP Trigger: AGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCC...ACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR GCA 90 bp | CACAAAACAGATGCAGGCAGGAAAACCCAAACGACTGAGGTACTGGGAACACAAAGCTCCTCTCCGCTGTaGAGATGCACAGCGCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: HKTDAGRKTQTTEVLGTQSSSPL*RCTARK Trigger: TTTCCGCGCTGTGCATCTGCACAGCGGAGAGGAGCT...TTGTGTTCCCAGTACCTCAGTCGTTTGGGTTTTCCTGCCTGCATCTGTTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR GCA 90 bp | GTAGGCGTGAAGCATCCAAGAGTCCGCACACACATGCCACATACTAGAGTGAAGTACGCTGGGCAGCCATaGTTGTCAGAGAGTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VGVKHPRVRTHMPHTRVKYAGQP*LSESES Trigger: TGACTCACTCTCTGACAAGCATGGCTGCCCAGCGTA...CTTCACTCTAGTATGTGGCATGTGTGTGCGGACTCTTGGATGCTTCACGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR GCA 90 bp | TGTAAATATGAATGTCCGTCTTGCTTCTCAGCCAGGCCACCTGTGTCCCAGAACTGGTCCAGAATTTCCTaGGAGGTCAGCCGCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CKYECPSCFSARPPVSQNWSRIS*EVSRSD Trigger: GTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCA...GTTCTGGGACACAGGTGGCCTGGCTGAGAAGCAAGACGGACATTCATATTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGCGTGAAGCATCCAAGAGTCCGCACACACATGCCACATACTAGAGTGAAGGGTGTTCAAGATCTCTaGGCTGACATACGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGVKHPRVRTHMPHTRVKGVQDL*ADIRWA Trigger: TGCCCAGCGTATGTCAGCCCAGAGATCTTGAACACC...CTTCACTCTAGTATGTGGCATGTGTGTGCGGACTCTTGGATGCTTCACGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAATCCATGGCAGCTTGGTCTCCTGATTATCAGTGGGGAAGCTGTCCTCCTAACGCCCCACCAACATaGTGTACAGCATTACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKSMAAWSPDYQWGSCPPNAPPT*CTALPP Trigger: TGGGGGTAATGCTGTACACCATGTTGGTGGGGCGTT...AGGAGGACAGCTTCCCCACTGATAATCAGGAGACCAAGCTGCCATGGATTTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR GCA 90 bp | CACAAAACAGATGCAGGCAGGAAAACCCAAACGACTGAGGTACTGGGAACACAATGGTCCAGAATTTCCTaGGAGGTCAGCCGCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HKTDAGRKTQTTEVLGTQWSRIS*EVSRSD Trigger: GTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCA...TTGTGTTCCCAGTACCTCAGTCGTTTGGGTTTTCCTGCCTGCATCTGTTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGGGCTCTCTCTTGCTCCTGGTACCTGCTATGTGTCCCTGGGCCTTGAGAGGATTTCCGTGATTTaGTTGATGTTGCTATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLGLSLAPGTCYVSLGLERISVI*LMLLWA Trigger: TGCCCATAGCAACATCAACCAAATCACGGAAATCCT...CTCAAGGCCCAGGGACACATAGCAGGTACCAGGAGCAAGAGAGAGCCCCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTAAATATGAATGTCCGTCTTGCTTCTCAGCCAGGCCACCTGTGTCCCAGCCGAATAACTGCCGCTaGTGTTCAAGATCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MCKYECPSCFSARPPVSQPNNCR*CSRSLG Trigger: GCCCAGAGATCTTGAACACCAGCGGCAGTTATTCGG...CTGGGACACAGGTGGCCTGGCTGAGAAGCAAGACGGACATTCATATTTACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CCA 90 bp | GGTAAATCCATGGCAGCTTGGTCTCCTGATTATCAGTGGGGAAGCTGTCCTCCTGGGAGACAGAGTTTCTaGAATGTTGAACTGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSMAAWSPDYQWGSCPPGRQSF*NVELAP Trigger: AGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCC...AGGAGGACAGCTTCCCCACTGATAATCAGGAGACCAAGCTGCCATGGATTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR GCA 90 bp | GGTAAATCCATGGCAGCTTGGTCTCCTGATTATCAGTGGGGAAGCTGTCCTCCTATGCAAGAAACGCAATaGGACAAGTTCGGAGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKSMAAWSPDYQWGSCPPMQETQ*DKFGVS Trigger: CGAGACTCCGAACTTGTCGCATTGCGTTTCTTGCAT...AGGAGGACAGCTTCCCCACTGATAATCAGGAGACCAAGCTGCCATGGATTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | TGTAAATATGAATGTCCGTCTTGCTTCTCAGCCAGGCCACCTGTGTCCCAGAACTGGTTGATGTTGCTATaGGCAGACAGGCAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKYECPSCFSARPPVSQNWLMLL*ADRQKQ Trigger: CTGCTTCTGCCTGTCTGCCCATAGCAACATCAACCA...GTTCTGGGACACAGGTGGCCTGGCTGAGAAGCAAGACGGACATTCATATTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGTGTAAATATGAATGTCCGTCTTGCTTCTCAGCCAGGCCACCTGTGTCCGGTGTTCAAGATCTCTaGGCTGACATACGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EMCKYECPSCFSARPPVSGVQDL*ADIRWA Trigger: TGCCCAGCGTATGTCAGCCCAGAGATCTTGAACACC...GGACACAGGTGGCCTGGCTGAGAAGCAAGACGGACATTCATATTTACACATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR TCA 90 bp | AGCACCCAGGTTTCAGGTCAGTCTGTGTGCACCGAATTATTATTATTTTTAGGTAGCCAAGGTTCGGGCTaGAACTCTGGCTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: STQVSGQSVCTELLLFLGSQGSG*NSGWAQ Trigger: CTGAGCCCAGCCAGAGTTTCAGCCCGAACCTTGGCT...ACCTAAAAATAATAATAATTCGGTGCACACAGACTGACCTGAAACCTGGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGTGTAAATATGAATGTCCGTCTTGCTTCTCAGCCAGGCCACCTGTGTCCCCAAACTCTCCAGCTTaGCACGAGTCCTCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EMCKYECPSCFSARPPVSPNSPA*HESSLH Trigger: ATGAAGAGAGGACTCGTGTCAAGCTGGAGAGTTTGG...GGACACAGGTGGCCTGGCTGAGAAGCAAGACGGACATTCATATTTACACATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR TCA 90 bp | AGTAACATTTACACACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTAGTTCTCCTCCATGTTaGCGTCTGGCACCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNIYTLESTCHLPKNRTISSPPC*RLAPAG Trigger: ACCAGCTGGTGCCAGACGTCAACATGGAGGAGAACT...AATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTGTGTAAATGTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTAAATATGAATGTCCGTCTTGCTTCTCAGCCAGGCCACCTGTGTCCCAGGTAGAAAACCAAGGATaGTCCAGAATTTCCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MCKYECPSCFSARPPVSQVENQG*SRISCE Trigger: CTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTAC...CTGGGACACAGGTGGCCTGGCTGAGAAGCAAGACGGACATTCATATTTACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CCA 90 bp | GAGATTAGGACAAAAACATTAAACCAAATACAGGACAAAGCACCAGAGGCCATTTTCGGGCTGAAACTCTaGCTGGGCTCAGCGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIRTKTLNQIQDKAPEAIFGLKL*LGSADL Trigger: AAGGTCCGCTGAGCCCAGCCAGAGTTTCAGCCCGAA...AATGGCCTCTGGTGCTTTGTCCTGTATTTGGTTTAATGTTTTTGTCCTAATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCCAGGTTTCAGGTCAGTCTGTGTGCACCGAATTATTATTATTTTTAGGTGAGTTTCTGGAATGTTaGACTGGCCCCTGCGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: STQVSGQSVCTELLLFLGEFLEC*TGPCGS Trigger: AGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTC...ACCTAAAAATAATAATAATTCGGTGCACACAGACTGACCTGAAACCTGGGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| 3UTR CAA 72 bp | GCTGTTTGTATGTATATCATCCTGGCTTTTGGCTTATaGCCCGTTTACTCTTTCTGTTCAAACCAGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVCMYIILAFGL*PVYSFCSNQRA Trigger: GGCCCTCTGGTTTGAACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCCAGGTTTCAGGTCAGTCTGTGTGCACCGAATTATTATTATTTTTAGGTAGCTCTTCGAAATCCTaGGTTTTGTTCCGCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: STQVSGQSVCTELLLFLGSSSKS*VLFRDL Trigger: GAGATCGCGGAACAAAACCCAGGATTTCGAAGAGCT...ACCTAAAAATAATAATAATTCGGTGCACACAGACTGACCTGAAACCTGGGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAATAGCTGCCCTGTATTTTATACACATGGGACAACCTGTCTCGTTTTATCTGGAATGTTGAACTaGCCCCTGCGGATCTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGNSCPVFYTHGTTCLVLSGMLN*PLRILL Trigger: CAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGA...TAAAACGAGACAGGTTGTCCCATGTGTATAAAATACAGGGCAGCTATTTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| 3UTR CAA 72 bp | GACAGAGAGCTGTTTGTATGTATATCATCCTGGCTTTaGGCTTATTGCCCGTTTACTCTTTCTGTTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: DRELFVCISSWL*AYCPFTLSVQT Trigger: GGTTTGAACAGAAAGAGTAAACGGGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAATAGCTGCCCTGTATTTTATACACATGGGACAACCTGTCTCGTTTTAGTAGAAAACCAAGGATaGTCCAGAATTTCCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGNSCPVFYTHGTTCLVLVENQG*SRISCE Trigger: CTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTAC...TAAAACGAGACAGGTTGTCCCATGTGTATAAAATACAGGGCAGCTATTTCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAAATAGCTGCCCTGTATTTTATACACATGGGACAACCTGTCTCGTTTTAGTAAGTATTTCCCGATaGAAGAAACGCAATGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: KGNSCPVFYTHGTTCLVLVSISR*KKRNAT Trigger: TGTCGCATTGCGTTTCTTGCATCGGGAAATACTTAC...TAAAACGAGACAGGTTGTCCCATGTGTATAAAATACAGGGCAGCTATTTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| 3UTR CAA 72 bp | CTTCTTCCCCTGAACTGTGATAATACATCTGGAAGTTaGACTTCTGATAGTTTCCTGCTACAAAAACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLNCDNTSGS*TSDSFLLQKPA Trigger: AGCTGGTTTTTGTAGCAGGAAACTATCAGAAGTCAAACTTCCAGATGTATTATCACAGTTCAGGGGAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| 3UTR CAA 72 bp | AATAAATACAAGGTGCGTATTGGGACAGAGAGCTGTTaGTATGTATATCATCCTGGCTTTTGGCTTATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKYKVRIGTESC*YVYHPGFWLIA Trigger: GGCAATAAGCCAAAAGCCAGGATGATATACATACAAACAGCTCTCTGTCCCAATACGCACCTTGTATTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS CCA 90 bp | GGAGTCTCGGGCGGGCTCGGAGAGCCAAGGTTCGGGCTGAAACTCTaGCTGGGCTCAGCGGACCTTATAGACGACAGCTCTTCGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GVSGGLGEPRFGLKL*LGSADLIDDSSSKS Trigger: GGATTTCGAAGAGCTGTCGTCTATAAGGTCCGCTGAGCCCAGCCAGAGTTTCAGCCCGAACCTTGGCTCTCCGAGCCCGCCCGAGACTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGAAGAGAAGCTTAGGGGAGGGGCTCCCGTCCATCTGAACCCAACCCCCGCTGGGCAGCCATGCTaGTCAGAGAGTGAGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PREEKLRGGAPVHLNPTPAGQPC*SESESS Trigger: TGATGACTCACTCTCTGACAAGCATGGCTGCCCAGC...GGGGGTTGGGTTCAGATGGACGGGAGCCCCTCCCCTAAGCTTCTCTTCCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGAAGAGAAGCTTAGGGGAGGGGCTCCCGTCCATCTGAACCCAACCCCCGTGATTTGGTTGATGTaGCTATGGGCAGACAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PREEKLRGGAPVHLNPTPVIWLM*LWADRQ Trigger: CTGCCTGTCTGCCCATAGCAACATCAACCAAATCAC...GGGGGTTGGGTTCAGATGGACGGGAGCCCCTCCCCTAAGCTTCTCTTCCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS TCA 90 bp | AGAAAACCAAGGATGGTCCAGAATTTCCTGCGAGGTCAGCCGCTCTaGCGGCTCCCGTCGCAGGATGCTTCGGATGAGGCACTTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKPRMVQNFLRGQPL*RLPSQDASDEALGL Trigger: AAGGCCAAGTGCCTCATCCGAAGCATCCTGCGACGGGAGCCGTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS GCA 90 bp | CTGATCTCAAACACCTTGCAAACCAGCTCCTCTCCGCTGTGCAGATaGACAGCGCGGAAAACGTGGTCTCCCTCCAGAGGCTCCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LISNTLQTSSSPLCR*TARKTWSPSRGSNS Trigger: ACTGTTGGAGCCTCTGGAGGGAGACCACGTTTTCCGCGCTGTGCATCTGCACAGCGGAGAGGAGCTGGTTTGCAAGGTGTTTGAGATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGGGCTCTCTCTTGCTCCTGGTACCTGCTATGTGTCCCTGGGCCTTGAGCTTCGGATGAGGCACTaGGCCTTGGGAGACAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLGLSLAPGTCYVSLGLELRMRH*ALGDRV Trigger: AACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGAAG...CTCAAGGCCCAGGGACACATAGCAGGTACCAGGAGCAAGAGAGAGCCCCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS GCA 90 bp | TCCAGAGGCTCCAACAGTAAGTATTTCCCGATGCAAGAAACGCAATaGGACAAGTTCGGAGTCTCGGGCGGGCTCGGAGAGCCAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRGSNSKYFPMQETQ*DKFGVSGGLGEPRF Trigger: GAACCTTGGCTCTCCGAGCCCGCCCGAGACTCCGAACTTGTCGCATTGCGTTTCTTGCATCGGGAAATACTTACTGTTGGAGCCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
||
| CDS GCA 90 bp | AAACGTGGTCTCCCTCCAGAGGCTCCAACAGTAAGTATTTCCCGATaGAAGAAACGCAATGCGACAAGTTCGGAGTCTCGGGCGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KRGLPPEAPTVSISR*KKRNATSSESRAGS Trigger: CGAGCCCGCCCGAGACTCCGAACTTGTCGCATTGCGTTTCTTGCATCGGGAAATACTTACTGTTGGAGCCTCTGGAGGGAGACCACGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
||
| CDS CCA 90 bp | CAAACCAGCTCCTCTCCGCTGTGCAGATGCACAGCGCGGAAAACGTaGTCTCCCTCCAGAGGCTCCAACAGTAAGTATTTCCCGATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QTSSSPLCRCTARKT*SPSRGSNSKYFPMQ Trigger: TTGCATCGGGAAATACTTACTGTTGGAGCCTCTGGAGGGAGACCACGTTTTCCGCGCTGTGCATCTGCACAGCGGAGAGGAGCTGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGGGCTCTCTCTTGCTCCTGGTACCTGCTATGTGTCCCTGGGCCTTGAGCTGATCTCAAACACCTaGCAAACCAGCTCCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLGLSLAPGTCYVSLGLELISNT*QTSSSP Trigger: CGGAGAGGAGCTGGTTTGCAAGGTGTTTGAGATCAG...CTCAAGGCCCAGGGACACATAGCAGGTACCAGGAGCAAGAGAGAGCCCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTCAGCTGGGCAGCCATGCTaGTCAGAGAGTGAGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SEPNPHPTRLVPMLRVPSAGQPC*SESESS Trigger: TGATGACTCACTCTCTGACAAGCATGGCTGCCCAGC...TGACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTAAGTTCTCCTCCATGTaGACGTCTGGCACCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLNPTPIPHVLFPCYVFRKFSSM*TSGTSW Trigger: CCAGCTGGTGCCAGACGTCAACATGGAGGAGAACTT...ACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS GCA 90 bp | GAGACACTAAAATCTGTAGAAAACCAAGGATGGTCCAGAATTTCCTaGGAGGTCAGCCGCTCTGACGGCTCCCGTCGCAGGATGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ETLKSVENQGWSRIS*EVSRSDGSRRRMLR Trigger: CCGAAGCATCCTGCGACGGGAGCCGTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CAA 90 bp | AGATCAGCATCATCAAAAAGATCTGACTCCAGGAGGCGCCTGCCCTCTGGGAGCATGAGGCACTTGGCCTaGGGAGACAGAGTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSASSKRSDSRRRLPSGSMRHLA*GDRVSG Trigger: TCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCAT...GCTCCCAGAGGGCAGGCGCCTCCTGGAGTCAGATCTTTTTGATGATGCTGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
||
| CDS CCA 90 bp | TGGCTGGGCTCAGCGGACCTTATAGACGACAGCTCTTCGAAATCCTaGGTTTTGTTCCGCGATCTCCCATATCTCGCTATTGTGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WLGSADLIDDSSSKS*VLFRDLPYLAIVIG Trigger: CCCTATCACAATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGAAGAGCTGTCGTCTATAAGGTCCGCTGAGCCCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
||
| CDS CCA 90 bp | CAGGATGCTTCGGATGAGGCACTTGGCCTTGGGAGACAGAGTTTCTaGAATGTTGAACTGGCCCCTGCGGATCTTACTGAAAAGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: QDASDEALGLGRQSF*NVELAPADLTEKRT Trigger: AGTTCTCTTTTCAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGAAGCATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGAACCCAACCCCCATCCCACACGTCTTGTTCCCATGCTACGTGTTCCGTGTCCTCTCTTCATCCTaGAAGATAAATTTCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLNPTPIPHVLFPCYVFRVLSSS*KINFRS Trigger: GCTGCGGAAATTTATCTTCAAGGATGAAGAGAGGAC...ACGGAACACGTAGCATGGGAACAAGACGTGTGGGATGGGGGTTGGGTTCAGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CAA 90 bp | GAAATGTGTAAATATGAATGTCCGTCTTGCTTCTCAGCCAGGCCACCTGTGTCCAAGTTCTCCTCCATGTaGACGTCTGGCACCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EMCKYECPSCFSARPPVSKFSSM*TSGTSW Trigger: CCAGCTGGTGCCAGACGTCAACATGGAGGAGAACTT...GGACACAGGTGGCCTGGCTGAGAAGCAAGACGGACATTCATATTTACACATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS CCA 90 bp | CCAAATCCCGAATTTGAGACACTAAAATCTGTAGAAAACCAAGGATaGTCCAGAATTTCCTGCGAGGTCAGCCGCTCTGACGGCTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PNPEFETLKSVENQG*SRISCEVSRSDGSR Trigger: ACGGGAGCCGTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGTGTCTCAAATTCGGGATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS CCA 90 bp | AAGAAAGGGTCCAAGTTCTCCTCCATGTTGACGTCTGGCACCAGCTaGTCACACGCCTCTTTAGCACCAAATCCCGAATTTGAGACACTA | + |
|
Preference number: 5 (lower is better) Translates to: KKGSKFSSMLTSGTS*SHASLAPNPEFETL Trigger: TAGTGTCTCAAATTCGGGATTTGGTGCTAAAGAGGCGTGTGACCAGCTGGTGCCAGACGTCAACATGGAGGAGAACTTGGACCCTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGCGTGAAGCATCCAAGAGTCCGCACACACATGCCACATACTAGAGTGAAGTCGAAATCCTGGGTTTaGTTCCGCGATCTCCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: VGVKHPRVRTHMPHTRVKSKSWV*FRDLPY Trigger: ATATGGGAGATCGCGGAACAAAACCCAGGATTTCGA...CTTCACTCTAGTATGTGGCATGTGTGTGCGGACTCTTGGATGCTTCACGCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR CAA 90 bp | GAAATGTGTAAATATGAATGTCCGTCTTGCTTCTCAGCCAGGCCACCTGTGTCCATGAGGCACTTGGCCTaGGGAGACAGAGTTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: EMCKYECPSCFSARPPVSMRHLA*GDRVSG Trigger: TCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCAT...GGACACAGGTGGCCTGGCTGAGAAGCAAGACGGACATTCATATTTACACATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CCA 90 bp | ATGAGGCACTTGGCCTTGGGAGACAGAGTTTCTGGAATGTTGAACTaGCCCCTGCGGATCTTACTGAAAAGAGAACTAGGCTCAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: MRHLALGDRVSGMLN*PLRILLKRELGSMS Trigger: TGACATTGAGCCTAGTTCTCTTTTCAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS TCA 90 bp | TGGCACCAGCTGGTCACACGCCTCTTTAGCACCAAATCCCGAATTTaGGACACTAAAATCTGTAGAAAACCAAGGATGGTCCAGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: WHQLVTRLFSTKSRI*DTKICRKPRMVQNF Trigger: GAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGTGTCTCAAATTCGGGATTTGGTGCTAAAGAGGCGTGTGACCAGCTGGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS-3UTR CAA 90 bp | AGCACCCAGGTTTCAGGTCAGTCTGTGTGCACCGAATTATTATTATTTTTAGGTATAAATTTCCGCAGCTaGAGGTCACGCAGCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: STQVSGQSVCTELLLFLGINFRS*RSRSTR Trigger: CCTGGTGCTGCGTGACCTCAAGCTGCGGAAATTTAT...ACCTAAAAATAATAATAATTCGGTGCACACAGACTGACCTGAAACCTGGGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR CAA 90 bp | ACAGATGCAGGCAGGAAAACCCAAACGACTGAGGTACTGGGAACACAAATATTTATTTCCGTGATTTGGTaGATGTTGCTATGGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: TDAGRKTQTTEVLGTQIFISVIW*MLLWAD Trigger: GTCTGCCCATAGCAACATCAACCAAATCACGGAAAT...AAATATTTGTGTTCCCAGTACCTCAGTCGTTTGGGTTTTCCTGCCTGCATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS-3UTR CAA 90 bp | ACAGATGCAGGCAGGAAAACCCAAACGACTGAGGTACTGGGAACACAAATATTTGTCCTCTCTTCATCCTaGAAGATAAATTTCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TDAGRKTQTTEVLGTQIFVLSSS*KINFRS Trigger: GCTGCGGAAATTTATCTTCAAGGATGAAGAGAGGAC...AAATATTTGTGTTCCCAGTACCTCAGTCGTTTGGGTTTTCCTGCCTGCATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS CCA 72 bp | GGCGGGCTCGGAGAGCCAAGGTTCGGGCTGAAACTCTaGCTGGGCTCAGCGGACCTTATAGACGACAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGLGEPRFGLKL*LGSADLIDDSS Trigger: AGAGCTGTCGTCTATAAGGTCCGCTGAGCCCAGCCAGAGTTTCAGCCCGAACCTTGGCTCTCCGAGCCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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| CDS TCA 72 bp | GCCGCTCTGACGGCTCCCGTCGCAGGATGCTTCGGATaGGGCACTTGGCCTTGGGAGACAGAGTTTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: AALTAPVAGCFG*GTWPWETEFLE Trigger: TTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGAAGCATCCTGCGACGGGAGCCGTCAGAGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS TCA 72 bp | AGGATGGTCCAGAATTTCCTGCGAGGTCAGCCGCTCTaGCGGCTCCCGTCGCAGGATGCTTCGGATGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RMVQNFLRGQPL*RLPSQDASDEA Trigger: TGCCTCATCCGAAGCATCCTGCGACGGGAGCCGTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CAA 90 bp | AGCCGCTCTGACGGCTCCCGTCGCAGGATGCTTCGGATGAGGCACTaGGCCTTGGGAGACAGAGTTTCTGGAATGTTGAACTGGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SRSDGSRRRMLRMRH*ALGDRVSGMLNWPL Trigger: CAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGAAGCATCCTGCGACGGGAGCCGTCAGAGCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS GCA 72 bp | AACACCTTGCAAACCAGCTCCTCTCCGCTGTGCAGATaGACAGCGCGGAAAACGTGGTCTCCCTCCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: NTLQTSSSPLCR*TARKTWSPSRG Trigger: GCCTCTGGAGGGAGACCACGTTTTCCGCGCTGTGCATCTGCACAGCGGAGAGGAGCTGGTTTGCAAGGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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| CDS CAA 90 bp | TCTGACGGCTCCCGTCGCAGGATGCTTCGGATGAGGCACTTGGCCTaGGGAGACAGAGTTTCTGGAATGTTGAACTGGCCCCTGCGGATC | + |
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Preference number: 6 (lower is better) Translates to: SDGSRRRMLRMRHLA*GDRVSGMLNWPLRI Trigger: GATCCGCAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGAAGCATCCTGCGACGGGAGCCGTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS GCA 72 bp | ATCTCAAACACCTTGCAAACCAGCTCCTCTCCGCTGTaGAGATGCACAGCGCGGAAAACGTGGTCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ISNTLQTSSSPL*RCTARKTWSPS Trigger: GGAGGGAGACCACGTTTTCCGCGCTGTGCATCTGCACAGCGGAGAGGAGCTGGTTTGCAAGGTGTTTGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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| CDS CAA 72 bp | TCCCGTCGCAGGATGCTTCGGATGAGGCACTTGGCCTaGGGAGACAGAGTTTCTGGAATGTTGAACTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRRRMLRMRHLA*GDRVSGMLNWP Trigger: GGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGAAGCATCCTGCGACGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS GCA 72 bp | AAATCTGTAGAAAACCAAGGATGGTCCAGAATTTCCTaGGAGGTCAGCCGCTCTGACGGCTCCCGTCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KSVENQGWSRIS*EVSRSDGSRRR Trigger: CCTGCGACGGGAGCCGTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CCA 72 bp | TCCTCTCCGCTGTGCAGATGCACAGCGCGGAAAACGTaGTCTCCCTCCAGAGGCTCCAACAGTAAGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: SSPLCRCTARKT*SPSRGSNSKYF Trigger: GAAATACTTACTGTTGGAGCCTCTGGAGGGAGACCACGTTTTCCGCGCTGTGCATCTGCACAGCGGAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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| CDS GCA 72 bp | TCCAACAGTAAGTATTTCCCGATGCAAGAAACGCAATaGGACAAGTTCGGAGTCTCGGGCGGGCTCGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SNSKYFPMQETQ*DKFGVSGGLGE Trigger: CTCTCCGAGCCCGCCCGAGACTCCGAACTTGTCGCATTGCGTTTCTTGCATCGGGAAATACTTACTGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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| CDS CAA 72 bp | GCTTTGGTCTCTCCCAGGAGGATTTCCGTGATTTGGTaGATGTTGCTATGGGCAGACAGGCAGAAGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALVSPRRISVIW*MLLWADRQKQG Trigger: CCCCTGCTTCTGCCTGTCTGCCCATAGCAACATCAACCAAATCACGGAAATCCTCCTGGGAGAGACCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS CAA 90 bp | TTGACACGAGTCCTCTCTTCATCCTTGAAGATAAATTTCCGCAGCTaGAGGTCACGCAGCACCAGGCCTCCATCGTGGCAATGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: LTRVLSSSLKINFRS*RSRSTRPPSWQWAT Trigger: TGTGGCCCATTGCCACGATGGAGGCCTGGTGCTGCGTGACCTCAAGCTGCGGAAATTTATCTTCAAGGATGAAGAGAGGACTCGTGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS GCA 72 bp | CTCCCTCCAGAGGCTCCAACAGTAAGTATTTCCCGATaGAAGAAACGCAATGCGACAAGTTCGGAGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LPPEAPTVSISR*KKRNATSSESR Trigger: CCGAGACTCCGAACTTGTCGCATTGCGTTTCTTGCATCGGGAAATACTTACTGTTGGAGCCTCTGGAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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| CDS CCA 72 bp | TCGGATGAGGCACTTGGCCTTGGGAGACAGAGTTTCTaGAATGTTGAACTGGCCCCTGCGGATCTTACTGAA | + |
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Preference number: 6 (lower is better) Translates to: SDEALGLGRQSF*NVELAPADLTE Trigger: TTCAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CAA 90 bp | AAAGAACACATAGGCTTTGGTCTCTCCCAGGAGGATTTCCGTGATTaGGTTGATGTTGCTATGGGCAGACAGGCAGAAGCAGGGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: KEHIGFGLSQEDFRD*VDVAMGRQAEAGGQ Trigger: CTGGCCCCCTGCTTCTGCCTGTCTGCCCATAGCAACATCAACCAAATCACGGAAATCCTCCTGGGAGAGACCAAAGCCTATGTGTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS CAA 90 bp | GGCTCAGCGGACCTTATAGACGACAGCTCTTCGAAATCCTGGGTTTaGTTCCGCGATCTCCCATATCTCGCTATTGTGATAGGGGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: GSADLIDDSSSKSWV*FRDLPYLAIVIGVD Trigger: GTCTACCCCTATCACAATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGAAGAGCTGTCGTCTATAAGGTCCGCTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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| CDS CAA 90 bp | CTTCGGATGAGGCACTTGGCCTTGGGAGACAGAGTTTCTGGAATGTaGAACTGGCCCCTGCGGATCTTACTGAAAAGAGAACTAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LRMRHLALGDRVSGM*NWPLRILLKRELGS Trigger: TGAGCCTAGTTCTCTTTTCAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CCA 72 bp | TCCAAGTTCTCCTCCATGTTGACGTCTGGCACCAGCTaGTCACACGCCTCTTTAGCACCAAATCCCGAATTT | + |
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Preference number: 6 (lower is better) Translates to: SKFSSMLTSGTS*SHASLAPNPEF Trigger: AAATTCGGGATTTGGTGCTAAAGAGGCGTGTGACCAGCTGGTGCCAGACGTCAACATGGAGGAGAACTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CCA 72 bp | AAAGAAAGGGTCCAAGTTCTCCTCCATGTTGACGTCTaGCACCAGCTGGTCACACGCCTCTTTAGCACCAAA | + |
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Preference number: 6 (lower is better) Translates to: KERVQVLLHVDV*HQLVTRLFSTK Trigger: TTTGGTGCTAAAGAGGCGTGTGACCAGCTGGTGCCAGACGTCAACATGGAGGAGAACTTGGACCCTTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CCA 72 bp | TTGGCCTTGGGAGACAGAGTTTCTGGAATGTTGAACTaGCCCCTGCGGATCTTACTGAAAAGAGAACTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LALGDRVSGMLN*PLRILLKRELG Trigger: GCCTAGTTCTCTTTTCAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CAA 72 bp | ATAGGCTTTGGTCTCTCCCAGGAGGATTTCCGTGATTaGGTTGATGTTGCTATGGGCAGACAGGCAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: IGFGLSQEDFRD*VDVAMGRQAEA Trigger: TGCTTCTGCCTGTCTGCCCATAGCAACATCAACCAAATCACGGAAATCCTCCTGGGAGAGACCAAAGCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020922.8 |
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| CDS CAA 72 bp | AGGCACTTGGCCTTGGGAGACAGAGTTTCTGGAATGTaGAACTGGCCCCTGCGGATCTTACTGAAAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: RHLALGDRVSGM*NWPLRILLKRE Trigger: TTCTCTTTTCAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CCA 72 bp | TCAGCGGACCTTATAGACGACAGCTCTTCGAAATCCTaGGTTTTGTTCCGCGATCTCCCATATCTCGCTATT | + |
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Preference number: 6 (lower is better) Translates to: SADLIDDSSSKS*VLFRDLPYLAI Trigger: AATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGAAGAGCTGTCGTCTATAAGGTCCGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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| CDS CAA 72 bp | AAACTCTCCAGCTTGACACGAGTCCTCTCTTCATCCTaGAAGATAAATTTCCGCAGCTTGAGGTCACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: KLSSLTRVLSSS*KINFRSLRSRS Trigger: GCTGCGTGACCTCAAGCTGCGGAAATTTATCTTCAAGGATGAAGAGAGGACTCGTGTCAAGCTGGAGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CCA 72 bp | GAATTTGAGACACTAAAATCTGTAGAAAACCAAGGATaGTCCAGAATTTCCTGCGAGGTCAGCCGCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: EFETLKSVENQG*SRISCEVSRSD Trigger: GTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGTGTCTCAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221518.2 |
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| CDS CAA 72 bp | GACCTTATAGACGACAGCTCTTCGAAATCCTGGGTTTaGTTCCGCGATCTCCCATATCTCGCTATTGTGATA | + |
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Preference number: 6 (lower is better) Translates to: DLIDDSSSKSWV*FRDLPYLAIVI Trigger: TATCACAATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGAAGAGCTGTCGTCTATAAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020922.8 ENSMUST00000221215.2 |
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