Pregenerated sensors for TREML2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071068Ensembl transcript IDs: ENSMUST00000170941.3, ENSMUST00000233092.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCAGCCACCTGACTGTGATGTTTGCTGTCTTGTCAGGATGTCCCTaGCTCAGGGCTGAGGGTGTAGATGCTGCACTTGGCCCAGGGACC | + |
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Preference number: 1 (lower is better) Translates to: VSHLTVMFAVLSGCP*LRAEGVDAALGPGT Trigger: GGTCCCTGGGCCAAGTGCAGCATCTACACCCTCAGCCCTGAGTCAGGGACATCCTGACAAGACAGCAAACATCACAGTCAGGTGGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR TCA 90 bp | TTTGGTCCATGGCTGACCCCAGTGTCTGGAGGAAGGTGTCCTCTATaGGGCTGCAAGCACCCCATGGTTGAGTCTCTGCACTCAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: FGPWLTPVSGGRCPL*GCKHPMVESLHSVS Trigger: GGAGACTGAGTGCAGAGACTCAACCATGGGGTGCTTGCAGCCTCATAGAGGACACCTTCCTCCAGACACTGGGGTCAGCCATGGACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR TCA 90 bp | CACATGGCCTTCGTCAGCTCTGGGACCTCCTGCTACCAACTCCTCTaGGGCCCAGGTCTTCGTCACTGTTCCTTCTCATCCAGAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: HMAFVSSGTSCYQLL*GPGLRHCSFSSRTE Trigger: TTCTGTTCTGGATGAGAAGGAACAGTGACGAAGACCTGGGCCTCAGAGGAGTTGGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR CCA 90 bp | GTCACAGTCAGGGAATATCAGAAGACACATGGCCTTCGTCAGCTCTaGGACCTCCTGCTACCAACTCCTCTGAGGCCCAGGTCTTCGTCA | + |
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Preference number: 1 (lower is better) Translates to: VTVREYQKTHGLRQL*DLLLPTPLRPRSSS Trigger: TGACGAAGACCTGGGCCTCAGAGGAGTTGGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTGTCTTCTGATATTCCCTGACTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR CCA 90 bp | ACAGAAGGGACCAGCAGTCACAGTCAGGGAATATCAGAAGACACATaGCCTTCGTCAGCTCTGGGACCTCCTGCTACCAACTCCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: TEGTSSHSQGISEDT*PSSALGPPATNSSE Trigger: CTCAGAGGAGTTGGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTGTCTTCTGATATTCCCTGACTGTGACTGCTGGTCCCTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR TCA 90 bp | TGGGTCCTGGCAGGAGCCATGAGCATGTTAAGCATGAGCCATCCTTaGAGCCTCTGGTCAGAGAGTGATAGTCTCAGCAGCAGGAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: WVLAGAMSMLSMSHP*SLWSESDSLSSRRK Trigger: TTTCCTCCTGCTGCTGAGACTATCACTCTCTGACCAGAGGCTTCAAGGATGGCTCATGCTTAACATGCTCATGGCTCCTGCCAGGACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR GCA 90 bp | GAAGGTGTCCTCTATGAGGCTGCAAGCACCCCATGGTTGAGTCTCTaGACTCAGTCTCCTCCACGAGTTCATCATTGTAGCATGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: EGVLYEAASTPWLSL*TQSPPRVHHCSMGA Trigger: TGCTCCCATGCTACAATGATGAACTCGTGGAGGAGACTGAGTGCAGAGACTCAACCATGGGGTGCTTGCAGCCTCATAGAGGACACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR CCA 90 bp | ATGCCCTGGAACTGGAGTTACAGGATGAGCTCCCAATGTGGGTACTaGAAAATGAGCCTGGGTCCTGGCAGGAGCCATGAGCATGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: MPWNWSYRMSSQCGY*KMSLGPGRSHEHVK Trigger: CTTAACATGCTCATGGCTCCTGCCAGGACCCAGGCTCATTTTCCAGTACCCACATTGGGAGCTCATCCTGTAACTCCAGTTCCAGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR TCA 90 bp | CAGGGACAGTGGCATCACTGGTCCTTATGCCTGACCTCTCCATCATaGAACAAGGCTGTGGGGGACAATGAAGGTACAATGGAGGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: QGQWHHWSLCLTSPS*NKAVGDNEGTMEVQ Trigger: CTGAACCTCCATTGTACCTTCATTGTCCCCCACAGCCTTGTTTCATGATGGAGAGGTCAGGCATAAGGACCAGTGATGCCACTGTCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR CCA 90 bp | GGATTGTCTCAGTTTTTAGTTGATATGGGAGGCTCCAGTCCACTGTaGGTGACACCATTCCCTGGGCAAGTGGCCCTGAGATGTACGAGA | + |
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Preference number: 1 (lower is better) Translates to: GLSQFLVDMGGSSPL*VTPFPGQVALRCTR Trigger: TCTCGTACATCTCAGGGCCACTTGCCCAGGGAATGGTGTCACCCACAGTGGACTGGAGCCTCCCATATCAACTAAAAACTGAGACAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR GCA 90 bp | GCGTCTTCCCATCTTTCTATCCTAGAATCTGATTTGTCATTCTCCTaGCCTGTTCCTCTCTCTCCTGATGCTTTAAGCAGGGGAGCCCCG | + |
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Preference number: 1 (lower is better) Translates to: ASSHLSILESDLSFS*PVPLSPDALSRGAP Trigger: CGGGGCTCCCCTGCTTAAAGCATCAGGAGAGAGAGGAACAGGGCAGGAGAATGACAAATCAGATTCTAGGATAGAAAGATGGGAAGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR GCA 90 bp | CAATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTTGCCCTTTaGACTTCTCTTGGGAAAGAACAGCCCTGTAACTTAAGGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: QWEQKIEWGKPRFAL*TSLGKEQPCNLRLS Trigger: TGACAGCCTTAAGTTACAGGGCTGTTCTTTCCCAAGAGAAGTGCAAAGGGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR TCA 90 bp | CTCTGCTCCAGTCCCTGCTTTAGCTCCTGTCCTGACTTCCTTCAGTaGTGGGCTGTAGACTGCAAGCATAAACCAAATGAACCTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LCSSPCFSSCPDFLQ*WAVDCKHKPNEPFP Trigger: AGGAAAAGGTTCATTTGGTTTATGCTTGCAGTCTACAGCCCATCACTGAAGGAAGTCAGGACAGGAGCTAAAGCAGGGACTGGAGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR CCA 90 bp | GAGTTCATCATTGTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTaGGGGAAACCCAGGTTTGCCCTTTGCACTTCTCTTGGGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: EFIIVAWEQWEQKIE*GKPRFALCTSLGKE Trigger: TTCTTTCCCAAGAGAAGTGCAAAGGGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR GCA 90 bp | ATGCCAAGCAAATTTATTTACAAGAATAGCAGTTTTTATGTGGCTTaGCGAGGGGAAATGGGACAGTCAGTGGAAAGCTGTTGTACAATA | + |
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Preference number: 1 (lower is better) Translates to: MPSKFIYKNSSFYVA*RGEMGQSVESCCTI Trigger: TATTGTACAACAGCTTTCCACTGACTGTCCCATTTCCCCTCGGCAAGCCACATAAAAACTGCTATTCTTGTAAATAAATTTGCTTGGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGGGTGACACCATTCCCTGGGCAAGTGGCCCTGAGATGTACGAGAAAGCTAGGCTGTCACCGGCCTaGAGGGGTTGCCAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TVGDTIPWASGPEMYEKARLSPA*RGCQAG Trigger: TCCTGCCTGGCAACCCCTTCAGGCCGGTGACAGCCT...AGCTTTCTCGTACATCTCAGGGCCACTTGCCCAGGGAATGGTGTCACCCACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCATCATCACAGAACCCCAGCATCCCTGTGGTGAGGACAGAAGCAGGAGAGGAACAGAGGGAATCTaGGGACACAGTGACCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PAIITEPQHPCGEDRSRRGTEGI*GHSDPG Trigger: CCCAGGGTCACTGTGTCCTCAGATTCCCTCTGTTCC...TCTCCTGCTTCTGTCCTCACCACAGGGATGCTGGGGTTCTGTGATGATGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAATATCAGAAGACACATGGCCTTCGTCAGCTCTGGGACCTCCTGCTACCGGAACAGAGGGAATCTaGGGACACAGTGACCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QGISEDTWPSSALGPPATGTEGI*GHSDPG Trigger: CCCAGGGTCACTGTGTCCTCAGATTCCCTCTGTTCC...GGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTGTCTTCTGATATTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTGCCGAGGGGAAATGGGACAGTCAGTGGAAAGCTGTTGTACAATAGGATCCCCAGCATCCCTGTGGTaGGGACAGAAGCAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ACRGEMGQSVESCCTIGSPASLW*GQKQER Trigger: CCTCTCCTGCTTCTGTCCTCACCACAGGGATGCTGG...GGATCCTATTGTACAACAGCTTTCCACTGACTGTCCCATTTCCCCTCGGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGGTGACACCATTCCCTGGGCAAGTGGCCCTGAGATGTACGAGAAAGCTGCTGCAAGCACCCCATaGTTGAGTCTCTGCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: TVGDTIPWASGPEMYEKAAASTP*LSLCTQ Trigger: CTGAGTGCAGAGACTCAACCATGGGGTGCTTGCAGC...AGCTTTCTCGTACATCTCAGGGCCACTTGCCCAGGGAATGGTGTCACCCACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAATATCAGAAGACACATGGCCTTCGTCAGCTCTGGGACCTCCTGCTACCCCACTGCCTGGTCTTTaGTTCTCTTCTGGCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QGISEDTWPSSALGPPATPLPGL*FSSGLL Trigger: CAGAAGGCCAGAAGAGAACCAAAGACCAGGCAGTGG...GGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTGTCTTCTGATATTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR CCA 90 bp | CACACAGGGACAGTGGCATCACTGGTCCTTATGCCTGACCTCTCCATCATGAAAGGCCTTCGTCAGCTCTaGGACCTCCTGCTACCAACT | + |
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Preference number: 2 (lower is better) Translates to: HTGTVASLVLMPDLSIMKGLRQL*DLLLPT Trigger: AGTTGGTAGCAGGAGGTCCCAGAGCTGACGAAGGCC...TTTCATGATGGAGAGGTCAGGCATAAGGACCAGTGATGCCACTGTCCCTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTTGCCAGGAAACAAATGATGTaGCCTGTAGGCTCCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: VAWEQWEQKIEWGKPRFARKQMM*PVGSQD Trigger: GTCCTGGGAGCCTACAGGTCACATCATTTGTTTCCT...GGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCCCATGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCCCTAGCTGTGTCAGCCACCTGACTGTGATGTTTGCTGTCTTGTCAGGACCACTGCCTGGTCTTTaGTTCTCTTCTGGCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QGPSCVSHLTVMFAVLSGPLPGL*FSSGLL Trigger: CAGAAGGCCAGAAGAGAACCAAAGACCAGGCAGTGG...TCCTGACAAGACAGCAAACATCACAGTCAGGTGGCTGACACAGCTAGGGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR CCA 90 bp | GTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTTGCCAAACCCTGGCTGCCTTaGAACCTGACTCTTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VAWEQWEQKIEWGKPRFAKPWLP*NLTLVF Trigger: GAAGACAAGAGTCAGGTTCCAAGGCAGCCAGGGTTT...GGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCCCATGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACGAGTTCATCATTGTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTGGGCCTTCGTCAGCTCTaGGACCTCCTGCTACCAACT | + |
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Preference number: 2 (lower is better) Translates to: PPRVHHCSMGAMGAENRVGLRQL*DLLLPT Trigger: AGTTGGTAGCAGGAGGTCCCAGAGCTGACGAAGGCC...CACTCGATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTCGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGGAAAACTCAAACCCCACTCAGCTCCTAATGAGCAACAAGACAGGAAAGCTGCCCCAGGGCCACTaGCTGGTCTTTGGTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QEENSNPTQLLMSNKTGKLPQGH*LVFGSL Trigger: AAGAGAACCAAAGACCAGGCAGTGGCCCTGGGGCAG...CTTTCCTGTCTTGTTGCTCATTAGGAGCTGAGTGGGGTTTGAGTTTTCCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCCTCCACGAGTTCATCATTGTAGCATGGGAGCAATGGGAGCAGAAAATCCTGCCCCAGGGCCACTaGCTGGTCTTTGGTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SLLHEFIIVAWEQWEQKILPQGH*LVFGSL Trigger: AAGAGAACCAAAGACCAGGCAGTGGCCCTGGGGCAG...GATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTCGTGGAGGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAATTGAGGGATTACCCTGATCAAACTGACCTGGGACATGTCTCTGAGGGACCCAGGGCCACTGCCTaGTCTTTGGTTCTCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SQLRDYPDQTDLGHVSEGPRATA*SLVLFW Trigger: CCAGAAGAGAACCAAAGACCAGGCAGTGGCCCTGGG...TCCCTCAGAGACATGTCCCAGGTCAGTTTGATCAGGGTAATCCCTCAATTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | CCAACTCCTCTGAGGCCCAGGTCTTCGTCACTGTTCCTTCTCATCCAGAACAGAGGCTGCCTTGGAACCTaGCTCTTGTCTTCAAACATA | + |
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Preference number: 2 (lower is better) Translates to: PTPLRPRSSSLFLLIQNRGCLGT*LLSSNI Trigger: TATGTTTGAAGACAAGAGTCAGGTTCCAAGGCAGCC...TCTGTTCTGGATGAGAAGGAACAGTGACGAAGACCTGGGCCTCAGAGGAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR CAA 90 bp | AGGGACTACCTTCCTTCTCCATACATTAGAACTGTGGGGAGAGCCTaGGATCACCTGGCTCCCAACACTGGTGTTTTATCACAGCAACTG | + |
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Preference number: 2 (lower is better) Translates to: RDYLPSPYIRTVGRA*DHLAPNTGVLSQQL Trigger: CAGTTGCTGTGATAAAACACCAGTGTTGGGAGCCAGGTGATCCAAGGCTCTCCCCACAGTTCTAATGTATGGAGAAGGAAGGTAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAATATCAGAAGACACATGGCCTTCGTCAGCTCTGGGACCTCCTGCTACCACATATAGAGGCATTTaGAGGGAACAGAGGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: QGISEDTWPSSALGPPATTYRGI*REQRES Trigger: AGATTCCCTCTGTTCCCTTCAAATGCCTCTATATGT...GGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTGTCTTCTGATATTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACAAATGATGTGACCTGTAGGCTCCCAGGACAGAAGGGACCAGCAGTCACAGGCTGCCTTGGAACCTaGCTCTTGTCTTCAAACATA | + |
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Preference number: 2 (lower is better) Translates to: ETNDVTCRLPGQKGPAVTGCLGT*LLSSNI Trigger: TATGTTTGAAGACAAGAGTCAGGTTCCAAGGCAGCC...TGTGACTGCTGGTCCCTTCTGTCCTGGGAGCCTACAGGTCACATCATTTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGTGTGTGTCCATCCATCCTTCCAGAACTTGTTTTGTCAGTTGTTCAGTTTCCCTGACTCAGGGCTaGGGGTGTAGATGCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: EVCVSIHPSRTCFVSCSVSLTQG*GCRCCT Trigger: AGTGCAGCATCTACACCCTCAGCCCTGAGTCAGGGA...AACTGAACAACTGACAAAACAAGTTCTGGAAGGATGGATGGACACACACACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR CAA 90 bp | AGGGATTACCCTGATCAAACTGACCTGGGACATGTCTCTGAGGGATaGTCTCAGTTTTTAGTTGATATGGGAGGCTCCAGTCCACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RDYPDQTDLGHVSEG*SQFLVDMGGSSPLW Trigger: CCACAGTGGACTGGAGCCTCCCATATCAACTAAAAACTGAGACAATCCCTCAGAGACATGTCCCAGGTCAGTTTGATCAGGGTAATCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGCAAGTGGCCCTGAGATGTACGAGAAAGCTAGCTAAGCAAGCTAAGCCAACATATAGAGGCATTTaGAGGGAACAGAGGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: PGQVALRCTRKLAKQAKPTYRGI*REQRES Trigger: AGATTCCCTCTGTTCCCTTCAAATGCCTCTATATGT...TGGCTTAGCTTGCTTAGCTAGCTTTCTCGTACATCTCAGGGCCACTTGCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCCTGACTTTGGTCCTTCTCTTGCCTCAAAGTCATCCTGGAGTGCACACTTCTATCCTAGAATCTaGTTTGTCATTCTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LSPDFGPSLASKSSWSAHFYPRI*FVILLP Trigger: GGGCAGGAGAATGACAAATCAGATTCTAGGATAGAA...GTGTGCACTCCAGGATGACTTTGAGGCAAGAGAAGGACCAAAGTCAGGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGGAAAACTCAAACCCCACTCAGCTCCTAATGAGCAACAAGACAGGAAAGAAACCCTGGCTGCCTTaGAACCTGACTCTTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QEENSNPTQLLMSNKTGKKPWLP*NLTLVF Trigger: GAAGACAAGAGTCAGGTTCCAAGGCAGCCAGGGTTT...CTTTCCTGTCTTGTTGCTCATTAGGAGCTGAGTGGGGTTTGAGTTTTCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR CCA 90 bp | TTTACAAGAATAGCAGTTTTTATGTGGCTTGCCGAGGGGAAATGGGACAGTCAGGCTGACCCCAGTGTCTaGAGGAAGGTGTCCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: FTRIAVFMWLAEGKWDSQADPSV*RKVSSM Trigger: CATAGAGGACACCTTCCTCCAGACACTGGGGTCAGC...CTGACTGTCCCATTTCCCCTCGGCAAGCCACATAAAAACTGCTATTCTTGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTTGGAACCTGACTCTTGTCTTCAAACATATAGAGGCATTTGAAGGGAACAATCTGAGGACACAGTaGCCCTGGGTAAAGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LPWNLTLVFKHIEAFEGNNLRTQ*PWVKGR Trigger: CCTTCCCTTTACCCAGGGTCACTGTGTCCTCAGATT...GTTCCCTTCAAATGCCTCTATATGTTTGAAGACAAGAGTCAGGTTCCAAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGGAAAACTCAAACCCCACTCAGCTCCTAATGAGCAACAAGACAGGAAAGCTTTGGTCCTTCTCTTaGCTCAAAGTCATCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QEENSNPTQLLMSNKTGKLWSFS*LKVILE Trigger: CTCCAGGATGACTTTGAGGCAAGAGAAGGACCAAAG...CTTTCCTGTCTTGTTGCTCATTAGGAGCTGAGTGGGGTTTGAGTTTTCCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCCGAGGGGAAATGGGACAGTCAGTGGAAAGCTGTTGTACAATAGGATCCTCCATAGACTGCTCTTaGTGGCTGGTTTTTGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: ACRGEMGQSVESCCTIGSSIDCS*WLVFVV Trigger: AACAACAAAAACCAGCCACCAAGAGCAGTCTATGGA...GGATCCTATTGTACAACAGCTTTCCACTGACTGTCCCATTTCCCCTCGGCAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR CAA 90 bp | CTGTGTGTTCAGGCGTCTTCCCATCTTTCTATCCTAGAATCTGATTaGTCATTCTCCTGCCCTGTTCCTCTCTCTCCTGATGCTTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: LCVQASSHLSILESD*SFSCPVPLSPDALS Trigger: GCTTAAAGCATCAGGAGAGAGAGGAACAGGGCAGGAGAATGACAAATCAGATTCTAGGATAGAAAGATGGGAAGACGCCTGAACACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | GCTAATCAAACAACATTGCCTAAGATACAGGGTATCAAGTGTATCACAGACAGACTCCCCTCTGTCCCCTaGCTTTGGTCCTTCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: ANQTTLPKIQGIKCITDRLPSVP*LWSFSC Trigger: GCAAGAGAAGGACCAAAGTCAGGGGACAGAGGGGAG...TCTGTCTGTGATACACTTGATACCCTGTATCTTAGGCAATGTTGTTTGATTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | TTTACAAGAATAGCAGTTTTTATGTGGCTTGCCGAGGGGAAATGGGACAGTCAGACTGGAGTTACAGGATaGGCTCCCAATGTGGGTACT | + |
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Preference number: 2 (lower is better) Translates to: FTRIAVFMWLAEGKWDSQTGVTG*APNVGT Trigger: AGTACCCACATTGGGAGCTCATCCTGTAACTCCAGT...CTGACTGTCCCATTTCCCCTCGGCAAGCCACATAAAAACTGCTATTCTTGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR-3UTR TCA 90 bp | GCTAATCAAACAACATTGCCTAAGATACAGGGTATCAAGTGTATCACAGACAGACAGCCTAGAGTCCCCTaGGGAGAGTCTCAATTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ANQTTLPKIQGIKCITDRQPRVP*GESQLR Trigger: CCTCAATTGAGACTCTCCTCAGGGGACTCTAGGCTG...TCTGTCTGTGATACACTTGATACCCTGTATCTTAGGCAATGTTGTTTGATTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTACAAGAATAGCAGTTTTTATGTGGCTTGCCGAGGGGAAATGGGACAGTCAGGTGGCTCTATATAGATaGACTCTAGCCAGAGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FTRIAVFMWLAEGKWDSQVALYR*TLARGV Trigger: CACACCTCTGGCTAGAGTGCATCTATATAGAGCCAC...CTGACTGTCCCATTTCCCCTCGGCAAGCCACATAAAAACTGCTATTCTTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCTTGGAACCTGACTCTTGTCTTCAAACATATAGAGGCATTTGAAGGGAACTCTTTGGTTCTCTTCTaGCCTTCTGAACCCACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LPWNLTLVFKHIEAFEGNSLVLF*PSEPTG Trigger: TCCAGTGGGTTCAGAAGGCCAGAAGAGAACCAAAGA...GTTCCCTTCAAATGCCTCTATATGTTTGAAGACAAGAGTCAGGTTCCAAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGCATCCCCAACCAATCTTTATAGGCAGGAATTATTATCCCCTTTCATAGGATGTTCCTCTCTCTCCTaGTGCTTTAAGCAGGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: IASPTNLYRQELLSPFIGCSSLS*CFKQGS Trigger: GCTCCCCTGCTTAAAGCATCAGGAGAGAGAGGAACA...TCCTATGAAAGGGGATAATAATTCCTGCCTATAAAGATTGGTTGGGGATGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTTCCAGAACTTGTTTTGTCAGTTGTTCAGTTTGATATTCCCTCTTGTGCTGGGGAAACCCAGGTTTaGCCTTTGCACTTCTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ILPELVLSVVQFDIPSCAGETQV*PLHFSW Trigger: CCAAGAGAAGTGCAAAGGGCAAACCTGGGTTTCCCC...AGCACAAGAGGGAATATCAAACTGAACAACTGACAAAACAAGTTCTGGAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTGCATCCCCAACCAATCTTTATAGGCAGGAATTATTATCCCCTTTCATAGGACCATGGTTGAGTCTCTaGACTCAGTCTCCTCCACGA | + |
|
Preference number: 2 (lower is better) Translates to: IASPTNLYRQELLSPFIGPWLSL*TQSPPR Trigger: TCGTGGAGGAGACTGAGTGCAGAGACTCAACCATGG...TCCTATGAAAGGGGATAATAATTCCTGCCTATAAAGATTGGTTGGGGATGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTAATCAAACAACATTGCCTAAGATACAGGGTATCAAGTGTATCACAGACAGAAACCACAGCTCCTTGTaGGGAGGAGTTGGGTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ANQTTLPKIQGIKCITDRNHSSL*GGVGSK Trigger: TTTGGACCCAACTCCTCCCCACAAGGAGCTGTGGTT...TCTGTCTGTGATACACTTGATACCCTGTATCTTAGGCAATGTTGTTTGATTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTAATCAAACAACATTGCCTAAGATACAGGGTATCAAGTGTATCACAGACAGACCTTTCCATGCTCTGTaGGCTAGTGAGTATCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ANQTTLPKIQGIKCITDRPFHAL*ASEYPY Trigger: GTAGGGATACTCACTAGCCCACAGAGCATGGAAAGG...TCTGTCTGTGATACACTTGATACCCTGTATCTTAGGCAATGTTGTTTGATTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTTCCAGAACTTGTTTTGTCAGTTGTTCAGTTTGATATTCCCTCTTGTGCTGATTTGTCATTCTCCTaGCCTGTTCCTCTCTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ILPELVLSVVQFDIPSCADLSFS*PVPLSP Trigger: AGGAGAGAGAGGAACAGGGCAGGAGAATGACAAATC...AGCACAAGAGGGAATATCAAACTGAACAACTGACAAAACAAGTTCTGGAAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CCA 90 bp | ATTGCATCCCCAACCAATCTTTATAGGCAGGAATTATTATCCCCTTTCATAGGATCTTTGGTTCTCTTCTaGCCTTCTGAACCCACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: IASPTNLYRQELLSPFIGSLVLF*PSEPTG Trigger: TCCAGTGGGTTCAGAAGGCCAGAAGAGAACCAAAGA...TCCTATGAAAGGGGATAATAATTCCTGCCTATAAAGATTGGTTGGGGATGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTTCGTCAGCTCTGGGACCTCCTGCTACCAACTCCTCTGAGGCCCAGGTCTGCCACTGCCTGGTCTTaGGTTCTCTTCTGGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLRQLWDLLLPTPLRPRSATAWS*VLFWPS Trigger: AGAAGGCCAGAAGAGAACCAAAGACCAGGCAGTGGC...AGACCTGGGCCTCAGAGGAGTTGGTAGCAGGAGGTCCCAGAGCTGACGAAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR CCA 72 bp | GCGGCATTGCTTTGGTCCATGGCTGACCCCAGTGTCTaGAGGAAGGTGTCCTCTATGAGGCTGCAAGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: AALLWSMADPSV*RKVSSMRLQAP Trigger: GGGTGCTTGCAGCCTCATAGAGGACACCTTCCTCCAGACACTGGGGTCAGCCATGGACCAAAGCAATGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CCA 72 bp | GGGCCTGAGGAGGCCAGAAAGGGGCATCAGATGCCCTaGAACTGGAGTTACAGGATGAGCTCCCAATGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GPEEARKGHQMP*NWSYRMSSQCG Trigger: CCCACATTGGGAGCTCATCCTGTAACTCCAGTTCCAGGGCATCTGATGCCCCTTTCTGGCCTCCTCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR TCA 72 bp | GGCCTGAAGGGGTTGCCAGGCAGGAAACAAATGATGTaGCCTGTAGGCTCCCAGGACAGAAGGGACCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLKGLPGRKQMM*PVGSQDRRDQQ Trigger: CTGCTGGTCCCTTCTGTCCTGGGAGCCTACAGGTCACATCATTTGTTTCCTGCCTGGCAACCCCTTCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR TCA 72 bp | TGGCTGACCCCAGTGTCTGGAGGAAGGTGTCCTCTATaGGGCTGCAAGCACCCCATGGTTGAGTCTCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: WLTPVSGGRCPL*GCKHPMVESLH Trigger: GTGCAGAGACTCAACCATGGGGTGCTTGCAGCCTCATAGAGGACACCTTCCTCCAGACACTGGGGTCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CCA 72 bp | AGGGAATATCAGAAGACACATGGCCTTCGTCAGCTCTaGGACCTCCTGCTACCAACTCCTCTGAGGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: REYQKTHGLRQL*DLLLPTPLRPR Trigger: CCTGGGCCTCAGAGGAGTTGGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTGTCTTCTGATATTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR CCA 72 bp | GAGGAGGCCAGAAAGGGGCATCAGATGCCCTGGAACTaGAGTTACAGGATGAGCTCCCAATGTGGGTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: EEARKGHQMPWN*SYRMSSQCGYW Trigger: CCAGTACCCACATTGGGAGCTCATCCTGTAACTCCAGTTCCAGGGCATCTGATGCCCCTTTCTGGCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTTGCCCTTTGCACGCCACTGCCTGGTCTTaGGTTCTCTTCTGGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GAMGAENRVGETQVCPLHATAWS*VLFWPS Trigger: AGAAGGCCAGAAGAGAACCAAAGACCAGGCAGTGGC...GTGCAAAGGGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR CCA 72 bp | GAGGAAGGTGTCCTCTATGAGGCTGCAAGCACCCCATaGTTGAGTCTCTGCACTCAGTCTCCTCCACGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: EEGVLYEAASTP*LSLCTQSPPRV Trigger: AACTCGTGGAGGAGACTGAGTGCAGAGACTCAACCATGGGGTGCTTGCAGCCTCATAGAGGACACCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CCA 72 bp | CCTGACTTTGGTCCTTCTCTTGCCTCAAAGTCATCCTaGAGTGCACACCAAGGCCCTAGCTGTGTCAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PDFGPSLASKSS*SAHQGPSCVSH Trigger: GTGGCTGACACAGCTAGGGCCTTGGTGTGCACTCCAGGATGACTTTGAGGCAAGAGAAGGACCAAAGTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR TCA 72 bp | CTGACTGTGATGTTTGCTGTCTTGTCAGGATGTCCCTaGCTCAGGGCTGAGGGTGTAGATGCTGCACTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LTVMFAVLSGCP*LRAEGVDAALG Trigger: GCCAAGTGCAGCATCTACACCCTCAGCCCTGAGTCAGGGACATCCTGACAAGACAGCAAACATCACAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR TCA 72 bp | GACCTCTCCATCATGAAACAAGGCTGTGGGGGACAATaGAGGTACAATGGAGGTTCAGGGCCAGTATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DLSIMKQGCGGQ*RYNGGSGPVWG Trigger: CCCCCATACTGGCCCTGAACCTCCATTGTACCTTCATTGTCCCCCACAGCCTTGTTTCATGATGGAGAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR GCA 72 bp | AAGCTAAGCCAGCAGACAGCGTTTCTCCATGGTCTCTaGTCCAGTCCCTGCTTTAGCTCCTGTCCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: KLSQQTAFLHGL*SSPCFSSCPDF Trigger: GAAGTCAGGACAGGAGCTAAAGCAGGGACTGGAGCAGAGACCATGGAGAAACGCTGTCTGCTGGCTTAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR GCA 72 bp | CTCTATGAGGCTGCAAGCACCCCATGGTTGAGTCTCTaGACTCAGTCTCCTCCACGAGTTCATCATTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LYEAASTPWLSL*TQSPPRVHHCS Trigger: GCTACAATGATGAACTCGTGGAGGAGACTGAGTGCAGAGACTCAACCATGGGGTGCTTGCAGCCTCATAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CCA 72 bp | GCACTCAGTCTCCTCCACGAGTTCATCATTGTAGCATaGGAGCAATGGGAGCAGAAAATCGAGTGGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALSLLHEFIIVA*EQWEQKIEWGK Trigger: TTTCCCCCACTCGATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTCGTGGAGGAGACTGAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTACAAGAATAGCAGTTTTTATGTGGCTTGCCGAGGGGAAATGGGACAGTCAGACCGGCCTGAAGGGGTaGCCAGGCAGGAAACAAATG | + |
|
Preference number: 3 (lower is better) Translates to: FTRIAVFMWLAEGKWDSQTGLKG*PGRKQM Trigger: CATTTGTTTCCTGCCTGGCAACCCCTTCAGGCCGGT...CTGACTGTCCCATTTCCCCTCGGCAAGCCACATAAAAACTGCTATTCTTGTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCACGAGTTCATCATTGTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTGCCCTTTGCACTTCTCTaGGGAAAGAACAGCCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PPRVHHCSMGAMGAENRVPFALL*GKNSPV Trigger: TACAGGGCTGTTCTTTCCCAAGAGAAGTGCAAAGGG...CACTCGATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTCGTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCACGAGTTCATCATTGTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTGACCCAGGTTTGCCCTTaGCACTTCTCTTGGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPRVHHCSMGAMGAENRVTQVCP*HFSWER Trigger: TCTTTCCCAAGAGAAGTGCAAAGGGCAAACCTGGGT...CACTCGATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTCGTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR TCA 72 bp | TGGCATCACTGGTCCTTATGCCTGACCTCTCCATCATaGAACAAGGCTGTGGGGGACAATGAAGGTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: WHHWSLCLTSPS*NKAVGDNEGTM Trigger: CATTGTACCTTCATTGTCCCCCACAGCCTTGTTTCATGATGGAGAGGTCAGGCATAAGGACCAGTGATGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR TCA 72 bp | ACCTGGCTCCCAACACTGGTGTTTTATCACAGCAACTaGAAATCCAGCCATCATCACAGAACCCCAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TWLPTLVFYHSN*KSSHHHRTPAS Trigger: GGATGCTGGGGTTCTGTGATGATGGCTGGATTTTCAGTTGCTGTGATAAAACACCAGTGTTGGGAGCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CCA 72 bp | ATTGTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTaGGGGAAACCCAGGTTTGCCCTTTGCACTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IVAWEQWEQKIE*GKPRFALCTSL Trigger: AAGAGAAGTGCAAAGGGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCCCATGCTACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR CCA 72 bp | TTCCTTCTCCATACATTAGAACTGTGGGGAGAGCCTTaGATCACCTGGCTCCCAACACTGGTGTTTTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: FLLHTLELWGEP*ITWLPTLVFYH Trigger: GTGATAAAACACCAGTGTTGGGAGCCAGGTGATCCAAGGCTCTCCCCACAGTTCTAATGTATGGAGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTGTGGGGAGGAGTTGGGTCCAAAGGTCATTTGATAAAACCCACAGTTTCAGGAGAGCAAGGAAGTaGACAGGTACCTTTAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLVGRSWVQRSFDKTHSFRRARK*TGTFNC Trigger: ACAGTTAAAGGTACCTGTCAACTTCCTTGCTCTCCT...GAAACTGTGGGTTTTATCAAATGACCTTTGGACCCAACTCCTCCCCACAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTACAAGAATAGCAGTTTTTATGTGGCTTGCCGAGGGGAAATGGGACAGTCAGACTTTGGTCCTTCTCTaGCCTCAAAGTCATCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FTRIAVFMWLAEGKWDSQTLVLL*PQSHPG Trigger: TCCAGGATGACTTTGAGGCAAGAGAAGGACCAAAGT...CTGACTGTCCCATTTCCCCTCGGCAAGCCACATAAAAACTGCTATTCTTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR TCA 72 bp | CTCTGGACCAATGATCTAGATAGTAGAGGGCAAGTCTaGGCTGTATGGACTCTTCTTCTTTTTCTTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LWTNDLDSRGQV*AVWTLLLFLLL Trigger: GAGGAGAAGAAAAAGAAGAAGAGTCCATACAGCTCAGACTTGCCCTCTACTATCTAGATCATTGGTCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CCA 72 bp | TATAGTGGCATTGGGTCTAATAACCACAGCTCCTTGTaGGGAGGAGTTGGGTCCAAAGGTCATTTGATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YSGIGSNNHSSL*GGVGSKGHLIK Trigger: TTTTATCAAATGACCTTTGGACCCAACTCCTCCCCACAAGGAGCTGTGGTTATTAGACCCAATGCCACTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR TCA 72 bp | CATCCTTCCAGAACTTGTTTTGTCAGTTGTTCAGTTTaGTATTCCCTCTTGTGCTCTCATCTGGAAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HPSRTCFVSCSV*YSLLCSHLEAE Trigger: CTCTGCTTCCAGATGAGAGCACAAGAGGGAATATCAAACTGAACAACTGACAAAACAAGTTCTGGAAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR GCA 72 bp | AAATTTATTTACAAGAATAGCAGTTTTTATGTGGCTTaGCGAGGGGAAATGGGACAGTCAGTGGAAAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KFIYKNSSFYVA*RGEMGQSVESC Trigger: ACAGCTTTCCACTGACTGTCCCATTTCCCCTCGGCAAGCCACATAAAAACTGCTATTCTTGTAAATAAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CCA 72 bp | CAAGCAAATTTATTTACAAGAATAGCAGTTTTTATGTaGCTTGCCGAGGGGAAATGGGACAGTCAGTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QANLFTRIAVFM*LAEGKWDSQWK Trigger: TTTCCACTGACTGTCCCATTTCCCCTCGGCAAGCCACATAAAAACTGCTATTCTTGTAAATAAATTTGCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| CDS-3UTR CCA 90 bp | GACACAGTGACCCTGGGTAAAGGGAAGGCAGCTCTACTGTCCTCCTGCCCCAGGGGCACGTCCCCGTGGTaGACAAGCTGCTACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DTVTLGKGKAALLSSCPRGTSPW*TSCYSG Trigger: ACCAGAGTAGCAGCTTGTCCACCACGGGGACGTGCC...CCTGGGGCAGGAGGACAGTAGAGCTGCCTTCCCTTTACCCAGGGTCACTGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTTCGTCAGCTCTGGGACCTCCTGCTACCAACTCCTCTGAGGCCCAGGTCTTCACAGGGGTTGGTGTaGTGGTCCCTGAAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRQLWDLLLPTPLRPRSSQGLV*WSLKPR Trigger: CCTTGGCTTCAGGGACCACCACACCAACCCCTGTGA...AGACCTGGGCCTCAGAGGAGTTGGTAGCAGGAGGTCCCAGAGCTGACGAAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
||
| CDS-3UTR CCA 90 bp | GACACAGTGACCCTGGGTAAAGGGAAGGCAGCTCTACTGTCCTCCTGCCCCAGGGACAAGCTGCTACTCTaGTGTCTGGACATGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTVTLGKGKAALLSSCPRDKLLL*CLDMVE Trigger: CTCCACCATGTCCAGACACCAGAGTAGCAGCTTGTC...CCTGGGGCAGGAGGACAGTAGAGCTGCCTTCCCTTTACCCAGGGTCACTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGAATATCAGAAGACACATGGCCTTCGTCAGCTCTGGGACCTCCTGCTACCGCTAGGAGACAGGGTTaGGGGCTGGGACTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGISEDTWPSSALGPPATARRQG*GLGLCV Trigger: AACACAGAGTCCCAGCCCGCAACCCTGTCTCCTAGC...GGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTGTCTTCTGATATTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTTGCCGACAGGGTTGCGGGCTaGGACTCTGTGTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAWEQWEQKIEWGKPRFADRVAG*DSVFLS Trigger: TGAGAGGAACACAGAGTCCCAGCCCGCAACCCTGTC...GGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCCCATGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCAATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTTGCCCTTTGCACCCGTGGTGGACAAGCTaGTACTCTGGTGTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GAMGAENRVGETQVCPLHPWWTS*YSGVWT Trigger: TGTCCAGACACCAGAGTAGCAGCTTGTCCACCACGG...GTGCAAAGGGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS-3UTR CCA 90 bp | ACCAACTCCTCTGAGGCCCAGGTCTTCGTCACTGTTCCTTCTCATCCAGAACAGGACAGGGTTGCGGGCTaGGACTCTGTGTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TNSSEAQVFVTVPSHPEQDRVAG*DSVFLS Trigger: TGAGAGGAACACAGAGTCCCAGCCCGCAACCCTGTC...CTGTTCTGGATGAGAAGGAACAGTGACGAAGACCTGGGCCTCAGAGGAGTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGCCCTAGCTGTGTCAGCCACCTGACTGTGATGTTTGCTGTCTTGTCAGGACCGTGGTGGACAAGCTaGTACTCTGGTGTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGPSCVSHLTVMFAVLSGPWWTS*YSGVWT Trigger: TGTCCAGACACCAGAGTAGCAGCTTGTCCACCACGG...TCCTGACAAGACAGCAAACATCACAGTCAGGTGGCTGACACAGCTAGGGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| CDS-3UTR CCA 90 bp | CAGGGAATATCAGAAGACACATGGCCTTCGTCAGCTCTGGGACCTCCTGCTACCTGGACATGGTGGAGGTaGTCACTGGATCAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGISEDTWPSSALGPPATWTWWR*SLDQQR Trigger: TCTCTGCTGATCCAGTGACCACCTCCACCATGTCCA...GGTAGCAGGAGGTCCCAGAGCTGACGAAGGCCATGTGTCTTCTGATATTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCAATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTTGCCCTTTGCACGACAAGCTGCTACTCTaGTGTCTGGACATGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAMGAENRVGETQVCPLHDKLLL*CLDMVE Trigger: CTCCACCATGTCCAGACACCAGAGTAGCAGCTTGTC...GTGCAAAGGGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR CCA 90 bp | CCTCCACGAGTTCATCATTGTAGCATGGGAGCAATGGGAGCAGAAAATCGAGTGGGCACGTCCCCGTGGTaGACAAGCTGCTACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRVHHCSMGAMGAENRVGTSPW*TSCYSG Trigger: ACCAGAGTAGCAGCTTGTCCACCACGGGGACGTGCC...CACTCGATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTCGTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR CAA 72 bp | GAAGGTGTCCTCTATGAGGCTGCAAGCACCCCATGGTaGAGTCTCTGCACTCAGTCTCCTCCACGAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGVLYEAASTPW*SLCTQSPPRVH Trigger: ATGAACTCGTGGAGGAGACTGAGTGCAGAGACTCAACCATGGGGTGCTTGCAGCCTCATAGAGGACACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CAA 72 bp | AGGAGACAAAAACGAGGTCTAGACAGGGTTTGTGGCTaGGTCAGGGTCACACAGGGACAGTGGCATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRQKRGLDRVCG*VRVTQGQWHHW Trigger: CCAGTGATGCCACTGTCCCTGTGTGACCCTGACCAAGCCACAAACCCTGTCTAGACCTCGTTTTTGTCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS-3UTR TCA 90 bp | GGAGCAATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTTGCCCTTTGCACCGTTTCTCTCAGTTGTaGGGGCTGGATACACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAMGAENRVGETQVCPLHRFSQL*GLDTLP Trigger: TGGAAGTGTATCCAGCCCTCACAACTGAGAGAAACG...GTGCAAAGGGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCCTCCACGAGTTCATCATTGTAGCATGGGAGCAATGGGAGCAGAAAATCTTGGGAGTTAACGGGTaGCACGTCCCCGTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLHEFIIVAWEQWEQKILGVNG*HVPVVD Trigger: GTCCACCACGGGGACGTGCCACCCGTTAACTCCCAA...GATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTCGTGGAGGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAGGGACCAGCAGTCACAGTCAGGGAATATCAGAAGACACATGGCCTTCGAGGTTCTCATTGGAGTaGCCTGAGACACAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEGTSSHSQGISEDTWPSRFSLE*PETQPC Trigger: ACAGGGCTGTGTCTCAGGTCACTCCAATGAGAACCT...CGAAGGCCATGTGTCTTCTGATATTCCCTGACTGTGACTGCTGGTCCCTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTCCTCCACGAGTTCATCATTGTAGCATGGGAGCAATGGGAGCAGAAAATCGCTAGGAGACAGGGTTaGGGGCTGGGACTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLHEFIIVAWEQWEQKIARRQG*GLGLCV Trigger: AACACAGAGTCCCAGCCCGCAACCCTGTCTCCTAGC...GATTTTCTGCTCCCATTGCTCCCATGCTACAATGATGAACTCGTGGAGGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR CCA 90 bp | AGCCTTGGATCACCTGGCTCCCAACACTGGTGTTTTATCACAGCAACTGAAAATTTGGGAGTTAACGGGTaGCACGTCCCCGTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLGSPGSQHWCFITATENLGVNG*HVPVVD Trigger: GTCCACCACGGGGACGTGCCACCCGTTAACTCCCAA...ATTTTCAGTTGCTGTGATAAAACACCAGTGTTGGGAGCCAGGTGATCCAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS-3UTR CCA 90 bp | CCTGGGCAAGTGGCCCTGAGATGTACGAGAAAGCTAGCTAAGCAAGCTAAGCCACAACACCACAGGTGCTaGAAGAAATGTCAACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGQVALRCTRKLAKQAKPQHHRC*KKCQHH Trigger: GTGGTGTTGACATTTCTTCCAGCACCTGTGGTGTTG...TGGCTTAGCTTGCTTAGCTAGCTTTCTCGTACATCTCAGGGCCACTTGCCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CAA 72 bp | AATGGGAGCAGAAAATCGAGTGGGGGAAACCCAGGTTaGCCCTTTGCACTTCTCTTGGGAAAGAACAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NGSRKSSGGNPG*PFALLLGKNSP Trigger: AGGGCTGTTCTTTCCCAAGAGAAGTGCAAAGGGCAAACCTGGGTTTCCCCCACTCGATTTTCTGCTCCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR TCA 90 bp | CAGGAGGAAAACTCAAACCCCACTCAGCTCCTAATGAGCAACAAGACAGGAAAGAGGTTCTCATTGGAGTaGCCTGAGACACAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEENSNPTQLLMSNKTGKRFSLE*PETQPC Trigger: ACAGGGCTGTGTCTCAGGTCACTCCAATGAGAACCT...CTTTCCTGTCTTGTTGCTCATTAGGAGCTGAGTGGGGTTTGAGTTTTCCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGTGTGTGTGTCCATCCATCCTTCCAGAACTTGTTTTGTCAGTTGTTCATCTGGTGTCTGGACATaGTGGAGGTGGTCACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PEVCVSIHPSRTCFVSCSSGVWT*WRWSLD Trigger: ATCCAGTGACCACCTCCACCATGTCCAGACACCAGA...TGAACAACTGACAAAACAAGTTCTGGAAGGATGGATGGACACACACACCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CAA 72 bp | CTTCCTTCTCCATACATTAGAACTGTGGGGAGAGCCTaGGATCACCTGGCTCCCAACACTGGTGTTTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSPYIRTVGRA*DHLAPNTGVLS Trigger: TGATAAAACACCAGTGTTGGGAGCCAGGTGATCCAAGGCTCTCCCCACAGTTCTAATGTATGGAGAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCCCTTTGCACTTCTCTTGGGAAAGAACAGCCCTGTAACTTAAGGCTGTCACTCAGTTGTGAGGGCTaGATACACTTCCAGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FALCTSLGKEQPCNLRLSLSCEG*IHFQLE Trigger: TTCCAACTGGAAGTGTATCCAGCCCTCACAACTGAG...TGACAGCCTTAAGTTACAGGGCTGTTCTTTCCCAAGAGAAGTGCAAAGGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
||
| 3UTR CAA 72 bp | CTCATCCAGAACAGAACTCTAGAAACCCTGGCTGCCTaGGAACCTGACTCTTGTCTTCAAACATATAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQNRTLETLAA*EPDSCLQTYRG Trigger: GCCTCTATATGTTTGAAGACAAGAGTCAGGTTCCAAGGCAGCCAGGGTTTCTAGAGTTCTGTTCTGGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR CAA 72 bp | CAGGCGTCTTCCCATCTTTCTATCCTAGAATCTGATTaGTCATTCTCCTGCCCTGTTCCTCTCTCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QASSHLSILESD*SFSCPVPLSPD Trigger: ATCAGGAGAGAGAGGAACAGGGCAGGAGAATGACAAATCAGATTCTAGGATAGAAAGATGGGAAGACGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CAA 72 bp | CCTGATCAAACTGACCTGGGACATGTCTCTGAGGGATaGTCTCAGTTTTTAGTTGATATGGGAGGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PDQTDLGHVSEG*SQFLVDMGGSS Trigger: ACTGGAGCCTCCCATATCAACTAAAAACTGAGACAATCCCTCAGAGACATGTCCCAGGTCAGTTTGATCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS-3UTR CCA 90 bp | ATTGCATCCCCAACCAATCTTTATAGGCAGGAATTATTATCCCCTTTCATAGGATGGACATGGTGGAGGTaGTCACTGGATCAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IASPTNLYRQELLSPFIGWTWWR*SLDQQR Trigger: TCTCTGCTGATCCAGTGACCACCTCCACCATGTCCA...TCCTATGAAAGGGGATAATAATTCCTGCCTATAAAGATTGGTTGGGGATGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CAA 72 bp | GCCAGAGGTGTGTGTGTCCATCCATCCTTCCAGAACTaGTTTTGTCAGTTGTTCAGTTTGATATTCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARGVCVHPSFQN*FCQLFSLIFPL Trigger: AAGAGGGAATATCAAACTGAACAACTGACAAAACAAGTTCTGGAAGGATGGATGGACACACACACCTCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| 3UTR CAA 72 bp | TTTTATAGTGGCATTGGGTCTAATAACCACAGCTCCTaGTGGGGAGGAGTTGGGTCCAAAGGTCATTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: FYSGIGSNNHSS*WGGVGSKGHLI Trigger: TATCAAATGACCTTTGGACCCAACTCCTCCCCACAAGGAGCTGTGGTTATTAGACCCAATGCCACTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| CDS-3UTR CCA 90 bp | AACCTGACTCTTGTCTTCAAACATATAGAGGCATTTGAAGGGAACAGAGGGAATCAACACCACAGGTGCTaGAAGAAATGTCAACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLTLVFKHIEAFEGNRGNQHHRC*KKCQHH Trigger: GTGGTGTTGACATTTCTTCCAGCACCTGTGGTGTTG...ATTCCCTCTGTTCCCTTCAAATGCCTCTATATGTTTGAAGACAAGAGTCAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| 3UTR CAA 72 bp | CCATCCTTCCAGAACTTGTTTTGTCAGTTGTTCAGTTaGATATTCCCTCTTGTGCTCTCATCTGGAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFQNLFCQLFS*IFPLVLSSGSR Trigger: TCTGCTTCCAGATGAGAGCACAAGAGGGAATATCAAACTGAACAACTGACAAAACAAGTTCTGGAAGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR CAA 72 bp | AGGTGTGTGTGTCCATCCATCCTTCCAGAACTTGTTTaGTCAGTTGTTCAGTTTGATATTCCCTCTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCVCPSILPELV*SVVQFDIPSCA Trigger: AGCACAAGAGGGAATATCAAACTGAACAACTGACAAAACAAGTTCTGGAAGGATGGATGGACACACACACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR CAA 72 bp | TGTGTCCATCCATCCTTCCAGAACTTGTTTTGTCAGTaGTTCAGTTTGATATTCCCTCTTGTGCTCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CVHPSFQNLFCQ*FSLIFPLVLSS Trigger: AGATGAGAGCACAAGAGGGAATATCAAACTGAACAACTGACAAAACAAGTTCTGGAAGGATGGATGGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| 3UTR CAA 72 bp | AGACACTTTCAGGTCGCACAGTGTTTATGTCATCCATaGCATCCCCAACCAATCTTTATAGGCAGGAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: RHFQVAQCLCHP*HPQPIFIGRNY Trigger: ATAATTCCTGCCTATAAAGATTGGTTGGGGATGCAATGGATGACATAAACACTGTGCGACCTGAAAGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS CCA 90 bp | GGGTCTCGCCTTCACGCCGCCACACTTTCCTGTACAGGTTCTCATTaGAGTGACCTGAGACACAGCCCTGTAGCCACAGCAGCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSRLHAATLSCTGSH*SDLRHSPVATAAAA Trigger: TGCTGCTGCTGCTGTGGCTACAGGGCTGTGTCTCAGGTCACTCCAATGAGAACCTGTACAGGAAAGTGTGGCGGCGTGAAGGCGAGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS CCA 90 bp | GGCACGTCCCCGTGGTGGACAAGCTGCTACTCTGGTGTCTGGACATaGTGGAGGTGGTCACTGGATCAGCAGAGAAGGATCTTGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTSPWWTSCYSGVWT*WRWSLDQQRRILHC Trigger: GCAATGCAAGATCCTTCTCTGCTGATCCAGTGACCACCTCCACCATGTCCAGACACCAGAGTAGCAGCTTGTCCACCACGGGGACGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS GCA 90 bp | CACTGGATCAGCAGAGAAGGATCTTGCATTGCTAGGAGACAGGGTTaGGGGCTGGGACTCTGTGTTCCTCTCAGGCTCTGTAACGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HWISREGSCIARRQG*GLGLCVPLRLCNGA Trigger: GGCACCGTTACAGAGCCTGAGAGGAACACAGAGTCCCAGCCCGCAACCCTGTCTCCTAGCAATGCAAGATCCTTCTCTGCTGATCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR CAA 90 bp | CTGGGACCTCCTGCTACCAACTCCTCTGAGGCCCAGGTCTTCGTCACTGTTCCTTGGATACACTTCCAGTaGGAAACCCACCAAAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGPPATNSSEAQVFVTVPWIHFQ*ETHQRV Trigger: TACCCTTTGGTGGGTTTCCAACTGGAAGTGTATCCA...AGGAACAGTGACGAAGACCTGGGCCTCAGAGGAGTTGGTAGCAGGAGGTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR CAA 90 bp | ACCAACTCCTCTGAGGCCCAGGTCTTCGTCACTGTTCCTTCTCATCCAGAACAGCCATCCATGGGGGTGTaGGTAAGATGTGTGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TNSSEAQVFVTVPSHPEQPSMGV*VRCVWG Trigger: TCCCCACACACATCTTACCAACACCCCCATGGATGG...CTGTTCTGGATGAGAAGGAACAGTGACGAAGACCTGGGCCTCAGAGGAGTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
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| CDS CCA 90 bp | AACGGTGCCACTGGTATCGATGAAACTGTAGCCTGTCACAGGGGTTaGTGTGGTGGTCCCTGGATACACTTCCAGTTGGAAACCCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: NGATGIDETVACHRG*CGGPWIHFQLETHQ Trigger: TTGGTGGGTTTCCAACTGGAAGTGTATCCAGGGACCACCACACCAACCCCTGTGACAGGCTACAGTTTCATCGATACCAGTGGCACCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS-3UTR CAA 90 bp | CCTGGGCAAGTGGCCCTGAGATGTACGAGAAAGCTAGCTAAGCAAGCTAAGCCAGAGAAGGATCTTGCATaGCTAGGAGACAGGGTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGQVALRCTRKLAKQAKPEKDLA*LGDRVA Trigger: CGCAACCCTGTCTCCTAGCAATGCAAGATCCTTCTC...TGGCTTAGCTTGCTTAGCTAGCTTTCTCGTACATCTCAGGGCCACTTGCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS TCA 90 bp | ATCGATGAAACTGTAGCCTGTCACAGGGGTTGGTGTGGTGGTCCCTaGAGCCAAGGTGAGGAGTCCAGATGTGAACATGGTCACTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IDETVACHRGWCGGP*SQGEESRCEHGHFR Trigger: TCTGAAGTGACCATGTTCACATCTGGACTCCTCACCTTGGCTTCAGGGACCACCACACCAACCCCTGTGACAGGCTACAGTTTCATCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
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| CDS GCA 90 bp | ATGTCTCTTCTTCCAAAACCCGTAGGCTACGACCAACACCACAGGTaGTGGAAGAAATGTCAACACCACCACCATCGCAGGGATGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: MSLLPKPVGYDQHHR*WKKCQHHHHRRDVS Trigger: ACTTACATCCCTGCGATGGTGGTGGTGTTGACATTTCTTCCAGCACCTGTGGTGTTGGTCGTAGCCTACGGGTTTTGGAAGAAGAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR CAA 90 bp | TTTGCCCTTTGCACTTCTCTTGGGAAAGAACAGCCCTGTAACTTAAGGCTGTCAGAGAAGGATCTTGCATaGCTAGGAGACAGGGTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FALCTSLGKEQPCNLRLSEKDLA*LGDRVA Trigger: CGCAACCCTGTCTCCTAGCAATGCAAGATCCTTCTC...TGACAGCCTTAAGTTACAGGGCTGTTCTTTCCCAAGAGAAGTGCAAAGGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR CAA 90 bp | TTTGCCCTTTGCACTTCTCTTGGGAAAGAACAGCCCTGTAACTTAAGGCTGTCATCGCACTTCTTCTTCTaGACTTTGCACCAAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FALCTSLGKEQPCNLRLSSHFFF*TLHQDL Trigger: CAAGTCTTGGTGCAAAGTCAAGAAGAAGAAGTGCGA...TGACAGCCTTAAGTTACAGGGCTGTTCTTTCCCAAGAGAAGTGCAAAGGGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR CAA 90 bp | AACCTGACTCTTGTCTTCAAACATATAGAGGCATTTGAAGGGAACAGAGGGAATTTCTTCTTCTTGACTTaGCACCAAGACTTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLTLVFKHIEAFEGNRGNFFFLT*HQDLAS Trigger: TGAGGCCAAGTCTTGGTGCAAAGTCAAGAAGAAGAA...ATTCCCTCTGTTCCCTTCAAATGCCTCTATATGTTTGAAGACAAGAGTCAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS-3UTR CAA 90 bp | GCTAATCAAACAACATTGCCTAAGATACAGGGTATCAAGTGTATCACAGACAGATTCTTCTTCTTGACTTaGCACCAAGACTTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ANQTTLPKIQGIKCITDRFFFLT*HQDLAS Trigger: TGAGGCCAAGTCTTGGTGCAAAGTCAAGAAGAAGAA...TCTGTCTGTGATACACTTGATACCCTGTATCTTAGGCAATGTTGTTTGATTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS-3UTR CAA 90 bp | ATCCTTCCAGAACTTGTTTTGTCAGTTGTTCAGTTTGATATTCCCTCTTGTGCTTCGCACTTCTTCTTCTaGACTTTGCACCAAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILPELVLSVVQFDIPSCASHFFF*TLHQDL Trigger: CAAGTCTTGGTGCAAAGTCAAGAAGAAGAAGTGCGA...AGCACAAGAGGGAATATCAAACTGAACAACTGACAAAACAAGTTCTGGAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| CDS CCA 72 bp | GGGTGGCACGTCCCCGTGGTGGACAAGCTGCTACTCTaGTGTCTGGACATGGTGGAGGTGGTCACTGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: GWHVPVVDKLLL*CLDMVEVVTGS Trigger: TGATCCAGTGACCACCTCCACCATGTCCAGACACCAGAGTAGCAGCTTGTCCACCACGGGGACGTGCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS GCA 72 bp | GAGTTAACGGGTGGCACGTCCCCGTGGTGGACAAGCTaGTACTCTGGTGTCTGGACATGGTGGAGGTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ELTGGTSPWWTS*YSGVWTWWRWS Trigger: TGACCACCTCCACCATGTCCAGACACCAGAGTAGCAGCTTGTCCACCACGGGGACGTGCCACCCGTTAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS TCA 72 bp | CGCCGCCACACTTTCCTGTACAGGTTCTCATTGGAGTaGCCTGAGACACAGCCCTGTAGCCACAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRHTFLYRFSLE*PETQPCSHSSS Trigger: GCTGCTGCTGTGGCTACAGGGCTGTGTCTCAGGTCACTCCAATGAGAACCTGTACAGGAAAGTGTGGCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS GCA 72 bp | GGTGGAGGTGGTCACTGGATCAGCAGAGAAGGATCTTaGATTGCTAGGAGACAGGGTTGCGGGCTGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: GGGGHWISREGS*IARRQGCGLGL Trigger: GAGTCCCAGCCCGCAACCCTGTCTCCTAGCAATGCAAGATCCTTCTCTGCTGATCCAGTGACCACCTCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS CCA 72 bp | CCGTGGTGGACAAGCTGCTACTCTGGTGTCTGGACATaGTGGAGGTGGTCACTGGATCAGCAGAGAAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PWWTSCYSGVWT*WRWSLDQQRRI Trigger: GATCCTTCTCTGCTGATCCAGTGACCACCTCCACCATGTCCAGACACCAGAGTAGCAGCTTGTCCACCACGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS CAA 90 bp | CCCCTCACCCAGCTCCGGGTGAAGTTGTGGTCGCACTTCTTCTTCTaGACTTTGCACCAAGACTTGGCCTCAACTAAGTTCCGGCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLTQLRVKLWSHFFF*TLHQDLASTKFRRF Trigger: GAACCGCCGGAACTTAGTTGAGGCCAAGTCTTGGTGCAAAGTCAAGAAGAAGAAGTGCGACCACAACTTCACCCGGAGCTGGGTGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
||
| CDS CAA 90 bp | GCCTGTCACAGGGGTTGGTGTGGTGGTCCCTGGATACACTTCCAGTaGGAAACCCACCAAAGGGTAGAAATGCCCAGCCGTGTTACGCAT | + |
|
Preference number: 6 (lower is better) Translates to: ACHRGWCGGPWIHFQ*ETHQRVEMPSRVTH Trigger: ATGCGTAACACGGCTGGGCATTTCTACCCTTTGGTGGGTTTCCAACTGGAAGTGTATCCAGGGACCACCACACCAACCCCTGTGACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
||
| CDS CCA 72 bp | CTTCACGCCGCCACACTTTCCTGTACAGGTTCTCATTaGAGTGACCTGAGACACAGCCCTGTAGCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LHAATLSCTGSH*SDLRHSPVATA Trigger: TGCTGTGGCTACAGGGCTGTGTCTCAGGTCACTCCAATGAGAACCTGTACAGGAAAGTGTGGCGGCGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS CCA 72 bp | AAGGATCTTGCATTGCTAGGAGACAGGGTTGCGGGCTaGGACTCTGTGTTCCTCTCAGGCTCTGTAACGGTG | + |
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Preference number: 6 (lower is better) Translates to: KDLALLGDRVAG*DSVFLSGSVTV Trigger: CACCGTTACAGAGCCTGAGAGGAACACAGAGTCCCAGCCCGCAACCCTGTCTCCTAGCAATGCAAGATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS CAA 72 bp | AGGGGTTGGTGTGGTGGTCCCTGGATACACTTCCAGTaGGAAACCCACCAAAGGGTAGAAATGCCCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: RGWCGGPWIHFQ*ETHQRVEMPSR Trigger: ACGGCTGGGCATTTCTACCCTTTGGTGGGTTTCCAACTGGAAGTGTATCCAGGGACCACCACACCAACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS GCA 72 bp | CTTCCAAAACCCGTAGGCTACGACCAACACCACAGGTaGTGGAAGAAATGTCAACACCACCACCATCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LPKPVGYDQHHR*WKKCQHHHHRR Trigger: CCTGCGATGGTGGTGGTGTTGACATTTCTTCCAGCACCTGTGGTGTTGGTCGTAGCCTACGGGTTTTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS CCA 72 bp | CCAAAACCCGTAGGCTACGACCAACACCACAGGTGCTaGAAGAAATGTCAACACCACCACCATCGCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PKPVGYDQHHRC*KKCQHHHHRRD Trigger: ATCCCTGCGATGGTGGTGGTGTTGACATTTCTTCCAGCACCTGTGGTGTTGGTCGTAGCCTACGGGTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS CCA 72 bp | GCTACTCTGGTGTCTGGACATGGTGGAGGTGGTCACTaGATCAGCAGAGAAGGATCTTGCATTGCTAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: ATLVSGHGGGGH*ISREGSCIARR Trigger: TCTCCTAGCAATGCAAGATCCTTCTCTGCTGATCCAGTGACCACCTCCACCATGTCCAGACACCAGAGTAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS CCA 72 bp | ACAAGCTGCTACTCTGGTGTCTGGACATGGTGGAGGTaGTCACTGGATCAGCAGAGAAGGATCTTGCATTGC | + |
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Preference number: 6 (lower is better) Translates to: TSCYSGVWTWWR*SLDQQRRILHC Trigger: GCAATGCAAGATCCTTCTCTGCTGATCCAGTGACCACCTCCACCATGTCCAGACACCAGAGTAGCAGCTTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS CAA 72 bp | CGGGTGAAGTTGTGGTCGCACTTCTTCTTCTTGACTTaGCACCAAGACTTGGCCTCAACTAAGTTCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RVKLWSHFFFLT*HQDLASTKFRR Trigger: CCGCCGGAACTTAGTTGAGGCCAAGTCTTGGTGCAAAGTCAAGAAGAAGAAGTGCGACCACAACTTCACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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| CDS CAA 90 bp | GTGGGGAACGTTTCTCTCAGTTGTGAGGGCTGGATACACTTCCAGTaGGAAACCCACCAAAGGGTAGAAATGCCCAGCCGTGTTACGCAT | + |
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Preference number: 6 (lower is better) Translates to: VGNVSLSCEGWIHFQ*ETHQRVEMPSRVTH Trigger: ATGCGTAACACGGCTGGGCATTTCTACCCTTTGGTGGGTTTCCAACTGGAAGTGTATCCAGCCCTCACAACTGAGAGAAACGTTCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
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| CDS CCA 72 bp | ACTGGTATCGATGAAACTGTAGCCTGTCACAGGGGTTaGTGTGGTGGTCCCTGGATACACTTCCAGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TGIDETVACHRG*CGGPWIHFQLE Trigger: TTCCAACTGGAAGTGTATCCAGGGACCACCACACCAACCCCTGTGACAGGCTACAGTTTCATCGATACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170941.3 |
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| CDS CAA 72 bp | GTTTCTCTCAGTTGTGAGGGCTGGATACACTTCCAGTaGGAAACCCACCAAAGGGTAGAAATGCCCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: VSLSCEGWIHFQ*ETHQRVEMPSR Trigger: ACGGCTGGGCATTTCTACCCTTTGGTGGGTTTCCAACTGGAAGTGTATCCAGCCCTCACAACTGAGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
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| CDS CAA 72 bp | ACTTGGCCGGTCGTGACAAATCCATCCATGGGGGTGTaGGTAAGATGTGTGTGGGGAACGTTTCTCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: TWPVVTNPSMGV*VRCVWGTFLSV Trigger: AACTGAGAGAAACGTTCCCCACACACATCTTACCAACACCCCCATGGATGGATTTGTCACGACCGGCCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
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| CDS TCA 72 bp | CATAGTCACGTCAGATGTGAAAGGAGCGTGAGGGTCTaGAATATGGACTTGGCCGGTCGTGACAAATCCATC | + |
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Preference number: 6 (lower is better) Translates to: HSHVRCERSVRV*NMDLAGRDKSI Trigger: GATGGATTTGTCACGACCGGCCAAGTCCATATTTCAGACCCTCACGCTCCTTTCACATCTGACGTGACTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
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| CDS CCA 72 bp | ATGTGTGTGGGGAACGTTTCTCTCAGTTGTGAGGGCTaGATACACTTCCAGTTGGAAACCCACCAAAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: MCVGNVSLSCEG*IHFQLETHQRV Trigger: TACCCTTTGGTGGGTTTCCAACTGGAAGTGTATCCAGCCCTCACAACTGAGAGAAACGTTCCCCACACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233092.2 |
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| CDS CAA 72 bp | CAGCTCCGGGTGAAGTTGTGGTCGCACTTCTTCTTCTaGACTTTGCACCAAGACTTGGCCTCAACTAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: QLRVKLWSHFFF*TLHQDLASTKF Trigger: GAACTTAGTTGAGGCCAAGTCTTGGTGCAAAGTCAAGAAGAAGAAGTGCGACCACAACTTCACCCGGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170941.3 ENSMUST00000233092.2 |
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