Pregenerated sensors for TRGV7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076744

Ensembl transcript IDs: ENSMUST00000103553.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	GAGGACCCCTCTAGCTTGGTGATTGACATTATTCTTTCTTCCAAGTaGGAGGATGTTTGTCTGCCAGCCGGCAAGAAAGCTAGAAGTAGG	+
Preference number: 6 (lower is better) Translates to: EDPSSLVIDIILSSK*EDVCLPAGKKARSR Trigger: CCTACTTCTAGCTTTCTTGCCGGCTGGCAGACAAACATCCTCCAACTTGGAAGAAAGAATAATGTCAATCACCAAGCTAGAGGGGTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103553.3
CDS GCA 72 bp	ACATTATTCTTTCTTCCAAGTTGGAGGATGTTTGTCTaGCAGCCGGCAAGAAAGCTAGAAGTAGGGCCAGAG	+
Preference number: 6 (lower is better) Translates to: TLFFLPSWRMFV*QPARKLEVGPE Trigger: CTCTGGCCCTACTTCTAGCTTTCTTGCCGGCTGGCAGACAAACATCCTCCAACTTGGAAGAAAGAATAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103553.3
CDS CAA 72 bp	TCTAGCTTGGTGATTGACATTATTCTTTCTTCCAAGTaGGAGGATGTTTGTCTGCCAGCCGGCAAGAAAGCT	+
Preference number: 6 (lower is better) Translates to: SSLVIDIILSSK*EDVCLPAGKKA Trigger: AGCTTTCTTGCCGGCTGGCAGACAAACATCCTCCAACTTGGAAGAAAGAATAATGTCAATCACCAAGCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103553.3

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