Pregenerated sensors for TRF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032554Ensembl transcript IDs: ENSMUST00000035158.16, ENSMUST00000112645.8, ENSMUST00000126359.2, ENSMUST00000164377.2, ENSMUST00000165296.8, ENSMUST00000168142.8, ENSMUST00000170904.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCACAGCCACGGCATAATACCCTTTAGGAAAGATACCTTGTTGTaGTGGGATGGCACAATTAGAGCTCTCGTAGTACTCTGCCATGAC | + |
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Preference number: 1 (lower is better) Translates to: HHSHGIIPFRKDTLL*WDGTIRALVVLCHD Trigger: GTCATGGCAGAGTACTACGAGAGCTCTAATTGTGCCATCCCATCACAACAAGGTATCTTTCCTAAAGGGTATTATGCCGTGGCTGTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| 3UTR TCA 90 bp | AGGTCACAGAGGGTGGAATTCTTCTCATACCCGGGAGCGCAGCCTTaGCTGAAAAATTCATCGAATTTGCAGTGGTTGATCCTGTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: RSQRVEFFSYPGAQP*LKNSSNLQWLILLY Trigger: GTACAACAGGATCAACCACTGCAAATTCGATGAATTTTTCAGTCAAGGCTGCGCTCCCGGGTATGAGAAGAATTCCACCCTCTGTGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTGGGATTAAAGGCATaGACCACCACCGCCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: NSLRRPGWPRTQKSTCLCLGLKA*TTTASW Trigger: CCAAGAGGCGGTGGTGGTGCATGCCTTTAATCCCAG...GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| 3UTR CAA 90 bp | CAGGTCACAGAGGGTGGAATTCTTCTCATACCCGGGAGCGCAGCCTaGACTGAAAAATTCATCGAATTTGCAGTGGTTGATCCTGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: QVTEGGILLIPGSAA*TEKFIEFAVVDPVV Trigger: TACAACAGGATCAACCACTGCAAATTCGATGAATTTTTCAGTCAAGGCTGCGCTCCCGGGTATGAGAAGAATTCCACCCTCTGTGACCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| 3UTR-3UTR TCA 90 bp | GCACATTTGAGTGGGCCAATACACAGGTCACAGAGGGTGGAATTCTTCTCATACAAAGATACCTTGTTGTaGTGGGATGGCACAATTAGA | + |
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Preference number: 2 (lower is better) Translates to: AHLSGPIHRSQRVEFFSYKDTLL*WDGTIR Trigger: TCTAATTGTGCCATCCCATCACAACAAGGTATCTTT...GTATGAGAAGAATTCCACCCTCTGTGACCTGTGTATTGGCCCACTCAAATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| 3UTR CCA 72 bp | CCAACCCCTCAGGGCATGAAGACCAAGAGAAGCCCATaGGCCACGGGAGGGAGCATCTGTCTCCACCACAGT | + |
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Preference number: 3 (lower is better) Translates to: PTPQGMKTKRSP*ATGGSICLHHS Trigger: ACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGCTTCTCTTGGTCTTCATGCCCTGAGGGGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| 3UTR GCA 72 bp | GCCTTTCAGGTTGTTCCAGGTGATGCTAGTGTCCGATaGCTTCACCACAGCCACGGCATAATACCCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: AFQVVPGDASVR*LHHSHGIIPFR Trigger: CCTAAAGGGTATTATGCCGTGGCTGTGGTGAAGGCATCGGACACTAGCATCACCTGGAACAACCTGAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| 3UTR TCA 72 bp | AGGGTGGAATTCTTCTCATACCCGGGAGCGCAGCCTTaGCTGAAAAATTCATCGAATTTGCAGTGGTTGATC | + |
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Preference number: 3 (lower is better) Translates to: RVEFFSYPGAQP*LKNSSNLQWLI Trigger: GATCAACCACTGCAAATTCGATGAATTTTTCAGTCAAGGCTGCGCTCCCGGGTATGAGAAGAATTCCACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| 3UTR TCA 72 bp | CACGGCATAATACCCTTTAGGAAAGATACCTTGTTGTaGTGGGATGGCACAATTAGAGCTCTCGTAGTACTC | + |
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Preference number: 3 (lower is better) Translates to: HGIIPFRKDTLL*WDGTIRALVVL Trigger: GAGTACTACGAGAGCTCTAATTGTGCCATCCCATCACAACAAGGTATCTTTCCTAAAGGGTATTATGCCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| 3UTR CCA 72 bp | ATTATATTCCTCTTTGTTGTTCGGAGCACATTTGAGTaGGCCAATACACAGGTCACAGAGGGTGGAATTCTT | + |
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Preference number: 3 (lower is better) Translates to: IIFLFVVRSTFE*ANTQVTEGGIL Trigger: AAGAATTCCACCCTCTGTGACCTGTGTATTGGCCCACTCAAATGTGCTCCGAACAACAAAGAGGAATATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| 3UTR GCA 72 bp | TTGGGAAATATAAAGTCAGCAGTCGTTTTTATTTTGTaGTCTGTGTATGTGGTAAGGCACAGCAGCGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: LGNIKSAVVFIL*SVYVVRHSSED Trigger: GTCTTCGCTGCTGTGCCTTACCACATACACAGAGCACAAAATAAAAACGACTGCTGACTTTATATTTCCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGCTTTCACAGGCTTCCTaGTGCCATCAGGGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTQKSTCLCLPSAGLSQAS*CHQGRA Trigger: TGCTCTGCCCTGATGGCACCAGGAAGCCTGTGAAAG...CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | CCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCGCAAGCCAATGGGGATaGCCCAGCCTGCAGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGTHSVDQAGLELRNPPAASQWG*PSLQTF Trigger: GAAGGTCTGCAGGCTGGGTCATCCCCATTGGCTTGC...GGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | GCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCATATGGTTGTGTGCTTaGCAAAGGCCACATCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: AHGPREGASVSTTVATHLIWLCA*QRPHPH Trigger: GTGGGGATGTGGCCTTTGTCAAGCACACAACCATAT...GAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | GCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCCCTTGGTGGTGGACTTaGACAAACAGAAATTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: AHGPREGASVSTTVATHLPWWWT*TNRNCR Trigger: CCGGCAATTTCTGTTTGTTCAAGTCCACCACCAAGG...GAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | CTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGGGGCCAGGTGGCAGCTaGCAAAATCTTTCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LRRPGWPRTQKSTCLCLPGPGGS*QNLSQA Trigger: AGCCTGTGAAAGATTTTGCCAGCTGCCACCTGGCCC...CGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | AACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCAGCCTGGGCACAGTTaGCACAGTTTGGGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLRRPGWPRTQKSTCLCQPGHS*HSLGKA Trigger: GGCCTTCCCCAAACTGTGTCAACTGTGCCCAGGCTG...GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | GCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTCCCAAGAGGAGAGCTaGACAGTTGGAAGTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHGPREGASVSTTVATHLSQEES*TVGSLL Trigger: CAAAAGACTTCCAACTGTTCAGCTCTCCTCTTGGGA...GAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR GCA 90 bp | GCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCAGCATCGGCTTCACTTaGAGAAATGGCCTTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHGPREGASVSTTVATHLSIGFT*RNGLDA Trigger: TGCATCAAGGCCATTTCTGCAAGTGAAGCCGATGCT...GAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR GCA 90 bp | CGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTTCACAGGCTTCCTGGTaGCATCAGGGCAGAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: RRPGWPRTQKSTCLCLPSSQASW*HQGRAT Trigger: AGTTGCTCTGCCCTGATGGCACCAGGAAGCCTGTGA...ACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | GCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTCTTGCCTTCGAGCTaGTTCAGCTGGAAGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: AHGPREGASVSTTVATHLFLPSS*FSWKSV Trigger: AACAGACTTCCAGCTGAACCAGCTCGAAGGCAAGAA...GAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | ATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGCAAAGAATGGTTGAGTaGAGGAGCAGCCACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: MGHGREHLSPPQWQPTSWQRMVE*RSSHSL Trigger: CAGGCTGTGGCTGCTCCTCCACTCAACCATTCTTTG...CCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | AGCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCAGAGCAGTTCATATTaGTCCCTGTCAGCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SPWATGGSICLHHSGNPPQSSSY*SLSAFS Trigger: GGAGAAGGCTGACAGGGACCAATATGAACTGCTCTG...AGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | ATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGCTCCATCCAAAGTCATaGCGTCCGCTTCTCCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: MGHGREHLSPPQWQPTSWLHPKS*RPLLRS Trigger: TGAACGGAGAAGCGGACGCCATGACTTTGGATGGAG...CCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | CTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGCTCCATCCAAAGTCATaGCGTCCGCTTCTCCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LRRPGWPRTQKSTCLCLPLHPKS*RPLLRS Trigger: TGAACGGAGAAGCGGACGCCATGACTTTGGATGGAG...CGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | AGCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTACAGGTCACAGAGGGTaGAATTCTTCTCATACCCGG | + |
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Preference number: 4 (lower is better) Translates to: SPWATGGSICLHHSGNPPTGHRG*NSSHTR Trigger: CCGGGTATGAGAAGAATTCCACCCTCTGTGACCTGT...AGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | AGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGAGCTTGGGCCAGGTaGCAGCTGGCAAAATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: RPGWPRTQKSTCLCLPSAGAWAR*QLAKSF Trigger: GAAAGATTTTGCCAGCTGCCACCTGGCCCAAGCTCC...AGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | GTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGGCAAGCCAATGGGGATaGCCCAGCCTGCAGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: VCGKAQQRRLHQLAPTPQASQWG*PSLQTF Trigger: GAAGGTCTGCAGGCTGGGTCATCCCCATTGGCTTGC...CTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | ATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGATTTGGTGTCATCCCTaGACAGAAGGTCCTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: MGHGREHLSPPQWQPTSWIWCHP*TEGPWW Trigger: CCACCAAGGACCTTCTGTTCAGGGATGACACCAAAT...CCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGCTCATACTGATCCACTaGCTTGCGGGTATTGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTQKSTCLCLPSAGLILIH*LAGIVK Trigger: CTTGACAATACCCGCAAGCCAGTGGATCAGTATGAG...CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | GGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGATCGGAGCACATTTGAGTaGGCCAATACACAGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: GPREGASVSTTVATHLLDRSTFE*ANTQVT Trigger: TGTGACCTGTGTATTGGCCCACTCAAATGTGCTCCG...ATCCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | TGTGTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGCCTGGGCACAGTTaGCACAGTTTGGGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CVCGKAQQRRLHQLAPTPQPGHS*HSLGKA Trigger: GGCCTTCCCCAAACTGTGTCAACTGTGCCCAGGCTG...AGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | GCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCCAGTTGGAAGTCTTTTaGTTTGCCTTTGCCAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: AHGPREGASVSTTVATHLQLEVF*FAFAKV Trigger: CACTTTGGCAAAGGCAAATCAAAAGACTTCCAACTG...GAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | ATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGCGAATTTGCAGTGGTTaGTCCTGTTGTACAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: MGHGREHLSPPQWQPTSWRICSG*SCCTAC Trigger: GCATGCTGTACAACAGGATCAACCACTGCAAATTCG...CCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | AGCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTGAGCGCAGCCTTGACTaGAAAATTCATCGAATTTGC | + |
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Preference number: 4 (lower is better) Translates to: SPWATGGSICLHHSGNPPERSLD*KIHRIC Trigger: GCAAATTCGATGAATTTTTCAGTCAAGGCTGCGCTC...AGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | GTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCCTTGGTGGTGGACTTaGACAAACAGAAATTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASRVPWWWT*TNRNCR Trigger: CCGGCAATTTCTGTTTGTTCAAGTCCACCACCAAGG...CACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | GTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGATTTGGTGTCATCCCTaGACAGAAGGTCCTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASRVIWCHP*TEGPWW Trigger: CCACCAAGGACCTTCTGTTCAGGGATGACACCAAAT...CACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR GCA 90 bp | GCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCAACTCGAAGTCTTCCTaGTTCAGATTCTTAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: AHGPREGASVSTTVATHLNSKSS*FRFLAH Trigger: ATGGGCTAAGAATCTGAAGCAGGAAGACTTCGAGTT...GAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | GCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCGGAGAGCTGAACAGTTaGAAGTCTTTTGATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: AHGPREGASVSTTVATHLGELNS*KSFDLP Trigger: AGGCAAATCAAAAGACTTCCAACTGTTCAGCTCTCC...GAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | AAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGGGCATGAAGCGTAGTACTCTGCCATaGCAGGCACTAGACCACACT | + |
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Preference number: 4 (lower is better) Translates to: KAQQRRLHQLAPTPQGMKRSTLP*QALDHT Trigger: AGTGTGGTCTAGTGCCTGTCATGGCAGAGTACTACG...CTTCATGCCCTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | TGCCCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTCGTAGTACTCTGCCATaGCAGGCACTAGACCACACT | + |
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Preference number: 4 (lower is better) Translates to: CPGTHSVDQAGLELRNPPRSTLP*QALDHT Trigger: AGTGTGGTCTAGTGCCTGTCATGGCAGAGTACTACG...AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR GCA 90 bp | CGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTAGCATCGGCTTCACTTaGAGAAATGGCCTTGATGCA | + |
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Preference number: 4 (lower is better) Translates to: RRPGWPRTQKSTCLCLPSSIGFT*RNGLDA Trigger: TGCATCAAGGCCATTTCTGCAAGTGAAGCCGATGCT...ACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | GTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGGGGCCAGGTGGCAGCTaGCAAAATCTTTCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VCGKAQQRRLHQLAPTPQGPGGS*QNLSQA Trigger: AGCCTGTGAAAGATTTTGCCAGCTGCCACCTGGCCC...CTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | GTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGGGAGCTTGGGCCAGGTaGCAGCTGGCAAAATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VCGKAQQRRLHQLAPTPQGAWAR*QLAKSF Trigger: GAAAGATTTTGCCAGCTGCCACCTGGCCCAAGCTCC...CTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR TCA 90 bp | CCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCGATTCCGAATGGCAGTaGCATAGTTATGGCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: PGTHSVDQAGLELRNPPADSEWQ*HSYGQG Trigger: ACCTTGGCCATAACTATGTCACTGCCATTCGGAATC...GGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGAAAGATACCTTGTTGTaGTGGGATGGCACAATTAGA | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTQKSTCLCLPSAGKDTLL*WDGTIR Trigger: TCTAATTGTGCCATCCCATCACAACAAGGTATCTTT...CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | CTGCCCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCCGAATTTGCAGTGGTTaGTCCTGTTGTACAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPWNSLRRPGWPRTQKSTRICSG*SCCTAC Trigger: GCATGCTGTACAACAGGATCAACCACTGCAAATTCG...GGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | CGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGAGCGCAGCCTTGACTaGAAAATTCATCGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRPGWPRTQKSTCLCLPSERSLD*KIHRIC Trigger: GCAAATTCGATGAATTTTTCAGTCAAGGCTGCGCTC...ACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTACTGATCCACTGGCTTaGGGGTATTGTCAAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPGTHSVDQAGLELRNPPTDPLA*GYCQGR Trigger: TCTGCCTTGACAATACCCGCAAGCCAGTGGATCAGT...AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR CCA 90 bp | ACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCGAGCTGGTTCAGCTaGAAGTCTGTTCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: THSVDQAGLELRNPPASASSWFS*KSVPFF Trigger: AAAGAAGGGAACAGACTTCCAGCTGAACCAGCTCGA...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | ACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTTCTTGCCTTCGAGCTaGTTCAGCTGGAAGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: THSVDQAGLELRNPPASAFLPSS*FSWKSV Trigger: AACAGACTTCCAGCTGAACCAGCTCGAAGGCAAGAA...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR CCA 90 bp | AACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCAGAGCAGTTCATATTaGTCCCTGTCAGCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLRRPGWPRTQKSTCLCQSSSY*SLSAFS Trigger: GGAGAAGGCTGACAGGGACCAATATGAACTGCTCTG...GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR CCA 90 bp | AACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCTCCACTCGTCACACTTaGTTCTCTCCAGGTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLRRPGWPRTQKSTCLCSTRHT*FSPGDS Trigger: TGAGTCACCTGGAGAGAACCAAGTGTGACGAGTGGA...GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | AACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCACAGGTCACAGAGGGTaGAATTCTTCTCATACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLRRPGWPRTQKSTCLCTGHRG*NSSHTR Trigger: CCGGGTATGAGAAGAATTCCACCCTCTGTGACCTGT...GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | AACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCGGAGCACATTTGAGTaGGCCAATACACAGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSLRRPGWPRTQKSTCLCRSTFE*ANTQVT Trigger: TGTGACCTGTGTATTGGCCCACTCAAATGTGCTCCG...GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGATTTATCCAGGACAGTCTaGTGTTTCACAAAGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: GPREGASVSTTVATHLLDLSRTV*CFTKAT Trigger: TGTAGCCTTTGTGAAACACCAGACTGTCCTGGATAA...ATCCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
||
| CDS-3UTR TCA 90 bp | TGCCCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTTCCCAAGAGGAGAGCTaGACAGTTGGAAGTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPGTHSVDQAGLELRNPPSQEES*TVGSLL Trigger: CAAAAGACTTCCAACTGTTCAGCTCTCCTCTTGGGA...AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGGGCATGAAGGATTCCGAATGGCAGTaGCATAGTTATGGCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KAQQRRLHQLAPTPQGMKDSEWQ*HSYGQG Trigger: ACCTTGGCCATAACTATGTCACTGCCATTCGGAATC...CTTCATGCCCTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
||
| CDS-3UTR GCA 90 bp | GTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGACTGATCCACTGGCTTaGGGGTATTGTCAAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCGKAQQRRLHQLAPTPQTDPLA*GYCQGR Trigger: TCTGCCTTGACAATACCCGCAAGCCAGTGGATCAGT...CTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR GCA 90 bp | AGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTAACTCGAAGTCTTCCTaGTTCAGATTCTTAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPGWPRTQKSTCLCLPSANSKSS*FRFLAH Trigger: ATGGGCTAAGAATCTGAAGCAGGAAGACTTCGAGTT...AGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCCAGTTGGAAGTCTTTTaGTTTGCCTTTGCCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGTHSVDQAGLELRNPPAQLEVF*FAFAKV Trigger: CACTTTGGCAAAGGCAAATCAAAAGACTTCCAACTG...GGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | GTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGTCGAGCTGGTTCAGCTaGAAGTCTGTTCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCGKAQQRRLHQLAPTPQSSWFS*KSVPFF Trigger: AAAGAAGGGAACAGACTTCCAGCTGAACCAGCTCGA...CTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
||
| CDS-3UTR CCA 90 bp | CCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTTATCCAGGACAGTCTaGTGTTTCACAAAGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: PGTHSVDQAGLELRNPPALSRTV*CFTKAT Trigger: TGTAGCCTTTGTGAAACACCAGACTGTCCTGGATAA...GGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | TTTGTGCTCTGTGTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCTTTCACAGGCTTCCTaGTGCCATCAGGGCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLCVCGKAQQRRLHQLALSQAS*CHQGRA Trigger: TGCTCTGCCCTGATGGCACCAGGAAGCCTGTGAAAG...GGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATACACAGAGCACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | CCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCCCAAATAAAGTCTCCTaGCTAGTCAGTACAGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PGTHSVDQAGLELRNPPAPNKVS*LVSTAL Trigger: TAAGGCTGTACTGACTAGCCAGGAGACTTTATTTGG...GGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR TCA 90 bp | GGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGGGCATGAAAGATACCTTGTTGTaGTGGGATGGCACAATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKAQQRRLHQLAPTPQGMKDTLL*WDGTIR Trigger: TCTAATTGTGCCATCCCATCACAACAAGGTATCTTT...CATGCCCTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | GTGCTCTGTGTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCACTCATACTGATCCACTaGCTTGCGGGTATTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLCVCGKAQQRRLHQLAPLILIH*LAGIVK Trigger: CTTGACAATACCCGCAAGCCAGTGGATCAGTATGAG...TGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATACACAGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | TGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCGGAGAGCTGAACAGTTaGAAGTCTTTTGATTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WNSLRRPGWPRTQKSTCLGELNS*KSFDLP Trigger: AGGCAAATCAAAAGACTTCCAACTGTTCAGCTCTCC...GAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CCA 90 bp | TTTGTGCTCTGTGTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCTCCACTCGTCACACTTaGTTCTCTCCAGGTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLCVCGKAQQRRLHQLASTRHT*FSPGDS Trigger: TGAGTCACCTGGAGAGAACCAAGTGTGACGAGTGGA...GGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATACACAGAGCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR GCA 90 bp | TGTGTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTTCACAATCTTTTCAATaGAGTCCTCAGTGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCGKAQQRRLHQLAPTPSQSFQ*SPQWSL Trigger: CAGAGACCACTGAGGACTGCATTGAAAAGATTGTGA...AGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CCA 90 bp | TTTGTGCTCTGTGTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAAATAAAGTCTCCTaGCTAGTCAGTACAGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FVLCVCGKAQQRRLHQLAPNKVS*LVSTAL Trigger: TAAGGCTGTACTGACTAGCCAGGAGACTTTATTTGG...GGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATACACAGAGCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| 3UTR CAA 72 bp | GAGGGTGGAATTCTTCTCATACCCGGGAGCGCAGCCTaGACTGAAAAATTCATCGAATTTGCAGTGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EGGILLIPGSAA*TEKFIEFAVVD Trigger: ATCAACCACTGCAAATTCGATGAATTTTTCAGTCAAGGCTGCGCTCCCGGGTATGAGAAGAATTCCACCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| CDS-3UTR GCA 90 bp | GGAAATATAAAGTCAGCAGTCGTTTTTATTTTGTGCTCTGTGTATGTGGTAAGGTCACAGGCTTCCTGGTaGCATCAGGGCAGAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GNIKSAVVFILCSVYVVRSQASW*HQGRAT Trigger: AGTTGCTCTGCCCTGATGGCACCAGGAAGCCTGTGA...CCTTACCACATACACAGAGCACAAAATAAAAACGACTGCTGACTTTATATTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| 3UTR CAA 72 bp | AGTTTGGGAAATATAAAGTCAGCAGTCGTTTTTATTTaGTGCTCTGTGTATGTGGTAAGGCACAGCAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLGNIKSAVVFI*CSVYVVRHSSE Trigger: TTCGCTGCTGTGCCTTACCACATACACAGAGCACAAAATAAAAACGACTGCTGACTTTATATTTCCCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CAA 90 bp | AGCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTAACATGGTTTGGAGCTaGGGCCAGGTGGCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPWATGGSICLHHSGNPPNMVWS*GQVAAG Trigger: GCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTT...AGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CAA 90 bp | CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGAACATGGTTTGGAGCTaGGGCCAGGTGGCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGWPRTQKSTCLCLPSAGNMVWS*GQVAAG Trigger: GCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTT...CCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CAA 90 bp | GGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGATAGACCACAACATGGTTaGGAGCTTGGGCCAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPREGASVSTTVATHLLDRPQHG*ELGPGG Trigger: GCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCT...ATCCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS CCA 90 bp | GTCACACTTGGTTCTCTCCAGGTGACTCAGTGCACACCACTTCACTaGCGAGTTGTCGATCGAGCCCTCCGGGCACACGCCTTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTLGSLQVTQCTPLH*RVVDRALRAHAFLL Trigger: CAGCAGGAAGGCGTGTGCCCGGAGGGCTCGATCGACAACTCGCCAGTGAAGTGGTGTGCACTGAGTCACCTGGAGAGAACCAAGTGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS-3UTR CAA 90 bp | AGCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTGTAGCCAAAGAATGGTaGAGTGGAGGAGCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPWATGGSICLHHSGNPPVAKEW*SGGAAT Trigger: TGTGGCTGCTCCTCCACTCAACCATTCTTTGGCTAC...AGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
||
| CDS-3UTR CAA 90 bp | GGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGATGCAGAGCAGTTCATATaGGTCCCTGTCAGCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPREGASVSTTVATHLLDAEQFI*VPVSLL Trigger: GAGAAGGCTGACAGGGACCAATATGAACTGCTCTGC...ATCCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
||
| CDS TCA 90 bp | CTGGCTAGTCAGTACAGCCTTAACCCGGGCTGCCTTCTCTTTTCGTaGGACCACAACATGGTTTGGAGCTTGGGCCAGGTGGCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LASQYSLNPGCLLFS*DHNMVWSLGQVAAG Trigger: GCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCTCACGAAAAGAGAAGGCAGCCCGGGTTAAGGCTGTACTGACTAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS GCA 90 bp | GATGATGCTCCACTCGTCACACTTGGTTCTCTCCAGGTGACTCAGTaGACACCACTTCACTGGCGAGTTGTCGATCGAGCCCTCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DDAPLVTLGSLQVTQ*TPLHWRVVDRALRA Trigger: TGCCCGGAGGGCTCGATCGACAACTCGCCAGTGAAGTGGTGTGCACTGAGTCACCTGGAGAGAACCAAGTGTGACGAGTGGAGCATCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000170904.2 |
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| CDS-3UTR CAA 90 bp | AGCCCATGGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTAATATGGTTGTGTGCTaGACAAAGGCCACATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPWATGGSICLHHSGNPPNMVVC*TKATSP Trigger: TGGGGATGTGGCCTTTGTCAAGCACACAACCATATT...AGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCCATGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS-3UTR CAA 90 bp | TGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCAGACCACAACATGGTTaGGAGCTTGGGCCAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WNSLRRPGWPRTQKSTCLRPQHG*ELGPGG Trigger: GCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCT...GAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS GCA 90 bp | GACACAGTTTGGGGAAGGCCACTGGATCTGCACAGGGGACACAACTaGCCGAGAAGAAACTGGACACAGCTTTCTCAAGAGGACTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: DTVWGRPLDLHRGHN*PRRNWTQLSQEDCG Trigger: CCCGCAGTCCTCTTGAGAAAGCTGTGTCCAGTTTCTTCTCGGGCAGTTGTGTCCCCTGTGCAGATCCAGTGGCCTTCCCCAAACTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS CCA 90 bp | GCCTACGTAGCCAAAGAATGGTTGAGTGGAGGAGCAGCCACAGCCTaGGCACAGTTGACACAGTTTGGGGAAGGCCACTGGATCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AYVAKEWLSGGAATA*AQLTQFGEGHWICT Trigger: TGTGCAGATCCAGTGGCCTTCCCCAAACTGTGTCAACTGTGCCCAGGCTGTGGCTGCTCCTCCACTCAACCATTCTTTGGCTACGTAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCCACCATTTGACCGTTTaGTCAGGGACAGCCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: LPWNSLRRPGWPRTQKSTHHLTV*SGTARH Trigger: GTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTG...GGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR CAA 90 bp | ACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCGCAGAGCAGTTCATATaGGTCCCTGTCAGCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: THSVDQAGLELRNPPASAAEQFI*VPVSLL Trigger: GAGAAGGCTGACAGGGACCAATATGAACTGCTCTGC...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR CAA 90 bp | GGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGGGCATGCAGTGGTTGATCCTGTaGTACAGCATGCCCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKAQQRRLHQLAPTPQGMQWLIL*YSMPIG Trigger: CCCTATGGGCATGCTGTACAACAGGATCAACCACTG...CATGCCCTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
||
| CDS-3UTR CAA 90 bp | CCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCCAGTGGTTGATCCTGTaGTACAGCATGCCCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGTHSVDQAGLELRNPPAQWLIL*YSMPIG Trigger: CCCTATGGGCATGCTGTACAACAGGATCAACCACTG...GGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS GCA 90 bp | ACAGCCTGGGCACAGTTGACACAGTTTGGGGAAGGCCACTGGATCTaGACAGGGGACACAACTGCCCGAGAAGAAACTGGACACAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TAWAQLTQFGEGHWI*TGDTTAREETGHSF Trigger: AAAGCTGTGTCCAGTTTCTTCTCGGGCAGTTGTGTCCCCTGTGCAGATCCAGTGGCCTTCCCCAAACTGTGTCAACTGTGCCCAGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
||
| CDS CCA 90 bp | CGGGCTGCCTTCTCTTTTCGTGAGACCACAACATGGTTTGGAGCTTaGGCCAGGTGGCAGCTGGCAAAATCTTTCACAGGCTTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAAFSFRETTTWFGA*ARWQLAKSFTGFLV Trigger: CACCAGGAAGCCTGTGAAAGATTTTGCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCTCACGAAAAGAGAAGGCAGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS-3UTR CAA 90 bp | TGCCCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGTAGCCAAAGAATGGTaGAGTGGAGGAGCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CPGTHSVDQAGLELRNPPVAKEW*SGGAAT Trigger: TGTGGCTGCTCCTCCACTCAACCATTCTTTGGCTAC...AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR CAA 90 bp | GTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGTCCTTGGTGGTGGACTaGAACAAACAGAAATTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VDQAGLELRNPPASASRVSLVVD*NKQKLP Trigger: CGGCAATTTCTGTTTGTTCAAGTCCACCACCAAGGA...CACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS TCA 90 bp | ATGCCTTCACCACAGCCACGGCATAATACCCGTAGTACTCTGCCATaGCAGGCACTAGACCACACTGGCCTGCAATGTAGGCATGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MPSPQPRHNTRSTLP*QALDHTGLQCRHVL Trigger: GAGGACATGCCTACATTGCAGGCCAGTGTGGTCTAGTGCCTGTCATGGCAGAGTACTACGGGTATTATGCCGTGGCTGTGGTGAAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170904.2 |
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| CDS GCA 90 bp | ACAGGCTTCCTGGTGCCATCAGGGCAGAGCAACTCGAAGTCTTCCTaGTTCAGATTCTTAGCCCATTCGGCAGGGTTCTTTCCTTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGFLVPSGQSNSKSS*FRFLAHSAGFFPSV Trigger: CACCGAAGGAAAGAACCCTGCCGAATGGGCTAAGAATCTGAAGCAGGAAGACTTCGAGTTGCTCTGCCCTGATGGCACCAGGAAGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS-3UTR CAA 90 bp | GTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCAACCCCTCAGCACCATTTGACCGTTTaGTCAGGGACAGCCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: VCGKAQQRRLHQLAPTPQHHLTV*SGTARH Trigger: GTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTG...CTGAGGGGTTGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
||
| CDS-3UTR CAA 90 bp | CTGCCCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGTTCCTGTGCCACTTaGAGAATCTCCCAGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPWNSLRRPGWPRTQKSTCSCAT*RISQIK Trigger: CTTGATCTGGGAGATTCTCAAAGTGGCACAGGAACA...GGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS TCA 90 bp | CTTTACCACAGCCACAGCGTAGTAGTAGGTCTGTGGATGTTCCACTaGTCCATAAAACTCCGCCGCCACGGGCTTCAGGTTGTTCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LYHSHSVVVGLWMFH*SIKLRRHGLQVVRS Trigger: ACTCCGAACAACCTGAAGCCCGTGGCGGCGGAGTTTTATGGATCAGTGGAACATCCACAGACCTACTACTACGCTGTGGCTGTGGTAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 ENSMUST00000165296.8 |
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| CDS GCA 90 bp | ACGGTCTTCATGTGGTCACGGAAGCTGATGCACTTGGTATTCTCGTaGTCTGACACTGCGCACCATTTGACCGTTTTGTCAGGGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TVFMWSRKLMHLVFS*SDTAHHLTVLSGTA Trigger: GGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGTGCATCAGCTTCCGTGACCACATGAAGACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 ENSMUST00000164377.2 ENSMUST00000165296.8 |
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| CDS GCA 90 bp | CTTGACAAAGGCCACATCCCCACCGCCATCTTTCAGACACTTGAATaGGCCTACGTAGCCAAAGAATGGTTGAGTGGAGGAGCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LDKGHIPTAIFQTLE*AYVAKEWLSGGAAT Trigger: TGTGGCTGCTCCTCCACTCAACCATTCTTTGGCTACGTAGGCGCATTCAAGTGTCTGAAAGATGGCGGTGGGGATGTGGCCTTTGTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS CCA 90 bp | ACAGCCTTAACCCGGGCTGCCTTCTCTTTTCGTGAGACCACAACATaGTTTGGAGCTTGGGCCAGGTGGCAGCTGGCAAAATCTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TALTRAAFSFRETTT*FGAWARWQLAKSFT Trigger: TGTGAAAGATTTTGCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCTCACGAAAAGAGAAGGCAGCCCGGGTTAAGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
||
| CDS-3UTR CAA 90 bp | AACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCAATATGGTTGTGTGCTaGACAAAGGCCACATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSLRRPGWPRTQKSTCLCNMVVC*TKATSP Trigger: TGGGGATGTGGCCTTTGTCAAGCACACAACCATATT...GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCACGGGAGGGAGCATCTGTCTCCACCACAGTGGCAACCCACCTCTTGGATAGTTTAACGAAACATTaGGTGTCATCCCTGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPREGASVSTTVATHLLDSLTKH*VSSLNR Trigger: TCTGTTCAGGGATGACACCAAATGTTTCGTTAAACT...ATCCAAGAGGTGGGTTGCCACTGTGGTGGAGACAGATGCTCCCTCCCGTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS TCA 90 bp | CTTCATGTGGTCACGGAAGCTGATGCACTTGGTATTCTCGTGCTCTaGCACTGCGCACCATTTGACCGTTTTGTCAGGGACAGCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LHVVTEADALGILVL*HCAPFDRFVRDSQT Trigger: TGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGTGCATCAGCTTCCGTGACCACATGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 ENSMUST00000164377.2 ENSMUST00000165296.8 |
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| CDS-3UTR CAA 90 bp | CGGAGCACATTTGAGTGGGCCAATACACAGGTCACAGAGGGTGGAATTCTTCTCCACCATTTGACCGTTTaGTCAGGGACAGCCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RSTFEWANTQVTEGGILLHHLTV*SGTARH Trigger: GTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTG...GAGAAGAATTCCACCCTCTGTGACCTGTGTATTGGCCCACTCAAATGTGCTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164377.2 |
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| CDS TCA 90 bp | AGTGTCCGATGCCTTCACCACAGCCACGGCATAATACCCTTGTTGTaGTGGGATGGCACAATTAGAGCTCTCGTAGTACTCTGCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVRCLHHSHGIIPLL*WDGTIRALVVLCHD Trigger: GTCATGGCAGAGTACTACGAGAGCTCTAATTGTGCCATCCCATCACAACAAGGGTATTATGCCGTGGCTGTGGTGAAGGCATCGGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168142.8 |
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| CDS CCA 90 bp | GCCCATTCGGCAGGGTTCTTTCCTTCGGTGTTATCCAGGACAGTCTaGTGTTTCACAAAGGCTACATCTCCTTTCTCAACGAGACACCTG | + |
|
Preference number: 5 (lower is better) Translates to: AHSAGFFPSVLSRTV*CFTKATSPFSTRHL Trigger: CAGGTGTCTCGTTGAGAAAGGAGATGTAGCCTTTGTGAAACACCAGACTGTCCTGGATAACACCGAAGGAAAGAACCCTGCCGAATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS-3UTR CAA 90 bp | GTGCTCTGTGTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCCCATGTTCCTGTGCCACTTaGAGAATCTCCCAGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLCVCGKAQQRRLHQLAPCSCAT*RISQIK Trigger: CTTGATCTGGGAGATTCTCAAAGTGGCACAGGAACA...TGGGGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATACACAGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS GCA 90 bp | ATCGTACACCCAACCCCCATCCAAGGTCATAGCATCGGCTTCACTTaGAGAAATGGCCTTGATGCAATCCGGATAGGAGGTTTTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: IVHPTPIQGHSIGFT*RNGLDAIRIGGFLH Trigger: GTGAAGAAAACCTCCTATCCGGATTGCATCAAGGCCATTTCTGCAAGTGAAGCCGATGCTATGACCTTGGATGGGGGTTGGGTGTACGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 ENSMUST00000165296.8 |
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| CDS-3UTR CAA 90 bp | TGCCCTGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTACAGTTGGAAGTCTTTaGATTTGCCTTTGCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CPGTHSVDQAGLELRNPPTVGSL*ICLCQS Trigger: ACTTTGGCAAAGGCAAATCAAAAGACTTCCAACTGT...AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS-3UTR CAA 90 bp | TGGAACTCACTCCGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCAGTTTAACGAAACATTaGGTGTCATCCCTGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: WNSLRRPGWPRTQKSTCLSLTKH*VSSLNR Trigger: TCTGTTCAGGGATGACACCAAATGTTTCGTTAAACT...GAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACGGAGTGAGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112645.8 |
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| CDS GCA 90 bp | CATCCAAAGTCATGGCGTCCGCTTCTCCGTTCACAATCTTTTCAATaGAGTCCTCAGTGGTCTCTGCTGACTCACACTCTATCTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPKSWRPLLRSQSFQ*SPQWSLLTHTLSFP Trigger: AGGGAAAGATAGAGTGTGAGTCAGCAGAGACCACTGAGGACTGCATTGAAAAGATTGTGAACGGAGAAGCGGACGCCATGACTTTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000170904.2 |
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| CDS GCA 90 bp | TCCAGGAGTCGTGAGGTTGAGCACTTCCTCATGTTACCGACAGATTaGATGTACTCCGCTCCTAAGTATTTTTCAGGTGTGGTACCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSREVEHFLMLPTD*MYSAPKYFSGVVPS Trigger: AGAGGGTACCACACCTGAAAAATACTTAGGAGCGGAGTACATGCAATCTGTCGGTAACATGAGGAAGTGCTCAACCTCACGACTCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS-3UTR CAA 90 bp | TTTGTGCTCTGTGTATGTGGTAAGGCACAGCAGCGAAGACTACACCAGTTAGCCTCCTTGGTGGTGGACTaGAACAAACAGAAATTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FVLCVCGKAQQRRLHQLASLVVD*NKQKLP Trigger: CGGCAATTTCTGTTTGTTCAAGTCCACCACCAAGGA...GGCTAACTGGTGTAGTCTTCGCTGCTGTGCCTTACCACATACACAGAGCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS TCA 90 bp | CAGCAGGTCTTTCCCAAGAGGAGAGCTGAACAGTTGGAAGTCTTTTaGTTTGCCTTTGCCAAAGTGTTCCTGTGCCACTTTGAGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QQVFPKRRAEQLEVF*FAFAKVFLCHFENL Trigger: GAGATTCTCAAAGTGGCACAGGAACACTTTGGCAAAGGCAAATCAAAAGACTTCCAACTGTTCAGCTCTCCTCTTGGGAAAGACCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS-3UTR CAA 90 bp | GGAAATATAAAGTCAGCAGTCGTTTTTATTTTGTGCTCTGTGTATGTGGTAAGGACAGTTGGAAGTCTTTaGATTTGCCTTTGCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GNIKSAVVFILCSVYVVRTVGSL*ICLCQS Trigger: ACTTTGGCAAAGGCAAATCAAAAGACTTCCAACTGT...CCTTACCACATACACAGAGCACAAAATAAAAACGACTGCTGACTTTATATTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035158.16 |
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| CDS CAA 90 bp | AAGCTGATGCACTTGGTATTCTCGTGCTCTGACACTGCGCACCATTaGACCGTTTTGTCAGGGACAGCCAGACACAGCCCCAGGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: KLMHLVFSCSDTAHH*TVLSGTARHSPRAA Trigger: CGCTGCCCTGGGGCTGTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGTGCATCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000164377.2 ENSMUST00000165296.8 |
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| CDS GCA 72 bp | CCACTCGTCACACTTGGTTCTCTCCAGGTGACTCAGTaGACACCACTTCACTGGCGAGTTGTCGATCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLVTLGSLQVTQ*TPLHWRVVDRA Trigger: GGCTCGATCGACAACTCGCCAGTGAAGTGGTGTGCACTGAGTCACCTGGAGAGAACCAAGTGTGACGAGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000170904.2 |
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| CDS CCA 72 bp | ACCCGGGCTGCCTTCTCTTTTCGTGAGACCACAACATaGTTTGGAGCTTGGGCCAGGTGGCAGCTGGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TRAAFSFRETTT*FGAWARWQLAK Trigger: TTTTGCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCTCACGAAAAGAGAAGGCAGCCCGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS TCA 72 bp | CCGGGCACACGCCTTCCTGCTGATTCCGAATGGCAGTaGCATAGTTATGGCCAAGGTACAGCCTGTAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGTRLPADSEWQ*HSYGQGTACSP Trigger: TGGACTACAGGCTGTACCTTGGCCATAACTATGTCACTGCCATTCGGAATCAGCAGGAAGGCGTGTGCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS TCA 72 bp | CCACAGCCACGGCATAATACCCGTAGTACTCTGCCATaGCAGGCACTAGACCACACTGGCCTGCAATGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQPRHNTRSTLP*QALDHTGLQCR Trigger: CCTACATTGCAGGCCAGTGTGGTCTAGTGCCTGTCATGGCAGAGTACTACGGGTATTATGCCGTGGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170904.2 |
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| CDS GCA 72 bp | TGGGGAAGGCCACTGGATCTGCACAGGGGACACAACTaGCCGAGAAGAAACTGGACACAGCTTTCTCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WGRPLDLHRGHN*PRRNWTQLSQE Trigger: CTCTTGAGAAAGCTGTGTCCAGTTTCTTCTCGGGCAGTTGTGTCCCCTGTGCAGATCCAGTGGCCTTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS GCA 72 bp | GGTGGCAGCTGGCAAAATCTTTCACAGGCTTCCTGGTaGCATCAGGGCAGAGCAACTCGAAGTCTTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGSWQNLSQASW*HQGRATRSLPA Trigger: AGCAGGAAGACTTCGAGTTGCTCTGCCCTGATGGCACCAGGAAGCCTGTGAAAGATTTTGCCAGCTGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS CCA 72 bp | CGTGAGACCACAACATGGTTTGGAGCTTGGGCCAGGTaGCAGCTGGCAAAATCTTTCACAGGCTTCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RETTTWFGAWAR*QLAKSFTGFLV Trigger: CACCAGGAAGCCTGTGAAAGATTTTGCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCTCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS CAA 72 bp | CACTTGGTATTCTCGTGCTCTGACACTGCGCACCATTaGACCGTTTTGTCAGGGACAGCCAGACACAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: HLVFSCSDTAHH*TVLSGTARHSP Trigger: GGGGCTGTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000164377.2 ENSMUST00000165296.8 |
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| CDS TCA 72 bp | ACTTGGTATTCTCGTGCTCTGACACTGCGCACCATTTaGCCGTTTTGTCAGGGACAGCCAGACACAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TWYSRALTLRTI*PFCQGQPDTAP Trigger: TGGGGCTGTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000164377.2 ENSMUST00000165296.8 |
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| CDS TCA 72 bp | AGCCACAGCGTAGTAGTAGGTCTGTGGATGTTCCACTaGTCCATAAAACTCCGCCGCCACGGGCTTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SHSVVVGLWMFH*SIKLRRHGLQV Trigger: AACCTGAAGCCCGTGGCGGCGGAGTTTTATGGATCAGTGGAACATCCACAGACCTACTACTACGCTGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 ENSMUST00000165296.8 |
||
| CDS TCA 72 bp | ACTTGGTATTCTCGTGCTCTGACACTGCGCACCATTTaGCCGTTTTGTCAGGGACAGCCAGACACAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TWYSRALTLRTI*PFCQGQPDTAL Trigger: CAGGGCTGTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126359.2 |
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| CDS GCA 72 bp | CCGAGAAGAAACTGGACACAGCTTTCTCAAGAGGACTaGGGGGCTCCGACAGCTTACAGAAGAGCAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PRRNWTQLSQED*GAPTAYRRASQ Trigger: TTGGCTTGCTCTTCTGTAAGCTGTCGGAGCCCCGCAGTCCTCTTGAGAAAGCTGTGTCCAGTTTCTTCTCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS GCA 72 bp | GGCCACATCCCCACCGCCATCTTTCAGACACTTGAATaGGCCTACGTAGCCAAAGAATGGTTGAGTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GHIPTAIFQTLE*AYVAKEWLSGG Trigger: TCCTCCACTCAACCATTCTTTGGCTACGTAGGCGCATTCAAGTGTCTGAAAGATGGCGGTGGGGATGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS CAA 72 bp | GGGCTGCCTTCTCTTTTCGTGAGACCACAACATGGTTaGGAGCTTGGGCCAGGTGGCAGCTGGCAAAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: GLPSLFVRPQHG*ELGPGGSWQNL Trigger: AAGATTTTGCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCTCACGAAAAGAGAAGGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS CAA 72 bp | TTCTCGTGCTCTGACACTGCGCACCATTTGACCGTTTaGTCAGGGACAGCCAGACACAGCCCTGCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FSCSDTAHHLTV*SGTARHSPALL Trigger: AAGAAGAGCAGGGCTGTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126359.2 |
||
| CDS CAA 72 bp | CACTTGGTATTCTCGTGCTCTGACACTGCGCACCATTaGACCGTTTTGTCAGGGACAGCCAGACACAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLVFSCSDTAHH*TVLSGTARHSP Trigger: AGGGCTGTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126359.2 |
||
| CDS CAA 90 bp | CACTTGGTATTCTCGTGCTCTGACACTGCGCACCATTTGACCGTTTaGTCAGGGACAGCCAGACACAGCCCTGCTCTTCTTTTGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLVFSCSDTAHHLTV*SGTARHSPALLLPW Trigger: CCAAGGCAAAAGAAGAGCAGGGCTGTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126359.2 |
||
| CDS TCA 72 bp | CCTTCTCCGGCAAGACCTCAAATATGGTTGTGTGCTTaGCAAAGGCCACATCCCCACCGCCATCTTTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSPARPQIWLCA*QRPHPHRHLSD Trigger: GTCTGAAAGATGGCGGTGGGGATGTGGCCTTTGTCAAGCACACAACCATATTTGAGGTCTTGCCGGAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS GCA 72 bp | CCAACCCCCATCCAAGGTCATAGCATCGGCTTCACTTaGAGAAATGGCCTTGATGCAATCCGGATAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PTPIQGHSIGFT*RNGLDAIRIGG Trigger: ACCTCCTATCCGGATTGCATCAAGGCCATTTCTGCAAGTGAAGCCGATGCTATGACCTTGGATGGGGGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 ENSMUST00000165296.8 |
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| CDS GCA 72 bp | CTGGTGCCATCAGGGCAGAGCAACTCGAAGTCTTCCTaGTTCAGATTCTTAGCCCATTCGGCAGGGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LVPSGQSNSKSS*FRFLAHSAGFF Trigger: AAAGAACCCTGCCGAATGGGCTAAGAATCTGAAGCAGGAAGACTTCGAGTTGCTCTGCCCTGATGGCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS GCA 72 bp | GCCTTTCAGGTTGTTCCAGGTGATGCTAGTGTCCGATaGCTTCACCACAGCCACGGCATAATACCCGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: AFQVVPGDASVR*LHHSHGIIPVV Trigger: TACTACGGGTATTATGCCGTGGCTGTGGTGAAGGCATCGGACACTAGCATCACCTGGAACAACCTGAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170904.2 |
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| CDS GCA 72 bp | GCCTTTCAGGTTGTTCCAGGTGATGCTAGTGTCCGATaGCTTCACCACAGCCACGGCATAATACCCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: AFQVVPGDASVR*LHHSHGIIPLL Trigger: CAACAAGGGTATTATGCCGTGGCTGTGGTGAAGGCATCGGACACTAGCATCACCTGGAACAACCTGAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168142.8 |
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| CDS CCA 72 bp | GGCTTGCGGGTATTGTCAAGGCAGAGCAGTTCATATTaGTCCCTGTCAGCCTTCTCCGGCAAGACCTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: GLRVLSRQSSSY*SLSAFSGKTSN Trigger: ATTTGAGGTCTTGCCGGAGAAGGCTGACAGGGACCAATATGAACTGCTCTGCCTTGACAATACCCGCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS CAA 72 bp | GCCTTCTCCGGCAAGACCTCAAATATGGTTGTGTGCTaGACAAAGGCCACATCCCCACCGCCATCTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: AFSGKTSNMVVC*TKATSPPPSFR Trigger: TCTGAAAGATGGCGGTGGGGATGTGGCCTTTGTCAAGCACACAACCATATTTGAGGTCTTGCCGGAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS CAA 90 bp | GCCATCTTTCAGACACTTGAATGCGCCTACGTAGCCAAAGAATGGTaGAGTGGAGGAGCAGCCACAGCCTGGGCACAGTTGACACAGTTT | + |
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Preference number: 6 (lower is better) Translates to: AIFQTLECAYVAKEW*SGGAATAWAQLTQF Trigger: AAACTGTGTCAACTGTGCCCAGGCTGTGGCTGCTCCTCCACTCAACCATTCTTTGGCTACGTAGGCGCATTCAAGTGTCTGAAAGATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS CAA 90 bp | AAGCTGATGCACTTGGTATTCTCGTGCTCTGACACTGCGCACCATTaGACCGTTTTGTCAGGGACAGCCAGACACAGCCCTGCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KLMHLVFSCSDTAHH*TVLSGTARHSPALL Trigger: AAGAAGAGCAGGGCTGTGTCTGGCTGTCCCTGACAAAACGGTCAAATGGTGCGCAGTGTCAGAGCACGAGAATACCAAGTGCATCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126359.2 |
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| CDS CAA 90 bp | TCCCTGTCAGCCTTCTCCGGCAAGACCTCAAATATGGTTGTGTGCTaGACAAAGGCCACATCCCCACCGCCATCTTTCAGACACTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SLSAFSGKTSNMVVC*TKATSPPPSFRHLN Trigger: ATTCAAGTGTCTGAAAGATGGCGGTGGGGATGTGGCCTTTGTCAAGCACACAACCATATTTGAGGTCTTGCCGGAGAAGGCTGACAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000126359.2 |
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| CDS CCA 72 bp | TTCTCTTTTCGTGAGACCACAACATGGTTTGGAGCTTaGGCCAGGTGGCAGCTGGCAAAATCTTTCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: FSFRETTTWFGA*ARWQLAKSFTG Trigger: GCCTGTGAAAGATTTTGCCAGCTGCCACCTGGCCCAAGCTCCAAACCATGTTGTGGTCTCACGAAAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS CAA 90 bp | TCCCTGAACAGAAGGTCCTTGGTGGTGGACTTGAACAAACAGAAATaGCCGGTGCAGTCACTTCCCCCAAATAAAGTCTCCTGGCTAGTC | + |
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Preference number: 6 (lower is better) Translates to: SLNRRSLVVDLNKQK*PVQSLPPNKVSWLV Trigger: GACTAGCCAGGAGACTTTATTTGGGGGAAGTGACTGCACCGGCAATTTCTGTTTGTTCAAGTCCACCACCAAGGACCTTCTGTTCAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 |
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| CDS TCA 72 bp | TGCCTTCACCACAGCCACGGCATAATACCCTTGTTGTaGTGGGATGGCACAATTAGAGCTCTCGTAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: CLHHSHGIIPLL*WDGTIRALVVL Trigger: GAGTACTACGAGAGCTCTAATTGTGCCATCCCATCACAACAAGGGTATTATGCCGTGGCTGTGGTGAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168142.8 |
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| CDS GCA 72 bp | GAGCCAGGTAGCAATCCTCATACTGATCCACTGGCTTaGGGGTATTGTCAAGGCAGAGCAGTTCATATTGGT | + |
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Preference number: 6 (lower is better) Translates to: EPGSNPHTDPLA*GYCQGRAVHIG Trigger: ACCAATATGAACTGCTCTGCCTTGACAATACCCGCAAGCCAGTGGATCAGTATGAGGATTGCTACCTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS CAA 72 bp | GTTTGTGGAAAGTGCAGGCTTCCAGGAGTCGTGAGGTaGAGCACTTCCTCATGTTACCGACAGATTGCATGT | + |
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Preference number: 6 (lower is better) Translates to: VCGKCRLPGVVR*STSSCYRQIAC Trigger: ACATGCAATCTGTCGGTAACATGAGGAAGTGCTCAACCTCACGACTCCTGGAAGCCTGCACTTTCCACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS CAA 72 bp | CCAAGAGGAGAGCTGAACAGTTGGAAGTCTTTTGATTaGCCTTCGAGCTGGTTCAGCTGGAAGTCTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PRGELNSWKSFD*PSSWFSWKSVP Trigger: GGGAACAGACTTCCAGCTGAACCAGCTCGAAGGCAAATCAAAAGACTTCCAACTGTTCAGCTCTCCTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165296.8 |
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| CDS CCA 72 bp | GCAGGGTTCTTTCCTTCGGTGTTATCCAGGACAGTCTaGTGTTTCACAAAGGCTACATCTCCTTTCTCAACG | + |
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Preference number: 6 (lower is better) Translates to: AGFFPSVLSRTV*CFTKATSPFST Trigger: CGTTGAGAAAGGAGATGTAGCCTTTGTGAAACACCAGACTGTCCTGGATAACACCGAAGGAAAGAACCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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| CDS CAA 72 bp | AGAAGGTCCTTGGTGGTGGACTTGAACAAACAGAAATaGCCGGTGCAGTCACTTCCCCCAAATAAAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RRSLVVDLNKQK*PVQSLPPNKVS Trigger: GGAGACTTTATTTGGGGGAAGTGACTGCACCGGCAATTTCTGTTTGTTCAAGTCCACCACCAAGGACCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 |
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| CDS CAA 90 bp | AGGTCTTTCCCAAGAGGAGAGCTGAACAGTTGGAAGTCTTTTGATTaGCCTTCGAGCTGGTTCAGCTGGAAGTCTGTTCCCTTCTTTACC | + |
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Preference number: 6 (lower is better) Translates to: RSFPRGELNSWKSFD*PSSWFSWKSVPFFT Trigger: GGTAAAGAAGGGAACAGACTTCCAGCTGAACCAGCTCGAAGGCAAATCAAAAGACTTCCAACTGTTCAGCTCTCCTCTTGGGAAAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165296.8 |
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| CDS CAA 90 bp | AGGTCTTTCCCAAGAGGAGAGCTGAACAGTTGGAAGTCTTTTGATTaGCCTTTGCCAAAGTGTTCCTGTGCCACTTTGAGAATCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RSFPRGELNSWKSFD*PLPKCSCATLRISQ Trigger: CTGGGAGATTCTCAAAGTGGCACAGGAACACTTTGGCAAAGGCAAATCAAAAGACTTCCAACTGTTCAGCTCTCCTCTTGGGAAAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS GCA 72 bp | CGTGAGGTTGAGCACTTCCTCATGTTACCGACAGATTaGATGTACTCCGCTCCTAAGTATTTTTCAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: REVEHFLMLPTD*MYSAPKYFSGV Trigger: CACACCTGAAAAATACTTAGGAGCGGAGTACATGCAATCTGTCGGTAACATGAGGAAGTGCTCAACCTCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS CAA 72 bp | ACGAAACATTTGGTGTCATCCCTGAACAGAAGGTCCTaGGTGGTGGACTTGAACAAACAGAAATTGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: TKHLVSSLNRRS*VVDLNKQKLPV Trigger: CACCGGCAATTTCTGTTTGTTCAAGTCCACCACCAAGGACCTTCTGTTCAGGGATGACACCAAATGTTTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 |
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| CDS CAA 90 bp | GGAAGTTTAACGAAACATTTGGTGTCATCCCTGAACAGAAGGTCCTaGGTGGTGGACTTGAACAAACAGAAATTGCCGGTGCAGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: GSLTKHLVSSLNRRS*VVDLNKQKLPVQSL Trigger: AAGTGACTGCACCGGCAATTTCTGTTTGTTCAAGTCCACCACCAAGGACCTTCTGTTCAGGGATGACACCAAATGTTTCGTTAAACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 |
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| CDS CAA 72 bp | CCAAGAGGAGAGCTGAACAGTTGGAAGTCTTTTGATTaGCCTTTGCCAAAGTGTTCCTGTGCCACTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PRGELNSWKSFD*PLPKCSCATLR Trigger: TCTCAAAGTGGCACAGGAACACTTTGGCAAAGGCAAATCAAAAGACTTCCAACTGTTCAGCTCTCCTCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 |
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| CDS TCA 72 bp | TCACAAAGGCTACATCTCCTTTCTCAACGAGACACCTaGAAGCCCCTGTGTAACCATTATATTCCTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SQRLHLLSQRDT*KPLCNHYIPLC Trigger: ACAAAGAGGAATATAATGGTTACACAGGGGCTTTCAGGTGTCTCGTTGAGAAAGGAGATGTAGCCTTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035158.16 ENSMUST00000112645.8 ENSMUST00000168142.8 ENSMUST00000170904.2 |
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