Pregenerated sensors for TRIB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032501Ensembl transcript IDs: ENSMUST00000067543.8, ENSMUST00000118228.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGAAGCACGAAGACGGTTCACACGTGCTCCTGAGAGAGCAGGCTaGCGAGTCTCCTCACCCTTGTCTGCACACACAAAATGTTCCACC | + |
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Preference number: 1 (lower is better) Translates to: AEARRRFTRAPERAG*RVSSPLSAHTKCST Trigger: GGTGGAACATTTTGTGTGTGCAGACAAGGGTGAGGAGACTCGCCAGCCTGCTCTCTCAGGAGCACGTGTGAACCGTCTTCGTGCTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR GCA 90 bp | AACCCTGCACCTGTGCTGGCTACAGGAATAACGTCAGCCTGCCATTaGTTAACCCTCGGGTTACCAAACCCTATGCCCATGACACTGGCC | + |
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Preference number: 1 (lower is better) Translates to: NPAPVLATGITSACH*LTLGLPNPMPMTLA Trigger: GGCCAGTGTCATGGGCATAGGGTTTGGTAACCCGAGGGTTAAGCAATGGCAGGCTGACGTTATTCCTGTAGCCAGCACAGGTGCAGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR CCA 90 bp | ACTGGGAGGGGTGGGGTGCGCCCAGGCTCAAACAGAACGGGAGTTTaGTGTGATAGGGATGGTTGTTATTCTGCCAACACAACAACACAA | + |
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Preference number: 1 (lower is better) Translates to: TGRGGVRPGSNRTGV*CDRDGCYSANTTTQ Trigger: TTGTGTTGTTGTGTTGGCAGAATAACAACCATCCCTATCACACCAAACTCCCGTTCTGTTTGAGCCTGGGCGCACCCCACCCCTCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR GCA 90 bp | ATGGTGCTCCGTCCCCAAATCTGGCCGGCACCATGGAAGAGGGCCTaGCTGTCATTAGAAATGCCATGTGTGAGAATTATGAGGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: MVLRPQIWPAPWKRA*LSLEMPCVRIMRFL Trigger: CAGAAACCTCATAATTCTCACACATGGCATTTCTAATGACAGGCAGGCCCTCTTCCATGGTGCCGGCCAGATTTGGGGACGGAGCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR GCA 90 bp | TACAGACAGGCAATCTCTATCTTCCCACCACGGACGGAGTCTGGCTaGAGAATGAAGTGTGGTATAGCTCAAGCTGCTTCCTGGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: YRQAISIFPPRTESG*RMKCGIAQAASWVL Trigger: GAGAACCCAGGAAGCAGCTTGAGCTATACCACACTTCATTCTGCAGCCAGACTCCGTCCGTGGTGGGAAGATAGAGATTGCCTGTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR GCA 90 bp | TCATTGAAAAGGGGACACCTCTGTCGAGCAGCTAATCTGAGTGCATaGTGGTCAAATCAAGTCACTCAGCCCAGAGAGGCGACACCACAT | + |
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Preference number: 1 (lower is better) Translates to: SLKRGHLCRAANLSA*WSNQVTQPREATPH Trigger: ATGTGGTGTCGCCTCTCTGGGCTGAGTGACTTGATTTGACCAGCATGCACTCAGATTAGCTGCTCGACAGAGGTGTCCCCTTTTCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR CCA 90 bp | CCAGATGCAGGACTTAGTACTAACAGCAGAGAAGACCTGAGCCCTTaGGTTTATCTTGCACCTAAAGGCATGACCTGTGCCTTTGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: PDAGLSTNSREDLSP*VYLAPKGMTCAFGG Trigger: ACCCCCAAAGGCACAGGTCATGCCTTTAGGTGCAAGATAAACCCAAGGGCTCAGGTCTTCTCTGCTGTTAGTACTAAGTCCTGCATCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR CCA 90 bp | ATTCTACAGACAGGCAATCTCTATCTTCCCACCACGGACGGAGTCTaGCTGCAGAATGAAGTGTGGTATAGCTCAAGCTGCTTCCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: ILQTGNLYLPTTDGV*LQNEVWYSSSCFLG Trigger: ACCCAGGAAGCAGCTTGAGCTATACCACACTTCATTCTGCAGCCAGACTCCGTCCGTGGTGGGAAGATAGAGATTGCCTGTCTGTAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR TCA 90 bp | AAACCCGTGGGAAGTTGGCATCCGGTTTCCTTTTGGAAATTAGTCTaGGAATCTTGCAAGACTGCCTCAAACTCGCTTTCGCTGAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: KPVGSWHPVSFWKLV*ESCKTASNSLSLKH Trigger: GTGCTTCAGCGAAAGCGAGTTTGAGGCAGTCTTGCAAGATTCTCAGACTAATTTCCAAAAGGAAACCGGATGCCAACTTCCCACGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR TCA 90 bp | CAAGGGATCTCGGGTAGGCAGCTAGGAGCGAGACTCTGCATTGGATaGGTTTTAAAGTCCTTTCCAGCTACATTTTTGAGGTTCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: QGISGRQLGARLCIG*VLKSFPATFLRFSL Trigger: CAGAGAGAACCTCAAAAATGTAGCTGGAAAGGACTTTAAAACTCATCCAATGCAGAGTCTCGCTCCTAGCTGCCTACCCGAGATCCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR GCA 90 bp | GCATCCGGTTTCCTTTTGGAAATTAGTCTGAGAATCTTGCAAGACTaGCTCAAACTCGCTTTCGCTGAAGCACGAAGACGGTTCACACGT | + |
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Preference number: 1 (lower is better) Translates to: ASGFLLEISLRILQD*LKLAFAEARRRFTR Trigger: ACGTGTGAACCGTCTTCGTGCTTCAGCGAAAGCGAGTTTGAGGCAGTCTTGCAAGATTCTCAGACTAATTTCCAAAAGGAAACCGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR GCA 90 bp | GCAAGGGGGAGTTTGTTACTCCAACCGATTGCCACCTTGTTCAAATaGCATTGTGCGAAGTGCTTCCTTCCCATTCAAATGTTCAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: ARGSLLLQPIATLFK*HCAKCFLPIQMFKF Trigger: GAACTTGAACATTTGAATGGGAAGGAAGCACTTCGCACAATGGCATTTGAACAAGGTGGCAATCGGTTGGAGTAACAAACTCCCCCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR GCA 90 bp | TTACTCCAACCGATTGCCACCTTGTTCAAATGCCATTGTGCGAAGTaGTTCCTTCCCATTCAAATGTTCAAGTTCACTACTACACCTGAC | + |
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Preference number: 1 (lower is better) Translates to: LLQPIATLFKCHCAK*FLPIQMFKFTTTPD Trigger: GTCAGGTGTAGTAGTGAACTTGAACATTTGAATGGGAAGGAAGCACTTCGCACAATGGCATTTGAACAAGGTGGCAATCGGTTGGAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR GCA 90 bp | AAAGGGTATCTCACTGTAGCCAGGGACAGTCACAGGAAGGCAGCGTaGACACAAAGGAAACTCACTGTATTTCTTTACGAAACCATATTT | + |
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Preference number: 1 (lower is better) Translates to: KGYLTVARDSHRKAA*TQRKLTVFLYETIF Trigger: AAATATGGTTTCGTAAAGAAATACAGTGAGTTTCCTTTGTGTGCACGCTGCCTTCCTGTGACTGTCCCTGGCTACAGTGAGATACCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR GCA 90 bp | GAGTTTGTTACTCCAACCGATTGCCACCTTGTTCAAATGCCATTGTaGGAAGTGCTTCCTTCCCATTCAAATGTTCAAGTTCACTACTAC | + |
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Preference number: 1 (lower is better) Translates to: EFVTPTDCHLVQMPL*EVLPSHSNVQVHYY Trigger: GTAGTAGTGAACTTGAACATTTGAATGGGAAGGAAGCACTTCGCACAATGGCATTTGAACAAGGTGGCAATCGGTTGGAGTAACAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR GCA 90 bp | CTCTCCATGTTAGTAGTCTCCCTAGGCATAGCCCTTAAAGATGCCTaGCGGCTTTTGTTGTGTCATTTCTCACAATACAGTATTTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: LSMLVVSLGIALKDA*RLLLCHFSQYSISV Trigger: AACAGAAATACTGTATTGTGAGAAATGACACAACAAAAGCCGGCAGGCATCTTTAAGGGCTATGCCTAGGGAGACTACTAACATGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR CAA 90 bp | CTCCAGAAGCATTTAGGCAGAGGCCAGGTCCCCCACCTGGGGAGGTaGAAGCAAGGGATCTCGGGTAGGCAGCTAGGAGCGAGACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LQKHLGRGQVPHLGR*KQGISGRQLGARLC Trigger: GCAGAGTCTCGCTCCTAGCTGCCTACCCGAGATCCCTTGCTTCAACCTCCCCAGGTGGGGGACCTGGCCTCTGCCTAAATGCTTCTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTGAAGACCCTGGATGCCAGAGGCACAGTAAACCCGTGGGAAGTTGGCATCGAGGCGACACCACATTaGGCCCCACAGGGACAATGG | + |
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Preference number: 2 (lower is better) Translates to: KLKTLDARGTVNPWEVGIEATPH*APQGQW Trigger: CCATTGTCCCTGTGGGGCTCAATGTGGTGTCGCCTC...GATGCCAACTTCCCACGGGTTTACTGTGCCTCTGGCATCCAGGGTCTTCAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGGGAACCAACTACTGGGAGGGGTGGGGTGCGCCCAGGCTCAAACAGAACGGAGTCCACTTGTCCTTaGCAAGTGGACACCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: EWEPTTGRGGVRPGSNRTESTCP*QVDTFS Trigger: GGAAAAGGTGTCCACTTGTCAAGGACAAGTGGACTC...CGTTCTGTTTGAGCCTGGGCGCACCCCACCCCTCCCAGTAGTTGGTTCCCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGTTCGGGCAGGCTGTAGGGTTTCTCACTCCATCTGTTCCAACGCAGAAGCCCCACAGGGACAATaGTGCTCCGTCCCCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: VWVRAGCRVSHSICSNAEAPQGQ*CSVPKS Trigger: AGATTTGGGGACGGAGCACCATTGTCCCTGTGGGGC...TTCTGCGTTGGAACAGATGGAGTGAGAAACCCTACAGCCTGCCCGAACCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR CCA 90 bp | TGCACACACAAAATGTTCCACCCAGAGATGGTCCTAATGGTGGGCGTAGGGAGTCTTTGGGGGAGAGTCTaGGTTCGGGCAGGCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: CTHKMFHPEMVLMVGVGSLWGRV*VRAGCR Trigger: CCTACAGCCTGCCCGAACCCAGACTCTCCCCCAAAG...ACTCCCTACGCCCACCATTAGGACCATCTCTGGGTGGAACATTTTGTGTGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTGAAGACCCTGGATGCCAGAGGCACAGTAAACCCGTGGGAAGTTGGCATCAGGAGGTCTTGGCTTTaGGGGAGAGTCTGGGTTCGG | + |
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Preference number: 2 (lower is better) Translates to: KLKTLDARGTVNPWEVGIRRSWL*GRVWVR Trigger: CCGAACCCAGACTCTCCCCCAAAGCCAAGACCTCCT...GATGCCAACTTCCCACGGGTTTACTGTGCCTCTGGCATCCAGGGTCTTCAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTGGCCTGTGCAATGCAGATTTCAAAAGCCGGTGAGGAGGTGTGTAGTGCAAACTACTGGGAGGGGTaGGGTGCGCCCAGGCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: TLACAMQISKAGEEVCSANYWEG*GAPRLK Trigger: TTTGAGCCTGGGCGCACCCCACCCCTCCCAGTAGTT...TGCACTACACACCTCCTCACCGGCTTTTGAAATCTGCATTGCACAGGCCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR CAA 90 bp | AAACCCTGCACCTGTGCTGGCTACAGGAATAACGTCAGCCTGCCATaGCTTAACCCTCGGGTTACCAAACCCTATGCCCATGACACTGGC | + |
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Preference number: 2 (lower is better) Translates to: KPCTCAGYRNNVSLP*LNPRVTKPYAHDTG Trigger: GCCAGTGTCATGGGCATAGGGTTTGGTAACCCGAGGGTTAAGCAATGGCAGGCTGACGTTATTCCTGTAGCCAGCACAGGTGCAGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCCCATGACACTGGCCTGTGCAATGCAGATTTCAAAAGCCGGTGAGGAGGTGGCTCAAGCTGCTTCCTaGGTTCTCTTGGTGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: MPMTLACAMQISKAGEEVAQAAS*VLLVQP Trigger: AGGCTGCACCAAGAGAACCCAGGAAGCAGCTTGAGC...CACCTCCTCACCGGCTTTTGAAATCTGCATTGCACAGGCCAGTGTCATGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGACAGACACAGACGACAAAACAAGCTGCAGAGCCAAATGACAACAATCGGACCCACCTGGGGAGGTTaGAGCAAGGGATCTCGGGTA | + |
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Preference number: 2 (lower is better) Translates to: SDRHRRQNKLQSQMTTIGPTWGG*SKGSRV Trigger: TACCCGAGATCCCTTGCTTCAACCTCCCCAGGTGGG...TCCGATTGTTGTCATTTGGCTCTGCAGCTTGTTTTGTCGTCTGTGTCTGTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGGTACAGCAGAGGCAGGGCACGGAAGTAAGAATTTGAGCACCTCTTGGAGTTTGCACCTAAAGGCATaGCCTGTGCCTTTGGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: LGTAEAGHGSKNLSTSWSLHLKA*PVPLGV Trigger: AACCCCCAAAGGCACAGGTCATGCCTTTAGGTGCAA...ACTCCAAGAGGTGCTCAAATTCTTACTTCCGTGCCCTGCCTCTGCTGTACCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCTGGCGAGTCTCCTCACCCTTGTCTGCACACACAAAATGTTCCACCCAGTGCCATTGTGCGAAGTaGTTCCTTCCCATTCAAATG | + |
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Preference number: 2 (lower is better) Translates to: AGWRVSSPLSAHTKCSTQCHCAK*FLPIQM Trigger: CATTTGAATGGGAAGGAAGCACTTCGCACAATGGCA...CTGGGTGGAACATTTTGTGTGTGCAGACAAGGGTGAGGAGACTCGCCAGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTTCCACAGTATCAGAAAGCCAAGGCAGGGGTGAACCATCCAAGCCTGTCGCCACCTTGTTCAAATaGCATTGTGCGAAGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SASTVSESQGRGEPSKPVATLFK*HCAKCF Trigger: GAAGCACTTCGCACAATGGCATTTGAACAAGGTGGC...GACAGGCTTGGATGGTTCACCCCTGCCTTGGCTTTCTGATACTGTGGAAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR CAA 90 bp | CACCGGCCAGGAACCGGACACTTCTTCACGGCAAACAGTTTCTCTTaGCTAATCCTGTGTGTTTCGATGGTCAGTGCAAGGTCAGATACA | + |
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Preference number: 2 (lower is better) Translates to: HRPGTGHFFTANSFS*LILCVSMVSARSDT Trigger: TGTATCTGACCTTGCACTGACCATCGAAACACACAGGATTAGCAAAGAGAAACTGTTTGCCGTGAAGAAGTGTCCGGTTCCTGGCCGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR GCA 90 bp | AAACTGAAGACCCTGGATGCCAGAGGCACAGTAAACCCGTGGGAAGTTGGCATCGTTCAAATGCCATTGTaGGAAGTGCTTCCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: KLKTLDARGTVNPWEVGIVQMPL*EVLPSH Trigger: ATGGGAAGGAAGCACTTCGCACAATGGCATTTGAAC...GATGCCAACTTCCCACGGGTTTACTGTGCCTCTGGCATCCAGGGTCTTCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR CAA 90 bp | GGGAAGTTGGCATCCGGTTTCCTTTTGGAAATTAGTCTGAGAATCTaGCAAGACTGCCTCAAACTCGCTTTCGCTGAAGCACGAAGACGG | + |
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Preference number: 2 (lower is better) Translates to: GKLASGFLLEISLRI*QDCLKLAFAEARRR Trigger: CCGTCTTCGTGCTTCAGCGAAAGCGAGTTTGAGGCAGTCTTGCAAGATTCTCAGACTAATTTCCAAAAGGAAACCGGATGCCAACTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAACACACCTCTAGGCTTCCCTATGCTGCGTCCAATAGAGCAGAGAATAAACACAGCAGAGAAGACCTaGGCCCTTGGGTTTATCTTG | + |
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Preference number: 2 (lower is better) Translates to: TNTPLGFPMLRPIEQRINTAEKT*ALGFIL Trigger: CAAGATAAACCCAAGGGCTCAGGTCTTCTCTGCTGT...GTTTATTCTCTGCTCTATTGGACGCAGCATAGGGAAGCCTAGAGGTGTGTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTCACCCTTGTCTGCACACACAAAATGTTCCACCCAGAGATGGTCCTAATAACGCAGAACAGTCATaGTTGAGTCTGCAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SPHPCLHTQNVPPRDGPNNAEQS*LSLQGE Trigger: CTCTCCCTGCAGACTCAACCATGACTGTTCTGCGTT...ATTAGGACCATCTCTGGGTGGAACATTTTGTGTGTGCAGACAAGGGTGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGTACAGCAGAGGCAGGGCACGGAAGTAAGAATTTGAGCACCTCTTGGAGTGAAGACCTGAGCCCTTaGGTTTATCTTGCACCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LGTAEAGHGSKNLSTSWSEDLSP*VYLAPK Trigger: TTTAGGTGCAAGATAAACCCAAGGGCTCAGGTCTTC...ACTCCAAGAGGTGCTCAAATTCTTACTTCCGTGCCCTGCCTCTGCTGTACCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR CAA 90 bp | GTCCAGAAACCAAGTCTACTAAAGAAACCACACTCCACAAGACCTTaGGTCGAAGGAACTCTTATAAAGCTGCAGGTGCCTCCTGACGCA | + |
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Preference number: 2 (lower is better) Translates to: VQKPSLLKKPHSTRP*VEGTLIKLQVPPDA Trigger: TGCGTCAGGAGGCACCTGCAGCTTTATAAGAGTTCCTTCGACCAAAGGTCTTGTGGAGTGTGGTTTCTTTAGTAGACTTGGTTTCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATGTTAGTAGTCTCCCTAGGCATAGCCCTTAAAGATGCCTGCCGGCTTTTGTTCCAGCTACATTTTTaGGGTTCTCTCTGTCACTCC | + |
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Preference number: 2 (lower is better) Translates to: SMLVVSLGIALKDACRLLFQLHF*GSLCHS Trigger: GGAGTGACAGAGAGAACCTCAAAAATGTAGCTGGAA...CAAAAGCCGGCAGGCATCTTTAAGGGCTATGCCTAGGGAGACTACTAACATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGCTCAAACAGAACGGGAGTTTGGTGTGATAGGGATGGTTGTTATTCTGAAAGACTGGCCTTTCTaGCAAGAGGAGATAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: AQAQTEREFGVIGMVVILKDWPF*QEEINL Trigger: CAGGTTTATCTCCTCTTGTCAGAAAGGCCAGTCTTT...CAGAATAACAACCATCCCTATCACACCAAACTCCCGTTCTGTTTGAGCCTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAACCCTCGGGTTACCAAACCCTATGCCCATGACACTGGCCTGTGCAATGCATACAAACACACACTTTaGGGAACCTCTGTAACTGTT | + |
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Preference number: 2 (lower is better) Translates to: LNPRVTKPYAHDTGLCNAYKHTL*GTSVTV Trigger: AACAGTTACAGAGGTTCCCCAAAGTGTGTGTTTGTA...TGCATTGCACAGGCCAGTGTCATGGGCATAGGGTTTGGTAACCCGAGGGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGACAGACACAGACGACAAAACAAGCTGCAGAGCCAAATGACAACAATCGGAACACTGGGACAGTCATaGTGGTTCATTGAAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SDRHRRQNKLQSQMTTIGTLGQS*WFIEKG Trigger: CCCCTTTTCAATGAACCATCATGACTGTCCCAGTGT...TCCGATTGTTGTCATTTGGCTCTGCAGCTTGTTTTGTCGTCTGTGTCTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTAAAGATGCCTGCCGGCTTTTGTTGTGTCATTTCTCACAATACAGTATTACTGAAGACCCTGGATaGCAGAGGCACAGTAAACCC | + |
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Preference number: 2 (lower is better) Translates to: ALKDACRLLLCHFSQYSITEDPG*QRHSKP Trigger: GGGTTTACTGTGCCTCTGGCATCCAGGGTCTTCAGT...AATACTGTATTGTGAGAAATGACACAACAAAAGCCGGCAGGCATCTTTAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGATCAAGGTACATGAGTCTCTATCCCACATGAGAGTCTGTCTCTGTTTTGGTGGGGATTGTTGCTaGTGTTGTTCCAAAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LQIKVHESLSHMRVCLCFGGDCC*CCSKRP Trigger: TGGCCTTTTGGAACAACAGCAGCAACAATCCCCACC...AAAACAGAGACAGACTCTCATGTGGGATAGAGACTCATGTACCTTGATCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGATCAAGGTACATGAGTCTCTATCCCACATGAGAGTCTGTCTCTGTTTTCGGACGGAGTCTGGCTaGAGAATGAAGTGTGGTATA | + |
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Preference number: 2 (lower is better) Translates to: LQIKVHESLSHMRVCLCFRTESG*RMKCGI Trigger: TATACCACACTTCATTCTGCAGCCAGACTCCGTCCG...AAAACAGAGACAGACTCTCATGTGGGATAGAGACTCATGTACCTTGATCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTAAAGATGCCTGCCGGCTTTTGTTGTGTCATTTCTCACAATACAGTATTTTGCATAGGAGGTCTTaGCTTTGGGGGAGAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ALKDACRLLLCHFSQYSILHRRS*LWGRVW Trigger: CCAGACTCTCCCCCAAAGCCAAGACCTCCTATGCAA...AATACTGTATTGTGAGAAATGACACAACAAAAGCCGGCAGGCATCTTTAAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATGTTAGTAGTCTCCCTAGGCATAGCCCTTAAAGATGCCTGCCGGCTTTTGCACTGTCCTAGACAGTaGCAACTATTTCTTCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: SMLVVSLGIALKDACRLLHCPRQ*QLFLLY Trigger: GTACAGAAGAAATAGTTGCCACTGTCTAGGACAGTG...CAAAAGCCGGCAGGCATCTTTAAGGGCTATGCCTAGGGAGACTACTAACATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGACAGACACAGACGACAAAACAAGCTGCAGAGCCAAATGACAACAATCGGATTTCGGCAGTTTCTCTaGGAAGCTTCATTCCCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: SDRHRRQNKLQSQMTTIGFRQFL*EASFPV Trigger: TACAGGGAATGAAGCTTCTCAGAGAAACTGCCGAAA...TCCGATTGTTGTCATTTGGCTCTGCAGCTTGTTTTGTCGTCTGTGTCTGTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR-3UTR GCA 90 bp | CAATGCAGATTTCAAAAGCCGGTGAGGAGGTGTGTAGTGCATGTTTCAAAAATACCTGGGTTCTCTTGGTaGAGCCTCCACTTCAGATCT | + |
|
Preference number: 2 (lower is better) Translates to: QCRFQKPVRRCVVHVSKIPGFSW*SLHFRS Trigger: AGATCTGAAGTGGAGGCTGCACCAAGAGAACCCAGG...TATTTTTGAAACATGCACTACACACCTCCTCACCGGCTTTTGAAATCTGCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CAA 90 bp | GTAGTCTCCCTAGGCATAGCCCTTAAAGATGCCTGCCGGCTTTTGTaGTGTCATTTCTCACAATACAGTATTTCTGTTACCCGTTTAACC | + |
|
Preference number: 2 (lower is better) Translates to: VVSLGIALKDACRLL*CHFSQYSISVTRLT Trigger: GGTTAAACGGGTAACAGAAATACTGTATTGTGAGAAATGACACAACAAAAGCCGGCAGGCATCTTTAAGGGCTATGCCTAGGGAGACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAAAAATCCATGTTACACTGCCCTCCAATGCTTCCAACCCAGACCACAGCAAGCGAGACTCTGCATTaGATGAGTTTTAAAGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: TQKSMLHCPPMLPTQTTASETLH*MSFKVL Trigger: AAGGACTTTAAAACTCATCCAATGCAGAGTCTCGCT...TGCTGTGGTCTGGGTTGGAAGCATTGGAGGGCAGTGTAACATGGATTTTTGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 90 bp | TTTTTGAAACAGACTTGCTATATAGCCCAAGCTGGTCTTGAACTCTaGATGTACCTGTCTCAGCTTCCACAGTATCAGAAAGCCAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLKQTCYIAQAGLEL*MYLSQLPQYQKAKA Trigger: TGCCTTGGCTTTCTGATACTGTGGAAGCTGAGACAGGTACATCAAGAGTTCAAGACCAGCTTGGGCTATATAGCAAGTCTGTTTCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCAGATCAAGGTACATGAGTCTCTATCCCACATGAGAGTCTGTCTCTGTTTTTGTTGTGAAGTTACATaGAAACAGTTGGTCAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: LQIKVHESLSHMRVCLCFCCEVT*KQLVNS Trigger: GGAATTGACCAACTGTTTGCATGTAACTTCACAACA...AAAACAGAGACAGACTCTCATGTGGGATAGAGACTCATGTACCTTGATCTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR GCA 72 bp | CACAGGAGACCTAGTGTTTCCAGCAGTCCAGGCAAATaGCCAGGCCAGCCCCGAGTCCTCAGCCAGGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: HRRPSVSSSPGK*PGQPRVLSQGM Trigger: CATTCCCTGGCTGAGGACTCGGGGCTGGCCTGGGCATTTGCCTGGACTGCTGGAAACACTAGGTCTCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CCA 72 bp | AGCCCCACAGGGACAATGGTGCTCCGTCCCCAAATCTaGCCGGCACCATGGAAGAGGGCCTGCCTGTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: SPTGTMVLRPQI*PAPWKRACLSL Trigger: TAATGACAGGCAGGCCCTCTTCCATGGTGCCGGCCAGATTTGGGGACGGAGCACCATTGTCCCTGTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | CCAGAGAATGGGAACCAACTACTGGGAGGGGTGGGGTaGGCCCAGGCTCAAACAGAACGGGAGTTTGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PENGNQLLGGVG*AQAQTEREFGV Trigger: CACACCAAACTCCCGTTCTGTTTGAGCCTGGGCGCACCCCACCCCTCCCAGTAGTTGGTTCCCATTCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CCA 72 bp | ACTCACCAGAGAATGGGAACCAACTACTGGGAGGGGTaGGGTGCGCCCAGGCTCAAACAGAACGGGAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: THQRMGTNYWEG*GAPRLKQNGSL Trigger: CAAACTCCCGTTCTGTTTGAGCCTGGGCGCACCCCACCCCTCCCAGTAGTTGGTTCCCATTCTCTGGTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CCA 72 bp | CGAAGACGGTTCACACGTGCTCCTGAGAGAGCAGGCTaGCGAGTCTCCTCACCCTTGTCTGCACACACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RRRFTRAPERAG*RVSSPLSAHTK Trigger: TTTTGTGTGTGCAGACAAGGGTGAGGAGACTCGCCAGCCTGCTCTCTCAGGAGCACGTGTGAACCGTCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATGGGAACCAACTACTGGGAGGGGTGGGGTGCGCCCAGGCTCAAACAGAAGAGAATAAACTGGGGTaGGCCATCACTTCCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: ENGNQLLGGVGCAQAQTEENKLG*AITSQM Trigger: CATCTGGGAAGTGATGGCCAACCCCAGTTTATTCTC...TTCTGTTTGAGCCTGGGCGCACCCCACCCCTCCCAGTAGTTGGTTCCCATTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGGGAACCAACTACTGGGAGGGGTGGGGTGCGCCCAGGCTCAAACAGAACGCACGGAAGTAAGAATTaGAGCACCTCTTGGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EWEPTTGRGGVRPGSNRTHGSKN*STSWSP Trigger: TGGACTCCAAGAGGTGCTCAAATTCTTACTTCCGTG...CGTTCTGTTTGAGCCTGGGCGCACCCCACCCCTCCCAGTAGTTGGTTCCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR GCA 72 bp | CCAAAGAGCCAAGCACGGGAAACTGAAGACCCTGGATaGCAGAGGCACAGTAAACCCGTGGGAAGTTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PKSQARETEDPG*QRHSKPVGSWH Trigger: ATGCCAACTTCCCACGGGTTTACTGTGCCTCTGGCATCCAGGGTCTTCAGTTTCCCGTGCTTGGCTCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CCA 72 bp | ACAATGGTGCTCCGTCCCCAAATCTGGCCGGCACCATaGAAGAGGGCCTGCCTGTCATTAGAAATGCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TMVLRPQIWPAP*KRACLSLEMPC Trigger: ACATGGCATTTCTAATGACAGGCAGGCCCTCTTCCATGGTGCCGGCCAGATTTGGGGACGGAGCACCATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CCA 72 bp | CCCACCACGGACGGAGTCTGGCTGCAGAATGAAGTGTaGTATAGCTCAAGCTGCTTCCTGGGTTCTCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PTTDGVWLQNEV*YSSSCFLGSLG Trigger: ACCAAGAGAACCCAGGAAGCAGCTTGAGCTATACCACACTTCATTCTGCAGCCAGACTCCGTCCGTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCACTCCCACAGGACAATTCTACAGACAGGCAATCTCTATCTTCCCACCACGGGCTTCCTGGGTTCTCTaGGTGCAGCCTCCACTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTPTGQFYRQAISIFPPRASWVL*VQPPLQ Trigger: CTGAAGTGGAGGCTGCACCAAGAGAACCCAGGAAGC...CCGTGGTGGGAAGATAGAGATTGCCTGTCTGTAGAATTGTCCTGTGGGAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR TCA 72 bp | GGTCGAAGGAACTCTTATAAAGCTGCAGGTGCCTCCTaGCGCAGAGCCAGCCACCCACATCTTCTAGATACC | + |
|
Preference number: 3 (lower is better) Translates to: GRRNSYKAAGAS*RRASHPHLLDT Trigger: GGTATCTAGAAGATGTGGGTGGCTGGCTCTGCGTCAGGAGGCACCTGCAGCTTTATAAGAGTTCCTTCGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR GCA 72 bp | TACAGGAGCTGGGCAATACCAACAGATGTCTGTCCCTaGTCCTTCCCCAAGTCCCACCAGCCTCTCAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: YRSWAIPTDVCP*SFPKSHQPLKI Trigger: AATCTTGAGAGGCTGGTGGGACTTGGGGAAGGAGCAGGGACAGACATCTGTTGGTATTGCCCAGCTCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | CCTGCACCTGTGCTGGCTACAGGAATAACGTCAGCCTaGCATTGCTTAACCCTCGGGTTACCAAACCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: PAPVLATGITSA*HCLTLGLPNPM Trigger: CATAGGGTTTGGTAACCCGAGGGTTAAGCAATGGCAGGCTGACGTTATTCCTGTAGCCAGCACAGGTGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CCA 72 bp | TTATTGCATAGGAGGTCTTGGCTTTGGGGGAGAGTCTaGGTTCGGGCAGGCTGTAGGGTTTCTCACTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LLHRRSWLWGRV*VRAGCRVSHSI Trigger: GATGGAGTGAGAAACCCTACAGCCTGCCCGAACCCAGACTCTCCCCCAAAGCCAAGACCTCCTATGCAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR TCA 72 bp | CCTTCCCATTCAAATGTTCAAGTTCACTACTACACCTaGCCGCGTGGGATGCCCGTTAGCTTCAGAGCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: PSHSNVQVHYYT*PRGMPVSFRAR Trigger: ACGGGCTCTGAAGCTAACGGGCATCCCACGCGGTCAGGTGTAGTAGTGAACTTGAACATTTGAATGGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | GTCTGGCTGCAGAATGAAGTGTGGTATAGCTCAAGCTaGTTCCTGGGTTCTCTTGGTGCAGCCTCCACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VWLQNEVWYSSS*FLGSLGAASTS Trigger: TGAAGTGGAGGCTGCACCAAGAGAACCCAGGAAGCAGCTTGAGCTATACCACACTTCATTCTGCAGCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CCA 72 bp | GTCCTCAGCCAGGGAATGTATCACAGATACAGGAGCTaGGCAATACCAACAGATGTCTGTCCCTGCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLSQGMYHRYRS*AIPTDVCPCSF Trigger: GAAGGAGCAGGGACAGACATCTGTTGGTATTGCCCAGCTCCTGTATCTGTGATACATTCCCTGGCTGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCCATGACACTGGCCTGTGCAATGCAGATTTCAAAAGCCGGTGAGGAGGTGGGATTGTTGCTGCTGTaGTTCCAAAAGGCCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MPMTLACAMQISKAGEEVGLLLL*FQKATR Trigger: TCTGGTGGCCTTTTGGAACAACAGCAGCAACAATCC...CACCTCCTCACCGGCTTTTGAAATCTGCATTGCACAGGCCAGTGTCATGGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR TCA 72 bp | GACCACAGCACCCACCCACCCACCTCATTCTGCATATaGGCCTTGCCCATTAAAGAACACATGTTCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: DHSTHPPTSFCI*ALPIKEHMFRH Trigger: GTGTCTGAACATGTGTTCTTTAATGGGCAAGGCTCATATGCAGAATGAGGTGGGTGGGTGGGTGCTGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR TCA 72 bp | CTCAGCTTCCACAGTATCAGAAAGCCAAGGCAGGGGTaGACCATCCAAGCCTGTCAAAAGGCAGCCAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSFHSIRKPRQG*TIQACQKAANS Trigger: AGAATTGGCTGCCTTTTGACAGGCTTGGATGGTTCACCCCTGCCTTGGCTTTCTGATACTGTGGAAGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | GACTTAGTCCTGACAGAGAAGTTAGGTGAACAAACGTaGGTGGCTGATAGATGTGAAGACTACAGGGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: DLVLTEKLGEQT*VADRCEDYRGP Trigger: GGGGCCCCTGTAGTCTTCACATCTATCAGCCACGCACGTTTGTTCACCTAACTTCTCTGTCAGGACTAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CCA 72 bp | GGACTTAGTACTAACAGCAGAGAAGACCTGAGCCCTTaGGTTTATCTTGCACCTAAAGGCATGACCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GLSTNSREDLSP*VYLAPKGMTCA Trigger: GGCACAGGTCATGCCTTTAGGTGCAAGATAAACCCAAGGGCTCAGGTCTTCTCTGCTGTTAGTACTAAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CCA 72 bp | GAGGCAGGGCACGGAAGTAAGAATTTGAGCACCTCTTaGAGTCCACTTGTCCTTGACAAGTGGACACCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EAGHGSKNLSTS*SPLVLDKWTPF Trigger: AAAAGGTGTCCACTTGTCAAGGACAAGTGGACTCCAAGAGGTGCTCAAATTCTTACTTCCGTGCCCTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCGGGCAGGCTGTAGGGTTTCTCACTCCATCTGTTCCAACGCAGAACAGTCATAGTCATGATGGTTCATaGAAAAGGGGACACCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FGQAVGFLTPSVPTQNSHSHDGS*KRGHLC Trigger: ACAGAGGTGTCCCCTTTTCAATGAACCATCATGACT...ATGACTGTTCTGCGTTGGAACAGATGGAGTGAGAAACCCTACAGCCTGCCCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGCTGGCGAGTCTCCTCACCCTTGTCTGCACACACAAAATGTTCCACCCAGGAAACAGCCAAGAATTaGAATCTCCTGATACTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: AGWRVSSPLSAHTKCSTQETAKN*NLLILF Trigger: GAAAAGTATCAGGAGATTCAAATTCTTGGCTGTTTC...CTGGGTGGAACATTTTGTGTGTGCAGACAAGGGTGAGGAGACTCGCCAGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | CTCACTGTAGCCAGGGACAGTCACAGGAAGGCAGCGTaGACACAAAGGAAACTCACTGTATTTCTTTACGAA | + |
|
Preference number: 3 (lower is better) Translates to: LTVARDSHRKAA*TQRKLTVFLYE Trigger: TTCGTAAAGAAATACAGTGAGTTTCCTTTGTGTGCACGCTGCCTTCCTGTGACTGTCCCTGGCTACAGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | GCACCCACCCACCCACCTCATTCTGCATATGAGCCTTaGCCATTAAAGAACACATGTTCAGACACACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: APTHPPHSAYEP*PLKNTCSDTHK Trigger: TTTGTGTGTGTCTGAACATGTGTTCTTTAATGGGCAAGGCTCATATGCAGAATGAGGTGGGTGGGTGGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTCCTCAGACAGACACAGACGACAAAACAAGCTGCAGAGCCAAATGACAACGCCTGCCGGCTTTTGTaGTGTCATTTCTCACAATAC | + |
|
Preference number: 3 (lower is better) Translates to: RFLRQTQTTKQAAEPNDNACRLL*CHFSQY Trigger: GTATTGTGAGAAATGACACAACAAAAGCCGGCAGGC...GTTGTCATTTGGCTCTGCAGCTTGTTTTGTCGTCTGTGTCTGTCTGAGGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | TTCCTTTTGGAAATTAGTCTGAGAATCTTGCAAGACTaGCTCAAACTCGCTTTCGCTGAAGCACGAAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: FLLEISLRILQD*LKLAFAEARRR Trigger: CCGTCTTCGTGCTTCAGCGAAAGCGAGTTTGAGGCAGTCTTGCAAGATTCTCAGACTAATTTCCAAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | AGTTTGTTACTCCAACCGATTGCCACCTTGTTCAAATaGCATTGTGCGAAGTGCTTCCTTCCCATTCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: SLLLQPIATLFK*HCAKCFLPIQM Trigger: CATTTGAATGGGAAGGAAGCACTTCGCACAATGGCATTTGAACAAGGTGGCAATCGGTTGGAGTAACAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR GCA 72 bp | TTTCTCTTTGCTAATCCTGTGTGTTTCGATGGTCAGTaGAAGGTCAGATACAAACACACACTTTGGGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: FLFANPVCFDGQ*KVRYKHTLWGT Trigger: GGTTCCCCAAAGTGTGTGTTTGTATCTGACCTTGCACTGACCATCGAAACACACAGGATTAGCAAAGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR TCA 72 bp | TTTGAAACAGACTTGCTATATAGCCCAAGCTGGTCTTaGACTCTTGATGTACCTGTCTCAGCTTCCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FETDLLYSPSWS*TLDVPVSASTV Trigger: TACTGTGGAAGCTGAGACAGGTACATCAAGAGTTCAAGACCAGCTTGGGCTATATAGCAAGTCTGTTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR TCA 72 bp | TTATTTATTCCCTTATCAAGCACATCTTGTCCTTTGTaGGGTAAGCCAGGAACTATATTTAGCAGTGCACGC | + |
|
Preference number: 3 (lower is better) Translates to: LFIPLSSTSCPL*GKPGTIFSSAR Trigger: GCGTGCACTGCTAAATATAGTTCCTGGCTTACCTCACAAAGGACAAGATGTGCTTGATAAGGGAATAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR GCA 72 bp | ATATTTATTAAAAGTTGTCTAAAGTTAGCAACATTGTaGCACTATTACCTTTCCACACACGCACAGGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: IFIKSCLKLATL*HYYLSTHAQET Trigger: GGTCTCCTGTGCGTGTGTGGAAAGGTAATAGTGGCACAATGTTGCTAACTTTAGACAACTTTTAATAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGAAGACCCTGGATGCCAGAGGCACAGTAAACCCGTGGGAAGTTGGCATCGCGGAGGCTGAGGGCTaGAGGGCGAGCCAGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLKTLDARGTVNPWEVGIAEAEG*RASQGD Trigger: GTCCCCCTGGCTCGCCCTGCAGCCCTCAGCCTCCGC...GATGCCAACTTCCCACGGGTTTACTGTGCCTCTGGCATCCAGGGTCTTCAGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | GAATGGGAACCAACTACTGGGAGGGGTGGGGTGCGCCCAGGCTCAAACAGAACGGGTGTGGATGCACAGTaGCCGGGACACATGCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EWEPTTGRGGVRPGSNRTGVDAQ*PGHMLA Trigger: CGCGAGCATGTGTCCCGGGCACTGTGCATCCACACC...CGTTCTGTTTGAGCCTGGGCGCACCCCACCCCTCCCAGTAGTTGGTTCCCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR GCA 90 bp | CTTAACCCTCGGGTTACCAAACCCTATGCCCATGACACTGGCCTGTGCAATGCAACACTTGGCCGCCACTaGCCCCGCGTCGTCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNPRVTKPYAHDTGLCNATLGRH*PRVVRV Trigger: GACACGGACGACGCGGGGGCAGTGGCGGCCAAGTGT...TGCATTGCACAGGCCAGTGTCATGGGCATAGGGTTTGGTAACCCGAGGGTTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR CCA 90 bp | CCTCGGGTTACCAAACCCTATGCCCATGACACTGGCCTGTGCAATGCAGATTTCTGTCCAGCAGGCGTTTaGCCGGGGTTCCCCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRVTKPYAHDTGLCNADFCPAGV*PGFPGQ Trigger: CTGCCCGGGGAACCCCGGCCAAACGCCTGCTGGACA...GAAATCTGCATTGCACAGGCCAGTGTCATGGGCATAGGGTTTGGTAACCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGAGTCTGGGTTCGGGCAGGCTGTAGGGTTTCTCACTCCATCTGTTCCAAGACGTGCTCAGGAATaGAGAACTGTCCACGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGESGFGQAVGFLTPSVPRRAQE*RTVHGG Trigger: TCCGCCGTGGACAGTTCTGCATTCCTGAGCACGTCT...TGGAACAGATGGAGTGAGAAACCCTACAGCCTGCCCGAACCCAGACTCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR CCA 90 bp | CTTAACCCTCGGGTTACCAAACCCTATGCCCATGACACTGGCCTGTGCAATGCAGCCGACTGGTGGCAGTaGGCGACGGCGGAAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LNPRVTKPYAHDTGLCNAADWWQ*ATAETI Trigger: GATTGTTTCCGCCGTCGCCCACTGCCACCAGTCGGC...TGCATTGCACAGGCCAGTGTCATGGGCATAGGGTTTGGTAACCCGAGGGTTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGCTCAAACAGAACGGGAGTTTGGTGTGATAGGGATGGTTGTTATTCTGGGTCCCCCAGCACGATaGCCGACTGGTGGCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQAQTEREFGVIGMVVILGPPAR*PTGGSG Trigger: CCCACTGCCACCAGTCGGCCATCGTGCTGGGGGACC...CAGAATAACAACCATCCCTATCACACCAAACTCCCGTTCTGTTTGAGCCTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAAAAATCCATGTTACACTGCCCTCCAATGCTTCCAACCCAGACCACAGCAACACTTGGCCGCCACTaGCCCCGCGTCGTCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQKSMLHCPPMLPTQTTATLGRH*PRVVRV Trigger: GACACGGACGACGCGGGGGCAGTGGCGGCCAAGTGT...TGCTGTGGTCTGGGTTGGAAGCATTGGAGGGCAGTGTAACATGGATTTTTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | GCTAATCCTGTGTGTTTCGATGGTCAGTGCAAGGTCAGATACAAACACACACTTGCGGAGGCTGAGGGCTaGAGGGCGAGCCAGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ANPVCFDGQCKVRYKHTLAEAEG*RASQGD Trigger: GTCCCCCTGGCTCGCCCTGCAGCCCTCAGCCTCCGC...AAGTGTGTGTTTGTATCTGACCTTGCACTGACCATCGAAACACACAGGATTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR GCA 90 bp | TTCGGGCAGGCTGTAGGGTTTCTCACTCCATCTGTTCCAACGCAGAACAGTCATAGTGCCCGGGACACATaGTCGCGCTCAGCTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGQAVGFLTPSVPTQNSHSARDT*SRSARG Trigger: ACCCCTAGCTGAGCGCGAGCATGTGTCCCGGGCACT...ATGACTGTTCTGCGTTGGAACAGATGGAGTGAGAAACCCTACAGCCTGCCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR CCA 90 bp | TGCACACACAAAATGTTCCACCCAGAGATGGTCCTAATGGTGGGCGTAGGGAGTGCCGACTGGTGGCAGTaGGCGACGGCGGAAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: CTHKMFHPEMVLMVGVGSADWWQ*ATAETI Trigger: GATTGTTTCCGCCGTCGCCCACTGCCACCAGTCGGC...ACTCCCTACGCCCACCATTAGGACCATCTCTGGGTGGAACATTTTGTGTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAAAAATCCATGTTACACTGCCCTCCAATGCTTCCAACCCAGACCACAGCAAGCACGATGGCCGACTaGTGGCAGTGGGCGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TQKSMLHCPPMLPTQTTASTMAD*WQWATA Trigger: CGCCGTCGCCCACTGCCACCAGTCGGCCATCGTGCT...TGCTGTGGTCTGGGTTGGAAGCATTGGAGGGCAGTGTAACATGGATTTTTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 72 bp | AAATCAAGTCACTCAGCCCAGAGAGGCGACACCACATaGAGCCCCACAGGGACAATGGTGCTCCGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSSHSAQRGDTT*SPTGTMVLRPQ Trigger: TTGGGGACGGAGCACCATTGTCCCTGTGGGGCTCAATGTGGTGTCGCCTCTCTGGGCTGAGTGACTTGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 72 bp | GCTCCTGAGAGAGCAGGCTGGCGAGTCTCCTCACCCTaGTCTGCACACACAAAATGTTCCACCCAGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: APERAGWRVSSP*SAHTKCSTQRW Trigger: CCATCTCTGGGTGGAACATTTTGTGTGTGCAGACAAGGGTGAGGAGACTCGCCAGCCTGCTCTCTCAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGTTAGTAGTCTCCCTAGGCATAGCCCTTAAAGATGCCTGCCGGCTTTTGGGTGTGGATGCACAGTaGCCGGGACACATGCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SMLVVSLGIALKDACRLLGVDAQ*PGHMLA Trigger: CGCGAGCATGTGTCCCGGGCACTGTGCATCCACACC...CAAAAGCCGGCAGGCATCTTTAAGGGCTATGCCTAGGGAGACTACTAACATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCACCCTTGTCTGCACACACAAAATGTTCCACCCAGAGATGGTCCTAATCGCGGCCGGTGTGGATaGACAGTGCCCGGGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPHPCLHTQNVPPRDGPNRGRCG*TVPGTH Trigger: ATGTGTCCCGGGCACTGTGCATCCACACCGGCCGCG...ATTAGGACCATCTCTGGGTGGAACATTTTGTGTGTGCAGACAAGGGTGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCTTCCACAGTATCAGAAAGCCAAGGCAGGGGTGAACCATCCAAGCCTGTCACGGCGGAAACAATCTaGTTGAAGAGCCGAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SASTVSESQGRGEPSKPVTAETI*LKSRAA Trigger: GGCCGCTCGGCTCTTCAAGCAGATTGTTTCCGCCGT...GACAGGCTTGGATGGTTCACCCCTGCCTTGGCTTTCTGATACTGTGGAAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTCCTCAGACAGACACAGACGACAAAACAAGCTGCAGAGCCAAATGACAACACGATGGCCGACTGGTaGCAGTGGGCGACGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLRQTQTTKQAAEPNDNTMADW*QWATAE Trigger: TTCCGCCGTCGCCCACTGCCACCAGTCGGCCATCGT...GTTGTCATTTGGCTCTGCAGCTTGTTTTGTCGTCTGTGTCTGTCTGAGGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR CCA 90 bp | ACGGCAAACAGTTTCTCTTTGCTAATCCTGTGTGTTTCGATGGTCAGTGCAAGGAGCACGATGGCCGACTaGTGGCAGTGGGCGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TANSFSLLILCVSMVSARSTMAD*WQWATA Trigger: CGCCGTCGCCCACTGCCACCAGTCGGCCATCGTGCT...CCTTGCACTGACCATCGAAACACACAGGATTAGCAAAGAGAAACTGTTTGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR TCA 90 bp | AAACTGAAGACCCTGGATGCCAGAGGCACAGTAAACCCGTGGGAAGTTGGCATCCCTCCACAATGCCAGTaGTGTTGCTATGGGACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKTLDARGTVNPWEVGIPPQCQ*CCYGTA Trigger: TGCCGTCCCATAGCAACATCACTGGCATTGTGGAGG...GATGCCAACTTCCCACGGGTTTACTGTGCCTCTGGCATCCAGGGTCTTCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | ACGGCAAACAGTTTCTCTTTGCTAATCCTGTGTGTTTCGATGGTCAGTGCAAGGCGCGGCCGGTGTGGATaGACAGTGCCCGGGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: TANSFSLLILCVSMVSARRGRCG*TVPGTH Trigger: ATGTGTCCCGGGCACTGTGCATCCACACCGGCCGCG...CCTTGCACTGACCATCGAAACACACAGGATTAGCAAAGAGAAACTGTTTGCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGAGGGCCTGCCTGTCATTAGAAATGCCATGTGTGAGAATTATGAGGTTTGTCCAGCAGGCGTTTaGCCGGGGTTCCCCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MEEGLPVIRNAMCENYEVCPAGV*PGFPGQ Trigger: CTGCCCGGGGAACCCCGGCCAAACGCCTGCTGGACA...AACCTCATAATTCTCACACATGGCATTTCTAATGACAGGCAGGCCCTCTTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAGGCTCAAACAGAACGGGAGTTTGGTGTGATAGGGATGGTTGTTATTCTGCGGAAACAATCTGCTTaGAGAGCCGAGCGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQAQTEREFGVIGMVVILRKQSA*RAERPP Trigger: AGGAGGCCGCTCGGCTCTTCAAGCAGATTGTTTCCG...CAGAATAACAACCATCCCTATCACACCAAACTCCCGTTCTGTTTGAGCCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTGCACACACAAAATGTTCCACCCAGAGATGGTCCTAATGGTGGGCGTAGGAGAAGACGAACTTCCTaGGCTTCAGGTCCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHTQNVPPRDGPNGGRRRRRTS*ASGPPA Trigger: TGCTGGGGGACCTGAAGCTCAGGAAGTTCGTCTTCT...CCTACGCCCACCATTAGGACCATCTCTGGGTGGAACATTTTGTGTGTGCAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGAAGACCCTGGATGCCAGAGGCACAGTAAACCCGTGGGAAGTTGGCATCAAGGGCACTCGGATCTaGGTCATGAAAGGGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: KLKTLDARGTVNPWEVGIKGTRI*VMKGVS Trigger: CGATACCCCTTTCATGACTCAGATCCGAGTGCCCTT...GATGCCAACTTCCCACGGGTTTACTGTGCCTCTGGCATCCAGGGTCTTCAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGCTCAAACAGAACGGGAGTTTGGTGTGATAGGGATGGTTGTTATTCTGACGGCGGAAACAATCTaGTTGAAGAGCCGAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQAQTEREFGVIGMVVILTAETI*LKSRAA Trigger: GGCCGCTCGGCTCTTCAAGCAGATTGTTTCCGCCGT...CAGAATAACAACCATCCCTATCACACCAAACTCCCGTTCTGTTTGAGCCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTTAAAGATGCCTGCCGGCTTTTGTTGTGTCATTTCTCACAATACAGTATTGGTCCCCCAGCACGATaGCCGACTGGTGGCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALKDACRLLLCHFSQYSIGPPAR*PTGGSG Trigger: CCCACTGCCACCAGTCGGCCATCGTGCTGGGGGACC...AATACTGTATTGTGAGAAATGACACAACAAAAGCCGGCAGGCATCTTTAAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 72 bp | ACCTGTGCTGGCTACAGGAATAACGTCAGCCTGCCATaGCTTAACCCTCGGGTTACCAAACCCTATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCAGYRNNVSLP*LNPRVTKPYAH Trigger: ATGGGCATAGGGTTTGGTAACCCGAGGGTTAAGCAATGGCAGGCTGACGTTATTCCTGTAGCCAGCACAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAAAAATCCATGTTACACTGCCCTCCAATGCTTCCAACCCAGACCACAGCACGGAAACAATCTGCTTaGAGAGCCGAGCGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TQKSMLHCPPMLPTQTTARKQSA*RAERPP Trigger: AGGAGGCCGCTCGGCTCTTCAAGCAGATTGTTTCCG...TGCTGTGGTCTGGGTTGGAAGCATTGGAGGGCAGTGTAACATGGATTTTTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR GCA 90 bp | TTCGGGCAGGCTGTAGGGTTTCTCACTCCATCTGTTCCAACGCAGAACAGTCATGCTTTGGGGGAGACGTaGTCAGGAATGCAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FGQAVGFLTPSVPTQNSHALGET*SGMQNC Trigger: ACAGTTCTGCATTCCTGAGCACGTCTCCCCCAAAGC...ATGACTGTTCTGCGTTGGAACAGATGGAGTGAGAAACCCTACAGCCTGCCCGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAAAAATCCATGTTACACTGCCCTCCAATGCTTCCAACCCAGACCACAGCACTCGGATCTGAGTCATaGAAGGGGTATCGTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: TQKSMLHCPPMLPTQTTALGSES*KGYRPT Trigger: GGTCGGACGATACCCCTTTCATGACTCAGATCCGAG...TGCTGTGGTCTGGGTTGGAAGCATTGGAGGGCAGTGTAACATGGATTTTTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 72 bp | CCTTGCATCCGACACTGGGACAGTCATGATGGTTCATaGAAAAGGGGACACCTCTGTCGAGCAGCTAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCIRHWDSHDGS*KRGHLCRAANL Trigger: CAGATTAGCTGCTCGACAGAGGTGTCCCCTTTTCAATGAACCATCATGACTGTCCCAGTGTCGGATGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 72 bp | CTGCAGCAGCAAGGGGGAGTTTGTTACTCCAACCGATaGCCACCTTGTTCAAATGCCATTGTGCGAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQQQGGVCYSNR*PPCSNAIVRSA Trigger: AGCACTTCGCACAATGGCATTTGAACAAGGTGGCAATCGGTTGGAGTAACAAACTCCCCCTTGCTGCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR TCA 90 bp | ACGGCAAACAGTTTCTCTTTGCTAATCCTGTGTGTTTCGATGGTCAGTGCAAGGCCTCCACAATGCCAGTaGTGTTGCTATGGGACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TANSFSLLILCVSMVSARPPQCQ*CCYGTA Trigger: TGCCGTCCCATAGCAACATCACTGGCATTGTGGAGG...CCTTGCACTGACCATCGAAACACACAGGATTAGCAAAGAGAAACTGTTTGCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CAA 72 bp | AAGTGTGGTATAGCTCAAGCTGCTTCCTGGGTTCTCTaGGTGCAGCCTCCACTTCAGATCTTACTGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCGIAQAASWVL*VQPPLQILLSP Trigger: AGGAGACAGTAAGATCTGAAGTGGAGGCTGCACCAAGAGAACCCAGGAAGCAGCTTGAGCTATACCACACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCACCCTTGTCTGCACACACAAAATGTTCCACCCAGAGATGGTCCTAATGCAGCCATGTTTATCTaGCAGCGCATCATCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SPHPCLHTQNVPPRDGPNAAMFI*QRIIFT Trigger: GGTGAAGATGATGCGCTGTCAGATAAACATGGCTGC...ATTAGGACCATCTCTGGGTGGAACATTTTGTGTGTGCAGACAAGGGTGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTCCTCAGACAGACACAGACGACAAAACAAGCTGCAGAGCCAAATGACAACGGATGGAGTAAGATCTaGGGAGCTGTGAGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RFLRQTQTTKQAAEPNDNGWSKI*GAVSLS Trigger: TGAGAGACTCACAGCTCCTCAGATCTTACTCCATCC...GTTGTCATTTGGCTCTGCAGCTTGTTTTGTCGTCTGTGTCTGTCTGAGGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAAAAATCCATGTTACACTGCCCTCCAATGCTTCCAACCCAGACCACAGCATCACCCTTAATGATGTaGGTATCTTCCAGGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQKSMLHCPPMLPTQTTASPLMM*VSSRLS Trigger: GGAAAGCCTGGAAGATACTCACATCATTAAGGGTGA...TGCTGTGGTCTGGGTTGGAAGCATTGGAGGGCAGTGTAACATGGATTTTTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 72 bp | AAAGTAGCCAACCACCTGTCTGACTCTATTGTGTCCTaGAGCCAATGCAGCCAGAAAGTCAAAGGGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVANHLSDSIVS*SQCSQKVKGYL Trigger: GAGATACCCTTTGACTTTCTGGCTGCATTGGCTCAAGGACACAATAGAGTCAGACAGGTGGTTGGCTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 72 bp | TATGCTGCGTCCAATAGAGCAGAGAATAAACTGGGGTaGGCCATCACTTCCCAGATGCAGGACTTAGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: YAASNRAENKLG*AITSQMQDLVL Trigger: TAGTACTAAGTCCTGCATCTGGGAAGTGATGGCCAACCCCAGTTTATTCTCTGCTCTATTGGACGCAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CAA 72 bp | GCATCCGGTTTCCTTTTGGAAATTAGTCTGAGAATCTaGCAAGACTGCCTCAAACTCGCTTTCGCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGFLLEISLRI*QDCLKLAFAEA Trigger: TGCTTCAGCGAAAGCGAGTTTGAGGCAGTCTTGCAAGATTCTCAGACTAATTTCCAAAAGGAAACCGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| 3UTR CAA 72 bp | CCAAGTCTACTAAAGAAACCACACTCCACAAGACCTTaGGTCGAAGGAACTCTTATAAAGCTGCAGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLKKPHSTRP*VEGTLIKLQVP Trigger: AGGCACCTGCAGCTTTATAAGAGTTCCTTCGACCAAAGGTCTTGTGGAGTGTGGTTTCTTTAGTAGACTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| 3UTR CAA 72 bp | CTAGGCATAGCCCTTAAAGATGCCTGCCGGCTTTTGTaGTGTCATTTCTCACAATACAGTATTTCTGTTACC | + |
|
Preference number: 4 (lower is better) Translates to: LGIALKDACRLL*CHFSQYSISVT Trigger: GGTAACAGAAATACTGTATTGTGAGAAATGACACAACAAAAGCCGGCAGGCATCTTTAAGGGCTATGCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS CCA 90 bp | GCTCGCGCTCAGCTAGGGGTAGCAGCAGGTAGTCGGCGATTCGGCTaGGCCCGGGTGAGCTCACACAGCTGCCGCCGGTCCCCTGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARAQLGVAAGSRRFG*ARVSSHSCRRSPAW Trigger: CCACGCAGGGGACCGGCGGCAGCTGTGTGAGCTCACCCGGGCCCAGCCGAATCGCCGACTACCTGCTGCTACCCCTAGCTGAGCGCGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
||
| CDS-3UTR CAA 90 bp | CACAAAATGTTCCACCCAGAGATGGTCCTAATGGTGGGCGTAGGGAGTGGCGGCGAGAGGCGCGGACACTaGGCCGCCACTGCCCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: HKMFHPEMVLMVGVGSGGERRGH*AATAPA Trigger: CGCGGGGGCAGTGGCGGCCAAGTGTCCGCGCCTCTC...GCCGCCACTCCCTACGCCCACCATTAGGACCATCTCTGGGTGGAACATTTTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS TCA 90 bp | CGATGGCCGACTGGTGGCAGTGGGCGACGGCGGAAACAATCTGCTTaGAGAGCCGAGCGGCCTCCTCTTCCCGAAGCCGTTTTCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWPTGGSGRRRKQSA*RAERPPLPEAVFGS Trigger: GGAGCCGAAAACGGCTTCGGGAAGAGGAGGCCGCTCGGCTCTTCAAGCAGATTGTTTCCGCCGTCGCCCACTGCCACCAGTCGGCCATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
||
| CDS CCA 90 bp | TTCCTGAGCTTCAGGTCCCCCAGCACGATGGCCGACTGGTGGCAGTaGGCGACGGCGGAAACAATCTGCTTGAAGAGCCGAGCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLSFRSPSTMADWWQ*ATAETICLKSRAAS Trigger: GGAGGCCGCTCGGCTCTTCAAGCAGATTGTTTCCGCCGTCGCCCACTGCCACCAGTCGGCCATCGTGCTGGGGGACCTGAAGCTCAGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
||
| CDS CCA 90 bp | ACGAACTTCCTGAGCTTCAGGTCCCCCAGCACGATGGCCGACTGGTaGCAGTGGGCGACGGCGGAAACAATCTGCTTGAAGAGCCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TNFLSFRSPSTMADW*QWATAETICLKSRA Trigger: CGCTCGGCTCTTCAAGCAGATTGTTTCCGCCGTCGCCCACTGCCACCAGTCGGCCATCGTGCTGGGGGACCTGAAGCTCAGGAAGTTCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
||
| CDS-3UTR CAA 90 bp | TGCACACACAAAATGTTCCACCCAGAGATGGTCCTAATGGTGGGCGTAGGGAGTGTGTCCAGCAGGCGTTaGGCCGGGGTTCCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CTHKMFHPEMVLMVGVGSVSSRR*AGVPRA Trigger: TGCCCGGGGAACCCCGGCCAAACGCCTGCTGGACAC...ACTCCCTACGCCCACCATTAGGACCATCTCTGGGTGGAACATTTTGTGTGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR CAA 90 bp | ACCAACACACCTCTAGGCTTCCCTATGCTGCGTCCAATAGAGCAGAGAATAAACGTGTCCAGCAGGCGTTaGGCCGGGGTTCCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TNTPLGFPMLRPIEQRINVSSRR*AGVPRA Trigger: TGCCCGGGGAACCCCGGCCAAACGCCTGCTGGACAC...GTTTATTCTCTGCTCTATTGGACGCAGCATAGGGAAGCCTAGAGGTGTGTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR CAA 90 bp | GCTAATCCTGTGTGTTTCGATGGTCAGTGCAAGGTCAGATACAAACACACACTTGAGAGGCGCGGACACTaGGCCGCCACTGCCCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ANPVCFDGQCKVRYKHTLERRGH*AATAPA Trigger: CGCGGGGGCAGTGGCGGCCAAGTGTCCGCGCCTCTC...AAGTGTGTGTTTGTATCTGACCTTGCACTGACCATCGAAACACACAGGATTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118228.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGAGGTCTTGGCTTTGGGGGAGAGTCTGGGTTCGGGCAGGCTGTAGGGTTTACAATGCCAGTGATGTaGCTATGGGACGGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IGGLGFGGESGFGQAVGFTMPVM*LWDGSW Trigger: CCAGCTGCCGTCCCATAGCAACATCACTGGCATTGT...AAACCCTACAGCCTGCCCGAACCCAGACTCTCCCCCAAAGCCAAGACCTCCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS-3UTR CAA 90 bp | TTCGGGCAGGCTGTAGGGTTTCTCACTCCATCTGTTCCAACGCAGAACAGTCATATGAGGCACCTGGCTTaGGGGGAGACGTGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FGQAVGFLTPSVPTQNSHMRHLA*GETCSG Trigger: TCCTGAGCACGTCTCCCCCAAAGCCAGGTGCCTCAT...ATGACTGTTCTGCGTTGGAACAGATGGAGTGAGAAACCCTACAGCCTGCCCGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
||
| CDS GCA 72 bp | CGGGCAGCCGGAAACAGTAGACCCGGACCGCGGGGCTaGGAGGCGCCGCTCAGGGCAAAACGCACGGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: RAAGNSRPGPRG*EAPLRAKRTGP Trigger: CGGTCCCGTGCGTTTTGCCCTGAGCGGCGCCTCGCAGCCCCGCGGTCCGGGTCTACTGTTTCCGGCTGCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
||
| CDS GCA 72 bp | CGAGCACTCAGAGAGGCGCGGACACTTGGCCGCCACTaGCCCCGCGTCGTCCGTGTCCAGCAGGCGTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RALREARTLGRH*PRVVRVQQAFG Trigger: GCCAAACGCCTGCTGGACACGGACGACGCGGGGGCAGTGGCGGCCAAGTGTCCGCGCCTCTCTGAGTGCTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
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| CDS CCA 72 bp | CAGCTAGGGGTAGCAGCAGGTAGTCGGCGATTCGGCTaGGCCCGGGTGAGCTCACACAGCTGCCGCCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QLGVAAGSRRFG*ARVSSHSCRRS Trigger: GGACCGGCGGCAGCTGTGTGAGCTCACCCGGGCCCAGCCGAATCGCCGACTACCTGCTGCTACCCCTAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
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| CDS GCA 72 bp | GGAATTCCTTGCAGCGCAGCTCGCGGCCGGTGTGGATaGACAGTGCCCGGGACACATGCTCGCGCTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: GIPCSAARGRCG*TVPGTHARAQL Trigger: TAGCTGAGCGCGAGCATGTGTCCCGGGCACTGTGCATCCACACCGGCCGCGAGCTGCGCTGCAAGGAATTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
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| CDS CCA 72 bp | ATGGGGAATTCCTTGCAGCGCAGCTCGCGGCCGGTGTaGATGCACAGTGCCCGGGACACATGCTCGCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: MGNSLQRSSRPV*MHSARDTCSRS Trigger: TGAGCGCGAGCATGTGTCCCGGGCACTGTGCATCCACACCGGCCGCGAGCTGCGCTGCAAGGAATTCCCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
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| CDS TCA 72 bp | ACTGGTGGCAGTGGGCGACGGCGGAAACAATCTGCTTaGAGAGCCGAGCGGCCTCCTCTTCCCGAAGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: TGGSGRRRKQSA*RAERPPLPEAV Trigger: AACGGCTTCGGGAAGAGGAGGCCGCTCGGCTCTTCAAGCAGATTGTTTCCGCCGTCGCCCACTGCCACCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
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| CDS CCA 72 bp | TTCAGGTCCCCCAGCACGATGGCCGACTGGTGGCAGTaGGCGACGGCGGAAACAATCTGCTTGAAGAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: FRSPSTMADWWQ*ATAETICLKSR Trigger: TCGGCTCTTCAAGCAGATTGTTTCCGCCGTCGCCCACTGCCACCAGTCGGCCATCGTGCTGGGGGACCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
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| CDS CCA 72 bp | CTGAGCTTCAGGTCCCCCAGCACGATGGCCGACTGGTaGCAGTGGGCGACGGCGGAAACAATCTGCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSFRSPSTMADW*QWATAETICLK Trigger: CTTCAAGCAGATTGTTTCCGCCGTCGCCCACTGCCACCAGTCGGCCATCGTGCTGGGGGACCTGAAGCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067543.8 ENSMUST00000118228.2 |
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| CDS TCA 72 bp | GCTGGGTTCTCTCCTCGGTGGAGAAGACGAACTTCCTaGGCTTCAGGTCCCCCAGCACGATGGCCGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: AGFSPRWRRRTS*ASGPPARWPTG Trigger: ACCAGTCGGCCATCGTGCTGGGGGACCTGAAGCTCAGGAAGTTCGTCTTCTCCACCGAGGAGAGAACCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067543.8 |
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