Pregenerated sensors for TRIAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029535Ensembl transcript IDs: ENSMUST00000031508.5
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCACGGCCACCCCAGGGGTTGGAGCTGTGAGCAGCAAGGCTTGTaGGCTCCAAAGTTGGTGTTTATGTCATTTCTGAAGATTCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: LHGHPRGWSCEQQGL*APKLVFMSFLKILN Trigger: ATTCAGAATCTTCAGAAATGACATAAACACCAACTTTGGAGCTCACAAGCCTTGCTGCTCACAGCTCCAACCCCTGGGGTGGCCGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR TCA 90 bp | TGGAAGTGTTATTATAAAACTACAATCATGTTTCCAAGCAGTGATTaGATGGGTTGTGTCCGCATCCCTTTTCAGAGCATCCCTGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: WKCYYKTTIMFPSSD*MGCVRIPFQSIPER Trigger: CCTCTCAGGGATGCTCTGAAAAGGGATGCGGACACAACCCATTCAATCACTGCTTGGAAACATGATTGTAGTTTTATAATAACACTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR CAA 90 bp | CCGCTGTGGCACGAGGGGTTCTTCAGGATGCCAGCAAAGGTGAAGTaGCCTCAAAGCAGGAATGACAGCTTCAGAATGGAGGAGAACACC | + |
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Preference number: 2 (lower is better) Translates to: PLWHEGFFRMPAKVK*PQSRNDSFRMEENT Trigger: GGTGTTCTCCTCCATTCTGAAGCTGTCATTCCTGCTTTGAGGCAACTTCACCTTTGCTGGCATCCTGAAGAACCCCTCGTGCCACAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGTTGAAAGTTAGCCACAGCAAACCTGGGACGCAGGTGACTCTTGCACGGCATCTTGGAATCCCATaGCAGCTTCACAGCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: VELKVSHSKPGTQVTLARHLGIP*QLHSLP Trigger: GGGAAGGCTGTGAAGCTGGCATGGGATTCCAAGATG...CCGTGCAAGAGTCACCTGCGTCCCAGGTTTGCTGTGGCTAACTTTCAACTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCTCCGCAGCAAATGCTGCCATCCTTAATCCTGACCAGTTTACCATACTCGCCTCAAAGCAGGAATaGCAGCTTCAGAATGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RSSAANAAILNPDQFTILASKQE*QLQNGG Trigger: TCCTCCATTCTGAAGCTGTCATTCCTGCTTTGAGGC...GAGTATGGTAAACTGGTCAGGATTAAGGATGGCAGCATTTGCTGCGGAGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR CAA 90 bp | AGCAGGAATGACAGCTTCAGAATGGAGGAGAACACCTTTAACATCTaGGAATCCCATGCCAGCTTCACAGCCTTCCCTGACAGAATCCAG | + |
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Preference number: 2 (lower is better) Translates to: SRNDSFRMEENTFNI*ESHASFTAFPDRIQ Trigger: CTGGATTCTGTCAGGGAAGGCTGTGAAGCTGGCATGGGATTCCAAGATGTTAAAGGTGTTCTCCTCCATTCTGAAGCTGTCATTCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGTTGAAAGTTAGCCACAGCAAACCTGGGACGCAGGTGACTCTTGCACGGATGACAGCTTCAGAATaGAGGAGAACACCTTTAACA | + |
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Preference number: 2 (lower is better) Translates to: VELKVSHSKPGTQVTLARMTASE*RRTPLT Trigger: TGTTAAAGGTGTTCTCCTCCATTCTGAAGCTGTCAT...CCGTGCAAGAGTCACCTGCGTCCCAGGTTTGCTGTGGCTAACTTTCAACTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR-3UTR CCA 90 bp | ATAACCCAGGCCACCAGCAGTTGGAAGTGTTATTATAAAACTACAATCATGTTTATAACCCCAAGAAGCTaGTCCGCTGTGGCACGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ITQATSSWKCYYKTTIMFITPRS*SAVARG Trigger: CCCTCGTGCCACAGCGGACCAGCTTCTTGGGGTTAT...AAACATGATTGTAGTTTTATAATAACACTTCCAACTGCTGGTGGCCTGGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR-3UTR TCA 90 bp | GTTATTATAAAACTACAATCATGTTTCCAAGCAGTGATTGAATGGGTTGTGTCCCTTCACAGCCTTCCCTaGCAGAATCCAGAAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VIIKLQSCFQAVIEWVVSLHSLP*QNPEAS Trigger: AGAGGCTTCTGGATTCTGTCAGGGAAGGCTGTGAAG...GGACACAACCCATTCAATCACTGCTTGGAAACATGATTGTAGTTTTATAATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR-3UTR TCA 90 bp | GTTATTATAAAACTACAATCATGTTTCCAAGCAGTGATTGAATGGGTTGTGTCCAGCCTCTCACTTTACTaGTGTCTTCCAAGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VIIKLQSCFQAVIEWVVSSLSLY*CLPSGR Trigger: CCTGCCACTTGGAAGACATCAGTAAAGTGAGAGGCT...GGACACAACCCATTCAATCACTGCTTGGAAACATGATTGTAGTTTTATAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR-3UTR GCA 90 bp | GTTATTATAAAACTACAATCATGTTTCCAAGCAGTGATTGAATGGGTTGTGTCCTGCCAGACCATAGTTTaGAACCATAACCCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VIIKLQSCFQAVIEWVVSCQTIV*NHNPKK Trigger: CTTCTTGGGGTTATGGTTGCAAACTATGGTCTGGCA...GGACACAACCCATTCAATCACTGCTTGGAAACATGATTGTAGTTTTATAATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR-3UTR CCA 90 bp | ATAACCCAGGCCACCAGCAGTTGGAAGTGTTATTATAAAACTACAATCATGTTTACACCTTTAACATCTTaGAATCCCATGCCAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: ITQATSSWKCYYKTTIMFTPLTS*NPMPAS Trigger: TGAAGCTGGCATGGGATTCCAAGATGTTAAAGGTGT...AAACATGATTGTAGTTTTATAATAACACTTCCAACTGCTGGTGGCCTGGGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR TCA 72 bp | CACCCCAGGGGTTGGAGCTGTGAGCAGCAAGGCTTGTaGGCTCCAAAGTTGGTGTTTATGTCATTTCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: HPRGWSCEQQGL*APKLVFMSFLK Trigger: CTTCAGAAATGACATAAACACCAACTTTGGAGCTCACAAGCCTTGCTGCTCACAGCTCCAACCCCTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR TCA 72 bp | CATCTTGGAATCCCATGCCAGCTTCACAGCCTTCCCTaGCAGAATCCAGAAGCCTCTCACTTTACTGATGTC | + |
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Preference number: 3 (lower is better) Translates to: HLGIPCQLHSLP*QNPEASHFTDV Trigger: GACATCAGTAAAGTGAGAGGCTTCTGGATTCTGTCAGGGAAGGCTGTGAAGCTGGCATGGGATTCCAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR CCA 72 bp | ACAGCTTCAGAATGGAGGAGAACACCTTTAACATCTTaGAATCCCATGCCAGCTTCACAGCCTTCCCTGACA | + |
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Preference number: 3 (lower is better) Translates to: TASEWRRTPLTS*NPMPASQPSLT Trigger: TGTCAGGGAAGGCTGTGAAGCTGGCATGGGATTCCAAGATGTTAAAGGTGTTCTCCTCCATTCTGAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| CDS-3UTR TCA 90 bp | GTGGAGTTGAAAGTTAGCCACAGCAAACCTGGGACGCAGGTGACTCTTGCACGGCAGCAAACCAGCGGTTaGAGCACTGGTCGTACTCGC | + |
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Preference number: 4 (lower is better) Translates to: VELKVSHSKPGTQVTLARQQTSG*STGRTR Trigger: GCGAGTACGACCAGTGCTTCAACCGCTGGTTTGCTG...CCGTGCAAGAGTCACCTGCGTCCCAGGTTTGCTGTGGCTAACTTTCAACTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| CDS-3UTR TCA 90 bp | GCCTCCCATAGTTCACCCAGGTCCTCCGCAGCAAATGCTGCCATCCTTAATCCTACTGCTGGTAGCGTTTaGAGAGGTCGGTGCACGGGT | + |
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Preference number: 4 (lower is better) Translates to: ASHSSPRSSAANAAILNPTAGSV*RGRCTG Trigger: ACCCGTGCACCGACCTCTTCAAACGCTACCAGCAGT...AGGATTAAGGATGGCAGCATTTGCTGCGGAGGACCTGGGTGAACTATGGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| CDS-3UTR CCA 90 bp | GCCTCCCATAGTTCACCCAGGTCCTCCGCAGCAAATGCTGCCATCCTTAATCCTCAGCGGTTGAAGCACTaGTCGTACTCGCGCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: ASHSSPRSSAANAAILNPQRLKH*SYSRFM Trigger: CATGAAGCGCGAGTACGACCAGTGCTTCAACCGCTG...AGGATTAAGGATGGCAGCATTTGCTGCGGAGGACCTGGGTGAACTATGGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| CDS-3UTR GCA 90 bp | GTGGAGTTGAAAGTTAGCCACAGCAAACCTGGGACGCAGGTGACTCTTGCACGGCTCTTTCTCCTTGATTaGTTTCTGCACGCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VELKVSHSKPGTQVTLARLFLLD*FLHALL Trigger: CAGCAGTGCGTGCAGAAAGCAATCAAGGAGAAAGAG...CCGTGCAAGAGTCACCTGCGTCCCAGGTTTGCTGTGGCTAACTTTCAACTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| 3UTR CAA 72 bp | GACAGCTTCAGAATGGAGGAGAACACCTTTAACATCTaGGAATCCCATGCCAGCTTCACAGCCTTCCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: DSFRMEENTFNI*ESHASFTAFPD Trigger: GTCAGGGAAGGCTGTGAAGCTGGCATGGGATTCCAAGATGTTAAAGGTGTTCTCCTCCATTCTGAAGCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| CDS-3UTR GCA 90 bp | GTTATTATAAAACTACAATCATGTTTCCAAGCAGTGATTGAATGGGTTGTGTCCCGCGCTTCATGTCAGTaGAAGCCTCCCCGACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VIIKLQSCFQAVIEWVVSRASCQ*KPPRRC Trigger: ACAGCGTCGGGGAGGCTTGCACTGACATGAAGCGCG...GGACACAACCCATTCAATCACTGCTTGGAAACATGATTGTAGTTTTATAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| CDS-3UTR CCA 90 bp | ATAACCCAGGCCACCAGCAGTTGGAAGTGTTATTATAAAACTACAATCATGTTTGGCTTTTCTTTGCCATaGCCCATGAACTCCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ITQATSSWKCYYKTTIMFGFSLP*PMNSRP Trigger: AGGCCTGGAGTTCATGGGCCATGGCAAAGAAAAGCC...AAACATGATTGTAGTTTTATAATAACACTTCCAACTGCTGGTGGCCTGGGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| CDS-3UTR CAA 90 bp | GTGGAGTTGAAAGTTAGCCACAGCAAACCTGGGACGCAGGTGACTCTTGCACGGCCGGAGCCGTCCCCTTaGAGGAACTTCTCAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: VELKVSHSKPGTQVTLARPEPSP*RNFSAN Trigger: GTTTGCTGAGAAGTTCCTCAAAGGGGACGGCTCCGG...CCGTGCAAGAGTCACCTGCGTCCCAGGTTTGCTGTGGCTAACTTTCAACTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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| CDS-3UTR CAA 90 bp | GTGGAGTTGAAAGTTAGCCACAGCAAACCTGGGACGCAGGTGACTCTTGCACGGTCAGCAAACCAGCGGTaGAAGCACTGGTCGTACTCG | + |
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Preference number: 5 (lower is better) Translates to: VELKVSHSKPGTQVTLARSANQR*KHWSYS Trigger: CGAGTACGACCAGTGCTTCAACCGCTGGTTTGCTGA...CCGTGCAAGAGTCACCTGCGTCCCAGGTTTGCTGTGGCTAACTTTCAACTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031508.5 |
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