Pregenerated sensors for TRHR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038760Ensembl transcript IDs: ENSMUST00000038856.14, ENSMUST00000110289.4, ENSMUST00000226626.2, ENSMUST00000227505.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTaGAGGAAGACCTTTGGTCAGTTGAAACCATCCTGTTCTGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: YHPVSFQYHDVLTDF*RKTFGQLKPSCSES Trigger: TGACTCAGAACAGGATGGTTTCAACTGACCAAAGGTCTTCCTTCAGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR TCA 90 bp | CTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTaGCTTCTGAAGGAAGACCTTTGGTCAGTTGAAACCATCCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: LIVPSCIISVPRCSY*LLKEDLWSVETILF Trigger: GAACAGGATGGTTTCAACTGACCAAAGGTCTTCCTTCAGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR TCA 90 bp | TTCTTTGTTCATGTGGACACAATGGTTAATCTCCCAGCAATGAGATaGGTCAGCATACAGCTTTCTACAACTGGTGAAAGGAAACCAAAC | + |
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Preference number: 1 (lower is better) Translates to: FFVHVDTMVNLPAMR*VSIQLSTTGERKPN Trigger: GTTTGGTTTCCTTTCACCAGTTGTAGAAAGCTGTATGCTGACTCATCTCATTGCTGGGAGATTAACCATTGTGTCCACATGAACAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| 3UTR TCA 90 bp | GAAGATTCTTTGTTCATGTGGACACAATGGTTAATCTCCCAGCAATaGGATGAGTCAGCATACAGCTTTCTACAACTGGTGAAAGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: EDSLFMWTQWLISQQ*DESAYSFLQLVKGN Trigger: GTTTCCTTTCACCAGTTGTAGAAAGCTGTATGCTGACTCATCTCATTGCTGGGAGATTAACCATTGTGTCCACATGAACAAAGAATCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| 3UTR GCA 90 bp | TATGCACAAGAACTGAGTCCATTTTTCTATAAAGAGAGAGTCACTTaGAAGCTTGCAATGATGCTAGCCAACAGTACTGATTACCCCATT | + |
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Preference number: 1 (lower is better) Translates to: YAQELSPFFYKERVT*KLAMMLANSTDYPI Trigger: AATGGGGTAATCAGTACTGTTGGCTAGCATCATTGCAAGCTTGCAAGTGACTCTCTCTTTATAGAAAAATGGACTCAGTTCTTGTGCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| 3UTR TCA 90 bp | GAGACTCTACAGTGTGAACCTCCATCAAGGCTTACAGTCATTATTTaGCTATGTGGTTTATTGGTCACTAAATTCTTGTCTTGCTACATC | + |
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Preference number: 1 (lower is better) Translates to: ETLQCEPPSRLTVII*LCGLLVTKFLSCYI Trigger: GATGTAGCAAGACAAGAATTTAGTGACCAATAAACCACATAGTCAAATAATGACTGTAAGCCTTGATGGAGGTTCACACTGTAGAGTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| 3UTR TCA 90 bp | CAATGTCAGGCTCATCATCTTAGTTTAATTTGTGGGATACAAACATaGAATGAGCTTGTCCTACATGGGGTTTTCTGTTTATTTGCCTAT | + |
|
Preference number: 1 (lower is better) Translates to: QCQAHHLSLICGIQT*NELVLHGVFCLFAY Trigger: ATAGGCAAATAAACAGAAAACCCCATGTAGGACAAGCTCATTTCATGTTTGTATCCCACAAATTAAACTAAGATGATGAGCCTGACATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR CCA 90 bp | GCCAGTAATTTTTGTATATATCAAACCAAGAATGGCTTGTCCTCATaGCTAGGGATTAAATTTTGCTTCCTTATTGTACCATCCTGTATC | + |
|
Preference number: 1 (lower is better) Translates to: ASNFCIYQTKNGLSS*LGIKFCFLIVPSCI Trigger: GATACAGGATGGTACAATAAGGAAGCAAAATTTAATCCCTAGCCATGAGGACAAGCCATTCTTGGTTTGATATATACAAAAATTACTGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTTAGAAGCTAAGGAGTTTCACTGCTTATCAGTTTCACATTTAATACGGATGATATCAAACCAAGAATaGCTTGTCCTCATGGCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLEAKEFHCLSVSHLIRMISNQE*LVLMAR Trigger: CCTAGCCATGAGGACAAGCCATTCTTGGTTTGATAT...CATCCGTATTAAATGTGAAACTGATAAGCAGTGAAACTCCTTAGCTTCTAACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTAAAGAGAGAGTCACTTaGAAGCTTGCAATGATGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PYCTILYHFSTTMFLLTSKERVT*KLAMML Trigger: TAGCATCATTGCAAGCTTGCAAGTGACTCTCTCTTT...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| 3UTR-3UTR TCA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTAGTTCAAGATGTTCTTaGAGAAGTTCATATTCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PYCTILYHFSTTMFLLTSSSRCS*RSSYSL Trigger: GAGCGAATATGAACTTCTTCAAGAACATCTTGAACT...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGGTCCATTTTTATCCATaGTCACTCTTGTCAAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QFKMFLKKFIFALVWQSKVHFYP*SLLSKK Trigger: CTTCTTTGACAAGAGTGATCATGGATAAAAATGGAC...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110289.4 ENSMUST00000226626.2 |
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| 3UTR-3UTR TCA 90 bp | TACACATACAAAAACAGTTTCACACTGCAGAGAGAACACATAATATCGCACTTTGTCCATTTTTATCCATaGTCACTCTTGTCAAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: YTYKNSFTLQREHIISHFVHFYP*SLLSKK Trigger: CTTCTTTGACAAGAGTGATCATGGATAAAAATGGAC...AAAGTGCGATATTATGTGTTCTCTCTGCAGTGTGAAACTGTTTTTGTATGTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| 3UTR-3UTR GCA 90 bp | TCTAAACCAGGTCTAATCTTAAAAGAACTTTCAAGCTTCCCTAACAGGTTGTTCCAAAGAAAAGCTATATaGACAAGAACTGAGTCCATT | + |
|
Preference number: 2 (lower is better) Translates to: SKPGLILKELSSFPNRLFQRKAI*TRTESI Trigger: AATGGACTCAGTTCTTGTGCATATAGCTTTTCTTTG...GAACAACCTGTTAGGGAAGCTTGAAAGTTCTTTTAAGATTAGACCTGGTTTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR-3UTR GCA 90 bp | TCTAAACCAGGTCTAATCTTAAAAGAACTTTCAAGCTTCCCTAACAGGTTGTTCCTAGGGATTAAATTTTaGTTCCTTATTGTACCATCC | + |
|
Preference number: 2 (lower is better) Translates to: SKPGLILKELSSFPNRLFLGIKF*FLIVPS Trigger: GGATGGTACAATAAGGAAGCAAAATTTAATCCCTAG...GAACAACCTGTTAGGGAAGCTTGAAAGTTCTTTTAAGATTAGACCTGGTTTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR TCA 72 bp | CATGTGGACACAATGGTTAATCTCCCAGCAATGAGATaGGTCAGCATACAGCTTTCTACAACTGGTGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HVDTMVNLPAMR*VSIQLSTTGER Trigger: CCTTTCACCAGTTGTAGAAAGCTGTATGCTGACTCATCTCATTGCTGGGAGATTAACCATTGTGTCCACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| 3UTR TCA 72 bp | CCATCCTGTATCATTTCAGTACCACGATGTTCTTACTaGCTTCTGAAGGAAGACCTTTGGTCAGTTGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: PSCIISVPRCSY*LLKEDLWSVET Trigger: GGTTTCAACTGACCAAAGGTCTTCCTTCAGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR TCA 72 bp | TTGTTCATGTGGACACAATGGTTAATCTCCCAGCAATaGGATGAGTCAGCATACAGCTTTCTACAACTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFMWTQWLISQQ*DESAYSFLQLV Trigger: CACCAGTTGTAGAAAGCTGTATGCTGACTCATCTCATTGCTGGGAGATTAACCATTGTGTCCACATGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| 3UTR TCA 72 bp | CACTTGCAAGCTTGCAATGATGCTAGCCAACAGTACTaGTTACCCCATTCTCTTAGCATAACTGTCAATATG | + |
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Preference number: 3 (lower is better) Translates to: HLQACNDASQQY*LPHSLSITVNM Trigger: CATATTGACAGTTATGCTAAGAGAATGGGGTAATCAGTACTGTTGGCTAGCATCATTGCAAGCTTGCAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| 3UTR TCA 72 bp | GTATCATTTCAGTACCACGATGTTCTTACTGACTTCTaGAGGAAGACCTTTGGTCAGTTGAAACCATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VSFQYHDVLTDF*RKTFGQLKPSC Trigger: ACAGGATGGTTTCAACTGACCAAAGGTCTTCCTTCAGAAGTCAGTAAGAACATCGTGGTACTGAAATGATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTTAGAAGCTAAGGAGTTTCACTGCTTATCAGTTTCACATTTAATACGGATGTTCCCAGTATGTAACTaGCCTGAAGACATCTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GLEAKEFHCLSVSHLIRMFPVCN*PEDICC Trigger: GCAACAGATGTCTTCAGGCAAGTTACATACTGGGAA...CATCCGTATTAAATGTGAAACTGATAAGCAGTGAAACTCCTTAGCTTCTAACCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCCATTATTCCAGTTGAGACTCTACAGTGTGAACCTCCATCAAGGCTTACAGGATGTAGTCCGTAAGTaGCTGAAAATCTTAATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FPLFQLRLYSVNLHQGLQDVVRK*LKILIV Trigger: CACTATTAAGATTTTCAGCAACTTACGGACTACATC...CTGTAAGCCTTGATGGAGGTTCACACTGTAGAGTCTCAACTGGAATAATGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| 3UTR-3UTR CAA 90 bp | TCTAAACCAGGTCTAATCTTAAAAGAACTTTCAAGCTTCCCTAACAGGTTGTTCAAGACCTTTGGTCAGTaGAAACCATCCTGTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SKPGLILKELSSFPNRLFKTFGQ*KPSCSE Trigger: CTCAGAACAGGATGGTTTCAACTGACCAAAGGTCTT...GAACAACCTGTTAGGGAAGCTTGAAAGTTCTTTTAAGATTAGACCTGGTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR GCA 72 bp | GAACTGAGTCCATTTTTCTATAAAGAGAGAGTCACTTaGAAGCTTGCAATGATGCTAGCCAACAGTACTGAT | + |
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Preference number: 3 (lower is better) Translates to: ELSPFFYKERVT*KLAMMLANSTD Trigger: ATCAGTACTGTTGGCTAGCATCATTGCAAGCTTGCAAGTGACTCTCTCTTTATAGAAAAATGGACTCAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| 3UTR-3UTR CAA 90 bp | TCTAAACCAGGTCTAATCTTAAAAGAACTTTCAAGCTTCCCTAACAGGTTGTTCCATATTCGCTCTTGTTaGGCAGTCAAAGAAAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: SKPGLILKELSSFPNRLFHIRSC*AVKEKL Trigger: TAGCTTTTCTTTGACTGCCAAACAAGAGCGAATATG...GAACAACCTGTTAGGGAAGCTTGAAAGTTCTTTTAAGATTAGACCTGGTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR-3UTR CAA 90 bp | TACACATACAAAAACAGTTTCACACTGCAGAGAGAACACATAATATCGCACTTTGGTTATTCAAGGGTCTaGAAGCATATATGTAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: YTYKNSFTLQREHIISHFGYSRV*KHICRG Trigger: GCCTCTACATATATGCTTCAAGACCCTTGAATAACC...AAAGTGCGATATTATGTGTTCTCTCTGCAGTGTGAAACTGTTTTTGTATGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| 3UTR TCA 72 bp | CAGTGTGAACCTCCATCAAGGCTTACAGTCATTATTTaGCTATGTGGTTTATTGGTCACTAAATTCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: QCEPPSRLTVII*LCGLLVTKFLS Trigger: AGACAAGAATTTAGTGACCAATAAACCACATAGTCAAATAATGACTGTAAGCCTTGATGGAGGTTCACACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| 3UTR TCA 72 bp | GTTTGGCAGTCAAAGAAAAGCTATATGCACAAGAACTaGGTCCATTTTTCTATAAAGAGAGAGTCACTTGCA | + |
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Preference number: 3 (lower is better) Translates to: VWQSKKSYMHKN*VHFSIKRESLA Trigger: TGCAAGTGACTCTCTCTTTATAGAAAAATGGACTCAGTTCTTGTGCATATAGCTTTTCTTTGACTGCCAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| 3UTR TCA 72 bp | CACAATATATACACAGGGATAGTTGTGACCACTCTCTaGCACAATATAGTACATTTTAATGAGCCAGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: HNIYTGIVVTTL*HNIVHFNEPGE Trigger: TTCTCCTGGCTCATTAAAATGTACTATATTGTGTCAGAGAGTGGTCACAACTATCCCTGTGTATATATTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR GCA 72 bp | TATTCGCTCTTGTTTGGCAGTCAAAGAAAAGCTATATaGACAAGAACTGAGTCCATTTTTATCCATGATCAC | + |
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Preference number: 3 (lower is better) Translates to: YSLLFGSQRKAI*TRTESIFIHDH Trigger: GTGATCATGGATAAAAATGGACTCAGTTCTTGTGCATATAGCTTTTCTTTGACTGCCAAACAAGAGCGAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110289.4 ENSMUST00000226626.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGGATGTAGTCCGTAAGTaGCTGAAAATCTTAATAGTG | + |
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Preference number: 3 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKDVVRK*LKILIV Trigger: CACTATTAAGATTTTCAGCAACTTACGGACTACATC...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
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| 3UTR-3UTR CAA 90 bp | TCTAAACCAGGTCTAATCTTAAAAGAACTTTCAAGCTTCCCTAACAGGTTGTTCGAGGCTCAGAACAAATaGATTTTCAGAATGTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: SKPGLILKELSSFPNRLFEAQNK*IFRMCS Trigger: TGAACACATTCTGAAAATCAATTTGTTCTGAGCCTC...GAACAACCTGTTAGGGAAGCTTGAAAGTTCTTTTAAGATTAGACCTGGTTTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| 3UTR CCA 72 bp | CAAGGCTTACAGTCATTATTTGACTATGTGGTTTATTaGTCACTAAATTCTTGTCTTGCTACATCCAGATTT | + |
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Preference number: 3 (lower is better) Translates to: QGLQSLFDYVVY*SLNSCLATSRF Trigger: AAATCTGGATGTAGCAAGACAAGAATTTAGTGACCAATAAACCACATAGTCAAATAATGACTGTAAGCCTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| CDS-3UTR GCA 90 bp | AACAGAATTACAACCACTGCGAGCATCTTGGTGACCTGCTTCCTGGAAGATACACTCGAGGGCCACAGCTaGTTGTGGCTGGAGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: NRITTTASILVTCFLEDTLEGHS*LWLELG Trigger: ACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTCGAG...TGTATCTTCCAGGAAGCAGGTCACCAAGATGCTCGCAGTGGTTGTAATTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227505.2 |
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| CDS-3UTR CCA 90 bp | AAGGGCAAACAGAATTACAACCACTGCGAGCATCTTGGTGACCTGCTTCCTGGAGGCCACAGCTGCTTGTaGCTGGAGCTCGGTTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: KGKQNYNHCEHLGDLLPGGHSCL*LELGLV Trigger: AACCAAACCGAGCTCCAGCCACAAGCAGCTGTGGCC...TCCAGGAAGCAGGTCACCAAGATGCTCGCAGTGGTTGTAATTCTGTTTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227505.2 |
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| CDS-3UTR TCA 90 bp | AAACAGAATTACAACCACTGCGAGCATCTTGGTGACCTGCTTCCTGGAAGATACCCACCAGGACTACCATaGTGTTGCCCACAATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KQNYNHCEHLGDLLPGRYPPGLP*CCPQCP Trigger: TGGGCATTGTGGGCAACATCATGGTAGTCCTGGTGG...GTATCTTCCAGGAAGCAGGTCACCAAGATGCTCGCAGTGGTTGTAATTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227505.2 |
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| CDS-3UTR GCA 90 bp | GCCAGTAATTTTTGTATATATCAAACCAAGAATGGCTTGTCCTCATGGCTAGGGCTCGAGGGCCACAGCTaGTTGTGGCTGGAGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: ASNFCIYQTKNGLSSWLGLEGHS*LWLELG Trigger: ACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTCGAG...CCCTAGCCATGAGGACAAGCCATTCTTGGTTTGATATATACAAAAATTACTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGCTCGAGGGCCACAGCTaGTTGTGGCTGGAGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: TASQYVTCLKTSVAELFELEGHS*LWLELG Trigger: ACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTCGAG...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
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| CDS-3UTR CCA 90 bp | TTCCCATTATTCCAGTTGAGACTCTACAGTGTGAACCTCCATCAAGGCTTACAGGGCCACAGCTGCTTGTaGCTGGAGCTCGGTTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: FPLFQLRLYSVNLHQGLQGHSCL*LELGLV Trigger: AACCAAACCGAGCTCCAGCCACAAGCAGCTGTGGCC...CTGTAAGCCTTGATGGAGGTTCACACTGTAGAGTCTCAACTGGAATAATGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
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| CDS-3UTR GCA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTCTCGAGGGCCACAGCTaGTTGTGGCTGGAGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: PYCTILYHFSTTMFLLTSLEGHS*LWLELG Trigger: ACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTCGAG...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| CDS-3UTR TCA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGCCACCAGGACTACCATaGTGTTGCCCACAATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TASQYVTCLKTSVAELFEPPGLP*CCPQCP Trigger: TGGGCATTGTGGGCAACATCATGGTAGTCCTGGTGG...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTAATTTTTGTATATATCAAACCAAGAATGGCTTGTCCTCATGGCTAGGGCCACCAGGACTACCATaGTGTTGCCCACAATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ASNFCIYQTKNGLSSWLGPPGLP*CCPQCP Trigger: TGGGCATTGTGGGCAACATCATGGTAGTCCTGGTGG...CCCTAGCCATGAGGACAAGCCATTCTTGGTTTGATATATACAAAAATTACTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
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| CDS-3UTR CCA 90 bp | AAACAGAATTACAACCACTGCGAGCATCTTGGTGACCTGCTTCCTGGAAGATACGGCTGGAGCTCGGTTTaGTTCATTTCACTGACAGTA | + |
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Preference number: 4 (lower is better) Translates to: KQNYNHCEHLGDLLPGRYGWSSV*FISLTV Trigger: TACTGTCAGTGAAATGAACCAAACCGAGCTCCAGCC...GTATCTTCCAGGAAGCAGGTCACCAAGATGCTCGCAGTGGTTGTAATTCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227505.2 |
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| CDS-3UTR CCA 90 bp | GGGTTAGAAGCTAAGGAGTTTCACTGCTTATCAGTTTCACATTTAATACGGATGGGCCACAGCTGCTTGTaGCTGGAGCTCGGTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLEAKEFHCLSVSHLIRMGHSCL*LELGLV Trigger: AACCAAACCGAGCTCCAGCCACAAGCAGCTGTGGCC...CATCCGTATTAAATGTGAAACTGATAAGCAGTGAAACTCCTTAGCTTCTAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
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| CDS-3UTR CCA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGTACTGTCGGTTATGTTaGGGAGGCCTGCAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: TASQYVTCLKTSVAELFEYCRLC*GGLQPP Trigger: TGGTGGCTGCAGGCCTCCCCAACATAACCGACAGTA...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
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| CDS-3UTR TCA 90 bp | TTCCCATTATTCCAGTTGAGACTCTACAGTGTGAACCTCCATCAAGGCTTACAGAGAGAAACTGGGCTTTaGTGGGGTGACAGATTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FPLFQLRLYSVNLHQGLQRETGL*WGDRLL Trigger: TAGCAATCTGTCACCCCATCAAAGCCCAGTTTCTCT...CTGTAAGCCTTGATGGAGGTTCACACTGTAGAGTCTCAACTGGAATAATGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGGGCCACAGCTGCTTGTaGCTGGAGCTCGGTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKGHSCL*LELGLV Trigger: AACCAAACCGAGCTCCAGCCACAAGCAGCTGTGGCC...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGTACTGTCGGTTATGTTaGGGAGGCCTGCAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QFKMFLKKFIFALVWQSKYCRLC*GGLQPP Trigger: TGGTGGCTGCAGGCCTCCCCAACATAACCGACAGTA...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTAGAAGCTAAGGAGTTTCACTGCTTATCAGTTTCACATTTAATACGGATGTACTGTCGGTTATGTTaGGGAGGCCTGCAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLEAKEFHCLSVSHLIRMYCRLC*GGLQPP Trigger: TGGTGGCTGCAGGCCTCCCCAACATAACCGACAGTA...CATCCGTATTAAATGTGAAACTGATAAGCAGTGAAACTCCTTAGCTTCTAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTGAAGCATATATGTAGAGGCTCAGAACAAATTGATTTTCAGAATGTGTTCCCACCAGGACTACCATaGTGTTGCCCACAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLKHICRGSEQIDFQNVFPPGLP*CCPQCP Trigger: TGGGCATTGTGGGCAACATCATGGTAGTCCTGGTGG...GAACACATTCTGAAAATCAATTTGTTCTGAGCCTCTACATATATGCTTCAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGTAATTTTTGTATATATCAAACCAAGAATGGCTTGTCCTCATGGCTAGGGAGAGAAACTGGGCTTTaGTGGGGTGACAGATTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ASNFCIYQTKNGLSSWLGRETGL*WGDRLL Trigger: TAGCAATCTGTCACCCCATCAAAGCCCAGTTTCTCT...CCCTAGCCATGAGGACAAGCCATTCTTGGTTTGATATATACAAAAATTACTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTTGTGCTGAAGCGGTCTaGCTCCTTGATGACACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PYCTILYHFSTTMFLLTSCAEAV*LLDDTV Trigger: TACAGTGTCATCAAGGAGTCAGACCGCTTCAGCACA...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGGTAGGGGTTCTCATGTaGTTTGTTCTCATGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: TASQYVTCLKTSVAELFEVGVLM*FVLMTT Trigger: GGTGGTCATGAGAACAAAGCACATGAGAACCCCTAC...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGCAGAACCATGAGATCTaGCACAGCCAGACTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFKMFLKKFIFALVWQSKQNHEI*HSQTYQ Trigger: CTGGTAAGTCTGGCTGTGGCAGATCTCATGGTTCTG...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTAGAAGCTAAGGAGTTTCACTGCTTATCAGTTTCACATTTAATACGGATGCAGAACCATGAGATCTaGCACAGCCAGACTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLEAKEFHCLSVSHLIRMQNHEI*HSQTYQ Trigger: CTGGTAAGTCTGGCTGTGGCAGATCTCATGGTTCTG...CATCCGTATTAAATGTGAAACTGATAAGCAGTGAAACTCCTTAGCTTCTAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGAGCATCTTGGTGACCTaGTTCCTGGAAGATACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TASQYVTCLKTSVAELFESILVT*FLEDTV Trigger: CACTGTATCTTCCAGGAAGCAGGTCACCAAGATGCT...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGTAATTTTTGTATATATCAAACCAAGAATGGCTTGTCCTCATGGCTAGGGGGCTGGAGCTCGGTTTaGTTCATTTCACTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASNFCIYQTKNGLSSWLGGWSSV*FISLTV Trigger: TACTGTCAGTGAAATGAACCAAACCGAGCTCCAGCC...CCCTAGCCATGAGGACAAGCCATTCTTGGTTTGATATATACAAAAATTACTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGGGCTGGAGCTCGGTTTaGTTCATTTCACTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TASQYVTCLKTSVAELFEGWSSV*FISLTV Trigger: TACTGTCAGTGAAATGAACCAAACCGAGCTCCAGCC...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTTGGGCTTTGATGGGGTaGCAGATTGCTATGTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PYCTILYHFSTTMFLLTSWALMG*QIAMYL Trigger: AAGGTACATAGCAATCTGTCACCCCATCAAAGCCCA...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGTGTGCTGAAGCGGTCTaGCTCCTTGATGACACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKCAEAV*LLDDTV Trigger: TACAGTGTCATCAAGGAGTCAGACCGCTTCAGCACA...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGCAGAACCATGAGATCTaGCACAGCCAGACTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKQNHEI*HSQTYQ Trigger: CTGGTAAGTCTGGCTGTGGCAGATCTCATGGTTCTG...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAGCATCTTGGTGACCTaGTTCCTGGAAGATACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFKMFLKKFIFALVWQSKSILVT*FLEDTV Trigger: CACTGTATCTTCCAGGAAGCAGGTCACCAAGATGCT...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTCAGAATTACAACCACTaGGAGCATCTTGGTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYCTILYHFSTTMFLLTSQNYNH*EHLGDL Trigger: CAGGTCACCAAGATGCTCGCAGTGGTTGTAATTCTG...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGCAGAATTACAACCACTaGGAGCATCTTGGTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFKMFLKKFIFALVWQSKQNYNH*EHLGDL Trigger: CAGGTCACCAAGATGCTCGCAGTGGTTGTAATTCTG...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTAGAAGCTAAGGAGTTTCACTGCTTATCAGTTTCACATTTAATACGGATGGGCTGGAGCTCGGTTTaGTTCATTTCACTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLEAKEFHCLSVSHLIRMGWSSV*FISLTV Trigger: TACTGTCAGTGAAATGAACCAAACCGAGCTCCAGCC...CATCCGTATTAAATGTGAAACTGATAAGCAGTGAAACTCCTTAGCTTCTAACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTGTGAGTAGTAGTTCCTaGAGATCTTGTAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYCTILYHFSTTMFLLTSVSSSS*RSCSHR Trigger: CCTGTGGCTACAAGATCTCCAGGAACTACTACTCAC...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGAGAGAAACTGGGCTTTaGTGGGGTGACAGATTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKRETGL*WGDRLL Trigger: TAGCAATCTGTCACCCCATCAAAGCCCAGTTTCTCT...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTAATTGCAGAGCTTCCTaGAGGCTGCACGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PYCTILYHFSTTMFLLTSNCRAS*RLHEIS Trigger: AGAAATTTCGTGCAGCCTTCAGGAAGCTCTGCAATT...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | TACACATACAAAAACAGTTTCACACTGCAGAGAGAACACATAATATCGCACTTTTGTGCTGAAGCGGTCTaGCTCCTTGATGACACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YTYKNSFTLQREHIISHFCAEAV*LLDDTV Trigger: TACAGTGTCATCAAGGAGTCAGACCGCTTCAGCACA...AAAGTGCGATATTATGTGTTCTCTCTGCAGTGTGAAACTGTTTTTGTATGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGGGACACTTTTGTGGTTaGCACATACGTATCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKGHFCG*HIRIGD Trigger: GTCACCGATACGTATGTGTCAACCACAAAAGTGTCC...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGGATGGGGTGACAGATTaGTATGTACCTTTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TASQYVTCLKTSVAELFEDGVTD*YVPFNG Trigger: ACCATTGAAAGGTACATAGCAATCTGTCACCCCATC...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAACCAGGTCTAATCTTAAAAGAACTTTCAAGCTTCCCTAACAGGTTGTTCAGCATCTTGGTGACCTaGTTCCTGGAAGATACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPGLILKELSSFPNRLFSILVT*FLEDTV Trigger: CACTGTATCTTCCAGGAAGCAGGTCACCAAGATGCT...GAACAACCTGTTAGGGAAGCTTGAAAGTTCTTTTAAGATTAGACCTGGTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTGAAGCATATATGTAGAGGCTCAGAACAAATTGATTTTCAGAATGTGTTCACAGCTGCTTGTGGCTaGAGCTCGGTTTGGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLKHICRGSEQIDFQNVFTAACG*SSVWFI Trigger: AATGAACCAAACCGAGCTCCAGCCACAAGCAGCTGT...GAACACATTCTGAAAATCAATTTGTTCTGAGCCTCTACATATATGCTTCAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATAGTGAGTAGTAGTTCCTaGAGATCTTGTAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQYVTCLKTSVAELFEIIVSSSS*RSCSHR Trigger: CCTGTGGCTACAAGATCTCCAGGAACTACTACTCAC...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGGTGAGTAGTAGTTCCTaGAGATCTTGTAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKVSSSS*RSCSHR Trigger: CCTGTGGCTACAAGATCTCCAGGAACTACTACTCAC...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGGAGGTTGTAAATCACTaGGTTGATGGCACTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFKMFLKKFIFALVWQSKEVVNH*VDGTVE Trigger: CTCAACAGTGCCATCAACCCAGTGATTTACAACCTC...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGCAAAGGACACTTTTGTaGTTGACACATACGTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: TASQYVTCLKTSVAELFEQRTLL*LTHTYR Trigger: CCGATACGTATGTGTCAACCACAAAAGTGTCCTTTG...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGTGGAGAGAAATGAGTTaGCAACCACAAGAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKWREMS*QPQESC Trigger: ACAGGACTCTTGTGGTTGTCAACTCATTTCTCTCCA...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | TCTAAACCAGGTCTAATCTTAAAAGAACTTTCAAGCTTCCCTAACAGGTTGTTCTGGAGAGAAATGAGTTaGCAACCACAAGAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKPGLILKELSSFPNRLFWREMS*QPQESC Trigger: ACAGGACTCTTGTGGTTGTCAACTCATTTCTCTCCA...GAACAACCTGTTAGGGAAGCTTGAAAGTTCTTTTAAGATTAGACCTGGTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATAAATTGCAGAGCTTCCTaGAGGCTGCACGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQYVTCLKTSVAELFEIINCRAS*RLHEIS Trigger: AGAAATTTCGTGCAGCCTTCAGGAAGCTCTGCAATT...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTGAAGCATATATGTAGAGGCTCAGAACAAATTGATTTTCAGAATGTGTTCGGACACTTTTGTGGTTaGCACATACGTATCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLKHICRGSEQIDFQNVFGHFCG*HIRIGD Trigger: GTCACCGATACGTATGTGTCAACCACAAAAGTGTCC...GAACACATTCTGAAAATCAATTTGTTCTGAGCCTCTACATATATGCTTCAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATAGAGGTTGTAAATCACTaGGTTGATGGCACTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQYVTCLKTSVAELFEIIEVVNH*VDGTVE Trigger: CTCAACAGTGCCATCAACCCAGTGATTTACAACCTC...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGCAAAGGACACTTTTGTaGTTGACACATACGTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: QFKMFLKKFIFALVWQSKQRTLL*LTHTYR Trigger: CCGATACGTATGTGTCAACCACAAAAGTGTCCTTTG...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGGATGGGGTGACAGATTaGTATGTACCTTTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKDGVTD*YVPFNG Trigger: ACCATTGAAAGGTACATAGCAATCTGTCACCCCATC...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATAGATGGGGTGACAGATTaGTATGTACCTTTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQYVTCLKTSVAELFEIIDGVTD*YVPFNG Trigger: ACCATTGAAAGGTACATAGCAATCTGTCACCCCATC...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CCA 90 bp | TACACATACAAAAACAGTTTCACACTGCAGAGAGAACACATAATATCGCACTTTCAAAGGACACTTTTGTaGTTGACACATACGTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: YTYKNSFTLQREHIISHFQRTLL*LTHTYR Trigger: CCGATACGTATGTGTCAACCACAAAAGTGTCCTTTG...AAAGTGCGATATTATGTGTTCTCTCTGCAGTGTGAAACTGTTTTTGTATGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
||
| 3UTR CAA 72 bp | GCCAGTAATTTTTGTATATATCAAACCAAGAATGGCTaGTCCTCATGGCTAGGGATTAAATTTTGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASNFCIYQTKNG*SSWLGIKFCFL Trigger: AAGGAAGCAAAATTTAATCCCTAGCCATGAGGACAAGCCATTCTTGGTTTGATATATACAAAAATTACTGGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS GCA 90 bp | GTCGGTTATGTTGGGGAGGCCTGCAGCCACCAGAACCATGAGATCTaGCACAGCCAGACTTACCAGGTAACAGTTTGTAGGGGTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VGYVGEACSHQNHEI*HSQTYQVTVCRGSH Trigger: ATGAGAACCCCTACAAACTGTTACCTGGTAAGTCTGGCTGTGGCAGATCTCATGGTTCTGGTGGCTGCAGGCCTCCCCAACATAACCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | AACAGAATTACAACCACTGCGAGCATCTTGGTGACCTGCTTCCTGGAAGATACAGAGGGCCACAGCTGCTaGTGGCTGGAGCTCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NRITTTASILVTCFLEDTEGHSC*WLELGL Trigger: CAAACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTC...TGTATCTTCCAGGAAGCAGGTCACCAAGATGCTCGCAGTGGTTGTAATTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227505.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCATTATTCCAGTTGAGACTCTACAGTGTGAACCTCCATCAAGGCTTACAGATACTGTCGGTTATGTaGGGGAGGCCTGCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FPLFQLRLYSVNLHQGLQILSVM*GRPAAT Trigger: GGTGGCTGCAGGCCTCCCCAACATAACCGACAGTAT...CTGTAAGCCTTGATGGAGGTTCACACTGTAGAGTCTCAACTGGAATAATGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
||
| CDS-3UTR CAA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGGAGGGCCACAGCTGCTaGTGGCTGGAGCTCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QFKMFLKKFIFALVWQSKEGHSC*WLELGL Trigger: CAAACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTC...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATAGAGGGCCACAGCTGCTaGTGGCTGGAGCTCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQYVTCLKTSVAELFEIIEGHSC*WLELGL Trigger: CAAACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTC...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGGAGGGCCACAGCTGCTaGTGGCTGGAGCTCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKEGHSC*WLELGL Trigger: CAAACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTC...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCATTATTCCAGTTGAGACTCTACAGTGTGAACCTCCATCAAGGCTTACAGAGGACTACCATGATGTaGCCCACAATGCCCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FPLFQLRLYSVNLHQGLQRTTMM*PTMPSP Trigger: TGGACTGGGCATTGTGGGCAACATCATGGTAGTCCT...CTGTAAGCCTTGATGGAGGTTCACACTGTAGAGTCTCAACTGGAATAATGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
||
| CDS-3UTR CAA 90 bp | TTCCCATTATTCCAGTTGAGACTCTACAGTGTGAACCTCCATCAAGGCTTACAGTCTGTGGGCTTCTGCTaGCAATTGCAGAGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPLFQLRLYSVNLHQGLQSVGFC*QLQSFL Trigger: CAGGAAGCTCTGCAATTGCAAGCAGAAGCCCACAGA...CTGTAAGCCTTGATGGAGGTTCACACTGTAGAGTCTCAACTGGAATAATGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038856.14 |
||
| CDS-3UTR CAA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTATACTGTCGGTTATGTaGGGGAGGCCTGCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PYCTILYHFSTTMFLLTSILSVM*GRPAAT Trigger: GGTGGCTGCAGGCCTCCCCAACATAACCGACAGTAT...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATAATACTGTCGGTTATGTaGGGGAGGCCTGCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SQYVTCLKTSVAELFEIIILSVM*GRPAAT Trigger: GGTGGCTGCAGGCCTCCCCAACATAACCGACAGTAT...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGGGCTTCTGCTTGCAATaGCAGAGCTTCCTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QFKMFLKKFIFALVWQSKGFCLQ*QSFLKA Trigger: AGCCTTCAGGAAGCTCTGCAATTGCAAGCAGAAGCC...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGTCTGTGGGCTTCTGCTaGCAATTGCAGAGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QFKMFLKKFIFALVWQSKSVGFC*QLQSFL Trigger: CAGGAAGCTCTGCAATTGCAAGCAGAAGCCCACAGA...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTAGAAGCTAAGGAGTTTCACTGCTTATCAGTTTCACATTTAATACGGATGTCTGTGGGCTTCTGCTaGCAATTGCAGAGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLEAKEFHCLSVSHLIRMSVGFC*QLQSFL Trigger: CAGGAAGCTCTGCAATTGCAAGCAGAAGCCCACAGA...CATCCGTATTAAATGTGAAACTGATAAGCAGTGAAACTCCTTAGCTTCTAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGCAGTGGCCAGGATCATaGGCACAACATAAAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: TASQYVTCLKTSVAELFEQWPGS*AQHKRH Trigger: GTGTCTTTTATGTTGTGCCAATGATCCTGGCCACTG...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGTAATTTTTGTATATATCAAACCAAGAATGGCTTGTCCTCATGGCTAGGGCTGGAGAGAAATGAGTaGACAACCACAAGAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASNFCIYQTKNGLSSWLGLERNE*TTTRVL Trigger: CAGGACTCTTGTGGTTGTCAACTCATTTCTCTCCAG...CCCTAGCCATGAGGACAAGCCATTCTTGGTTTGATATATACAAAAATTACTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATAGGCTTCTGCTTGCAATaGCAGAGCTTCCTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQYVTCLKTSVAELFEIIGFCLQ*QSFLKA Trigger: AGCCTTCAGGAAGCTCTGCAATTGCAAGCAGAAGCC...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
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| CDS CCA 90 bp | CCTGAAGGCTGCACGAAATTTCTGAGACATGAGGTTGTAAATCACTaGGTTGATGGCACTGTTGAGATAAATGCAAATTCTGCAAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PEGCTKFLRHEVVNH*VDGTVEINANSAKE Trigger: CTCTTTTGCAGAATTTGCATTTATCTCAACAGTGCCATCAACCCAGTGATTTACAACCTCATGTCTCAGAAATTTCGTGCAGCCTTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGGAAGATACAGTGCTGTaGAAGCATCTGTTGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QFKMFLKKFIFALVWQSKEDTVL*KHLLVA Trigger: TGCCACCAACAGATGCTTCAACAGCACTGTATCTTC...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTGAAGATACAGTGCTGTaGAAGCATCTGTTGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PYCTILYHFSTTMFLLTSEDTVL*KHLLVA Trigger: TGCCACCAACAGATGCTTCAACAGCACTGTATCTTC...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTCAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGCTGGAGAGAAATGAGTaGACAACCACAAGAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QFKMFLKKFIFALVWQSKLERNE*TTTRVL Trigger: CAGGACTCTTGTGGTTGTCAACTCATTTCTCTCCAG...CTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTGAAGCATATATGTAGAGGCTCAGAACAAATTGATTTTCAGAATGTGTTCGGCTTCTGCTTGCAATaGCAGAGCTTCCTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLKHICRGSEQIDFQNVFGFCLQ*QSFLKA Trigger: AGCCTTCAGGAAGCTCTGCAATTGCAAGCAGAAGCC...GAACACATTCTGAAAATCAATTTGTTCTGAGCCTCTACATATATGCTTCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATACAGTGGCCAGGATCATaGGCACAACATAAAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: SQYVTCLKTSVAELFEIIQWPGS*AQHKRH Trigger: GTGTCTTTTATGTTGTGCCAATGATCCTGGCCACTG...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGGAAGATACAGTGCTGTaGAAGCATCTGTTGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKEDTVL*KHLLVA Trigger: TGCCACCAACAGATGCTTCAACAGCACTGTATCTTC...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGATCATACTGGAGAGAAATGAGTaGACAACCACAAGAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQYVTCLKTSVAELFEIILERNE*TTTRVL Trigger: CAGGACTCTTGTGGTTGTCAACTCATTTCTCTCCAG...TATGATCTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGCATCAAAGGACACTTTaGTGGTTGACACATACGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TASQYVTCLKTSVAELFEHQRTL*WLTHTY Trigger: ATACGTATGTGTCAACCACAAAAGTGTCCTTTGATG...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTTCCCAGTATGTAACTTGCCTGAAGACATCTGTTGCTGAATTATTTGAGCTGTTGAAGCATCTGTaGGTGGCATTTAAATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TASQYVTCLKTSVAELFELLKHL*VAFKFK Trigger: TTTGAATTTAAATGCCACCAACAGATGCTTCAACAG...CTCAAATAATTCAGCAACAGATGTCTTCAGGCAAGTTACATACTGGGAAGCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CCTTATTGTACCATCCTGTATCATTTCAGTACCACGATGTTCTTACTGACTTCTCTGTTGAAGCATCTGTaGGTGGCATTTAAATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PYCTILYHFSTTMFLLTSLLKHL*VAFKFK Trigger: TTTGAATTTAAATGCCACCAACAGATGCTTCAACAG...AGAAGTCAGTAAGAACATCGTGGTACTGAAATGATACAGGATGGTACAATAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAACCAGGTCTAATCTTAAAAGAACTTTCAAGCTTCCCTAACAGGTTGTTCCATCAAAGGACACTTTaGTGGTTGACACATACGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SKPGLILKELSSFPNRLFHQRTL*WLTHTY Trigger: ATACGTATGTGTCAACCACAAAAGTGTCCTTTGATG...GAACAACCTGTTAGGGAAGCTTGAAAGTTCTTTTAAGATTAGACCTGGTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038856.14 ENSMUST00000226626.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTTCTTGAAGAAGTTCATATTCGCTCTTGTTTGGCAGTCAAAGAAAAGCATCAAAGGACACTTTaGTGGTTGACACATACGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QDVLEEVHIRSCLAVKEKHQRTL*WLTHTY Trigger: ATACGTATGTGTCAACCACAAAAGTGTCCTTTGATG...CTTTTCTTTGACTGCCAAACAAGAGCGAATATGAACTTCTTCAAGAACATCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS GCA 72 bp | GTTGGGGAGGCCTGCAGCCACCAGAACCATGAGATCTaGCACAGCCAGACTTACCAGGTAACAGTTTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGEACSHQNHEI*HSQTYQVTVCR Trigger: CCTACAAACTGTTACCTGGTAAGTCTGGCTGTGGCAGATCTCATGGTTCTGGTGGCTGCAGGCCTCCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS CCA 72 bp | GGTAACCACCTGGTACTCGAGGGCCACAGCTGCTTGTaGCTGGAGCTCGGTTTGGTTCATTTCACTGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: GNHLVLEGHSCL*LELGLVHFTDS Trigger: ACTGTCAGTGAAATGAACCAAACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTCGAGTACCAGGTGGTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 ENSMUST00000227505.2 |
||
| CDS CCA 72 bp | ACCACCTGGTACTCGAGGGCCACAGCTGCTTGTGGCTaGAGCTCGGTTTGGTTCATTTCACTGACAGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: TTWYSRATAACG*SSVWFISLTVS Trigger: TGATACTGTCAGTGAAATGAACCAAACCGAGCTCCAGCCACAAGCAGCTGTGGCCCTCGAGTACCAGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 ENSMUST00000227505.2 |
||
| CDS GCA 72 bp | GGGCTTCTGCTTGCAATTGCAGAGCTTCCTGAAGGCTaGACGAAATTTCTGAGACATGAGGTTGTAAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLLLAIAELPEG*TKFLRHEVVNH Trigger: GTGATTTACAACCTCATGTCTCAGAAATTTCGTGCAGCCTTCAGGAAGCTCTGCAATTGCAAGCAGAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
||
| CDS CAA 72 bp | TGCTTTGTTCTCATGACCACCAGGACTACCATGATGTaGCCCACAATGCCCAGTCCACAAATAATGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: CFVLMTTRTTMM*PTMPSPQIMTT Trigger: TGTGGTCATTATTTGTGGACTGGGCATTGTGGGCAACATCATGGTAGTCCTGGTGGTCATGAGAACAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 ENSMUST00000227505.2 |
||
| CDS CAA 90 bp | GTTCTCATGTGCTTTGTTCTCATGACCACCAGGACTACCATGATGTaGCCCACAATGCCCAGTCCACAAATAATGACCACAAGTAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: VLMCFVLMTTRTTMM*PTMPSPQIMTTSKM Trigger: CATCTTACTTGTGGTCATTATTTGTGGACTGGGCATTGTGGGCAACATCATGGTAGTCCTGGTGGTCATGAGAACAAAGCACATGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 ENSMUST00000227505.2 |
||
| CDS CCA 72 bp | TGCACGAAATTTCTGAGACATGAGGTTGTAAATCACTaGGTTGATGGCACTGTTGAGATAAATGCAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: CTKFLRHEVVNH*VDGTVEINANS Trigger: AGAATTTGCATTTATCTCAACAGTGCCATCAACCCAGTGATTTACAACCTCATGTCTCAGAAATTTCGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038856.14 ENSMUST00000110289.4 ENSMUST00000226626.2 |
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