Pregenerated sensors for TRGV2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076754

Ensembl transcript IDs: ENSMUST00000103563.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATTTGCACATTCTCATCTGTCTCTCTGGTGACCGATAATTCAGTTTaGTCCAGCTGCCCAAGCCCAAAAACCCAGAGGCAGCAGGAGGTG	+
Preference number: 5 (lower is better) Translates to: ICTFSSVSLVTDNSV*SSCPSPKTQRQQEV Trigger: CACCTCCTGCTGCCTCTGGGTTTTTGGGCTTGGGCAGCTGGAGCAAACTGAATTATCGGTCACCAGAGAGACAGATGAGAATGTGCAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103563.3
CDS TCA 90 bp	GATAAACTATACAGGATATTTGCACATTCTCATCTGTCTCTCTGGTaGCCGATAATTCAGTTTGCTCCAGCTGCCCAAGCCCAAAAACCC	+
Preference number: 5 (lower is better) Translates to: DKLYRIFAHSHLSLW*PIIQFAPAAQAQKP Trigger: GGGTTTTTGGGCTTGGGCAGCTGGAGCAAACTGAATTATCGGTCACCAGAGAGACAGATGAGAATGTGCAAATATCCTGTATAGTTTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103563.3
CDS GCA 72 bp	TTCTCATCTGTCTCTCTGGTGACCGATAATTCAGTTTaGTCCAGCTGCCCAAGCCCAAAAACCCAGAGGCAG	+
Preference number: 6 (lower is better) Translates to: FSSVSLVTDNSV*SSCPSPKTQRQ Trigger: CTGCCTCTGGGTTTTTGGGCTTGGGCAGCTGGAGCAAACTGAATTATCGGTCACCAGAGAGACAGATGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103563.3

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