RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRGC4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076757

Ensembl transcript IDs: ENSMUST00000179181.3

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGACAGCAATCAAGCCCCGCTAGACCCTCAGCAGATATTGAGATaGAGGAAGGATGAAGATAGCAGGACTCTCCTGTTTCACCATCCA +
Preference number: 1 (lower is better)
Translates to: KDSNQAPLDPQQILR*RKDEDSRTLLFHHP
Trigger: TGGATGGTGAAACAGGAGAGTCCTGCTATCTTCATCCTTCCTGCATCTCAATATCTGCTGAGGGTCTAGCGGGGCTTGATTGCTGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR-3UTR GCA 90 bp CCTGTGATGCTGGGATCTGCTAGAGGGGCTGAGAGAGGATGGGTTAGGATGGCTGATCAGTTTCCACTCTaGTGTGAGAACTATAGTAAT +
Preference number: 2 (lower is better)
Translates to: PVMLGSARGAERGWVRMADQFPL*CENYSN
Trigger: ATTACTATAGTTCTCACAGCAGAGTGGAAACTGATC...AGCCATCCTAACCCATCCTCTCTCAGCCCCTCTAGCAGATCCCAGCATCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR-3UTR CCA 90 bp GTTCAAATAAAGTTATTTAGGGCATATGAAGTGGAGGCTCTGGGGGAATTATCTGGGGCTGAGAGAGGATaGGTTAGGATGGCTGGATGC +
Preference number: 2 (lower is better)
Translates to: VQIKLFRAYEVEALGELSGAERG*VRMAGC
Trigger: GCATCCAGCCATCCTAACCCATCCTCTCTCAGCCCC...AGATAATTCCCCCAGAGCCTCCACTTCATATGCCCTAAATAACTTTATTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR-3UTR CCA 90 bp GTTCAAATAAAGTTATTTAGGGCATATGAAGTGGAGGCTCTGGGGGAATTATCTGCAGTTTGTGTGCATTaGGCCTGTGATGCTGGGATC +
Preference number: 2 (lower is better)
Translates to: VQIKLFRAYEVEALGELSAVCVH*ACDAGI
Trigger: GATCCCAGCATCACAGGCCCAATGCACACAAACTGC...AGATAATTCCCCCAGAGCCTCCACTTCATATGCCCTAAATAACTTTATTTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR-3UTR GCA 90 bp GGTCTGTTGAAGAGTAAAGTTGATCAGTTTCCACTCTGCTGTGAGAACTATAGTATGATACAAAAATCATaGATATGTGTCCTCGAGGAG +
Preference number: 2 (lower is better)
Translates to: GLLKSKVDQFPLCCENYSMIQKS*ICVLEE
Trigger: CTCCTCGAGGACACATATGCATGATTTTTGTATCAT...ACTATAGTTCTCACAGCAGAGTGGAAACTGATCAACTTTACTCTTCAACAGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR-3UTR GCA 90 bp CAGTTTCCACTCTGCTGTGAGAACTATAGTAATGATACAAAAATCATGCATATGCAGCAGATATTGAGATaGAGGAAGGATGAAGATAGC +
Preference number: 2 (lower is better)
Translates to: QFPLCCENYSNDTKIMHMQQILR*RKDEDS
Trigger: GCTATCTTCATCCTTCCTGCATCTCAATATCTGCTG...CATATGCATGATTTTTGTATCATTACTATAGTTCTCACAGCAGAGTGGAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR TCA 72 bp GTGCCTAGGAGCAGCAGTTTGTGTGCATTGGGCCTGTaGTGCTGGGATCTGCTAGAGGGGCTGAGAGAGGAT +
Preference number: 3 (lower is better)
Translates to: VPRSSSLCALGL*CWDLLEGLRED
Trigger: ATCCTCTCTCAGCCCCTCTAGCAGATCCCAGCATCACAGGCCCAATGCACACAAACTGCTGCTCCTAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR CCA 72 bp GTGATGCTGGGATCTGCTAGAGGGGCTGAGAGAGGATaGGTTAGGATGGCTGGATGCTTGGAAGCTACGGTC +
Preference number: 3 (lower is better)
Translates to: VMLGSARGAERG*VRMAGCLEATV
Trigger: GACCGTAGCTTCCAAGCATCCAGCCATCCTAACCCATCCTCTCTCAGCCCCTCTAGCAGATCCCAGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR GCA 72 bp TGGGGGAATTATCTGGTTCTAGGGTATGAAATGGGGTaGCTAGGAGCAGCAGTTTGTGTGCATTGGGCCTGT +
Preference number: 3 (lower is better)
Translates to: WGNYLVLGYEMG*LGAAVCVHWAC
Trigger: ACAGGCCCAATGCACACAAACTGCTGCTCCTAGGCACCCCATTTCATACCCTAGAACCAGATAATTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR TCA 72 bp GTTAGGATGGCTGGATGCTTGGAAGCTACGGTCTGTTaGAGAGTAAAGTTGATCAGTTTCCACTCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: VRMAGCLEATVC*RVKLISFHSAV
Trigger: CACAGCAGAGTGGAAACTGATCAACTTTACTCTTCAACAGACCGTAGCTTCCAAGCATCCAGCCATCCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR-3UTR CAA 90 bp CAGTTTCCACTCTGCTGTGAGAACTATAGTAATGATACAAAAATCATGCATATGGACCCTCAGCAGATATaGAGATGCAGGAAGGATGAA +
Preference number: 3 (lower is better)
Translates to: QFPLCCENYSNDTKIMHMDPQQI*RCRKDE
Trigger: TTCATCCTTCCTGCATCTCAATATCTGCTGAGGGTC...CATATGCATGATTTTTGTATCATTACTATAGTTCTCACAGCAGAGTGGAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR GCA 72 bp TCTGCTGTGAGAACTATAGTAATGATACAAAAATCATaGATATGTGTCCTCGAGGAGGTCAAAGACAGCAAT +
Preference number: 3 (lower is better)
Translates to: SAVRTIVMIQKS*ICVLEEVKDSN
Trigger: ATTGCTGTCTTTGACCTCCTCGAGGACACATATGCATGATTTTTGTATCATTACTATAGTTCTCACAGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR GCA 72 bp GGTCTGTTGAAGAGTAAAGTTGATCAGTTTCCACTCTaGTGTGAGAACTATAGTAATGATACAAAAATCATG +
Preference number: 3 (lower is better)
Translates to: GLLKSKVDQFPL*CENYSNDTKIM
Trigger: CATGATTTTTGTATCATTACTATAGTTCTCACAGCAGAGTGGAAACTGATCAACTTTACTCTTCAACAGACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
3UTR CAA 72 bp GACAGCAATCAAGCCCCGCTAGACCCTCAGCAGATATaGAGATGCAGGAAGGATGAAGATAGCAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: DSNQAPLDPQQI*RCRKDEDSRTL
Trigger: GAGAGTCCTGCTATCTTCATCCTTCCTGCATCTCAATATCTGCTGAGGGTCTAGCGGGGCTTGATTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS-3UTR TCA 90 bp AGACAGCAATCAAGCCCCGCTAGACCCTCAGCAGATATTGAGATGCAGGAAGGAATGTTCTTTAGCCATTaGATCTTCAGTCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: RQQSSPARPSADIEMQEGMFFSH*IFSHRQ
Trigger: CTGACGGTGACTGAAGATTCAATGGCTAAAGAACAT...TCCTTCCTGCATCTCAATATCTGCTGAGGGTCTAGCGGGGCTTGATTGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS-3UTR CCA 90 bp TATCTGGTTCTAGGGTATGAAATGGGGTGCCTAGGAGCAGCAGTTTGTGTGCATACAACGAAGGCCAAGTaGACCATGCTCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: YLVLGYEMGCLGAAVCVHTTKAK*TMLLKN
Trigger: GTTCTTCAAGAGCATGGTCCACTTGGCCTTCGTTGT...ATGCACACAAACTGCTGCTCCTAGGCACCCCATTTCATACCCTAGAACCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS-3UTR TCA 90 bp TATTTAGGGCATATGAAGTGGAGGCTCTGGGGGAATTATCTGGTTCTAGGGTATATGCATAGGTGGTGGTaGCCTGAAGCTGCAACATAT +
Preference number: 4 (lower is better)
Translates to: YLGHMKWRLWGNYLVLGYMHRWW*PEAATY
Trigger: ATATGTTGCAGCTTCAGGTCACCACCACCTATGCAT...ATACCCTAGAACCAGATAATTCCCCCAGAGCCTCCACTTCATATGCCCTAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS-3UTR TCA 90 bp CAGTTTCCACTCTGCTGTGAGAACTATAGTAATGATACAAAAATCATGCATATGACATGGCTGCTCTTCTaGATAGACAGAATACAACGA +
Preference number: 4 (lower is better)
Translates to: QFPLCCENYSNDTKIMHMTWLLF*IDRIQR
Trigger: TCGTTGTATTCTGTCTATTCAGAAGAGCAGCCATGT...CATATGCATGATTTTTGTATCATTACTATAGTTCTCACAGCAGAGTGGAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS-3UTR CAA 90 bp GATCTGCTAGAGGGGCTGAGAGAGGATGGGTTAGGATGGCTGGATGCTTGGAAGCAGCCTTATGGAGATTaGTTTCAGCAGCAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: DLLEGLREDGLGWLDAWKQPYGD*FQQQKE
Trigger: TTCCTTCTGCTGCTGAAACAAATCTCCATAAGGCTG...CTTCCAAGCATCCAGCCATCCTAACCCATCCTCTCTCAGCCCCTCTAGCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS-3UTR CAA 90 bp TGGGATCTGCTAGAGGGGCTGAGAGAGGATGGGTTAGGATGGCTGGATGCTTGGTGGTCAACTCCTCTTTaGTTGTTTTCGTGTTTGACA +
Preference number: 5 (lower is better)
Translates to: WDLLEGLREDGLGWLDAWWSTPL*LFSCLT
Trigger: TGTCAAACACGAAAACAACAAAAGAGGAGTTGACCA...CCAAGCATCCAGCCATCCTAACCCATCCTCTCTCAGCCCCTCTAGCAGATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS-3UTR CAA 90 bp GTTCAAATAAAGTTATTTAGGGCATATGAAGTGGAGGCTCTGGGGGAATTATCTTCCAGATCAGTAGCATaGTTAACATTTTCATGCCGC +
Preference number: 5 (lower is better)
Translates to: VQIKLFRAYEVEALGELSSRSVA*LTFSCR
Trigger: GCGGCATGAAAATGTTAACAATGCTACTGATCTGGA...AGATAATTCCCCCAGAGCCTCCACTTCATATGCCCTAAATAACTTTATTTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS-3UTR CAA 90 bp CACTCTGCTGTGAGAACTATAGTAATGATACAAAAATCATGCATATGTGTCCTCAGGAAAATAGTAGGCTaGGGAGAAAAGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: HSAVRTIVMIQKSCICVLRKIVG*GEKSES
Trigger: TGACTCAGACTTTTCTCCCAAGCCTACTATTTTCCT...GAGGACACATATGCATGATTTTTGTATCATTACTATAGTTCTCACAGCAGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS CCA 90 bp TTAATAGTTGTGAAAGCTTTACCTATGGGAGGAAACAGAATCTCTTaGTCAACTCCTCTTTTGTTGTTTTCGTGTTTGACAATGCAACTA +
Preference number: 5 (lower is better)
Translates to: LIVVKALPMGGNRIS*STPLLLFSCLTMQL
Trigger: TAGTTGCATTGTCAAACACGAAAACAACAAAAGAGGAGTTGACCAAGAGATTCTGTTTCCTCCCATAGGTAAAGCTTTCACAACTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS GCA 72 bp CATGCTCTTGAAGAACAGGATGAGGTAGGTGTAGAATaGATAGGTGGTGGTGACCTGAAGCTGCAACATATC +
Preference number: 6 (lower is better)
Translates to: HALEEQDEVGVE*IGGGDLKLQHI
Trigger: GATATGTTGCAGCTTCAGGTCACCACCACCTATGCATTCTACACCTACCTCATCCTGTTCTTCAAGAGCATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS TCA 72 bp ATGAACGTTGATCATCACAGGACATGGCTGCTCTTCTaGATAGACAGAATACAACGAAGGCCAAGTGGACCA +
Preference number: 6 (lower is better)
Translates to: MNVDHHRTWLLF*IDRIQRRPSGP
Trigger: TGGTCCACTTGGCCTTCGTTGTATTCTGTCTATTCAGAAGAGCAGCCATGTCCTGTGATGATCAACGTTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS CCA 72 bp GTGAAAGCTTTACCTATGGGAGGAAACAGAATCTCTTaGTCAACTCCTCTTTTGTTGTTTTCGTGTTTGACA +
Preference number: 6 (lower is better)
Translates to: VKALPMGGNRIS*STPLLLFSCLT
Trigger: TGTCAAACACGAAAACAACAAAAGAGGAGTTGACCAAGAGATTCTGTTTCCTCCCATAGGTAAAGCTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS CAA 72 bp TGTGAAAGCTTTACCTATGGGAGGAAACAGAATCTCTaGGTCAACTCCTCTTTTGTTGTTTTCGTGTTTGAC +
Preference number: 6 (lower is better)
Translates to: CESFTYGRKQNL*VNSSFVVFVFD
Trigger: GTCAAACACGAAAACAACAAAAGAGGAGTTGACCAAGAGATTCTGTTTCCTCCCATAGGTAAAGCTTTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS CAA 90 bp GGAAACAGAATCTCTTGGTCAACTCCTCTTTTGTTGTTTTCGTGTTaGACAATGCAACTATGTTCTTTAGCCATTGAATCTTCAGTCACC +
Preference number: 6 (lower is better)
Translates to: GNRISWSTPLLLFSC*TMQLCSLAIESSVT
Trigger: GGTGACTGAAGATTCAATGGCTAAAGAACATAGTTGCATTGTCAAACACGAAAACAACAAAAGAGGAGTTGACCAAGAGATTCTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS CAA 72 bp ATGGGAGGAAACAGAATCTCTTGGTCAACTCCTCTTTaGTTGTTTTCGTGTTTGACAATGCAACTATGTTCT +
Preference number: 6 (lower is better)
Translates to: MGGNRISWSTPL*LFSCLTMQLCS
Trigger: AGAACATAGTTGCATTGTCAAACACGAAAACAACAAAAGAGGAGTTGACCAAGAGATTCTGTTTCCTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS CAA 72 bp GGAGGAAACAGAATCTCTTGGTCAACTCCTCTTTTGTaGTTTTCGTGTTTGACAATGCAACTATGTTCTTTA +
Preference number: 6 (lower is better)
Translates to: GGNRISWSTPLL*FSCLTMQLCSL
Trigger: TAAAGAACATAGTTGCATTGTCAAACACGAAAACAACAAAAGAGGAGTTGACCAAGAGATTCTGTTTCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS CAA 90 bp ATTAATAGTTGTGAAAGCTTTACCTATGGGAGGAAACAGAATCTCTaGGTCAACTCCTCTTTTGTTGTTTTCGTGTTTGACAATGCAACT +
Preference number: 6 (lower is better)
Translates to: INSCESFTYGRKQNL*VNSSFVVFVFDNAT
Trigger: AGTTGCATTGTCAAACACGAAAACAACAAAAGAGGAGTTGACCAAGAGATTCTGTTTCCTCCCATAGGTAAAGCTTTCACAACTATTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3
CDS CAA 72 bp ATCTCTTGGTCAACTCCTCTTTTGTTGTTTTCGTGTTaGACAATGCAACTATGTTCTTTAGCCATTGAATCT +
Preference number: 6 (lower is better)
Translates to: ISWSTPLLLFSC*TMQLCSLAIES
Trigger: AGATTCAATGGCTAAAGAACATAGTTGCATTGTCAAACACGAAAACAACAAAAGAGGAGTTGACCAAGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179181.3